RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163803

Ensembl transcript IDs: ENST00000327757.10, ENST00000404858.5, ENST00000411743.5, ENST00000416713.5, ENST00000422425.6, ENST00000436544.1, ENST00000436775.1, ENST00000444257.5, ENST00000473272.1, ENST00000479065.5, ENST00000481449.1, ENST00000485642.1

Found 1240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGGGCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCTAGAGGGCCACAGTGCGCAGGCTCA +
Preference number: 1 (lower is better)
Translates to: LGQRAVKRVAIGSLG*GPTPGPRGPQCAGS
Trigger: TGAGCCTGCGCACTGTGGCCCTCTAGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR GCA 90 bp CCAGACCACTGTCCCGATGATGCCCACCACAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGC +
Preference number: 1 (lower is better)
Translates to: PDHCPDDAHHKADSR*HWDSPVEHLGGFFS
Trigger: GCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CCA 90 bp CACTGTCCCGATGATGCCCACCACAAGGCCGACTCCCGCTGCCACTaGGACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTC +
Preference number: 1 (lower is better)
Translates to: HCPDDAHHKADSRCH*DSPVEHLGGFFSLV
Trigger: GACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTTGTGGTGGGCATCATCGGGACAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR GCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTaGTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCT +
Preference number: 1 (lower is better)
Translates to: VAGSLGSGWSWLGQP*WRQATKSGSSHTWA
Trigger: AGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 90 bp GCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTaGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCA +
Preference number: 1 (lower is better)
Translates to: AGSLGSGWSWLGQPC*RQATKSGSSHTWAA
Trigger: TGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 90 bp CGTTGTGGGTGGTACAGGCCGAGTGATGGCGCCTCCCTCTCGCCCTaGAAACCCATCCTCTCTGGGACTCTGCTCAGGTCTGGCCAGAGA +
Preference number: 1 (lower is better)
Translates to: RCGWYRPSDGASLSP*KPILSGTLLRSGQR
Trigger: TCTCTGGCCAGACCTGAGCAGAGTCCCAGAGAGGATGGGTTTCCAGGGCGAGAGGGAGGCGCCATCACTCGGCCTGTACCACCCACAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 90 bp TATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTaGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCA +
Preference number: 1 (lower is better)
Translates to: YARGGRQFGLWLVVA*AALLEAGHKKWQLP
Trigger: TGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 90 bp TGGGACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCTC +
Preference number: 1 (lower is better)
Translates to: WDSPVEHLGGFFSLV*EQSAVPQGVEVRAL
Trigger: GAGAGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CCA 90 bp AGTGGGTTTGGTGACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTaGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: SGFGDLRICSWWQAV*ALVGRGLGSPAGGR
Trigger: CCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTCACCAAACCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 90 bp CCTCTCGCCCTGGAAACCCATCCTCTCTGGGACTCTGCTCAGGTCTaGCCAGAGAACCTTCACAGTCTTGATCACCCCCTCCCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: PLALETHPLWDSAQV*PENLHSLDHPLPAP
Trigger: GGGAGCAGGGAGGGGGTGATCAAGACTGTGAAGGTTCTCTGGCCAGACCTGAGCAGAGTCCCAGAGAGGATGGGTTTCCAGGGCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTaGCTGGGGCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTA +
Preference number: 1 (lower is better)
Translates to: LPMAPGIEACPGGRE*LGQRAVKRVAIGSL
Trigger: TAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
3UTR GCA 90 bp GCGGCAGCAAAGGTGCTGTCCTGGCTCCGCCACTCATTAGCACGCTaGCCCCTTGTGGCCAGCTTCGTTCTAGTTGTTTTCCCAGGTAAA +
Preference number: 1 (lower is better)
Translates to: AAAKVLSWLRHSLAR*PLVASFVLVVFPGK
Trigger: TTTACCTGGGAAAACAACTAGAACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAGCACCTTTGCTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR TCA 90 bp CATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTCGGAGAAGAAGGTGAGGTCAGTGTC +
Preference number: 1 (lower is better)
Translates to: HVVPECDGHLGMPAV*EVKTVLGEEGEVSV
Trigger: GACACTGACCTCACCTTCTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR TCA 90 bp AGAAACTTGAGAATATCTACACGCAACCGCTCGCCTGACACACCCTaGGCTTCTCCACTTCCGTGTTCGGGATGCCCTTTCTCACCCTTT +
Preference number: 1 (lower is better)
Translates to: RNLRISTRNRSPDTP*ASPLPCSGCPFSPF
Trigger: AAAGGGTGAGAAAGGGCATCCCGAACACGGAAGTGGAGAAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATATTCTCAAGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR TCA 90 bp AAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTaGGTGCTTCACGCAGGCAAACCCAGGAATAAAATAGCTTTGGAC +
Preference number: 1 (lower is better)
Translates to: KKWQLPHLGCTRDGR*VLHAGKPRNKIALD
Trigger: GTCCAAAGCTATTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 90 bp AAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGCTaGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGG +
Preference number: 1 (lower is better)
Translates to: KGNALKTLGPSTLLS*PKLEPFTTESHRSR
Trigger: CCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGCTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 90 bp TTAGTAGAGGACTGCTGGTTCATATCTGAATCCCAGGAGCCCAGCTaGTCGATCTGTTTTAAAGTAGGGCACATCACCTCACTTCCCCAG +
Preference number: 1 (lower is better)
Translates to: LVEDCWFISESQEPS*SICFKVGHITSLPQ
Trigger: CTGGGGAAGTGAGGTGATGTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAACCAGCAGTCCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 90 bp GCTGAATTTTCCCATCGCTGCAGAAAGAAACTTTTAGTAGAGGACTaGTGGTTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGT +
Preference number: 1 (lower is better)
Translates to: AEFSHRCRKKLLVED*WFISESQEPSWSIC
Trigger: ACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAACCAGCAGTCCTCTACTAAAAGTTTCTTTCTGCAGCGATGGGAAAATTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 90 bp TTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTaGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCA +
Preference number: 1 (lower is better)
Translates to: LPTDALVVTHHHVAS*LLKEFDLSARLRHA
Trigger: TGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR TCA 90 bp AGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTCGTCTGCTTaGTTTTTGTTTCCCATGCTATCGTATGAGGTCATTGCCTTCTTT +
Preference number: 1 (lower is better)
Translates to: RCTSRIYHLQCGSSA*FLFPMLSYEVIAFF
Trigger: AAAGAAGGCAATGACCTCATACGATAGCATGGGAAACAAAAATCAAGCAGACGAACCACATTGCAGGTGATAGATACGCGACGTGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 90 bp AATGGTCCCAAACAAGCGAACTTATTTCAATGGAAGAAAAGGCAATaGTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGCTGGCCAAA +
Preference number: 1 (lower is better)
Translates to: NGPKQANLFQWKKRQ*SQDLGAQHIVKLAK
Trigger: TTTGGCCAGCTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAATAAGTTCGCTTGTTTGGGACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 90 bp ATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTaGACTGAATGGCAACCAGCCAGCTCCAAAATTCCAGCCACCACC +
Preference number: 1 (lower is better)
Translates to: IVLDTKQLLNRYVLD*TEWQPASSKIPATT
Trigger: GGTGGTGGCTGGAATTTTGGAGCTGGCTGGTTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 90 bp GAATTTTCCCATCGCTGCAGAAAGAAACTTTTAGTAGAGGACTGCTaGTTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTT +
Preference number: 1 (lower is better)
Translates to: EFSHRCRKKLLVEDC*FISESQEPSWSICF
Trigger: AAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAACCAGCAGTCCTCTACTAAAAGTTTCTTTCTGCAGCGATGGGAAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR TCA 90 bp TTGAAGCCTACAGGAATGAGAACTTTATTAGGAGAGAAAGAAACTTaGGAATATCTACACGCAACCGCTCGCCTGACACACCCTGAGCTT +
Preference number: 1 (lower is better)
Translates to: LKPTGMRTLLGEKET*EYLHATARLTHPEL
Trigger: AAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATATTCTCAAGTTTCTTTCTCTCCTAATAAAGTTCTCATTCCTGTAGGCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 90 bp ACATGGCTGATTGTGATTGTGTCTTGGTTATGGCCTCTCGAAGTGTaGGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGTACATATATG +
Preference number: 1 (lower is better)
Translates to: TWLIVIVSWLWPLEV*DGFQRFSVQMCTYM
Trigger: CATATATGTACACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACAATCACAATCAGCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 90 bp TATCGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTaGCAGAACCTCATGCTCTTTCCTGATTGTAATAAGCTCTGCTTT +
Preference number: 1 (lower is better)
Translates to: YRMRSLPSLAETKCS*QNLMLFPDCNKLCF
Trigger: AAAGCAGAGCTTATTACAATCAGGAAAGAGCATGAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 90 bp TCTATCACCTGCAATGTGGTTCGTCTGCTTGATTTTTGTTTCCCATaGTATCGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGC +
Preference number: 1 (lower is better)
Translates to: SITCNVVRLLDFCFP*YRMRSLPSLAETKC
Trigger: GCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACGATAGCATGGGAAACAAAAATCAAGCAGACGAACCACATTGCAGGTGATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 90 bp GCTGATTGTGATTGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATaGGTTTCAGAGGTTTTCTGTGCAGATGTGTACATATATGTAAAG +
Preference number: 1 (lower is better)
Translates to: ADCDCVLVMASRSVR*VSEVFCADVYIYVK
Trigger: CTTTACATATATGTACACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACAATCACAATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGTCCCAGGCCTGGGCTaGCATGTCCCTAGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGVPGLG*HVPSSG
Trigger: GCCAGAGCTAGGGACATGCCAGCCCAGGCCTGGGAC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CCA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTTCCCGCCTTGGCCCTaGTACAGGCTAGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCFPPWP*YRLASS
Trigger: GGAGCTGGCTAGCCTGTACCAGGGCCAAGGCGGGAA...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR TCA 90 bp GGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTGGCCCCAAGAAGTTGTaGCTGTCCCCTGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: GLLQPGLGAIGCSAGCRGGPKKL*LSPGLP
Trigger: AGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCC...ACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTaGGCTGCACAAGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSGSSHT*AAQEME
Trigger: TTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCC...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGGCAGTTTGGGCTCTaGTTGGTCGTGGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGRQFGL*LVVAWA
Trigger: TGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp CCCACCCCCGGGCCTAGAGGGCCACAGTGCGCAGGCTCATTGGAGGATCTTCCCATGTGGGTAGGTCACTaGAGTTGTTTGGTCGAGCTC +
Preference number: 2 (lower is better)
Translates to: PTPGPRGPQCAGSLEDLPMWVGH*SCLVEL
Trigger: GAGCTCGACCAAACAACTCCAGTGACCTACCCACAT...GGGAAGATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGGCCCGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR TCA 90 bp CTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: LVPACCSRVRWPSRHARGYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...ACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCG +
Preference number: 2 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGFFSLV*EQSAVP
Trigger: CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CAA 90 bp GCTCCCACTGCTGTAGTCAGAGAGTCACCCAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGCTGGTGGACAGAGGTTGGAACACTA +
Preference number: 2 (lower is better)
Translates to: APTAVVRESPRAATT*MSAGRSWWTEVGTL
Trigger: TAGTGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCTGGGTGACTCTCTGACTACAGCAGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR TCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCATATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: SSHTWAAQEMEGECFTQAYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR GCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTTCCTCTCTGGGACTCTaGTCAGGTCTGGCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: PQAAPPGARRVSITCNVVSSLGL*SGLARE
Trigger: TTCTCTGGCCAGACCTGAGCAGAGTCCCAGAGAGGA...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp GTGCGATGGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAAAACAGTCCTCGGCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 2 (lower is better)
Translates to: VRWPSRHARGLRSENSPRPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...CCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CAA 90 bp GACGAAAGCCCTTGGGAGCTCCTCAGAGAGGATGTCCAGGGCCTGTaGGATGTGCTGAACATATTCCGTGGCCAAGTGGGCCTCCGGATT +
Preference number: 2 (lower is better)
Translates to: DESPWELLREDVQGL*DVLNIFRGQVGLRI
Trigger: AATCCGGAGGCCCACTTGGCCACGGAATATGTTCAGCACATCCAACAGGCCCTGGACATCCTCTCTGAGGAGCTCCCAAGGGCTTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR GCA 90 bp GGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTCCCATCCCCTCCAATaGTCCAAGAGAGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GEGHLSLARLWVKLLEVVSHPLQ*SKRVPS
Trigger: GGAGGGGACTCTCTTGGAGCATTGGAGGGGATGGGA...GACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR GCA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 2 (lower is better)
Translates to: DLRICSWWQAVWALVGRGPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp TTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 2 (lower is better)
Translates to: FSLVWEQSAVPQGVEVRAPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...AGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CCA 90 bp TTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGTTGTGACTGTCCCCTaGGCTTCCTATGGCACCAGG +
Preference number: 2 (lower is better)
Translates to: FFSLVWEQSAVPQGVEVRVVTVP*ASYGTR
Trigger: CCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAAC...CCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CCA 90 bp GTCTTGCGGCCCACTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGTCTGCTGGTCGGAGCTaGTGGACAGAGGTTGGAACA +
Preference number: 2 (lower is better)
Translates to: VLRPTGSSMLFQSAMAISSAGRS*WTEVGT
Trigger: TGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGA...CGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAGTGGGCCGCAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CCA 90 bp AGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCTCGCCAGTAGGAGAAACTaGAGATGCCATGCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: SLVWEQSAVPQGVEVRALASRRN*RCHAGG
Trigger: ACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGC...GAGAGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CAA 90 bp TCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTaGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: SGEGHLSLARLWVKL*EVVLRPTGSSMLFQ
Trigger: CTGGAACAACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CAA 90 bp CTCTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTaGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTGTTC +
Preference number: 2 (lower is better)
Translates to: LSGEGHLSLARLWVK*LEVVLRPTGSSMLF
Trigger: GAACAACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR TCA 90 bp AGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCTCTCTCAATGGCTGGCTTaGTGGGGTACGTGTAGTTAC +
Preference number: 2 (lower is better)
Translates to: SLVWEQSAVPQGVEVRALSQWLA*WGTCSY
Trigger: GTAACTACACGTACCCCATCAAGCCAGCCATTGAGA...GAGAGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR GCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGAGATGGAAGGTGAGTaGTTCACGCAGGCAAACCCA +
Preference number: 2 (lower is better)
Translates to: DLRICSWWQAVWALVGRGEMEGE*FTQANP
Trigger: TGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR GCA 90 bp CTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGCACCACTTTGATGTCTaGTGGTCGGAGCTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: LLQPGLGAIGCSAGCRGKHHFDV*WSELVD
Trigger: GTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTG...CTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR GCA 90 bp AGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCTCAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 2 (lower is better)
Translates to: SLVWEQSAVPQGVEVRALRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...GAGAGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR GCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGCACTCATTAGCACGCTaGCCCCTTGTGGCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALHSLAR*PLVASF
Trigger: GAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTG...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR GCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGCAGCCGAGCCTCTTCTaGAGGTCCTGTTCACAGCCA +
Preference number: 2 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALQPSLF*RSCSQP
Trigger: TGGCTGTGAACAGGACCTGCAGAAGAGGCTCGGCTG...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp GTGCGATGGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAAAACAGTCCTCGGCCAGTTCTCAATGGCTaGCTTGATGGGGTACGTGTA +
Preference number: 2 (lower is better)
Translates to: VRWPSRHARGLRSENSPRPVLNG*LDGVRV
Trigger: TACACGTACCCCATCAAGCCAGCCATTGAGAACTGG...CCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR CAA 90 bp ATGCTCCAAGAGAGTCCCCTCCAAGATGTGGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACTGCTGTAGTCAGAGAGTCACCCAGG +
Preference number: 2 (lower is better)
Translates to: MLQESPLQDVGRSLE*FGRAPTAVVRESPR
Trigger: CCTGGGTGACTCTCTGACTACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACCTACCCACATCTTGGAGGGGACTCTCTTGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR CAA 90 bp GGTGAGGTCAGTGTCCCCTCTCTCGTTCAGTGGGGTGAGTGTGTTTaGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGT +
Preference number: 2 (lower is better)
Translates to: GEVSVPSLVQWGECV*EERLHHNRKVLTLC
Trigger: ACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCACTGAACGAGAGAGGGGACACTGACCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR TCA 90 bp GGTGAGTGTGTTTTGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: GECVLEERLHHNRKVLTLYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...CAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAACACACTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR TCA 90 bp TTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGCAAGTGCAGTTGTTCTaGGCTGCCAGCATGGCACAT +
Preference number: 2 (lower is better)
Translates to: FFSLVWEQSAVPQGVEVRQVQLF*AASMAH
Trigger: ATGTGCCATGCTGGCAGCTCAGAACAACTGCACTTG...CCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR TCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTTTCCCAGGTAAATTCTaGGCTACTCGCCACTTACTT +
Preference number: 2 (lower is better)
Translates to: LSWLRHSLARCPLVASFVFPGKF*ATRHLL
Trigger: AAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAA...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGAGTTTGGGCTCTGGTTaGTCGTGGCTTGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQSLGSG*SWLGQP
Trigger: GGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACT...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCCTGGTGGACAGAGGTTaGAACACTATTGGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSLVDRG*NTIGSL
Trigger: AAGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAG...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CCA 90 bp CTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACGTCCCCTCCAAGATGTaGGTAGGTCACTGGAGTTGT +
Preference number: 2 (lower is better)
Translates to: LEFGSAVGEVVGGSLAAHVPSKM*VGHWSC
Trigger: ACAACTCCAGTGACCTACCCACATCTTGGAGGGGAC...GTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCACTTCTTCAGAATGTTaGGCAGTGTGGTGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGTSSEC*AVWCES
Trigger: AGACTCACACCACACTGCCCAACATTCTGAAGAAGT...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR TCA 90 bp GCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTCAAGTGCAGTTGTTCTaGGCTGCCAGCATGGCACAT +
Preference number: 2 (lower is better)
Translates to: AVGEVVGGSLAAHWFQHVQVQLF*AASMAH
Trigger: ATGTGCCATGCTGGCAGCTCAGAACAACTGCACTTG...AACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CCA 90 bp TTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGCTGGAGATGCCATGCTaGAGGTTCCAGTTCACTTTC +
Preference number: 2 (lower is better)
Translates to: FFSLVWEQSAVPQGVEVRLEMPC*RFQFTF
Trigger: GAAAGTGAACTGGAACCTCCAGCATGGCATCTCCAG...CCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CCA 90 bp TTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGCCCTCTCTCGTTCAGTaGGGTGAGTGTGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: FFSLVWEQSAVPQGVEVRPSLVQ*GECVLE
Trigger: TTCCAAAACACACTCACCCCACTGAACGAGAGAGGG...CCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CAA 90 bp GAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATaGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCCA +
Preference number: 2 (lower is better)
Translates to: EERLHHNRKVLTLCV*VPVGETGDAMLEVP
Trigger: TGGAACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR GCA 90 bp CTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTTTTTGGAAGAAAGGCTaGACCACAACCGCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: LRRGALEFGSAVGEVVGGFWKKG*TTTAKS
Trigger: GGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAA...ACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR GCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTGCTGCCAGAACCTCATaGTCTTTCCTGATTGTAATA +
Preference number: 2 (lower is better)
Translates to: PQAAPPGARRVSITCNVVAARTS*SFLIVI
Trigger: TATTACAATCAGGAAAGAGCATGAGGTTCTGGCAGC...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR GCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGTTAGCTGAGACCAAGTaGAGCTGCCAGAACCTCATG +
Preference number: 2 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALLAETK*SCQNLM
Trigger: CATGAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAA...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCGCAAAGGTGCTGTCCTaGCTCCGCCACTCATTAGCA +
Preference number: 2 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLAKVLS*LRHSLA
Trigger: TGCTAATGAGTGGCGGAGCCAGGACAGCACCTTTGC...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCGAAACCCATCCTCTCTaGGACTCTGCTCAGGTCTGG +
Preference number: 2 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLETHPL*DSAQVW
Trigger: CCAGACCTGAGCAGAGTCCCAGAGAGGATGGGTTTC...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR TCA 90 bp CTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTCAAGGAGGTAAGGGTTaGACTTCTTCAGAATGTTGG +
Preference number: 2 (lower is better)
Translates to: LRRGALEFGSAVGEVVGGQGGKG*TSSECW
Trigger: CCAACATTCTGAAGAAGTTCAACCCTTACCTCCTTG...ACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR TCA 90 bp GCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTTCTCGTTCAGTGGGGTaGGTGTGTTTTGGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: AVGEVVGGSLAAHWFQHVSRSVG*VCFGRK
Trigger: CTTTCTTCCAAAACACACTCACCCCACTGAACGAGA...AACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR TCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGTGGTACAGGCCGAGTaGTGGCGCCTCCCTCTCGCC +
Preference number: 2 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHVVQAE*WRLPLA
Trigger: GGCGAGAGGGAGGCGCCATCACTCGGCCTGTACCAC...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR GCA 90 bp CTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGGTGCCAGTAGGAGAATACACAGGAAGTCACTaGCCCAGTTCTCAATGGCTG +
Preference number: 2 (lower is better)
Translates to: LHHNRKVLTLCVLVPVGEYTGSH*PSSQWL
Trigger: CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTA...TTCTCCTACTGGCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR GCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGCGCGTATCTATCACCTaGAATGTGGTTCGTCTGCTT +
Preference number: 2 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALRVSIT*NVVRLL
Trigger: AAGCAGACGAACCACATTGCAGGTGATAGATACGCG...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGTCCCAGGAGCCCAGCTaGTCGATCTGTTTTAAAGTA +
Preference number: 2 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALSQEPS*SICFKV
Trigger: TACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGA...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR TCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGACAAGAGATGGAAGGTaGGTGCTTCACGCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQTRDGR*VLHAGK
Trigger: TTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGT...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR GCA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCTGGCCTCTCGAAGTGTaGGATGGGTTTCAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLWPLEV*DGFQRF
Trigger: AAACCTCTGAAACCCATCGCACACTTCGAGAGGCCA...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 90 bp ACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTATaGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: TDALVVTHHHVASWL*KEFDLSARLRHAQP
Trigger: AGGCTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGGTTGTGACTGTCCCCTaGGCTTCCTATGGCACCAGG +
Preference number: 2 (lower is better)
Translates to: THLPTDALVVTHHHVASWVVTVP*ASYGTR
Trigger: CCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAAC...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAGGCTCTGGTTGGTCGTaGCTTGGGCAGCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQGSGWS*LGQPCW
Trigger: CCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CAA 90 bp AATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATaGTTAAGCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCAC +
Preference number: 2 (lower is better)
Translates to: NGRKGNALKTLGPST*LSWPKLEPFTTESH
Trigger: GTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGCTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR TCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTGGCAGCTCCCACACCTaGGCTGCACAAGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCGSSHT*AAQEME
Trigger: TTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCC...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTAAGGCAGTTTGGGCTCTaGTTGGTCGTGGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: HLPTDALVVTHHHVASWLRQFGL*LVVAWA
Trigger: TGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCT...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR TCA 90 bp CAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGAAACAGAGCAATGGCTaGATTTTCCCATCGCTGCAG +
Preference number: 2 (lower is better)
Translates to: QWKKRQCSQDLGAQHIVKKQSNG*IFPSLQ
Trigger: CTGCAGCGATGGGAAAATTCAGCCATTGCTCTGTTT...CTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR GCA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGCTTCCGTGTTCGGGATaGCCTTTCTCACCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: LFSQVNSELLATYFEAYRLPCSG*PFSPFP
Trigger: AGGAAAGGGTGAGAAAGGGCATCCCGAACACGGAAG...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTGGGCTGCACAAGAGATaGAAGGTGAGTGCTTCACGC +
Preference number: 2 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCGLHKR*KVSASR
Trigger: GCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCC...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CAA 90 bp GTTCGTCTGCTTGATTTTTGTTTCCCATGCTATCGTATGAGGTCATaGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCATG +
Preference number: 2 (lower is better)
Translates to: VRLLDFCFPCYRMRS*PSLAETKCSCQNLM
Trigger: CATGAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACGATAGCATGGGAAACAAAAATCAAGCAGACGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR GCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTAGGTGACTTGAGGATATaGTCGTGGTGGCAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: HLPTDALVVTHHHVASWLGDLRI*SWWQAV
Trigger: AACTGCCTGCCACCACGAGCATATCCTCAAGTCACC...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR GCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTGTGTACACGTATACATaGAAGCGGGGAGGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCVYTYT*KRGGED
Trigger: ATCTTCACCTCCCCGCTTGCATGTATACGTGTACAC...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTATTGAGGATATGCTCGTaGTGGCAGGCAGTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: HLPTDALVVTHHHVASWLLRICS*WQAVWA
Trigger: AGCCCAAACTGCCTGCCACCACGAGCATATCCTCAA...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CAA 90 bp CTTCCGTGTTCGGGATGCCCTTTCTCACCCTTTCCTCTTGTCGAATaGCTAATCTTTCAAGACATGGCTGATTGTGATTGTGTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: LPCSGCPFSPFPLVE*LIFQDMADCDCVLV
Trigger: AACCAAGACACAATCACAATCAGCCATGTCTTGAAAGATTAGCAATTCGACAAGAGGAAAGGGTGAGAAAGGGCATCCCGAACACGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR TCA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACAATTGCCTTCTTTAGCTaGGACCAAGTGCAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTIAFFS*DQVQLP
Trigger: TGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAAT...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTCTCGAAGTGTGCGATaGGTTTCAGAGGTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCSRSVR*VSEVFC
Trigger: ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGA...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 90 bp GTCGAATTGCTAATCTTTCAAGACATGGCTGATTGTGATTGTGTCTaGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: VELLIFQDMADCDCV*VMASRSVRWVSEVF
Trigger: GAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACAATCACAATCAGCCATGTCTTGAAAGATTAGCAATTCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR TCA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACACTGTTCTTGAGAGGTTaGTGTCCTCATGCTAAGGAC +
Preference number: 2 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTLFLRG*CPHAKD
Trigger: GTCCTTAGCATGAGGACATCAACCTCTCAAGAACAG...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR TCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATTTAGGACCAGGTACCTaGCCAAGGACTTGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHLGPGT*PRTCGN
Trigger: GTTTCCACAAGTCCTTGGTCAGGTACCTGGTCCTAA...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTATTGGATTGGACTGAATaGCAACCAGCCAGCTCCAAA +
Preference number: 2 (lower is better)
Translates to: HLPTDALVVTHHHVASWLLDWTE*QPASSK
Trigger: TTTGGAGCTGGCTGGTTGCCATTCAGTCCAATCCAA...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR GCA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACGATTTTTGTTTCCCATaGTATCGTATGAGGTCATTG +
Preference number: 2 (lower is better)
Translates to: FISESQEPSWSICFKVGHDFCFP*YRMRSL
Trigger: CAATGACCTCATACGATAGCATGGGAAACAAAAATC...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CCA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGATTGTGATTGTGTCTTaGTTATGGCCTCTCGAAGTG +
Preference number: 2 (lower is better)
Translates to: LFSQVNSELLATYFEAYRIVIVS*LWPLEV
Trigger: CACTTCGAGAGGCCATAACCAAGACACAATCACAAT...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 72 bp TGTCCCGATGATGCCCACCACAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTAGAGCACCTCGGGGGC +
Preference number: 3 (lower is better)
Translates to: CPDDAHHKADSR*HWDSPVEHLGG
Trigger: GCCCCCGAGGTGCTCTACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTTGTGGTGGGCATCATCGGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CAA 90 bp CCACCCCCGGGCCTAGAGGGCCACAGTGCGCAGGCTCATTGGAGGATCTTCCCTAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGC +
Preference number: 3 (lower is better)
Translates to: PPPGLEGHSAQAHWRIFPRAATT*MSAGRS
Trigger: GCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCT...AGGGAAGATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGGCCCGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR CCA 72 bp GATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTaGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: DMLVVAGSLGSG*SWLGQPCWRQA
Trigger: GGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 72 bp GATGATGCCCACCACAAGGCCGACTCCCGCTGCCACTaGGACAGCCCAGTAGAGCACCTCGGGGGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: DDAHHKADSRCH*DSPVEHLGGFF
Trigger: GAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTTGTGGTGGGCATCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR TCA 72 bp GTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCA +
Preference number: 3 (lower is better)
Translates to: VTVPWASYGTRH*SMSWWPGVAGA
Trigger: TGCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
3UTR TCA 72 bp AGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCTAGAGGGCCACAGTGC +
Preference number: 3 (lower is better)
Translates to: RAVKRVAIGSLG*GPTPGPRGPQC
Trigger: GCACTGTGGCCCTCTAGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CCA 72 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTaGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACC +
Preference number: 3 (lower is better)
Translates to: LGSGWSWLGQPC*RQATKSGSSHT
Trigger: GGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 72 bp GGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTaGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGG +
Preference number: 3 (lower is better)
Translates to: GGRQFGLWLVVA*AALLEAGHKKW
Trigger: CCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGGCACATTTCCCGCCTaGGCCCTGGTACAGGCTAGC +
Preference number: 3 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGGTFPA*ALVQAS
Trigger: GCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGCC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CAA 90 bp CCACTGGGACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGACTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: PLGQPSRAPRGLLQPGLGLWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...TCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTCCCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR TCA 72 bp CAACCTAGGTCCTCGTTGTGGGTGGTACAGGCCGAGTaGTGGCGCCTCCCTCTCGCCCTGGAAACCCATCCT +
Preference number: 3 (lower is better)
Translates to: QPRSSLWVVQAE*WRLPLALETHP
Trigger: AGGATGGGTTTCCAGGGCGAGAGGGAGGCGCCATCACTCGGCCTGTACCACCCACAACGAGGACCTAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp TGGTACAGGCCGAGTGATGGCGCCTCCCTCTCGCCCTaGAAACCCATCCTCTCTGGGACTCTGCTCAGGTCT +
Preference number: 3 (lower is better)
Translates to: WYRPSDGASLSP*KPILSGTLLRS
Trigger: AGACCTGAGCAGAGTCCCAGAGAGGATGGGTTTCCAGGGCGAGAGGGAGGCGCCATCACTCGGCCTGTACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp CCTCATGCTAAGGACAACCTAGGTCCTCGTTGTGGGTaGTACAGGCCGAGTGATGGCGCCTCCCTCTCGCCC +
Preference number: 3 (lower is better)
Translates to: PHAKDNLGPRCG*YRPSDGASLSP
Trigger: GGGCGAGAGGGAGGCGCCATCACTCGGCCTGTACCACCCACAACGAGGACCTAGGTTGTCCTTAGCATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CAA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTCTGTGGGTGAAGTTGTaGGAGGTAGTCTTGCGGCCC +
Preference number: 3 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCLWVKL*EVVLRP
Trigger: GGGCCGCAAGACTACCTCCAACAACTTCACCCACAG...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CCA 72 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: APRSCDCPLGFL*HQALKHVLVAG
Trigger: CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
3UTR CCA 72 bp GGTGACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTaGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCT +
Preference number: 3 (lower is better)
Translates to: GDLRICSWWQAV*ALVGRGLGSPA
Trigger: AGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 72 bp CCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTA +
Preference number: 3 (lower is better)
Translates to: PVEHLGGFFSLV*EQSAVPQGVEV
Trigger: TACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CCA 72 bp GGCCCACTGGTTCCAGCATGTTGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAA +
Preference number: 3 (lower is better)
Translates to: GPLVPACCSRVR*PSRHARGLRSE
Trigger: TTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CAA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDLWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CAA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCACTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: SSHTWAAQEMEGECFTQALWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CAA 90 bp TTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: FSLVWEQSAVPQGVEVRALWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...AGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CAA 90 bp CCACCTCTCCTGCACCTCCAGACCACTGTCCCGATGATGCCCACCACAAGGCCGCAGTCTTTCTCCAGGTaGATGTCGGGGCTGTTTTTC +
Preference number: 3 (lower is better)
Translates to: PPLLHLQTTVPMMPTTRPQSFSR*MSGLFF
Trigger: GAAAAACAGCCCCGACATCAACCTGGAGAAAGACTG...CGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCTGGAGGTGCAGGAGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CAA 90 bp GGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGGTCACTGGAGTTGTTaGGTCGAGCTCCCACTGCTG +
Preference number: 3 (lower is better)
Translates to: GALEFGSAVGEVVGGSLAGHWSC*VELPLL
Trigger: CAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACC...CGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR TCA 72 bp CCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTCGGAGAAGAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: PECDGHLGMPAV*EVKTVLGEEGE
Trigger: CTCACCTTCTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCACTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CCA 72 bp CTCTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTaGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACT +
Preference number: 3 (lower is better)
Translates to: LSGEGHLSLARL*VKLLEVVLRPT
Trigger: AGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR-3UTR CAA 90 bp CTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACT +
Preference number: 3 (lower is better)
Translates to: LRRGALEFGSAVGEVVGGGRSLE*FGRAPT
Trigger: AGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC...ACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CAA 90 bp GGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCACTGGTTCCAGCATGTaGTTCCAGAGTGCGATGGCC +
Preference number: 3 (lower is better)
Translates to: GEGHLSLARLWVKLLEVVTGSSM*FQSAMA
Trigger: GGCCATCGCACTCTGGAACAACATGCTGGAACCAGT...GACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR GCA 72 bp AAGGTGCTGTCCTGGCTCCGCCACTCATTAGCACGCTaGCCCCTTGTGGCCAGCTTCGTTCTAGTTGTTTTC +
Preference number: 3 (lower is better)
Translates to: KVLSWLRHSLAR*PLVASFVLVVF
Trigger: GAAAACAACTAGAACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp AAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATaGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAA +
Preference number: 3 (lower is better)
Translates to: KVAAPTPGLHKR*KVSASRRQTQE
Trigger: TTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 72 bp AGAGTCACCCAGGGCGGCCACCACTTTGATGTCTGCTaGTCGGAGCTGGTGGACAGAGGTTGGAACACTATT +
Preference number: 3 (lower is better)
Translates to: RVTQGGHHFDVC*SELVDRGWNTI
Trigger: AATAGTGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCTGGGTGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR CCA 72 bp CCCCTCCAATGCTCCAAGAGAGTCCCCTCCAAGATGTaGGTAGGTCACTGGAGTTGTTTGGTCGAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: PLQCSKRVPSKM*VGHWSCLVELP
Trigger: TGGGAGCTCGACCAAACAACTCCAGTGACCTACCCACATCTTGGAGGGGACTCTCTTGGAGCATTGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR CCA 72 bp CTGGAAACCCATCCTCTCTGGGACTCTGCTCAGGTCTaGCCAGAGAACCTTCACAGTCTTGATCACCCCCTC +
Preference number: 3 (lower is better)
Translates to: LETHPLWDSAQV*PENLHSLDHPL
Trigger: GAGGGGGTGATCAAGACTGTGAAGGTTCTCTGGCCAGACCTGAGCAGAGTCCCAGAGAGGATGGGTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp GTACCTGACCAAGGACTTGTGGAAACGCAGGGACCTTaGCGCAGGAAGGCACTGACCTCTGTTCTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: VPDQGLVETQGP*RRKALTSVLER
Trigger: CCTCTCAAGAACAGAGGTCAGTGCCTTCCTGCGCCAAGGTCCCTGCGTTTCCACAAGTCCTTGGTCAGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CAA 90 bp CTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTGAGGTTGGAACACTATaGGAAGCCTTCCACTCTGTA +
Preference number: 3 (lower is better)
Translates to: LVPACCSRVRWPSRHARGEVGTL*EAFHSV
Trigger: TACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCTC...ACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CAA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCCAACCTAGGTCCTCGTaGTGGGTGGTACAGGCCGAG +
Preference number: 3 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLQPRSS*WVVQAE
Trigger: CTCGGCCTGTACCACCCACAACGAGGACCTAGGTTG...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CAA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTTACTCGCCACTTACTTaGAAGCCTACAGGAATGAGA +
Preference number: 3 (lower is better)
Translates to: PQAAPPGARRVSITCNVVYSPLT*KPTGMR
Trigger: TCTCATTCCTGTAGGCTTCAAAGTAAGTGGCGAGTA...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp AATAGTGGGTTTGGTGACTTGAGGATATGCTCGTGGTaGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTG +
Preference number: 3 (lower is better)
Translates to: NSGFGDLRICSW*QAVWALVGRGL
Trigger: CAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTCACCAAACCCACTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 72 bp CTGGTCGGAGCTGGTGGACAGAGGTTGGAACACTATTaGAAGCCTTCCACTCTGTACACAGGAAGTCACTGC +
Preference number: 3 (lower is better)
Translates to: LVGAGGQRLEHY*KPSTLYTGSHC
Trigger: GCAGTGACTTCCTGTGTACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAGCTCCGACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR CCA 72 bp GCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGCTaGCCAAAGCTGGAACCGTTCACTACAGAATCTCAC +
Preference number: 3 (lower is better)
Translates to: ALKTLGPSTLLS*PKLEPFTTESH
Trigger: GTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGCTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CAA 90 bp ACGCTGTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTGCTGGTGGACAGAGGTaGGAACACTATTGGAAGCCT +
Preference number: 3 (lower is better)
Translates to: TLCVLVPVGETGDAMLEVAGGQR*EHYWKP
Trigger: AGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAGC...AACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACACAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR-3UTR CAA 90 bp TATCTACACGCAACCGCTCGCCTGACACACCCTGAGCTTCTCCACTTCCGTGTTGATTGTGATTGTGTCTaGGTTATGGCCTCTCGAAGT +
Preference number: 3 (lower is better)
Translates to: YLHATARLTHPELLHFRVDCDCV*VMASRS
Trigger: ACTTCGAGAGGCCATAACCAAGACACAATCACAATC...AACACGGAAGTGGAGAAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp GACTGCTGGTTCATATCTGAATCCCAGGAGCCCAGCTaGTCGATCTGTTTTAAAGTAGGGCACATCACCTCA +
Preference number: 3 (lower is better)
Translates to: DCWFISESQEPS*SICFKVGHITS
Trigger: TGAGGTGATGTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAACCAGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp CATCGCTGCAGAAAGAAACTTTTAGTAGAGGACTGCTaGTTCATATCTGAATCCCAGGAGCCCAGCTGGTCG +
Preference number: 3 (lower is better)
Translates to: HRCRKKLLVEDC*FISESQEPSWS
Trigger: CGACCAGCTGGGCTCCTGGGATTCAGATATGAACCAGCAGTCCTCTACTAAAAGTTTCTTTCTGCAGCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR TCA 72 bp TCTTGTAGCCTCATTAGGAGCAGAATGGTGAGTCAGTaGGGCTCTGATTTGTTCCATGGCAGCCTGTTAGGA +
Preference number: 3 (lower is better)
Translates to: SCSLIRSRMVSQ*GSDLFHGSLLG
Trigger: TCCTAACAGGCTGCCATGGAACAAATCAGAGCCTCACTGACTCACCATTCTGCTCCTAATGAGGCTACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp CAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATaGCAACCAGCCAGCTCCAAAATTCCAGCCACCACC +
Preference number: 3 (lower is better)
Translates to: QLLNRYVLDWTE*QPASSKIPATT
Trigger: GGTGGTGGCTGGAATTTTGGAGCTGGCTGGTTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 72 bp GATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTaGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: DALVVTHHHVAS*LLKEFDLSARL
Trigger: CAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CCA 72 bp CACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTaGTTCGTCTGCTTGATTTTTGTTTCCCATGCTATC +
Preference number: 3 (lower is better)
Translates to: HQVHVAYLSPAM*FVCLIFVSHAI
Trigger: GATAGCATGGGAAACAAAAATCAAGCAGACGAACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGAGTGGGTTTGGTGACTaGAGGATATGCTCGTGGTGG +
Preference number: 3 (lower is better)
Translates to: THLPTDALVVTHHHVASWSGFGD*RICSWW
Trigger: CCACCACGAGCATATCCTCAAGTCACCAAACCCACT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR-3UTR CAA 90 bp CAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGTCCATGGAACACACTTaGAGACACAGTAGTCTATGT +
Preference number: 3 (lower is better)
Translates to: QWKKRQCSQDLGAQHIVKSMEHT*RHSSLC
Trigger: ACATAGACTACTGTGTCTCAAAGTGTGTTCCATGGA...CTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 72 bp ATTGTGATTGTGTCTTGGTTATGGCCTCTCGAAGTGTaGGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGT +
Preference number: 3 (lower is better)
Translates to: IVIVSWLWPLEV*DGFQRFSVQMC
Trigger: ACACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACAATCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 72 bp AGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTaGCAGAACCTCATGCTCTTTCCTGATTGTAATAAG +
Preference number: 3 (lower is better)
Translates to: RSLPSLAETKCS*QNLMLFPDCNK
Trigger: CTTATTACAATCAGGAAAGAGCATGAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp GATTGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATaGGTTTCAGAGGTTTTCTGTGCAGATGTGTACATA +
Preference number: 3 (lower is better)
Translates to: DCVLVMASRSVR*VSEVFCADVYI
Trigger: TATGTACACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp TTCAAGACATGGCTGATTGTGATTGTGTCTTGGTTATaGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTT +
Preference number: 3 (lower is better)
Translates to: FKTWLIVIVSWL*PLEVCDGFQRF
Trigger: AAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACAATCACAATCAGCCATGTCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR TCA 72 bp TCGCGTATCTATCACCTGCAATGTGGTTCGTCTGCTTaGTTTTTGTTTCCCATGCTATCGTATGAGGTCATT +
Preference number: 3 (lower is better)
Translates to: SRIYHLQCGSSA*FLFPMLSYEVI
Trigger: AATGACCTCATACGATAGCATGGGAAACAAAAATCAAGCAGACGAACCACATTGCAGGTGATAGATACGCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR GCA 72 bp TGCAATGTGGTTCGTCTGCTTGATTTTTGTTTCCCATaGTATCGTATGAGGTCATTGCCTTCTTTAGCTGAG +
Preference number: 3 (lower is better)
Translates to: CNVVRLLDFCFP*YRMRSLPSLAE
Trigger: CTCAGCTAAAGAAGGCAATGACCTCATACGATAGCATGGGAAACAAAAATCAAGCAGACGAACCACATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CCA 72 bp TCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTTaGATTGGACTGAATGGCAACCAGCCAGCTCCAAAA +
Preference number: 3 (lower is better)
Translates to: SWIQNSCLIGMC*IGLNGNQPAPK
Trigger: TTTTGGAGCTGGCTGGTTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR GCA 72 bp TGGAACAATTTGCGGCGTTTAGTACATTCACGGTGTTaGGCAAGCATCACTTCTATTTTCAAAGATTTTCCC +
Preference number: 3 (lower is better)
Translates to: WNNLRRLVHSRC*ASITSIFKDFP
Trigger: GGGAAAATCTTTGAAAATAGAAGTGATGCTTGCGCAACACCGTGAATGTACTAAACGCCGCAAATTGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327757.10
3UTR-3UTR CAA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATTTTGGGGGCAGCTATTaGAAACATTTAGGACAAATG +
Preference number: 3 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHFGGSY*KHLGQM
Trigger: CATTTGTCCTAAATGTTTCAAATAGCTGCCCCCAAA...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR TCA 72 bp GGCCTTATGAGAGCCTTTAATATGCTAATACACACATaGATTCCCCAAAGGAAGGTTATGGTAATGTTTCCC +
Preference number: 3 (lower is better)
Translates to: GLMRAFNMLIHT*IPQRKVMVMFP
Trigger: GGGAAACATTACCATAACCTTCCTTTGGGGAATTCATGTGTGTATTAGCATATTAAAGGCTCTCATAAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGTCCGGTAGGCTCGGCTaGAGGCCTCCAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALSGRLG*RPPAWL
Trigger: TAGCCAGGCTGGAGGCCTTCAGCCGAGCCTACCGGA...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CCCACCCCCGGGCCTAGAGGGCCACAGTGCGCAGGCTCATTGGAGGATCTTCCCGGGCGGCCACCACTTTaGTGTCTGCTGGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PTPGPRGPQCAGSLEDLPGRPPL*CLLVGA
Trigger: AGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCC...GGGAAGATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGGCCCGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGAGAGGGGCACTTaGGTTTGGCTCGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRQERGT*VWLGCG
Trigger: CCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTG...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGGCTCCAGGAGGAAAATaGCTGGCCGCAGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRAPGGK*LAAAPC
Trigger: GCATGGGGCTGCGGCCAGGCATTTTCCTCCTGGAGC...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: APRGLLQPGLGAIGCSAGKADSR*HWDSPV
Trigger: TACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTT...CCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
3UTR CAA 72 bp GGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTaGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GYARGGRQFGLW*VVAWAALLEAG
Trigger: GCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCCCATTGCCTGCCGTaGGAGAGTCACCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPHCLP*ESHPGL
Trigger: GAGCCCTGGGTGACTCTCTCACGGCAGGCAATGGGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGTGTCATAGCGGCCTaGCCCCACCAGCTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGRVIAA*PHQLAH
Trigger: ATGCGCGAGCTGGTGGGGTCAGGCCGCTATGACACG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCCGGCCCCATTGCCTaGCGTGAGAGAGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPGPIA*RERVTQ
Trigger: CTGGGTGACTCTCTCACGGCAGGCAATGGGGCCGGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGGCTGGCCTGCTGCACTaGGCACTTGTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALAGLLH*ALVWVS
Trigger: GGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGC...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGTCCCAGGCCTGGGCTaGCATGTCCCTAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRVPGLG*HVPSSG
Trigger: GCCAGAGCTAGGGACATGCCAGCCCAGGCCTGGGAC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGGGCTCTGGTTGGTCGTaGCTTGGGCAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWGSGWS*LGQPCW
Trigger: CCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAGGCTCTGGTTGGTCGTaGCTTGGGCAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAGSGWS*LGQPCW
Trigger: CCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CAA 72 bp TGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CDCPLGFLWHQA*KHVLVAGSGWG
Trigger: GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGGGGCTCCAATTACGTTaGTGTCAGCCGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRGLQLR*CQPASA
Trigger: GGCTGAAGCCGGCTGACATCAACGTAATTGGAGCCC...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCCCCCATTGCCTGCCGTaGGAGAGTCACCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAPHCLP*ESHPGL
Trigger: GAGCCCTGGGTGACTCTCTCACGGCAGGCAATGGGG...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGCCCCATTGCCTGCCGTaGGAGAGTCACCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWPHCLP*ESHPGL
Trigger: GAGCCCTGGGTGACTCTCTCACGGCAGGCAATGGGG...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCCGGTAGGCTCGGCTaGAGGCCTCCAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSGRLG*RPPAWL
Trigger: TAGCCAGGCTGGAGGCCTTCAGCCGAGCCTACCGGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGTGTCATAGCGGCCTaGCCCCACCAGCTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRVIAA*PHQLAH
Trigger: ATGCGCGAGCTGGTGGGGTCAGGCCGCTATGACACG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCCGTGTCATAGCGGCCTaGCCCCACCAGCTCGCGCAT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVARVIAA*PHQLAH
Trigger: ATGCGCGAGCTGGTGGGGTCAGGCCGCTATGACACG...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGGCGGCCACCACTTTaGTGTCTGCTGGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGRPPL*CLLVGA
Trigger: AGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGGGCGGCCACCACTTTaGTGTCTGCTGGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGGRPPL*CLLVGA
Trigger: AGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp TGTCCCGATGATGCCCACCACAAGGCCGACTCCCGCTGCCACTGGGACAGCCCAGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: CPDDAHHKADSRCHWDSPGMPAV*EVKTVL
Trigger: GAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCC...TGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTTGTGGTGGGCATCATCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCAGGAGAGGGGCACTTaGGTTTGGCTCGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRQERGT*VWLGCG
Trigger: CCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGIGSLG*GPTPGP
Trigger: AGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTAT...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGIGSLG*GPTPGP
Trigger: AGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTAT...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp CCACCCCCGGGCCTAGAGGGCCACAGTGCGCAGGCTCATTGGAGGATCTTCCCTTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PPPGLEGHSAQAHWRIFPYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...AGGGAAGATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGGCCCGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCACTGGCCGCAGCCCCATaGCAGAATGCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVALAAAP*QNAPGD
Trigger: GTCACCTGGAGCATTCTGGCATGGGGCTGCGGCCAG...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGCTGGCCGCAGCCCCATaGCAGAATGCTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGLAAAP*QNAPGD
Trigger: GTCACCTGGAGCATTCTGGCATGGGGCTGCGGCCAG...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRKADSR*HWDSPV
Trigger: TACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTCCGGCCACCTCTCCTaGACCTCCAGACCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSGHLS*TSRPLS
Trigger: GGACAGTGGTCTGGAGGTGCAGGAGAGGTGGCCGGA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTCCGGCCACCTCTCCTaGACCTCCAGACCACTGTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSGHLS*TSRPLS
Trigger: GGACAGTGGTCTGGAGGTGCAGGAGAGGTGGCCGGA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGTCCGGCCACCTCTCCTaGACCTCCAGACCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGSGHLS*TSRPLS
Trigger: GGACAGTGGTCTGGAGGTGCAGGAGAGGTGGCCGGA...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGACGTTCCCAGGTGTaGACCCGGCCCCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRRRSQV*TRPHCL
Trigger: CAGGCAATGGGGCCGGGTCCACACCTGGGAACGTCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGAGACGTTCCCAGGTGTaGACCCGGCCCCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGRRSQV*TRPHCL
Trigger: CAGGCAATGGGGCCGGGTCCACACCTGGGAACGTCT...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACCTCTCCTGCACCTCCAGACCACTGTCCCGATGATGCCCACCACAAGGCCGGCTGGCCTGCTGCACTaGGCACTTGTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PPLLHLQTTVPMMPTTRPAGLLH*ALVWVS
Trigger: GGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGC...CGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCTGGAGGTGCAGGAGAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp GTGCGATGGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAAAACAGTCCTCGGGTCCCAGGCCTGGGCTaGCATGTCCCTAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VRWPSRHARGLRSENSPRVPGLG*HVPSSG
Trigger: GCCAGAGCTAGGGACATGCCAGCCCAGGCCTGGGAC...CCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCATTCCCGCCTTGGCCCTaGTACAGGCTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAFPPWP*YRLASS
Trigger: GGAGCTGGCTAGCCTGTACCAGGGCCAAGGCGGGAA...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTTCCCGCCTTGGCCCTaGTACAGGCTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRFPPWP*YRLASS
Trigger: GGAGCTGGCTAGCCTGTACCAGGGCCAAGGCGGGAA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGTGGTTGGTCGTGGCTTaGGCAGCCCTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGWLVVA*AALLEA
Trigger: TGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCA...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGAGGCAGTTTGGGCTCTaGTTGGTCGTGGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRRQFGL*LVVAWA
Trigger: TGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCT...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGCCAGAATGCTCCAGGTaGCTCGGGCCTCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGPECSR*LGPLEE
Trigger: CTCTTCCAGAGGCCCGAGTCACCTGGAGCATTCTGG...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGGAGAGGTATGGATCTaGGGGGTCCCTTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKGEVWI*GVPCPR
Trigger: TCTGGGGCAAGGGACCCCTCAGATCCATACCTCTCC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCGGAGAGGTATGGATCTaGGGGGTCCCTTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGGEVWI*GVPCPR
Trigger: TCTGGGGCAAGGGACCCCTCAGATCCATACCTCTCC...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGCTCTGGTGCAGGGCTaGGCCAAGTGCCGTGATACT +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGALVQG*AKCRDT
Trigger: AGTATCACGGCACTTGGCTCAGCCCTGCACCAGAGC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCGGGTGGTCTCCTCTaGGCAATTACAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGPGGLL*AITGLW
Trigger: CCAGAGCCCTGTAATTGCTCAGAGGAGACCACCCGG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGGCTGGAAAACCACGGTaGAGGACTCCTGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALAGKPR*RTPAHC
Trigger: ACAGTGAGCAGGAGTCCTTCACCGTGGTTTTCCAGC...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCCCCCATTGCCTGCCGTaGGAGAGTCACCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGPHCLP*ESHPGL
Trigger: GAGCCCTGGGTGACTCTCTCACGGCAGGCAATGGGG...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCCTTCAGGGAAGGGTTaGATTCCCGGAGGATGTTCG +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRPSGKG*IPGGCS
Trigger: CGAACATCCTCCGGGAATTCAACCCTTCCCTGAAGG...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGAGGGACACAGAGACCTaGGGATCATCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALRDTET*GSSLGS
Trigger: ACTGCCCAAGGATGATCCTCAGGTCTCTGTGTCCCT...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCTGGCTGCTCGGGAGTaGGACTTGCTGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGLAARE*DLLLKW
Trigger: CCACTTCAGCAGCAAGTCTCACTCCCGAGCAGCCAG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTGGCTGCTCGGGAGTaGGACTTGCTGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLAARE*DLLLKW
Trigger: CCACTTCAGCAGCAAGTCTCACTCCCGAGCAGCCAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGGGCAGCCAGGTCCCATaGCCCTGCATGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWGSQVP*PCMLFL
Trigger: CAAGAACAGCATGCAGGGTCATGGGACCTGGCTGCC...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGCAGCCAGGTCCCATaGCCCTGCATGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGSQVP*PCMLFL
Trigger: CAAGAACAGCATGCAGGGTCATGGGACCTGGCTGCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCCGATACTGTGTGGTaGCATCGGGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPDTVW*HRGGRL
Trigger: CAGACGACCTCCCCGATGTCACCACACAGTATCGGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAACCCGATACTGTGTGGTaGCATCGGGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKPDTVW*HRGGRL
Trigger: CAGACGACCTCCCCGATGTCACCACACAGTATCGGG...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGTCTGAGTGGGACAGGTaGTGGGCATCTCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALSEWDR*WASLLS
Trigger: TGAGAGCAGAGATGCCCATCACCTGTCCCACTCAGA...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TGTCCCGATGATGCCCACCACAAGGCCGACTCCCGCTGCCACTGGGACAGCCCATCTGAGTGGGACAGGTaGTGGGCATCTCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CPDDAHHKADSRCHWDSPSEWDR*WASLLS
Trigger: TGAGAGCAGAGATGCCCATCACCTGTCCCACTCAGA...TGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTTGTGGTGGGCATCATCGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATGGGCGGCCACCACTTTaGTGTCTGCTGGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHGRPPL*CLLVGA
Trigger: AGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCC...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCCAGGAGAGGGGCACTTaGGTTTGGCTCGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAQERGT*VWLGCG
Trigger: CCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTG...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp CTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTCAGGAGAGGGGCACTTaGGTTTGGCTCGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LVPACCSRVRWPSRHARGQERGT*VWLGCG
Trigger: CCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTG...ACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCAGACCACTGTCCCGATaGTGCCCACCACAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGRPLSR*CPPQGR
Trigger: TCGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCT...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPIGSLG*GPTPGP
Trigger: AGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTAT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQEIGSLG*GPTPGP
Trigger: AGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTAT...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGGCCCCAAGAAGTTGTaGCTGTCCCCTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKGPKKL*LSPGLP
Trigger: AGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCGGCCCCAAGAAGTTGTaGCTGTCCCCTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGGPKKL*LSPGLP
Trigger: AGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCC...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGGGCCCCAAGAAGTTGTaGCTGTCCCCTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWGPKKL*LSPGLP
Trigger: AGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCC...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGGTGGGTTTGGTGACTTaGGGATATGCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALVGLVT*GYARGG
Trigger: GCCACCACGAGCATATCCTCAAGTCACCAAACCCAC...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCTGCTCACTGTACCTaGTGGAGGCCAGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPAHCT*WRPGGC
Trigger: ACAGCCTCCTGGCCTCCAGCAGGTACAGTGAGCAGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCTGCTCACTGTACCTaGTGGAGGCCAGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGPAHCT*WRPGGC
Trigger: ACAGCCTCCTGGCCTCCAGCAGGTACAGTGAGCAGG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCCCCGGCCCCATTGCCTaGCGTGAGAGAGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGPGPIA*RERVTQ
Trigger: CTGGGTGACTCTCTCACGGCAGGCAATGGGGCCGGG...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAKADSR*HWDSPV
Trigger: TACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTT...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPKADSR*HWDSPV
Trigger: TACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LVPACCSRVRWPSRHARGKADSR*HWDSPV
Trigger: TACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTT...ACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTCCGGCCACCTCTCCTaGACCTCCAGACCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHSGHLS*TSRPLS
Trigger: GGACAGTGGTCTGGAGGTGCAGGAGAGGTGGCCGGA...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGGTGACTCGGGCCTCTaGAAGAGCTGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGGDSGL*KSCSSR
Trigger: TCTGCTGGAGCAGCTCTTCCAGAGGCCCGAGTCACC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR CCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCAGGAGGAAAATGCCTaGCCGCAGCCCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWQEENA*PQPHAR
Trigger: TCTGGCATGGGGCTGCGGCCAGGCATTTTCCTCCTG...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGACTGCATCACCACCTTaGCCAGCCGGGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRTASPP*PAGWSP
Trigger: AGGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGACTGCATCACCACCTTaGCCAGCCGGGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGTASPP*PAGWSP
Trigger: AGGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCTCACTGTACCTGCTaGAGGCCAGGAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAHCTC*RPGGCS
Trigger: GGAACAGCCTCCTGGCCTCCAGCAGGTACAGTGAGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGCGTGGTAGAATCCTaGAGTCGGGGGTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSVVES*SRGSSE
Trigger: CTCGGAGGACCCCCGACTCCAGGATTCTACCACGCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGGTCCACCAGCCTCCTaGCCTGGACAGGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGGPPAS*PGQVDP
Trigger: AGGATCTACCTGTCCAGGCCAGGAGGCTGGTGGACC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTGGTCCACCAGCCTCCTaGCCTGGACAGGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVGPPAS*PGQVDP
Trigger: AGGATCTACCTGTCCAGGCCAGGAGGCTGGTGGACC...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGCTCTGTCCCTGCATaGCAGCCAGGTCCCATGACC +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAGSVPA*QPGPMT
Trigger: GGTCATGGGACCTGGCTGCCATGCAGGGACAGAGCC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGCTCTGTCCCTGCATaGCAGCCAGGTCCCATGACC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGSVPA*QPGPMT
Trigger: GGTCATGGGACCTGGCTGCCATGCAGGGACAGAGCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCTGGCCTGCTGCACTaGGCACTTGTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAGLLH*ALVWVS
Trigger: GGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGCCTGGCTAGCTCTTaGGAGTTCTCCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSLASS*EFSRRV
Trigger: GACCCTGCGGGAGAACTCCCAAGAGCTAGCCAGGCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGTCCCAGGCCTGGGCTaGCATGTCCCTAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDVPGLG*HVPSSG
Trigger: GCCAGAGCTAGGGACATGCCAGCCCAGGCCTGGGAC...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTCCCGCCTTGGCCCTaGTACAGGCTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPFPPWP*YRLASS
Trigger: GGAGCTGGCTAGCCTGTACCAGGGCCAAGGCGGGAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGGCACATTTCCCGCCTTaGCCCTGGTACAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWAHFPP*PWYRLA
Trigger: GGCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGC...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCACATTTCCCGCCTTaGCCCTGGTACAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAHFPP*PWYRLA
Trigger: GGCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGCACATTTCCCGCCTTaGCCCTGGTACAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGAHFPP*PWYRLA
Trigger: GGCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGTGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWCSRVR*PSRHAR
Trigger: GCGGGCATGCCGAGATGGCCATCGCACTCTGGAACA...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRFFSLV*EQSAVP
Trigger: CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCGGGGCTTCTTCAGCCTaGTCTGGGAGCAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGGASSA*SGSNRL
Trigger: CAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCC...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGCGCAGGCTCATTaGAGGATCTTCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKSAQAH*RIFPPA
Trigger: GGCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACT...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGTGCGCAGGCTCATTaGAGGATCTTCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSAQAH*RIFPPA
Trigger: GGCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCAGTGCGCAGGCTCATTaGAGGATCTTCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGSAQAH*RIFPPA
Trigger: GGCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACT...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGAGTGCGCAGGCTCATTaGAGGATCTTCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGSAQAH*RIFPPA
Trigger: GGCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACT...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCGCAGGCCACAAAAAGTaGCAGCTCCCACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGAGHKK*QLPHLG
Trigger: GCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGC...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCGCAGGCCACAAAAAGTaGCAGCTCCCACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGAGHKK*QLPHLG
Trigger: GCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGC...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGTGGTTGGTCGTGGCTTaGGCAGCCCTGCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQEWLVVA*AALLEA
Trigger: TGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCA...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGTTTGGGCTCTGGTTaGTCGTGGCTTGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSLGSG*SWLGQP
Trigger: GGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAAGTTTGGGCTCTGGTTaGTCGTGGCTTGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVASLGSG*SWLGQP
Trigger: GGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACT...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCCTTCTCAGGTCCCCATaGGGTTGGTCGGGGGCCTAC +
Preference number: 4 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSLLRSP*GWSGAY
Trigger: GTAGGCCCCCGACCAACCCCATGGGGACCTGAGAAG...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGAGAGGTATGGATCTaGGGGGTCCCTTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGEVWI*GVPCPR
Trigger: TCTGGGGCAAGGGACCCCTCAGATCCATACCTCTCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATGCTCTGGTGCAGGGCTaGGCCAAGTGCCGTGATACT +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHALVQG*AKCRDT
Trigger: AGTATCACGGCACTTGGCTCAGCCCTGCACCAGAGC...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCTCTGGTGCAGGGCTaGGCCAAGTGCCGTGATACT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPALVQG*AKCRDT
Trigger: AGTATCACGGCACTTGGCTCAGCCCTGCACCAGAGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCGGGTGGTCTCCTCTaGGCAATTACAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPGGLL*AITGLW
Trigger: CCAGAGCCCTGTAATTGCTCAGAGGAGACCACCCGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGGCCGGCTTCAGCCTATaGACTGAGGTGGGAACCGTA +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGAGFSL*TEVGTV
Trigger: TACGGTTCCCACCTCAGTTCATAGGCTGAAGCCGGC...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCCGGCTTCAGCCTATaGACTGAGGTGGGAACCGTA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAGFSL*TEVGTV
Trigger: TACGGTTCCCACCTCAGTTCATAGGCTGAAGCCGGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCGCCGGCTTCAGCCTATaGACTGAGGTGGGAACCGTA +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGAGFSL*TEVGTV
Trigger: TACGGTTCCCACCTCAGTTCATAGGCTGAAGCCGGC...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGGCTCCAATTACGTTaGTGTCAGCCGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGLQLR*CQPASA
Trigger: GGCTGAAGCCGGCTGACATCAACGTAATTGGAGCCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGACAGGCCTCGGTACTaGGTCAAGACGTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRDRPRY*VKTSKT
Trigger: CGTCTTGGACGTCTTGACTCAGTACCGAGGCCTGTC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAGACAGGCCTCGGTACTaGGTCAAGACGTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVADRPRY*VKTSKT
Trigger: CGTCTTGGACGTCTTGACTCAGTACCGAGGCCTGTC...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGCAGCCAGGTCCCATaGCCCTGCATGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAGSQVP*PCMLFL
Trigger: CAAGAACAGCATGCAGGGTCATGGGACCTGGCTGCC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCCCCGATACTGTGTGGTaGCATCGGGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAPDTVW*HRGGRL
Trigger: CAGACGACCTCCCCGATGTCACCACACAGTATCGGG...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGAAGTCCACGAGGTTaGCCAGGACTCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAGSPRG*PGLWAP
Trigger: AGGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGAAGTCCACGAGGTTaGCCAGGACTCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGSPRG*PGLWAP
Trigger: AGGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGGCGGCCACCACTTTaGTGTCTGCTGGTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDGRPPL*CLLVGA
Trigger: AGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCC...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGMPAV*EVKTVL
Trigger: GAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp CGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGCAGGAGAGGGGCACTTaGGTTTGGCTCGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RLWVKLLEVVLRPTGSSMQERGT*VWLGCG
Trigger: CCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTG...CATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGACCACTGTCCCGATaGTGCCCACCACAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRPLSR*CPPQGR
Trigger: TCGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGCCCCAAGAAGTTGTaGCTGTCCCCTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGPKKL*LSPGLP
Trigger: AGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGTCATCACTCCCATaGACACCTGCTGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALLSSLP*TPAVAF
Trigger: AAAGGCCACAGCAGGTGTGCATGGGAGTGATGACAG...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCAGAGAGCACTGGCTaGTCGGGAGTGAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPESTG*SGVRLA
Trigger: AGCAAGTCTCACTCCCGAGCAGCCAGTGCTCTCTGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAACCAGAGAGCACTGGCTaGTCGGGAGTGAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKPESTG*SGVRLA
Trigger: AGCAAGTCTCACTCCCGAGCAGCCAGTGCTCTCTGG...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAAGGGGCTCTGTCCCTaGATGGCAGCCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPKGLCP*MAARSH
Trigger: ATGGGACCTGGCTGCCATGCAGGGACAGAGCCCCTT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTGCACTGAGGTAGGGTaGAAGGCAGAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRCTEVG*KAEGAL
Trigger: CAGAGCCCCTTCTGCCTTGCACCCTACCTCAGTGCA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGCACTGAGGTAGGGTaGAAGGCAGAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGCTEVG*KAEGAL
Trigger: CAGAGCCCCTTCTGCCTTGCACCCTACCTCAGTGCA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAAAACGCTGGCCTGCTaGACTGGGCACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGKTLAC*TGHLSG
Trigger: CCCAGACAAGTGCCCAGTGCAGCAGGCCAGCGTTTT...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGTGATGGGCATCTCTaGTCTCAGGTCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGDGHL*SQVQGL
Trigger: GAGACCCTGGACCTGAGAGCAGAGATGCCCATCACC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCGGTGATGGGCATCTCTaGTCTCAGGTCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGGDGHL*SQVQGL
Trigger: GAGACCCTGGACCTGAGAGCAGAGATGCCCATCACC...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CCACTGGGACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGACACCACTTTGATGTCTaGTGGTCGGAGCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PLGQPSRAPRGLLQPGLGHHFDV*WSELVD
Trigger: GTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTG...TCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTCCCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTCCCATCCCCTCCAATaGTCCAAGAGAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSHPLQ*SKRVPS
Trigger: GGAGGGGACTCTCTTGGAGCATTGGAGGGGATGGGA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTCCCATCCCCTCCAATaGTCCAAGAGAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSHPLQ*SKRVPS
Trigger: GGAGGGGACTCTCTTGGAGCATTGGAGGGGATGGGA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGGCAGTTGTTCTGAGCTaGCAGCATGGCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRAVVLS*QHGTFP
Trigger: GGGAAATGTGCCATGCTGGCAGCTCAGAACAACTGC...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATAAGGCCGACTCCCGCTaGCACTGGGACAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDKADSR*HWDSPV
Trigger: TACTGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTT...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGCCTAGAGGGCCACAGTaGGCAGGCTCATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DSPVEHLGGFFSLVWEQSPRGPQ*AGSLED
Trigger: ATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGG...CGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTCAGCCGAGCCTCTTCTaGAGGTCCTGTTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVQPSLF*RSCSQP
Trigger: TGGCTGTGAACAGGACCTGCAGAAGAGGCTCGGCTG...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATCAGGAGGAAAATGCCTaGCCGCAGCCCCATGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHQEENA*PQPHAR
Trigger: TCTGGCATGGGGCTGCGGCCAGGCATTTTCCTCCTG...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCACAGATCGCCCGTCCCTaGGTCTGGAGGAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAQIARP*VWRNFQ
Trigger: CTGGAAATTCCTCCAGACCCAGGGACGGGCGATCTG...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCATGCACACCTGCTGTaGCCTTTCAGTCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRHAHLL*PFSPVL
Trigger: CAAGACTGGACTGAAAGGCCACAGCAGGTGTGCATG...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCTTGGCCAGCCGGGTaGTCTCCTCTGAGCAATTAC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPWPAG*SPLSNY
Trigger: GTAATTGCTCAGAGGAGACCACCCGGCTGGCCAAGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATACTGCATCACCACCTTaGCCAGCCGGGTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHTASPP*PAGWSP
Trigger: AGGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGT...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGCTCACTGTACCTGCTaGAGGCCAGGAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAAHCTC*RPGGCS
Trigger: GGAACAGCCTCCTGGCCTCCAGCAGGTACAGTGAGC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGCGTGGTAGAATCCTaGAGTCGGGGGTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSVVES*SRGSSE
Trigger: CTCGGAGGACCCCCGACTCCAGGATTCTACCACGCT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGTCCACCAGCCTCCTaGCCTGGACAGGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGPPAS*PGQVDP
Trigger: AGGATCTACCTGTCCAGGCCAGGAGGCTGGTGGACC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGGGAGGTCGTCTGGTTTaGAGCCAATTCCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALGGRLV*SQFHCQ
Trigger: CTGGCAATGGAATTGGCTCCAAACCAGACGACCTCC...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGGAGCTGGATGTTCTaGAAGAAGGGCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGSWMF*KKGCST
Trigger: GGTGCTGCAGCCCTTCTTCCAGAACATCCAGCTCCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACCTCTCCTGCACCTCCAGACCACTGTCCCGATGATGCCCACCACAAGGCCGTCTGCTGGTCGGAGCTaGTGGACAGAGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: PPLLHLQTTVPMMPTTRPSAGRS*WTEVGT
Trigger: TGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGA...CGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCTGGAGGTGCAGGAGAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGGTCCCAGGCCTGGGCTaGCATGTCCCTAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKVPGLG*HVPSSG
Trigger: GCCAGAGCTAGGGACATGCCAGCCCAGGCCTGGGAC...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACGTCCCAGGCCTGGGCTaGCATGTCCCTAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LEFGSAVGEVVGGSLAAHVPGLG*HVPSSG
Trigger: GCCAGAGCTAGGGACATGCCAGCCCAGGCCTGGGAC...GTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATTTCCCGCCTTGGCCCTaGTACAGGCTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDFPPWP*YRLASS
Trigger: GGAGCTGGCTAGCCTGTACCAGGGCCAAGGCGGGAA...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTCTGAGCTGCCAGCATaGCACATTTCCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSELPA*HISRLG
Trigger: GCCAAGGCGGGAAATGTGCCATGCTGGCAGCTCAGA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPCSRVR*PSRHAR
Trigger: GCGGGCATGCCGAGATGGCCATCGCACTCTGGAACA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATGGGGCTTCTTCAGCCTaGTCTGGGAGCAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHGASSA*SGSNRL
Trigger: CAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCC...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGGGCTTCTTCAGCCTaGTCTGGGAGCAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGASSA*SGSNRL
Trigger: CAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGTTGTGACTGTCCCCTaGGCTTCCTATGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKVVTVP*ASYGTR
Trigger: CCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAAC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGTTGTGACTGTCCCCTaGGCTTCCTATGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRVVTVP*ASYGTR
Trigger: CCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAAC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGTTGTGACTGTCCCCTaGGCTTCCTATGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGVVTVP*ASYGTR
Trigger: CCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAAC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGGCAGCTCCCACACCTaGGCTGCACAAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKGSSHT*AAQEME
Trigger: TTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCAGGCAGTTTGGGCTCTaGTTGGTCGTGGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGRQFGL*LVVAWA
Trigger: TGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCT...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAACACCATCGTGGGGTATaGCTCTCTTTCCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKHHRGV*LSFQCG
Trigger: GCCACACTGGAAAGAGAGTCATACCCCACGATGGTG...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCTGGAAAACCACGGTaGAGGACTCCTGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAGKPR*RTPAHC
Trigger: ACAGTGAGCAGGAGTCCTTCACCGTGGTTTTCCAGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGTGCTGTTTCTGTAGCTaGACAGATAGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALCCFCS*TDRGSP
Trigger: AGGAGAGCCCCTATCTGTTCAGCTACAGAAACAGCA...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGGCCGGCTTCAGCCTATaGACTGAGGTGGGAACCGTA +
Preference number: 4 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWAGFSL*TEVGTV
Trigger: TACGGTTCCCACCTCAGTTCATAGGCTGAAGCCGGC...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGGCTCCAATTACGTTaGTGTCAGCCGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGLQLR*CQPASA
Trigger: GGCTGAAGCCGGCTGACATCAACGTAATTGGAGCCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCTTCAGGGAAGGGTTaGATTCCCGGAGGATGTTCG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPSGKG*IPGGCS
Trigger: CGAACATCCTCCGGGAATTCAACCCTTCCCTGAAGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTCCTTCAGGGAAGGGTTaGATTCCCGGAGGATGTTCG +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVPSGKG*IPGGCS
Trigger: CGAACATCCTCCGGGAATTCAACCCTTCCCTGAAGG...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGACAGCTCCCTCAGGTTaGCGATCTCAAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGTAPSG*RSQAPS
Trigger: TGACGGTGCTTGAGATCGTCAACCTGAGGGAGCTGT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGGGACACAGAGACCTaGGGATCATCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKRDTET*GSSLGS
Trigger: ACTGCCCAAGGATGATCCTCAGGTCTCTGTGTCCCT...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCCTCCTGCACTGTATaGCAGTCCCCGATACTGTGT +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGPSCTV*QSPILC
Trigger: ACACAGTATCGGGGACTGTCATACAGTGCAGGAGGG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCGCGGTCTGAGAAGTaGAAACAGTCCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPRSEK*KQSSEK
Trigger: CTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCCGCGGTCTGAGAAGTaGAAACAGTCCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGPRSEK*KQSSEK
Trigger: CTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp CTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LVPACCSRVRWPSRHARGGMPAV*EVKTVL
Trigger: GAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCC...ACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp TTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTAGACCACTGTCCCGATaGTGCCCACCACAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: FSLVWEQSAVPQGVEVRARPLSR*CPPQGR
Trigger: TCGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCT...AGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGTGGGTTTGGTGACTTaGGGATATGCTCGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGVGLVT*GYARGG
Trigger: GCCACCACGAGCATATCCTCAAGTCACCAAACCCAC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTCGCAAGCCCATTCTGTaGGAGGAGAACCGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSRKPIL*EENRAK
Trigger: CTTAGCACGGTTCTCCTCTCACAGAATGGGCTTGCG...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422425.6
CDS-3UTR GCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGGCTCCAGGAGGAAAATaGCTGGCCGCAGCCCCATGC +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKAPGGK*LAAAPC
Trigger: GCATGGGGCTGCGGCCAGGCATTTTCCTCCTGGAGC...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGACTCCCATGCACACCTaGTGTGGCCTTTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRTPMHT*CGLSVQ
Trigger: CTGGACTGAAAGGCCACAGCAGGTGTGCATGGGAGT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCATTACAGGGCTCTGGTaGAGGGCTGAGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPITGLW*RAEPSA
Trigger: GGCACTTGGCTCAGCCCTGCACCAGAGCCCTGTAAT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTACGGTGAAGGACTCCTaGTCACTGTACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSTVKDS*SLYLLE
Trigger: CTCCAGCAGGTACAGTGAGCAGGAGTCCTTCACCGT...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGACGGTGAAGGACTCCTaGTCACTGTACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRTVKDS*SLYLLE
Trigger: CTCCAGCAGGTACAGTGAGCAGGAGTCCTTCACCGT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGACGGTGAAGGACTCCTaGTCACTGTACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWTVKDS*SLYLLE
Trigger: CTCCAGCAGGTACAGTGAGCAGGAGTCCTTCACCGT...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTCCAGAGAGCACTGGCTaGTCGGGAGTGAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVPESTG*SGVRLA
Trigger: AGCAAGTCTCACTCCCGAGCAGCCAGTGCTCTCTGG...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAAGGGGCTCTGTCCCTaGATGGCAGCCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQAKGLCP*MAARSH
Trigger: ATGGGACCTGGCTGCCATGCAGGGACAGAGCCCCTT...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCTGGGCACCTCTCTATaGAGGACGTCCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGLGTSL*RTSKAL
Trigger: CAATGCCTTGGACGTCCTGCATAGAGAGGTGCCCAG...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAAAACGCTGGCCTGCTaGACTGGGCACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPKTLAC*TGHLSG
Trigger: CCCAGACAAGTGCCCAGTGCAGCAGGCCAGCGTTTT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGTGATGGGCATCTCTaGTCTCAGGTCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAGDGHL*SQVQGL
Trigger: GAGACCCTGGACCTGAGAGCAGAGATGCCCATCACC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCACCACTTTGATGTCTaGTGGTCGGAGCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWHHFDV*WSELVD
Trigger: GTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTG...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTCACCACTTTGATGTCTaGTGGTCGGAGCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCHHFDV*WSELVD
Trigger: GTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTG...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTGGTCGAGCTCCCACTaGTGTAGTCAGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRWSSSH*CSQRVT
Trigger: GGTGACTCTCTGACTACAGCAGTGGGAGCTCGACCA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCTAGAGGGCCACAGTaGGCAGGCTCATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPRGPQ*AGSLED
Trigger: ATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCAGATCGCCCGTCCCTaGGTCTGGAGGAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPQIARP*VWRNFQ
Trigger: CTGGAAATTCCTCCAGACCCAGGGACGGGCGATCTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCAATTACAGGGCTCTaGTGCAGGGCTGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAITGL*CRAEPS
Trigger: ACTTGGCTCAGCCCTGCACCAGAGCCCTGTAATTGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATCCTTGGCCAGCCGGGTaGTCTCCTCTGAGCAATTAC +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHPWPAG*SPLSNY
Trigger: GTAATTGCTCAGAGGAGACCACCCGGCTGGCCAAGG...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGCTCACTGTACCTGCTaGAGGCCAGGAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDAHCTC*RPGGCS
Trigger: GGAACAGCCTCCTGGCCTCCAGCAGGTACAGTGAGC...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCACCAGCCTCCTGGCCTaGACAGGTAGATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPTSLLA*TGRSSA
Trigger: AGCTGAGGATCTACCTGTCCAGGCCAGGAGGCTGGT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCACCAGCCTCCTGGCCTaGACAGGTAGATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVATSLLA*TGRSSA
Trigger: AGCTGAGGATCTACCTGTCCAGGCCAGGAGGCTGGT...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGGTCCACCAGCCTCCTaGCCTGGACAGGTAGATCCT +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGGPPAS*PGQVDP
Trigger: AGGATCTACCTGTCCAGGCCAGGAGGCTGGTGGACC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCGTCCTCAGAAACGGCTaGACCTGGTTCGGACATGTG +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGVLRNG*TWFGHV
Trigger: CACATGTCCGAACCAGGTCCAGCCGTTTCTGAGGAC...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGATCGGGGAGGTCGTCTaGTTTGGAGCCAATTCCATT +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRIGEVV*FGANSI
Trigger: AATGGAATTGGCTCCAAACCAGACGACCTCCCCGAT...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGATGCATTCGTGTCATTaGCATCACCCGTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRMHSCH*HHPCPR
Trigger: CCGTGGGCACGGGTGATGCCAATGACACGAATGCAT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTATGCATTCGTGTCATTaGCATCACCCGTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSMHSCH*HHPCPR
Trigger: CCGTGGGCACGGGTGATGCCAATGACACGAATGCAT...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAAAGAAGGACGTATCTaGGAGCCCATCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRKEGRI*EPIRQD
Trigger: GTCCTGGCGGATGGGCTCCCAGATACGTCCTTCTTT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAAAGAAGGACGTATCTaGGAGCCCATCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGKEGRI*EPIRQD
Trigger: GTCCTGGCGGATGGGCTCCCAGATACGTCCTTCTTT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTATTCCGTGGCCAAGTaGGCCTCCGGATTCTCACAG +
Preference number: 4 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCYSVAK*ASGFSQ
Trigger: CTGTGAGAATCCGGAGGCCCACTTGGCCACGGAATA...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCTATTCCGTGGCCAAGTaGGCCTCCGGATTCTCACAG +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGYSVAK*ASGFSQ
Trigger: CTGTGAGAATCCGGAGGCCCACTTGGCCACGGAATA...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCGCTGAACATATTCCGTaGCCAAGTGGGCCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGAEHIP*PSGPPD
Trigger: ATCCGGAGGCCCACTTGGCCACGGAATATGTTCAGC...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCTGAACATATTCCGTaGCCAAGTGGGCCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAEHIP*PSGPPD
Trigger: ATCCGGAGGCCCACTTGGCCACGGAATATGTTCAGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGCTGAACATATTCCGTaGCCAAGTGGGCCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSAEHIP*PSGPPD
Trigger: ATCCGGAGGCCCACTTGGCCACGGAATATGTTCAGC...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATTGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDCSRVR*PSRHAR
Trigger: GCGGGCATGCCGAGATGGCCATCGCACTCTGGAACA...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: VEHLGGFFSLVWEQSAVPFFSLV*EQSAVP
Trigger: CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA...CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWFFSLV*EQSAVP
Trigger: CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGTTGTGACTGTCCCCTaGGCTTCCTATGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAVVTVP*ASYGTR
Trigger: CCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAAC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGGCTGCACAAGAGATaGAAGGTGAGTGCTTCACGC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGLHKR*KVSASR
Trigger: GCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTAGGATATGCTCGTGGTaGCAGGCAGTTTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSRICSW*QAVWAL
Trigger: CAGAGCCCAAACTGCCTGCCACCACGAGCATATCCT...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGCAGCAGAGGTTGAGGTaGGGCCCAGCCAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALQQRLR*GPASQD
Trigger: GTCCTGGCTGGCTGGGCCCCACCTCAACCTCTGCTG...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp GCTGTAGTCAGAGAGTCACCCAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGCTGGTGGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AVVRESPRAATT*MSAGRSWWTEV
Trigger: AACCTCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCTGGGTGACTCTCTGACTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
3UTR CAA 72 bp GAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTaGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: EGHLSLARLWVK*LEVVLRPTGSS
Trigger: GCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCACCATCGTGGGGTATaGCTCTCTTTCCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPHHRGV*LSFQCG
Trigger: GCCACACTGGAAAGAGAGTCATACCCCACGATGGTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCACAGCTCCCTCAGGTTaGCGATCTCAAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPTAPSG*RSQAPS
Trigger: TGACGGTGCTTGAGATCGTCAACCTGAGGGAGCTGT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGGGACACAGAGACCTaGGGATCATCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRDTET*GSSLGS
Trigger: ACTGCCCAAGGATGATCCTCAGGTCTCTGTGTCCCT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCCTCCTGCACTGTATaGCAGTCCCCGATACTGTGT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPSCTV*QSPILC
Trigger: ACACAGTATCGGGGACTGTCATACAGTGCAGGAGGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATCCCTCCTGCACTGTATaGCAGTCCCCGATACTGTGT +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHPSCTV*QSPILC
Trigger: ACACAGTATCGGGGACTGTCATACAGTGCAGGAGGG...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCTCCGGGAACAGCTTaGTTGAGGAATGCATTCGTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAPGTA*LRNAFV
Trigger: CACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGGGAAGTCCACGAGGTTaGCCAGGACTCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKGSPRG*PGLWAP
Trigger: AGGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCC...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR TCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTCCGGTAGGCTCGGCTaGAGGCCTCCAGCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVSGRLG*RPPAWL
Trigger: TAGCCAGGCTGGAGGCCTTCAGCCGAGCCTACCGGA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCTGAGTGGGACAGGTaGTGGGCATCTCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSEWDR*WASLLS
Trigger: TGAGAGCAGAGATGCCCATCACCTGTCCCACTCAGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCTCTGAGTGGGACAGGTaGTGGGCATCTCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSSEWDR*WASLLS
Trigger: TGAGAGCAGAGATGCCCATCACCTGTCCCACTCAGA...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGGCCTGTTGGATGTGCTaGACATATTCCGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGACWMC*TYSVAK
Trigger: CTTGGCCACGGAATATGTTCAGCACATCCAACAGGC...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCCTGTTGGATGTGCTaGACATATTCCGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DSPVEHLGGFFSLVWEQSACWMC*TYSVAK
Trigger: CTTGGCCACGGAATATGTTCAGCACATCCAACAGGC...CGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCAAGTGCAGTTGTTCTaGGCTGCCAGCATGGCACAT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRQVQLF*AASMAH
Trigger: ATGTGCCATGCTGGCAGCTCAGAACAACTGCACTTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTCAAGTGCAGTTGTTCTaGGCTGCCAGCATGGCACAT +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSQVQLF*AASMAH
Trigger: ATGTGCCATGCTGGCAGCTCAGAACAACTGCACTTG...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTCAAGTGCAGTTGTTCTaGGCTGCCAGCATGGCACAT +
Preference number: 4 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCQVQLF*AASMAH
Trigger: ATGTGCCATGCTGGCAGCTCAGAACAACTGCACTTG...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCGCGGTCTGAGAAGTaGAAACAGTCCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPRSEK*KQSSEK
Trigger: CTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp GTGCGATGGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAAAACAGTCCTCGGCCGCGGTCTGAGAAGTaGAAACAGTCCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VRWPSRHARGLRSENSPRPRSEK*KQSSEK
Trigger: CTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGG...CCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVGEVVGGSLAAHWFQHVIGSLG*GPTPGP
Trigger: AGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTAT...AACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGAGAACCGTGCTAAGTaGGGGTGCCTGTTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPENRAK*GCLLSR
Trigger: TCTGCTCAACAGGCACCCTCACTTAGCACGGTTCTC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGCAAGCCCATTCTGTaGGAGGAGAACCGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRKPIL*EENRAK
Trigger: CTTAGCACGGTTCTCCTCTCACAGAATGGGCTTGCG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTCTGCTGGTTCATATCTaGATCCCAGGAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVLLVHI*IPGAQL
Trigger: CAGCTGGGCTCCTGGGATTCAGATATGAACCAGCAG...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTTTCAGTCCAGTCTTaGTTCTCCAGATCGCCCGTC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLSVQS*FSRSPV
Trigger: GACGGGCGATCTGGAGAAGCAAGACTGGACTGAAAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCACCAGGTTTACAAATaGTCTGGGGACCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRHQVYK*SGDLLL
Trigger: CAGCAGGAGGTCCCCAGAGCATTTGTAAACCTGGTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATATTACAGGGCTCTGGTaGAGGGCTGAGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDITGLW*RAEPSA
Trigger: GGCACTTGGCTCAGCCCTGCACCAGAGCCCTGTAAT...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAATTACAGGGCTCTGGTaGAGGGCTGAGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQAITGLW*RAEPSA
Trigger: GGCACTTGGCTCAGCCCTGCACCAGAGCCCTGTAAT...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCCTGGGCACCTCTCTATaGAGGACGTCCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVALGTSL*RTSKAL
Trigger: CAATGCCTTGGACGTCCTGCATAGAGAGGTGCCCAG...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCTGGGCACCTCTCTATaGAGGACGTCCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLGTSL*RTSKAL
Trigger: CAATGCCTTGGACGTCCTGCATAGAGAGGTGCCCAG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGTTTCCCAGGAACACCTaGCGCATGATAGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWFPRNT*RMIVGF
Trigger: GAACCCCACTATCATGCGGCAGGTGTTCCTGGGAAA...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGTTCTGGAAGAAGGGCTaGAGCACCACAGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWFWKKG*STTEKS
Trigger: GGACTTCTCTGTGGTGCTGCAGCCCTTCTTCCAGAA...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTTCTGGAAGAAGGGCTaGAGCACCACAGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRFWKKG*STTEKS
Trigger: GGACTTCTCTGTGGTGCTGCAGCCCTTCTTCCAGAA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCATTCTGGAAGAAGGGCTaGAGCACCACAGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAFWKKG*STTEKS
Trigger: GGACTTCTCTGTGGTGCTGCAGCCCTTCTTCCAGAA...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGGTGATGGGCATCTCTaGTCTCAGGTCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGGDGHL*SQVQGL
Trigger: GAGACCCTGGACCTGAGAGCAGAGATGCCCATCACC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCACCACTTTGATGTCTaGTGGTCGGAGCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPHHFDV*WSELVD
Trigger: GTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTCTTGGTCGAGCTCCCACTaGTGTAGTCAGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: GSSMLFQSAMAISACPRSWSSSH*CSQRVT
Trigger: GGTGACTCTCTGACTACAGCAGTGGGAGCTCGACCA...AGACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCTGGTCGAGCTCCCACTaGTGTAGTCAGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAWSSSH*CSQRVT
Trigger: GGTGACTCTCTGACTACAGCAGTGGGAGCTCGACCA...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCATGTTGTTCCAGAGTaGGATGGCCATCTCGGCATG +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGHVVPE*DGHLGM
Trigger: CATGCCGAGATGGCCATCGCACTCTGGAACAACATG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCATGTTGTTCCAGAGTaGGATGGCCATCTCGGCATG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRHVVPE*DGHLGM
Trigger: CATGCCGAGATGGCCATCGCACTCTGGAACAACATG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCATGTTGTTCCAGAGTaGGATGGCCATCTCGGCATG +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGHVVPE*DGHLGM
Trigger: CATGCCGAGATGGCCATCGCACTCTGGAACAACATG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGGAGATGGAAGGTGAGTaGTTCACGCAGGCAAACCCA +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWEMEGE*FTQANP
Trigger: TGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTC...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCATGCACACCTGCTGTaGCCTTTCAGTCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRHAHLL*PFSPVL
Trigger: CAAGACTGGACTGAAAGGCCACAGCAGGTGTGCATG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAGGTTTACAAATGCTCTaGGGACCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAGLQML*GPPAAG
Trigger: ACCTGCAGCAGGAGGTCCCCAGAGCATTTGTAAACC...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGTTTACAAATGCTCTaGGGACCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGLQML*GPPAAG
Trigger: ACCTGCAGCAGGAGGTCCCCAGAGCATTTGTAAACC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCAATTACAGGGCTCTaGTGCAGGGCTGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPAITGL*CRAEPS
Trigger: ACTTGGCTCAGCCCTGCACCAGAGCCCTGTAATTGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGAGAGGGACACTTCATTaGCCTCCCGTGTTTTACACT +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRRGTLH*PPVFYT
Trigger: AGTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCT...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATGCCTATGAACTGAGGTaGGAACCGTATCGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHAYELR*EPYRRG
Trigger: ACCCCTCCGATACGGTTCCCACCTCAGTTCATAGGC...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCCTATGAACTGAGGTaGGAACCGTATCGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPAYELR*EPYRRG
Trigger: ACCCCTCCGATACGGTTCCCACCTCAGTTCATAGGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGTTCCAGAGAGCACTaGCTGCTCGGGAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPCSREH*LLGSET
Trigger: AGTCTCACTCCCGAGCAGCCAGTGCTCTCTGGAACA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGTCCTCAGAAACGGCTaGACCTGGTTCGGACATGTG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPVLRNG*TWFGHV
Trigger: CACATGTCCGAACCAGGTCCAGCCGTTTCTGAGGAC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGAGGTCGTCTGGTTTaGAGCCAATTCCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGGRLV*SQFHCQ
Trigger: CTGGCAATGGAATTGGCTCCAAACCAGACGACCTCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTGGAGGTCGTCTGGTTTaGAGCCAATTCCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVGGRLV*SQFHCQ
Trigger: CTGGCAATGGAATTGGCTCCAAACCAGACGACCTCC...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCATGCATTCGTGTCATTaGCATCACCCGTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPMHSCH*HHPCPR
Trigger: CCGTGGGCACGGGTGATGCCAATGACACGAATGCAT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTTACACAAAACGCTaGCCTGCTGCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGSYTKR*PAALGT
Trigger: AGTGCCCAGTGCAGCAGGCCAGCGTTTTGTGTAACT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTGGGTGGATGCAGTCTaGGGCAAAGAAGGACGTATC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRWVDAV*GKEGRI
Trigger: GATACGTCCTTCTTTGCCCCAGACTGCATCCACCCA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCTGCTGGTCGGAGCTaGTGGACAGAGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSAGRS*WTEVGT
Trigger: TGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCACTTTGATGTCTGCTaGTCGGAGCTGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGHFDVC*SELVDR
Trigger: TCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGTCACTGGAGTTGTTTaGTCGAGCTCCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGVTGVV*SSSHCC
Trigger: ACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGAC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGTCCCCTCCAAGATGTaGGTAGGTCACTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRVPSKM*VGHWSC
Trigger: ACAACTCCAGTGACCTACCCACATCTTGGAGGGGAC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGGTCCCCTCCAAGATGTaGGTAGGTCACTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWVPSKM*VGHWSC
Trigger: ACAACTCCAGTGACCTACCCACATCTTGGAGGGGAC...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTATTCCGTGGCCAAGTaGGCCTCCGGATTCTCACAG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPYSVAK*ASGFSQ
Trigger: CTGTGAGAATCCGGAGGCCCACTTGGCCACGGAATA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCTGAACATATTCCGTaGCCAAGTGGGCCTCCGGAT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPAEHIP*PSGPPD
Trigger: ATCCGGAGGCCCACTTGGCCACGGAATATGTTCAGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGTTGACGAAAGCCCTTaGGAGCTCCTCAGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSVDESP*ELLRED
Trigger: ATCCTCTCTGAGGAGCTCCCAAGGGCTTTCGTCAAC...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTTCTGAGCTGCCAGCATaGCACATTTCCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FSLVWEQSAVPQGVEVRASELPA*HISRLG
Trigger: GCCAAGGCGGGAAATGTGCCATGCTGGCAGCTCAGA...AGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCCAGTAGGAGAAACTaGAGATGCCATGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRASRRN*RCHAGG
Trigger: ACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTCTTGCGGCCCACTaGTTCCAGCATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKSLAAH*FQHVVP
Trigger: TGGAACAACATGCTGGAACCAGTGGGCCGCAAGACT...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPFFSLV*EQSAVP
Trigger: CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGGGGCTTCTTCAGCCTaGTCTGGGAGCAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: GALEFGSAVGEVVGGSLAGASSA*SGSNRL
Trigger: CAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCC...CGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGAGTGCGCAGGCTCATTaGAGGATCTTCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKSAQAH*RIFPPA
Trigger: GGCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACT...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCCTTGGGCAGCCCTGCTaGAGGCAGGCCACAAAAAGT +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGLGQPC*RQATKS
Trigger: ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAG...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGTTGAGGATATGCTCGTaGTGGCAGGCAGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGLRICS*WQAVWA
Trigger: AGCCCAAACTGCCTGCCACCACGAGCATATCCTCAA...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCTGAACATATTCCGTaGCCAAGTGGGCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPAEHIP*PSGPPS
Trigger: GGAAGGAGGCCCACTTGGCCACGGAATATGTTCAGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGGAAACCCATCCTCTCTaGGACTCTGCTCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWETHPL*DSAQVW
Trigger: CCAGACCTGAGCAGAGTCCCAGAGAGGATGGGTTTC...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCCAGAATGCTCCAGGTaGCTCGGGCCTCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSPECSR*LGPLEE
Trigger: CTCTTCCAGAGGCCCGAGTCACCTGGAGCATTCTGG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTGCTGTTTCTGTAGCTaGACAGATAGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRCCFCS*TDRGSP
Trigger: AGGAGAGCCCCTATCTGTTCAGCTACAGAAACAGCA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCTTTGTCAGGACATCTaGTTTCCGCTCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRLCQDI*FPLLLL
Trigger: TAAGAGAAGGAGCGGAAATCAGATGTCCTGACAAAG...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCACCTTCAGGGAAGGGTTaGATTCCCGGAGGATGTTCG +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQAPSGKG*IPGGCS
Trigger: CGAACATCCTCCGGGAATTCAACCCTTCCCTGAAGG...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TATCTACACGCAACCGCTCGCCTGACACACCCTGAGCTTCTCCACTTCCGTGTTCCCGATACTGTGTGGTaGCATCGGGGAGGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: YLHATARLTHPELLHFRVPDTVW*HRGGRL
Trigger: CAGACGACCTCCCCGATGTCACCACACAGTATCGGG...AACACGGAAGTGGAGAAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCATTGCGGAGATGGTaGACAAAGTTGGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRALRRW*TKLAAE
Trigger: TTCTGCAGCCAACTTTGTTCACCATCTCCGCAATGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGTCTCAATGGCTGGCTTaGTGGGGTACGTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWSQWLA*WGTCSY
Trigger: GTAACTACACGTACCCCATCAAGCCAGCCATTGAGA...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCCTGTTGGATGTGCTaGACATATTCCGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPACWMC*TYSVAK
Trigger: CTTGGCCACGGAATATGTTCAGCACATCCAACAGGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCCAAGTGCAGTTGTTCTaGGCTGCCAGCATGGCACAT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAQVQLF*AASMAH
Trigger: ATGTGCCATGCTGGCAGCTCAGAACAACTGCACTTG...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGGCCCCAAGAAGTTGTaGCTGTCCCCTGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSGPKKL*LSPGLP
Trigger: AGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGTCCCAAAATGACATGTaGAGGTTGCTCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGSQNDM*RLLSPK
Trigger: CTTGGGGGAGAGCAACCTTCACATGTCATTTTGGGA...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCTAGCAGGGGCTCAGTaGATGCAGCCCATATTTTCA +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGLAGAQ*MQPIFS
Trigger: TGAAAATATGGGCTGCATTCACTGAGCCCCTGCTAG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR TCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGAGAACCGTGCTAAGTaGGGGTGCCTGTTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGENRAK*GCLLSR
Trigger: TCTGCTCAACAGGCACCCTCACTTAGCACGGTTCTC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422425.6
CDS-3UTR TCA 90 bp GTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGGTGGTACAGGCCGAGTaGTGGCGCCTCCCTCTCGCC +
Preference number: 4 (lower is better)
Translates to: VMASRSVRWVSEVFCADVVVQAE*WRLPLA
Trigger: GGCGAGAGGGAGGCGCCATCACTCGGCCTGTACCAC...CACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTGAGTCAGTGAGGCTCTaGTTTGTTCCATGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVESVRL*FVPWQP
Trigger: AGGCTGCCATGGAACAAATCAGAGCCTCACTGACTC...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATCTTTCAGTCCAGTCTTaGTTCTCCAGATCGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHLSVQS*FSRSPV
Trigger: GACGGGCGATCTGGAGAAGCAAGACTGGACTGAAAG...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCACTCCCATGCACACCTaGTGTGGCCTTTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGTPMHT*CGLSVQ
Trigger: CTGGACTGAAAGGCCACAGCAGGTGTGCATGGGAGT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCTGTCATCACTCCCATaGACACCTGCTGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLSSLP*TPAVAF
Trigger: AAAGGCCACAGCAGGTGTGCATGGGAGTGATGACAG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCATCCTATTCCAGAGATaGCAGGCCAGCGTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGILFQR*QASVVE
Trigger: TTCTACCACGCTGGCCTGGCATCTCTGGAATAGGAT...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGATCCTATTCCAGAGATaGCAGGCCAGCGTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRILFQR*QASVVE
Trigger: TTCTACCACGCTGGCCTGGCATCTCTGGAATAGGAT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTCCCATGACCCTGCATaGTGTTCTTGTAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSHDPA*CSCRSS
Trigger: TGAGGACCTACAAGAACAGCATGCAGGGTCATGGGA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTCCCATGACCCTGCATaGTGTTCTTGTAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSHDPA*CSCRSS
Trigger: TGAGGACCTACAAGAACAGCATGCAGGGTCATGGGA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTTCCCATGACCCTGCATaGTGTTCTTGTAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSSHDPA*CSCRSS
Trigger: TGAGGACCTACAAGAACAGCATGCAGGGTCATGGGA...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCACAACTTGGATGTCTaGAGGTCTCAGGGCATGCAC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPHNLDV*RSQGMH
Trigger: GTGCATGCCCTGAGACCTGCAGACATCCAAGTTGTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGACGTCCAAGGCATTaGGGAGATGGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGRPRH*GDGEQS
Trigger: ACTTTGTTCACCATCTCCGCAATGCCTTGGACGTCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTTCCCAGGAACACCTaGCGCATGATAGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPFPRNT*RMIVGF
Trigger: GAACCCCACTATCATGCGGCAGGTGTTCCTGGGAAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCGGTGATGGGCATCTCTaGTCTCAGGTCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GEGHLSLARLWVKLLEVVGDGHL*SQVQGL
Trigger: GAGACCCTGGACCTGAGAGCAGAGATGCCCATCACC...GACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGTACACAGGAAGTCACTaGCCCAGTTCTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWYTGSH*PSSQWL
Trigger: CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTA...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTACACAGGAAGTCACTaGCCCAGTTCTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRYTGSH*PSSQWL
Trigger: CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCTACACAGGAAGTCACTaGCCCAGTTCTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGYTGSH*PSSQWL
Trigger: CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTA...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTACACAGGAAGTCACTaGCCCAGTTCTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGYTGSH*PSSQWL
Trigger: CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTCCCATCCCCTCCAATaGTCCAAGAGAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKSHPLQ*SKRVPS
Trigger: GGAGGGGACTCTCTTGGAGCATTGGAGGGGATGGGA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCAGTTGTTCTGAGCTaGCAGCATGGCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPAVVLS*QHGTFP
Trigger: GGGAAATGTGCCATGCTGGCAGCTCAGAACAACTGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCATGCCCGCGGTCTGCAGTTGTTCTGAGCTaGCAGCATGGCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: GSSMLFQSAMAISACPRSAVVLS*QHGTFP
Trigger: GGGAAATGTGCCATGCTGGCAGCTCAGAACAACTGC...AGACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GGTAGGTCACTGGAGTTGTTTGGTCGAGCTCCCACTGCTGTAGTCAGAGAGTCATCCGGCCACCTCTCCTaGACCTCCAGACCACTGTCC +
Preference number: 4 (lower is better)
Translates to: GRSLELFGRAPTAVVRESSGHLS*TSRPLS
Trigger: GGACAGTGGTCTGGAGGTGCAGGAGAGGTGGCCGGA...TGACTCTCTGACTACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR GCA 90 bp CACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCCCTAGAGGGCCACAGTaGGCAGGCTCATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HLSLARLWVKLLEVVLRPPRGPQ*AGSLED
Trigger: ATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGG...GGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp CTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGTTCAAGCTGGCCTGCTaGACTGGGCACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLQPGLGAIGCSAGCRGKFKLAC*TGHLSG
Trigger: CCCAGACAAGTGCCCAGTGCAGCAGGCCAGCTTGAA...CTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGGGTTTCTGCAGTCTaGTCAGGTAGTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGVSAV*SGSCCF
Trigger: GAAACAGCAACTACCTGACCAGACTGCAGAAACCCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGACCTCAAGCTTGTCTTaGGGTTTCTGCAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGTSSLS*GFCSLV
Trigger: GACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGT...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCAGACGTTCCCAGGTGTaGACCCGGCCCCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVRRSQV*TRPHCL
Trigger: CAGGCAATGGGGCCGGGTCCACACCTGGGAACGTCT...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCTCCTGCCACAGCCTaGTTTAAGAAGGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPPATA*FKKALG
Trigger: TCCTAATGCCTTCTTAAACCAGGCTGTGGCAGGAGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGTCCTTCCGAGGTCTTTaGCATGTCCACGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRSFRGL*HVHVFK
Trigger: TTTGAAAACGTGGACATGCCAAAGACCTCGGAAGGA...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGACTTGCTGCTGAAGTaGAAACAGTCAGGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRDLLLK*KQSGAK
Trigger: CTTCGCTCCTGACTGTTTCCACTTCAGCAGCAAGTC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATTGTTCCAGAGAGCACTaGCTGCTCGGGAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDCSREH*LLGSET
Trigger: AGTCTCACTCCCGAGCAGCCAGTGCTCTCTGGAACA...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGGCTCTGTCCCTGCATaGCAGCCAGGTCCCATGACC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVGSVPA*QPGPMT
Trigger: GGTCATGGGACCTGGCTGCCATGCAGGGACAGAGCC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTATCGGGGAGGTCGTCTaGTTTGGAGCCAATTCCATT +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVIGEVV*FGANSI
Trigger: AATGGAATTGGCTCCAAACCAGACGACCTCCCCGAT...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTGGCCTGCTGCACTaGGCACTTGTCTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSAGLLH*ALVWVS
Trigger: GGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGTTACACAAAACGCTaGCCTGCTGCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSYTKR*PAALGT
Trigger: AGTGCCCAGTGCAGCAGGCCAGCGTTTTGTGTAACT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATAAAGAAGGACGTATCTaGGAGCCCATCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDKEGRI*EPIRQD
Trigger: GTCCTGGCGGATGGGCTCCCAGATACGTCCTTCTTT...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGGGTGGATGCAGTCTaGGGCAAAGAAGGACGTATC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPWVDAV*GKEGRI
Trigger: GATACGTCCTTCTTTGCCCCAGACTGCATCCACCCA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGTGGTTCAAGCATATTaGTCCAAAGGGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKVVQAY*SKGLWP
Trigger: TGGCCAGAGCCCTTTGGACCAATATGCTTGAACCAC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGGTGGTTCAAGCATATTaGTCCAAAGGGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VEHLGGFFSLVWEQSAVPVVQAY*SKGLWP
Trigger: TGGCCAGAGCCCTTTGGACCAATATGCTTGAACCAC...CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCAGTTCTCAATGGCTaGCTTGATGGGGTACGTGTA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPVLNG*LDGVRV
Trigger: TACACGTACCCCATCAAGCCAGCCATTGAGAACTGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCACTGGGACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGACTGGTGGACAGAGGTTaGAACACTATTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PLGQPSRAPRGLLQPGLGLVDRG*NTIGSL
Trigger: AAGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAG...TCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTCCCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCACTTTGATGTCTGCTaGTCGGAGCTGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPHFDVC*SELVDR
Trigger: TCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCCACTTTGATGTCTGCTaGTCGGAGCTGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSHFDVC*SELVDR
Trigger: TCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTG...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGTCACTGGAGTTGTTTaGTCGAGCTCCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPVTGVV*SSSHCC
Trigger: ACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGAC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGTCACTGGAGTTGTTTaGTCGAGCTCCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAVTGVV*SSSHCC
Trigger: ACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGAC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCATGTGGGTAGGTCACTaGAGTTGTTTGGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGMWVGH*SCLVEL
Trigger: GAGCTCGACCAAACAACTCCAGTGACCTACCCACAT...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCGAATGTTGGGCAGTGTaGTGTGAGTCTCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGECWAV*CESPSS
Trigger: GGAACTTGGAGACTCACACCACACTGCCCAACATTC...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGAATGTTGGGCAGTGTaGTGTGAGTCTCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRECWAV*CESPSS
Trigger: GGAACTTGGAGACTCACACCACACTGCCCAACATTC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGAATGTTGGGCAGTGTaGTGTGAGTCTCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGECWAV*CESPSS
Trigger: GGAACTTGGAGACTCACACCACACTGCCCAACATTC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGTTGACGAAAGCCCTTaGGAGCTCCTCAGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPVDESP*ELLRED
Trigger: ATCCTCTCTGAGGAGCTCCCAAGGGCTTTCGTCAAC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGTTGACGAAAGCCCTTaGGAGCTCCTCAGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAVDESP*ELLRED
Trigger: ATCCTCTCTGAGGAGCTCCCAAGGGCTTTCGTCAAC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TGGAAGCCTTCCACTCTGTACACAGGAAGTCACTGCCCCAGTTCTCAATGGCTGTTCCCGCCTTGGCCCTaGTACAGGCTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WKPSTLYTGSHCPSSQWLFPPWP*YRLASS
Trigger: GGAGCTGGCTAGCCTGTACCAGGGCCAAGGCGGGAA...CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTACAGAGTGGAAGGCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCTGGAGATGCCATGCTaGAGGTTCCAGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGLEMPC*RFQFTF
Trigger: GAAAGTGAACTGGAACCTCCAGCATGGCATCTCCAG...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGCCAGTAGGAGAAACTaGAGATGCCATGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAASRRN*RCHAGG
Trigger: ACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGGGGTGAGTGTGTTTTaGAAGAAAGGCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGGVSVF*KKGCTT
Trigger: TGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTGGGGTGAGTGTGTTTTaGAAGAAAGGCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCGVSVF*KKGCTT
Trigger: TGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCC...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCCTCTCTCGTTCAGTaGGGTGAGTGTGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPSLVQ*GECVLE
Trigger: TTCCAAAACACACTCACCCCACTGAACGAGAGAGGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTCCAATGCTCCAAGAGAGTCCCCTCCAAGATGTGGGTAGGTCACTGGAGTTGTGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: PPMLQESPLQDVGRSLELCSRVR*PSRHAR
Trigger: GCGGGCATGCCGAGATGGCCATCGCACTCTGGAACA...CAACTCCAGTGACCTACCCACATCTTGGAGGGGACTCTCTTGGAGCATTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGTCTTGCGGCCCACTaGTTCCAGCATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSLAAH*FQHVVP
Trigger: TGGAACAACATGCTGGAACCAGTGGGCCGCAAGACT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATAGTCTTGCGGCCCACTaGTTCCAGCATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHSLAAH*FQHVVP
Trigger: TGGAACAACATGCTGGAACCAGTGGGCCGCAAGACT...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: RLWVKLLEVVLRPTGSSMPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...CATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCCCAAGTGGTTCAAGCTaGCCTGCTGCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: GEGHLSLARLWVKLLEVVPSGSS*PAALGT
Trigger: AGTGCCCAGTGCAGCAGGCCAGCTTGAACCACTTGG...GACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp GTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGTGTTTTGCTTCCAAGTaGTTCAAGCTGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VEHLGGFFSLVWEQSAVPCFASK*FKLACC
Trigger: GCAGCAGGCCAGCTTGAACCACTTGGAAGCAAAACA...CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGGACTCTGCTCAGGTCTaGCCAGAGAACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWDSAQV*PENLHS
Trigger: ACTGTGAAGGTTCTCTGGCCAGACCTGAGCAGAGTC...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp TATCTACACGCAACCGCTCGCCTGACACACCCTGAGCTTCTCCACTTCCGTGTTGAAACGCAGGGACCTTaGCGCAGGAAGGCACTGACC +
Preference number: 4 (lower is better)
Translates to: YLHATARLTHPELLHFRVETQGP*RRKALT
Trigger: GGTCAGTGCCTTCCTGCGCCAAGGTCCCTGCGTTTC...AACACGGAAGTGGAGAAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp GGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTaGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: GHLSLARLWVKL*EVVLRPTGSSM
Trigger: CATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGTTCCAATGTTGTCTGTaGAGTTCTGGGGAGAATAGT +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALFQCCL*SSGENS
Trigger: ACTATTCTCCCCAGAACTTCACAGACAACATTGGAA...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGTGAGACTTGCTGCTaGAGTGGAAACAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSETCC*SGNSQE
Trigger: CTCCTGACTGTTTCCACTTCAGCAGCAAGTCTCACT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCGGGAACAGCTTGATTaGGGAATGCATTCGTGTCAT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRREQLD*GMHSCH
Trigger: ATGACACGAATGCATTCCTCAATCAAGCTGTTCCCG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGCATTGCGGAGATGGTaGACAAAGTTGGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAALRRW*TKLAAE
Trigger: TTCTGCAGCCAACTTTGTTCACCATCTCCGCAATGC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGAGTGGAATTTCTaGTTTGGGTGGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGWEWNF*FGWMQS
Trigger: AGACTGCATCCACCCAAATCAGAAATTCCACTCCCA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTGGGAGTGGAATTTCTaGTTTGGGTGGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRWEWNF*FGWMQS
Trigger: AGACTGCATCCACCCAAATCAGAAATTCCACTCCCA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTTGGGAGTGGAATTTCTaGTTTGGGTGGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSWEWNF*FGWMQS
Trigger: AGACTGCATCCACCCAAATCAGAAATTCCACTCCCA...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGTGGGAGTGGAATTTCTaGTTTGGGTGGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: DSPVEHLGGFFSLVWEQSWEWNF*FGWMQS
Trigger: AGACTGCATCCACCCAAATCAGAAATTCCACTCCCA...CGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCTCAATGGCTGGCTTaGTGGGGTACGTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSQWLA*WGTCSY
Trigger: GTAACTACACGTACCCCATCAAGCCAGCCATTGAGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGTCTTTCTCCAGGTTaGTGTCGGGGCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSLSPG*CRGCFS
Trigger: TGAAAAACAGCCCCGACATCAACCTGGAGAAAGACT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCAGTCTTTCTCCAGGTTaGTGTCGGGGCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSLSPG*CRGCFS
Trigger: TGAAAAACAGCCCCGACATCAACCTGGAGAAAGACT...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTCTCGTTCAGTGGGGTaGGTGTGTTTTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSRSVG*VCFGRK
Trigger: CTTTCTTCCAAAACACACTCACCCCACTGAACGAGA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp GACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGTCTCGTTCAGTGGGGTaGGTGTGTTTTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: DSPVEHLGGFFSLVWEQSSRSVG*VCFGRK
Trigger: CTTTCTTCCAAAACACACTCACCCCACTGAACGAGA...CGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp CTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTCCGCGGTCTGAGAAGTaGAAACAGTCCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LRRGALEFGSAVGEVVGGPRSEK*KQSSEK
Trigger: CTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGG...ACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSGMPAV*EVKTVL
Trigger: GAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCAGACCACTGTCCCGATaGTGCCCACCACAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVRPLSR*CPPQGR
Trigger: TCGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCT...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp TTCTTGCTTCTCCAGGGAGCTTTGCGAGTGTCTGAGGCAAGTGCAGTTGTTCTGATAGGGAGTTTAGGGTaGGGACCCACCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLLLQGALRVSEASAVVLIGSLG*GPTPGP
Trigger: AGGCCCGGGGGTGGGTCCTCACCCTAAACTCCCTAT...CAGAACAACTGCACTTGCCTCAGACACTCGCAAAGCTCCCTGGAGAAGCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGACAAGAGATGGAAGGTaGGTGCTTCACGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQETRDGR*VLHAGK
Trigger: TTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGT...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGTTATTGAAGGAGTTTaGCCTCTCTGCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGVIEGV*PLCQAA
Trigger: CGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAAC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGGGCGCAGGAAGGCACTaGCCTCTGTTCTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALGAGRH*PLFLRG
Trigger: ACCTCTCAAGAACAGAGGTCAGTGCCTTCCTGCGCC...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGACTCCCATGCACACCTaGTGTGGCCTTTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKTPMHT*CGLSVQ
Trigger: CTGGACTGAAAGGCCACAGCAGGTGTGCATGGGAGT...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCACTGTCATCACTCCCATaGACACCTGCTGTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQALSSLP*TPAVAF
Trigger: AAAGGCCACAGCAGGTGTGCATGGGAGTGATGACAG...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCCACCAGGTTCACAAATaGCCGAGGAACCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGHQVHK*PRNLSM
Trigger: CATGCTGAGGTTCCTCGGGCATTTGTGAACCTGGTG...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR GCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGACGTCCAAGGCATTaGGGAGATGGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAGRPRH*GDGEQS
Trigger: ACTTTGTTCACCATCTCCGCAATGCCTTGGACGTCC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGGGACGTCCAAGGCATTaGGGAGATGGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQEGRPRH*GDGEQS
Trigger: ACTTTGTTCACCATCTCCGCAATGCCTTGGACGTCC...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGTCTGATTTGGGTGGATaGAGTCTGGGGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQESDLGG*SLGQRR
Trigger: CCTTCTTTGCCCCAGACTGCATCCACCCAAATCAGA...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCTGATTTGGGTGGATaGAGTCTGGGGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSDLGG*SLGQRR
Trigger: CCTTCTTTGCCCCAGACTGCATCCACCCAAATCAGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCAGGGTCTCTGTTTTaGTTCCAAGTGGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPGSLF*FQVVQA
Trigger: TGCTTGAACCACTTGGAAGCAAAACAGAGACCCTGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp AGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCTCTACACAGGAAGTCACTaGCCCAGTTCTCAATGGCTG +
Preference number: 4 (lower is better)
Translates to: SLVWEQSAVPQGVEVRALYTGSH*PSSQWL
Trigger: CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTA...GAGAGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAAACTGGAGATGCCATaGTGGAGGTTCCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGKLEMP*WRFQFT
Trigger: AGTGAACTGGAACCTCCAGCATGGCATCTCCAGTTT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCAGGGGCTCAGTGAATaGAGCCCATATTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGQGLSE*SPYFQT
Trigger: AGTCTGAAAATATGGGCTGCATTCACTGAGCCCCTG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR GCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCTCCCTGGGCTTTTGTaGAGCATAAAAGAGACCATC +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGLPGLL*SIKETI
Trigger: GATGGTCTCTTTTATGCTGCACAAAAGCCCAGGGAG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCACCAGGTTCACAAATaGCCGAGGAACCAGATCATT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRHQVHK*PRNQII
Trigger: AATGATCTGGTTCCTCGGGCATTTGTGAACCTGGTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTGTGTACACGTATACATaGAAGCGGGGAGGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVVYTYT*KRGGED
Trigger: ATCTTCACCTCCCCGCTTGCATGTATACGTGTACAC...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCAGATCGCCCGTCCCTaGGTCTGGAGGAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSQIARP*VWRNFQ
Trigger: CTGGAAATTCCTCCAGACCCAGGGACGGGCGATCTG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGACTCTCTTTCCAGTGTaGCACACAGGCATTGGAACA +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGTLFPV*HTGIGT
Trigger: TGTTCCAATGCCTGTGTGCCACACTGGAAAGAGAGT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCACCTCAAGCTTGTCTTaGGGTTTCTGCAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPTSSLS*GFCSLV
Trigger: GACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTACCTCAAGCTTGTCTTaGGGTTTCTGCAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVTSSLS*GFCSLV
Trigger: GACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGT...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGAAACGGCTGGACCTaGTTCGGACATGTGATATTG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRRNGWT*FGHVIL
Trigger: CAATATCACATGTCCGAACCAGGTCCAGCCGTTTCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGGAGGTCGTCTGGTTTaGAGCCAATTCCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGGGRLV*SQFHCQ
Trigger: CTGGCAATGGAATTGGCTCCAAACCAGACGACCTCC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCATCGGGGAGGTCGTCTaGTTTGGAGCCAATTCCATT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPIGEVV*FGANSI
Trigger: AATGGAATTGGCTCCAAACCAGACGACCTCCCCGAT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGTGGTTCAAGCATATTaGTCCAAAGGGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPVVQAY*SKGLWP
Trigger: TGGCCAGAGCCCTTTGGACCAATATGCTTGAACCAC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGCCAGTTCTCAATGGCTaGCTTGATGGGGTACGTGTA +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQEPVLNG*LDGVRV
Trigger: TACACGTACCCCATCAAGCCAGCCATTGAGAACTGG...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCAGTTCTCAATGGCTaGCTTGATGGGGTACGTGTA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPVLNG*LDGVRV
Trigger: TACACGTACCCCATCAAGCCAGCCATTGAGAACTGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTGGTGGACAGAGGTTaGAACACTATTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLVDRG*NTIGSL
Trigger: AAGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTGTCACTGGAGTTGTTTaGTCGAGCTCCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: FSLVWEQSAVPQGVEVRAVTGVV*SSSHCC
Trigger: ACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGAC...AGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCATGTGGGTAGGTCACTaGAGTTGTTTGGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPMWVGH*SCLVEL
Trigger: GAGCTCGACCAAACAACTCCAGTGACCTACCCACAT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGTCCCCTCCAAGATGTaGGTAGGTCACTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGVPSKM*VGHWSC
Trigger: ACAACTCCAGTGACCTACCCACATCTTGGAGGGGAC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGCGATGGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAAAACAGTCCTCGGGAATGTTGGGCAGTGTaGTGTGAGTCTCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: VRWPSRHARGLRSENSPRECWAV*CESPSS
Trigger: GGAACTTGGAGACTCACACCACACTGCCCAACATTC...CCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GGTAGGTCACTGGAGTTGTTTGGTCGAGCTCCCACTGCTGTAGTCAGAGAGTCAGCACATTTCCCGCCTTaGCCCTGGTACAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: GRSLELFGRAPTAVVRESAHFPP*PWYRLA
Trigger: GGCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGC...TGACTCTCTGACTACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCTGGAGATGCCATGCTaGAGGTTCCAGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLEMPC*RFQFTF
Trigger: GAAAGTGAACTGGAACCTCCAGCATGGCATCTCCAG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGCCAGTAGGAGAAACTaGAGATGCCATGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGASRRN*RCHAGG
Trigger: ACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGGGTGAGTGTGTTTTaGAAGAAAGGCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGVSVF*KKGCTT
Trigger: TGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATGGGGTGAGTGTGTTTTaGAAGAAAGGCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHGVSVF*KKGCTT
Trigger: TGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCC...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCCTCTCTCGTTCAGTaGGGTGAGTGTGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPSLVQ*GECVLE
Trigger: TTCCAAAACACACTCACCCCACTGAACGAGAGAGGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GTGCGATGGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAAAACAGTCCTCGGCCCTCTCTCGTTCAGTaGGGTGAGTGTGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VRWPSRHARGLRSENSPRPSLVQ*GECVLE
Trigger: TTCCAAAACACACTCACCCCACTGAACGAGAGAGGG...CCGAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTAGTCTTGCGGCCCACTaGTTCCAGCATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FSLVWEQSAVPQGVEVRASLAAH*FQHVVP
Trigger: TGGAACAACATGCTGGAACCAGTGGGCCGCAAGACT...AGCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGTTTGGCTCGGCTGTaGGTGAAGTTGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSLARL*VKLLEV
Trigger: TACCTCCAACAACTTCACCCACAGCCGAGCCAAACT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGGGGCTTCTTCAGCCTaGTCTGGGAGCAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVGASSA*SGSNRL
Trigger: CAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGAGGATATGCTCGTGGTaGCAGGCAGTTTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKRICSW*QAVWAL
Trigger: CAGAGCCCAAACTGCCTGCCACCACGAGCATATCCT...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTTGGATTGGACTGAATaGCAACCAGCCAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGLDWTE*QPASSK
Trigger: TTTGGAGCTGGCTGGTTGCCATTCAGTCCAATCCAA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGAGGTATGTGTTGGATTaGACTGAATGGCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: LPMAPGIEACPGGREWLGRYVLD*TEWQPA
Trigger: GGCTGGTTGCCATTCAGTCCAATCCAACACATACCT...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTAGGTATGTGTTGGATTaGACTGAATGGCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSRYVLD*TEWQPA
Trigger: GGCTGGTTGCCATTCAGTCCAATCCAACACATACCT...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTTCCCAGGAGCCCAGCTaGTCGATCTGTTTTAAAGTA +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVSQEPS*SICFKV
Trigger: TACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGA...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCAGTGAGACTTGCTGCTaGAGTGGAAACAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGSETCC*SGNSQE
Trigger: CTCCTGACTGTTTCCACTTCAGCAGCAAGTCTCACT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCATCTCAATGGCTGGCTTaGTGGGGTACGTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQASQWLA*WGTCSY
Trigger: GTAACTACACGTACCCCATCAAGCCAGCCATTGAGA...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAAGGAGGTAAGGGTTaGACTTCTTCAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: VEHLGGFFSLVWEQSAVPQGGKG*TSSECW
Trigger: CCAACATTCTGAAGAAGTTCAACCCTTACCTCCTTG...CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp CTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGCTCTCGTTCAGTGGGGTaGGTGTGTTTTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LQPGLGAIGCSAGCRGKGSRSVG*VCFGRK
Trigger: CTTTCTTCCAAAACACACTCACCCCACTGAACGAGA...GCCCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCCGCGGTCTGAGAAGTaGAAACAGTCCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSPRSEK*KQSSEK
Trigger: CTTCTCCGAGGACTGTTTTCACTTCTCAGACCGCGG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVGMPAV*EVKTVL
Trigger: GAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR TCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGGTTATTGAAGGAGTTTaGCCTCTCTGCCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKVIEGV*PLCQAA
Trigger: CGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAAC...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTCCTGTTGGATTTGCTaGCCCAGGAGTCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWSCWIC*PRSLIR
Trigger: TCTTATCAGACTCCTGGGTCAGCAAATCCAACAGGA...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCAGGTAACACTGGCTTaGATTACTGAAGAACACATT +
Preference number: 4 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALQVTLA*ITEEHI
Trigger: AATGTGTTCTTCAGTAATGCAAGCCAGTGTTACCTG...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAAGATCCTCAGCCTTTaGTCCGGGAACAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPKILSL*SGNSLI
Trigger: AATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCAGGGTCTCTGTTTTaGTTCCAAGTGGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPGSLF*FQVVQA
Trigger: TGCTTGAACCACTTGGAAGCAAAACAGAGACCCTGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTTGGTCGAGCTCCCACTaGTGTAGTCAGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSWSSSH*CSQRVT
Trigger: GGTGACTCTCTGACTACAGCAGTGGGAGCTCGACCA...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTCCCATCCCCTCCAATaGTCCAAGAGAGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVSHPLQ*SKRVPS
Trigger: GGAGGGGACTCTCTTGGAGCATTGGAGGGGATGGGA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGAAACTGGAGATGCCATaGTGGAGGTTCCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQEKLEMP*WRFQFT
Trigger: AGTGAACTGGAACCTCCAGCATGGCATCTCCAGTTT...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAAACTGGAGATGCCATaGTGGAGGTTCCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPKLEMP*WRFQFT
Trigger: AGTGAACTGGAACCTCCAGCATGGCATCTCCAGTTT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCTTTTGGAAGAAAGGCTaGACCACAACCGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAFWKKG*TTTAKS
Trigger: GGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAA...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTTTGGAAGAAAGGCTaGACCACAACCGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPFWKKG*TTTAKS
Trigger: GGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTTTTGGAAGAAAGGCTaGACCACAACCGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHFWKKG*TTTAKS
Trigger: GGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAA...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp CTTGCGGCCCACTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCTTTTGGAAGAAAGGCTaGACCACAACCGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LAAHWFQHVVPECDGHLGFWKKG*TTTAKS
Trigger: GGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAA...GCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAGTGGGCCGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGAGGCGGCAGCAAAGGTaGTGTCCTGGCTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: VMASRSVRWVSEVFCADVRRQQR*CPGSAT
Trigger: AGTGGCGGAGCCAGGACAGCACCTTTGCTGCCGCCT...CACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTCGCGTATCTATCACCTaGAATGTGGTTCGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVRVSIT*NVVRLL
Trigger: AAGCAGACGAACCACATTGCAGGTGATAGATACGCG...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGGGTTGCATGGGAATaGAGAATTCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPWVAWE*RILQGL
Trigger: GAGACCCTGAAGAATTCTCCATTCCCATGCAACCCA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCACTCTCTTTCCAGTGTaGCACACAGGCATTGGAACA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPTLFPV*HTGIGT
Trigger: TGTTCCAATGCCTGTGTGCCACACTGGAAAGAGAGT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTCTTCAGCACCATCGTaGGGTATGACTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHSSAPS*GMTLFP
Trigger: TGGAAAGAGAGTCATACCCCACGATGGTGCTGAAGA...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCTTCAGCACCATCGTaGGGTATGACTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSSAPS*GMTLFP
Trigger: TGGAAAGAGAGTCATACCCCACGATGGTGCTGAAGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCAGTGTAGAGATGGGGTaGTCTCATAGAAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSVEMG*SHRRKA
Trigger: AGCCTTTCTTCTATGAGACCACCCCATCTCTACACT...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGATCTTTCTCTCCTGCTaGCTCCATCATCCTATTCCA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRIFLSC*LHHPIP
Trigger: TGGAATAGGATGATGGAGCCAGCAGGAGAGAAAGAT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCATCTTTCTCTCCTGCTaGCTCCATCATCCTATTCCA +
Preference number: 4 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGIFLSC*LHHPIP
Trigger: TGGAATAGGATGATGGAGCCAGCAGGAGAGAAAGAT...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGAGGGACACTTCATTaGCCTCCCGTGTTTTACACT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRGTLH*PPVFYT
Trigger: AGTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAGGGGTTTCTGCAGTCTaGTCAGGTAGTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQAGVSAV*SGSCCF
Trigger: GAAACAGCAACTACCTGACCAGACTGCAGAAACCCC...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGTCCTTCCGAGGTCTTTaGCATGTCCACGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWSFRGL*HVHVFK
Trigger: TTTGAAAACGTGGACATGCCAAAGACCTCGGAAGGA...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGTGTTCCAGAGAGCACTaGCTGCTCGGGAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALCSREH*LLGSET
Trigger: AGTCTCACTCCCGAGCAGCCAGTGCTCTCTGGAACA...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGTCCTCAGAAACGGCTaGACCTGGTTCGGACATGTG +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSVLRNG*TWFGHV
Trigger: CACATGTCCGAACCAGGTCCAGCCGTTTCTGAGGAC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAATCAGAGTTTGGACTTaGCTCATAAGATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAIRVWT*LIRSSA
Trigger: GGCTGAGGATCTTATGAGCCAAGTCCAAACTCTGAT...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGATCAGAGTTTGGACTTaGCTCATAAGATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRIRVWT*LIRSSA
Trigger: GGCTGAGGATCTTATGAGCCAAGTCCAAACTCTGAT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGGGAGCTGGATGTTCTaGAAGAAGGGCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVGSWMF*KKGCST
Trigger: GGTGCTGCAGCCCTTCTTCCAGAACATCCAGCTCCC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGGTTGGAACACTATTaGAAGCCTTCCACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRRLEHY*KPSTLY
Trigger: GTACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCACTTTGATGTCTGCTaGTCGGAGCTGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKHFDVC*SELVDR
Trigger: TCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTG...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGTCCCCTCCAAGATGTaGGTAGGTCACTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LLQPGLGAIGCSAGCRGKVPSKM*VGHWSC
Trigger: ACAACTCCAGTGACCTACCCACATCTTGGAGGGGAC...CTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGACTTCTTCAGAATGTTaGGCAGTGTGGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGTSSEC*AVWCES
Trigger: AGACTCACACCACACTGCCCAACATTCTGAAGAAGT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGACTTCTTCAGAATGTTaGGCAGTGTGGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRTSSEC*AVWCES
Trigger: AGACTCACACCACACTGCCCAACATTCTGAAGAAGT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCGTTGACGAAAGCCCTTaGGAGCTCCTCAGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HLSLARLWVKLLEVVLRPVDESP*ELLRED
Trigger: ATCCTCTCTGAGGAGCTCCCAAGGGCTTTCGTCAAC...GGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGCTGGAGATGCCATGCTaGAGGTTCCAGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: RLWVKLLEVVLRPTGSSMLEMPC*RFQFTF
Trigger: GAAAGTGAACTGGAACCTCCAGCATGGCATCTCCAG...CATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGGCCAGTAGGAGAAACTaGAGATGCCATGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKASRRN*RCHAGG
Trigger: ACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGC...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGGGGTGAGTGTGTTTTaGAAGAAAGGCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGGVSVF*KKGCTT
Trigger: TGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAGTTTGGCTCGGCTGTaGGTGAAGTTGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQASLARL*VKLLEV
Trigger: TACCTCCAACAACTTCACCCACAGCCGAGCCAAACT...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ACGTGTAGTTACTATTCCGAGGGGTTCTCAGGAAGGGCTCATTCTGAGTGGGACGGGGCTTCTTCAGCCTaGTCTGGGAGCAATCGGCTG +
Preference number: 4 (lower is better)
Translates to: TCSYYSEGFSGRAHSEWDGASSA*SGSNRL
Trigger: CAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCC...GTCCCACTCAGAATGAGCCCTTCCTGAGAACCCCTCGGAATAGTAACTACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGGTGCCAGTAGGAGAAGTTGTGACTGTCCCCTaGGCTTCCTATGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LHHNRKVLTLCVLVPVGEVVTVP*ASYGTR
Trigger: CCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAAC...TTCTCCTACTGGCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGGCAGCTCCCACACCTaGGCTGCACAAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVGSSHT*AAQEME
Trigger: TTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTCTAGTTGTTTTCCCGCAAAGGTGCTGTCCTaGCTCCGCCACTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: PLISTLPPCGQLRSSCFPAKVLS*LRHSLA
Trigger: TGCTAATGAGTGGCGGAGCCAGGACAGCACCTTTGC...GGGAAAACAACTAGAACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp GAGAGTCCCCTCCAAGATGTGGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACTGCTGTAGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ESPLQDVGRSLE*FGRAPTAVVRE
Trigger: CTCTCTGACTACAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACCTACCCACATCTTGGAGGGGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR TCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCGAAGGCTTCAGAGAGTaGACTGATTTAGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGEGFRE*TDLEGI
Trigger: TATGCCTTCTAAATCAGTTCACTCTCTGAAGCCTTC...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGAAGGCTTCAGAGAGTaGACTGATTTAGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKEGFRE*TDLEGI
Trigger: TATGCCTTCTAAATCAGTTCACTCTCTGAAGCCTTC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCATATCTGATGATGTCTaGAAGGACTGTCATCACTCC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGISDDV*KDCHHS
Trigger: GGAGTGATGACAGTCCTTTCAGACATCATCAGATAT...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGATATCTGATGATGTCTaGAAGGACTGTCATCACTCC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRISDDV*KDCHHS
Trigger: GGAGTGATGACAGTCCTTTCAGACATCATCAGATAT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGCTTCCAGTCAAATTaGAAGTCAAGTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSFQSN*KSSCRF
Trigger: GAACCTGCAACTTGACTTTCAATTTGACTGGAAGCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAACCGGGTGGTCTCCTCTaGGCAATTACAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKPGGLL*AITGLW
Trigger: CCAGAGCCCTGTAATTGCTCAGAGGAGACCACCCGG...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCTTTGTCAGGACATCTaGTTTCCGCTCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLCQDI*FPLLLL
Trigger: TAAGAGAAGGAGCGGAAATCAGATGTCCTGACAAAG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGGTGGGTCTTCTCCTaGAACTTCTTGTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPWWVFS*NFLLNS
Trigger: CGAATTCAACAAGAAGTTTCAGGAGAAGACCCACCA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTTGTTTTCAAACTTATaGCGAGTCGTCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLFSNL*RVVFWP
Trigger: TGGCCAGAAGACGACTCGTCATAAGTTTGAAAACAA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCATTGTTTTCAAACTTATaGCGAGTCGTCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVALFSNL*RVVFWP
Trigger: TGGCCAGAAGACGACTCGTCATAAGTTTGAAAACAA...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTCCGGGAACAGCTTaGTTGAGGAATGCATTCGTG +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSAPGTA*LRNAFV
Trigger: CACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCAAGGAGGTAAGGGTTaGACTTCTTCAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPQGGKG*TSSECW
Trigger: CCAACATTCTGAAGAAGTTCAACCCTTACCTCCTTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAGTCTTTCTCCAGGTTaGTGTCGGGGCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSHTWAAQEMEGECFTQASLSPG*CRGCFS
Trigger: TGAAAAACAGCCCCGACATCAACCTGGAGAAAGACT...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCCTGTTGGATGTGCTaGACATATTCCGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSACWMC*TYSVAK
Trigger: CTTGGCCACGGAATATGTTCAGCACATCCAACAGGC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTCTCGTTCAGTGGGGTaGGTGTGTTTTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGSRSVG*VCFGRK
Trigger: CTTTCTTCCAAAACACACTCACCCCACTGAACGAGA...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTTGTGGTTCGTCTGCTTaGTTTTTGTTTCCCATGCTA +
Preference number: 4 (lower is better)
Translates to: LSWLRHSLARCPLVASFVCGSSA*FLFPML
Trigger: TAGCATGGGAAACAAAAATCAAGCAGACGAACCACA...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCTCATCTTTCTCTCCTaGTGGCTCCATCATCCTATT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLIFLS*WLHHPI
Trigger: AATAGGATGATGGAGCCAGCAGGAGAGAAAGATGAG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCACAACTTGGATGTCTaGAGGTCTCAGGGCATGCAC +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSHNLDV*RSQGMH
Trigger: GTGCATGCCCTGAGACCTGCAGACATCCAAGTTGTG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGCTTGATTGAGGAATaGATTCGTGTCATTGGCATC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSLIEE*IRVIGI
Trigger: GATGCCAATGACACGAATGCATTCCTCAATCAAGCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCAAGATCCTCAGCCTTTaGTCCGGGAACAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGKILSL*SGNSLI
Trigger: AATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTCTGATTTGGGTGGATaGAGTCTGGGGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKSDLGG*SLGQRR
Trigger: CCTTCTTTGCCCCAGACTGCATCCACCCAAATCAGA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000422425.6
ENST00000444257.5
CDS-3UTR GCA 90 bp CACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCTCTGATTTGGGTGGATaGAGTCTGGGGCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HLSLARLWVKLLEVVLRPSDLGG*SLGQRR
Trigger: CCTTCTTTGCCCCAGACTGCATCCACCCAAATCAGA...GGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATAAACTGGAGATGCCATaGTGGAGGTTCCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDKLEMP*WRFQFT
Trigger: AGTGAACTGGAACCTCCAGCATGGCATCTCCAGTTT...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGGTGACTTGAGGATATaGTCGTGGTGGCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSGDLRI*SWWQAV
Trigger: AACTGCCTGCCACCACGAGCATATCCTCAAGTCACC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGTGTAGAGATGGGGTaGTCTCATAGAAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSVEMG*SHRRKA
Trigger: AGCCTTTCTTCTATGAGACCACCCCATCTCTACACT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGCCTATGAACTGAGGTaGGAACCGTATCGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVAYELR*EPYRRG
Trigger: ACCCCTCCGATACGGTTCCCACCTCAGTTCATAGGC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACAGACGTTCCCAGGTGTaGACCCGGCCCCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: FISESQEPSWSICFKVGHRRSQV*TRPHCL
Trigger: CAGGCAATGGGGCCGGGTCCACACCTGGGAACGTCT...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCCTTCCGAGGTCTTTaGCATGTCCACGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSFRGL*HVHVFK
Trigger: TTTGAAAACGTGGACATGCCAAAGACCTCGGAAGGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGGACTTGCTGCTGAAGTaGAAACAGTCAGGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKDLLLK*KQSGAK
Trigger: CTTCGCTCCTGACTGTTTCCACTTCAGCAGCAAGTC...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTGTTCCAGAGAGCACTaGCTGCTCGGGAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVCSREH*LLGSET
Trigger: AGTCTCACTCCCGAGCAGCCAGTGCTCTCTGGAACA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATAGAAACGGCTGGACCTaGTTCGGACATGTGATATTG +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDRNGWT*FGHVIL
Trigger: CAATATCACATGTCCGAACCAGGTCCAGCCGTTTCT...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGATGGTGAACAAAGTTaGCTGCAGAATACAGATTCG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRDGEQS*LQNTDS
Trigger: CGAATCTGTATTCTGCAGCCAACTTTGTTCACCATC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGATGGTGAACAAAGTTaGCTGCAGAATACAGATTCG +
Preference number: 4 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSDGEQS*LQNTDS
Trigger: CGAATCTGTATTCTGCAGCCAACTTTGTTCACCATC...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTTGGGTGGATGCAGTCTaGGGCAAAGAAGGACGTATC +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSWVDAV*GKEGRI
Trigger: GATACGTCCTTCTTTGCCCCAGACTGCATCCACCCA...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACCCAGTTCTCAATGGCTaGCTTGATGGGGTACGTGTA +
Preference number: 4 (lower is better)
Translates to: LEFGSAVGEVVGGSLAAHPVLNG*LDGVRV
Trigger: TACACGTACCCCATCAAGCCAGCCATTGAGAACTGG...GTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp TGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGGTGCTCTGCTGGTCGGAGCTaGTGGACAGAGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: WKKGCTTTAKSSRCVYWCSAGRS*WTEVGT
Trigger: TGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGA...GCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTATGTGGGTAGGTCACTaGAGTTGTTTGGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRRGALEFGSAVGEVVGGMWVGH*SCLVEL
Trigger: GAGCTCGACCAAACAACTCCAGTGACCTACCCACAT...ACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CTCAGGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTGAATGTTGGGCAGTGTaGTGTGAGTCTCCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LRRGALEFGSAVGEVVGGECWAV*CESPSS
Trigger: GGAACTTGGAGACTCACACCACACTGCCCAACATTC...ACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTATTCCGTGGCCAAGTaGGCCTCCGGATTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVYSVAK*ASGFSQ
Trigger: CTGTGAGAATCCGGAGGCCCACTTGGCCACGGAATA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGTTGACGAAAGCCCTTaGGAGCTCCTCAGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSVDESP*ELLRED
Trigger: ATCCTCTCTGAGGAGCTCCCAAGGGCTTTCGTCAAC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCCAGTTCTGAGCTGCCAGCATaGCACATTTCCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VCIGASRRNWRCHAGGSSSELPA*HISRLG
Trigger: GCCAAGGCGGGAAATGTGCCATGCTGGCAGCTCAGA...ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGTCTGAGCTGCCAGCATaGCACATTTCCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQSELPA*HISRLG
Trigger: GCCAAGGCGGGAAATGTGCCATGCTGGCAGCTCAGA...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCCAGTAGGAGAAACTaGAGATGCCATGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSASRRN*RCHAGG
Trigger: ACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCTCCAATGCTCCAAGAGAGTCCCCTCCAAGATGTGGGTAGGTCACTGGAGTTGGCCAGTAGGAGAAACTaGAGATGCCATGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPMLQESPLQDVGRSLELASRRN*RCHAGG
Trigger: ACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGC...CAACTCCAGTGACCTACCCACATCTTGGAGGGGACTCTCTTGGAGCATTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCCCTCTCTCGTTCAGTaGGGTGAGTGTGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKPSLVQ*GECVLE
Trigger: TTCCAAAACACACTCACCCCACTGAACGAGAGAGGG...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGCCCTCTCTCGTTCAGTaGGGTGAGTGTGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GALEFGSAVGEVVGGSLAPSLVQ*GECVLE
Trigger: TTCCAAAACACACTCACCCCACTGAACGAGAGAGGG...CGCAAGACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GTTTTGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGTGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: VLEERLHHNRKVLTLCVLCSRVR*PSRHAR
Trigger: GCGGGCATGCCGAGATGGCCATCGCACTCTGGAACA...CAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GGAGAGGGGCACTTGAGTTTGGCTCGGCTGTGGGTGAAGTTGTTGGAGGTAGTCAGTTTGGCTCGGCTGTaGGTGAAGTTGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GEGHLSLARLWVKLLEVVSLARL*VKLLEV
Trigger: TACCTCCAACAACTTCACCCACAGCCGAGCCAAACT...GACTACCTCCAACAACTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGAGTTTGGCTCGGCTGTaGGTGAAGTTGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: FFSLVWEQSAVPQGVEVRSLARL*VKLLEV
Trigger: TACCTCCAACAACTTCACCCACAGCCGAGCCAAACT...CCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTCTCTCGTTCAGTGGGGTGAGTGTGTTTTGGAAGAAAGGCTGCACCACAACCTTCTTCAGCCTGGTCTaGGAGCAATCGGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: PLSFSGVSVFWKKGCTTTFFSLV*EQSAVP
Trigger: CGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA...GGTTGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCACTGAACGAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGGGCTGCACAAGAGATaGAAGGTGAGTGCTTCACGC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVGLHKR*KVSASR
Trigger: GCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCCATCACGTGGCTTCTTaGTTATTGAAGGAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGHHVAS*LLKEFD
Trigger: GTCAAACTCCTTCAATAACCAAGAAGCCACGTGATG...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CAA 72 bp GCTGGTCGGAGCTGGTGGACAGAGGTTGGAACACTATaGGAAGCCTTCCACTCTGTACACAGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: AGRSWWTEVGTL*EAFHSVHRKSL
Trigger: CAGTGACTTCCTGTGTACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAGCTCCGACCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR TCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTTCAGAGAGTGAACTaGTTTAGAAGGCATATTCAC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLQRVN*FRRHIH
Trigger: GTGAATATGCCTTCTAAATCAGTTCACTCTCTGAAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGAAGGCTTCAGAGAGTaGACTGATTTAGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPEGFRE*TDLEGI
Trigger: TATGCCTTCTAAATCAGTTCACTCTCTGAAGCCTTC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGGCTGGAAAACCACGGTaGAGGACTCCTGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQAGKPR*RTPAHC
Trigger: ACAGTGAGCAGGAGTCCTTCACCGTGGTTTTCCAGC...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAAGACAGGCCTCGGTACTaGGTCAAGACGTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKDRPRY*VKTSKT
Trigger: CGTCTTGGACGTCTTGACTCAGTACCGAGGCCTGTC...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACCTGGCTGCTCGGGAGTaGGACTTGCTGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FISESQEPSWSICFKVGHLAARE*DLLLKW
Trigger: CCACTTCAGCAGCAAGTCTCACTCCCGAGCAGCCAG...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTGTTTTCAAACTTATaGCGAGTCGTCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLFSNL*RVVFWP
Trigger: TGGCCAGAAGACGACTCGTCATAAGTTTGAAAACAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATCAAGGAGGTAAGGGTTaGACTTCTTCAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDQGGKG*TSSECW
Trigger: CCAACATTCTGAAGAAGTTCAACCCTTACCTCCTTG...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGGTGCCAAGTGCAGTTGTTCTaGGCTGCCAGCATGGCACAT +
Preference number: 4 (lower is better)
Translates to: WKKGCTTTAKSSRCVYWCQVQLF*AASMAH
Trigger: ATGTGCCATGCTGGCAGCTCAGAACAACTGCACTTG...GCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAATATGGCACCAGGCATTaGAGCATGTCCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKYGTRH*SMSWWP
Trigger: CGGCCACCAGGACATGCTTCAATGCCTGGTGCCATA...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTACAAGAGATGGAAGGTaGGTGCTTCACGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSTRDGR*VLHAGK
Trigger: TTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGT...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGTTAGGACCAGGTACCTaGCCAAGGACTTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALLGPGT*PRTCGN
Trigger: GTTTCCACAAGTCCTTGGTCAGGTACCTGGTCCTAA...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCCAGGTAACACTGGCTTaGATTACTGAAGAACACATT +
Preference number: 4 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGQVTLA*ITEEHI
Trigger: AATGTGTTCTTCAGTAATGCAAGCCAGTGTTACCTG...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCAGGTAACACTGGCTTaGATTACTGAAGAACACATT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRQVTLA*ITEEHI
Trigger: AATGTGTTCTTCAGTAATGCAAGCCAGTGTTACCTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATAGCTTGATTGAGGAATaGATTCGTGTCATTGGCATC +
Preference number: 4 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHSLIEE*IRVIGI
Trigger: GATGCCAATGACACGAATGCATTCCTCAATCAAGCT...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGACAGATTCGAATCTGTaGAGTAGTCACATAAATCGC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRTDSNL*SSHINR
Trigger: GCGATTTATGTGACTACTGCACAGATTCGAATCTGT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAACAGATTCGAATCTGTaGAGTAGTCACATAAATCGC +
Preference number: 4 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKTDSNL*SSHINR
Trigger: GCGATTTATGTGACTACTGCACAGATTCGAATCTGT...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGTGAACAAAGTTGGCTaGAGAATACAGATTCGAATC +
Preference number: 4 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGVNKVG*RIQIRI
Trigger: GATTCGAATCTGTATTCTGCAGCCAACTTTGTTCAC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGTGAACAAAGTTGGCTaGAGAATACAGATTCGAATC +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRVNKVG*RIQIRI
Trigger: GATTCGAATCTGTATTCTGCAGCCAACTTTGTTCAC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp ACGTGTAGTTACTATTCCGAGGGGTTCTCAGGAAGGGCTCATTCTGAGTGGGACCTGGGCACCTCTCTATaGAGGACGTCCAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: TCSYYSEGFSGRAHSEWDLGTSL*RTSKAL
Trigger: CAATGCCTTGGACGTCCTGCATAGAGAGGTGCCCAG...GTCCCACTCAGAATGAGCCCTTCCTGAGAACCCCTCGGAATAGTAACTACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCATGACATGTGAAGGTTaGTCTCCCCCAAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPMTCEG*SPPRNF
Trigger: AAAGTTTCTTGGGGGAGAGCAACCTTCACATGTCAT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTGGGTTGCATGGGAATaGAGAATTCTTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKWVAWE*RILQGL
Trigger: GAGACCCTGAAGAATTCTCCATTCCCATGCAACCCA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCGTCCTCAGAAACGGCTaGACCTGGTTCGGACATGTG +
Preference number: 4 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLVLRNG*TWFGHV
Trigger: CACATGTCCGAACCAGGTCCAGCCGTTTCTGAGGAC...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCATCAGAGTTTGGACTTaGCTCATAAGATCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGIRVWT*LIRSSA
Trigger: GGCTGAGGATCTTATGAGCCAAGTCCAAACTCTGAT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTCTGCATCAGAGTTTaGACTTGGCTCATAAGATCC +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPFCIRV*TWLIRS
Trigger: GGATCTTATGAGCCAAGTCCAAACTCTGATGCAGAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCTTCTGCATCAGAGTTTaGACTTGGCTCATAAGATCC +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAFCIRV*TWLIRS
Trigger: GGATCTTATGAGCCAAGTCCAAACTCTGATGCAGAA...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGATGGTGAACAAAGTTaGCTGCAGAATACAGATTCG +
Preference number: 4 (lower is better)
Translates to: DCPLGFLWHQALKHVLVADGEQS*LQNTDS
Trigger: CGAATCTGTATTCTGCAGCCAACTTTGTTCACCATC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTGGGTGGATGCAGTCTaGGGCAAAGAAGGACGTATC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVWVDAV*GKEGRI
Trigger: GATACGTCCTTCTTTGCCCCAGACTGCATCCACCCA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTGTTTTGCTTCCAAGTaGTTCAAGCATATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRCFASK*FKHIGP
Trigger: TGGACCAATATGCTTGAACCACTTGGAAGCAAAACA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTATGTGGGTAGGTCACTaGAGTTGTTTGGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSMWVGH*SCLVEL
Trigger: GAGCTCGACCAAACAACTCCAGTGACCTACCCACAT...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCACTTCTTCAGAATGTTaGGCAGTGTGGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGTSSEC*AVWCES
Trigger: AGACTCACACCACACTGCCCAACATTCTGAAGAAGT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTAGTTTGGCTCGGCTGTaGGTGAAGTTGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSSLARL*VKLLEV
Trigger: TACCTCCAACAACTTCACCCACAGCCGAGCCAAACT...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTGGAGGTTCCAGTTCACTTTCTTCAGTTCTTGCTTCTCCAGGGAGCTTTGCGCCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: AGGSSSLSSVLASPGSFAPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...CGCAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTGAACTGGAACCTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGATTGTGATTGTGTCTTaGTTATGGCCTCTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWIVIVS*LWPLEV
Trigger: CACTTCGAGAGGCCATAACCAAGACACAATCACAAT...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTGAAGAAACAGAGCAATaGCTGAATTTTCCCATCGCT +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVEETEQ*LNFPIA
Trigger: AGCGATGGGAAAATTCAGCCATTGCTCTGTTTCTTC...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp GCCATGCTGGAGGTTCCAGTTCACTTTCTTCAGTTCTaGCTTCTCCAGGGAGCTTTGCGAGTGTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: AMLEVPVHFLQF*LLQGALRVSEA
Trigger: TGCCTCAGACACTCGCAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTGAACTGGAACCTCCAGCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCATATCTGATGATGTCTaGAAGGACTGTCATCACTCC +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGISDDV*KDCHHS
Trigger: GGAGTGATGACAGTCCTTTCAGACATCATCAGATAT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCTTTGTCAGGACATCTaGTTTCCGCTCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKLCQDI*FPLLLL
Trigger: TAAGAGAAGGAGCGGAAATCAGATGTCCTGACAAAG...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACGGGCTCCAATTACGTTaGTGTCAGCCGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FISESQEPSWSICFKVGHGLQLR*CQPASA
Trigger: GGCTGAAGCCGGCTGACATCAACGTAATTGGAGCCC...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTGGTGGGTCTTCTCCTaGAACTTCTTGTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKWWVFS*NFLLNS
Trigger: CGAATTCAACAAGAAGTTTCAGGAGAAGACCCACCA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTGGCAGCCAGGTCCCATaGCCCTGCATGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCGSQVP*PCMLFL
Trigger: CAAGAACAGCATGCAGGGTCATGGGACCTGGCTGCC...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAATCTGAGTGGGACAGGTaGTGGGCATCTCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKSEWDR*WASLLS
Trigger: TGAGAGCAGAGATGCCCATCACCTGTCCCACTCAGA...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTCTCAATGGCTGGCTTaGTGGGGTACGTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVSQWLA*WGTCSY
Trigger: GTAACTACACGTACCCCATCAAGCCAGCCATTGAGA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR TCA 90 bp GCTGGCCAAAGCTGGAACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTTGACTGACCTCTGTTCTTaGGAGGTTGATGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: AGQSWNRSLQNLTGQGALTDLCS*EVDVLM
Trigger: CATGAGGACATCAACCTCTCAAGAACAGAGGTCAGT...CAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTTCCAGCTTTGGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCAGATTGCCAATGGCTaGCACAAATTTAATATCAGA +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWQIANG*HKFNIR
Trigger: TCTGATATTAAATTTGTGGCAGCCATTGGCAATCTG...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCAGATTGCCAATGGCTaGCACAAATTTAATATCAGA +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRQIANG*HKFNIR
Trigger: TCTGATATTAAATTTGTGGCAGCCATTGGCAATCTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACACCCGGCCCCATTGCCTaGCGTGAGAGAGTCACCCAG +
Preference number: 4 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTPGPIA*RERVTQ
Trigger: CTGGGTGACTCTCTCACGGCAGGCAATGGGGCCGGG...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGCACAACTTGGATGTCTaGAGGTCTCAGGGCATGCAC +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQHNLDV*RSQGMH
Trigger: GTGCATGCCCTGAGACCTGCAGACATCCAAGTTGTG...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGGTGAACAAAGTTGGCTaGAGAATACAGATTCGAATC +
Preference number: 4 (lower is better)
Translates to: CWRQATKSGSSHTWAAQEVNKVG*RIQIRI
Trigger: GATTCGAATCTGTATTCTGCAGCCAACTTTGTTCAC...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp ACGTGTAGTTACTATTCCGAGGGGTTCTCAGGAAGGGCTCATTCTGAGTGGGACTTTCCCAGGAACACCTaGCGCATGATAGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TCSYYSEGFSGRAHSEWDFPRNT*RMIVGF
Trigger: GAACCCCACTATCATGCGGCAGGTGTTCCTGGGAAA...GTCCCACTCAGAATGAGCCCTTCCTGAGAACCCCTCGGAATAGTAACTACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR GCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAATGGTCGAGCTCCCACTaGTGTAGTCAGAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKWSSSH*CSQRVT
Trigger: GGTGACTCTCTGACTACAGCAGTGGGAGCTCGACCA...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCAGGAGAAACTGGAGATaGCATGCTGGAGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVRRNWR*HAGGSS
Trigger: ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCT...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR GCA 90 bp GCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTTTTTGGAAGAAAGGCTaGACCACAACCGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: AVGEVVGGSLAAHWFQHVFWKKG*TTTAKS
Trigger: GGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAA...AACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp ACGCTGTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCATGTTGTTCCAGAGTaGGATGGCCATCTCGGCATG +
Preference number: 4 (lower is better)
Translates to: TLCVLVPVGETGDAMLEVHVVPE*DGHLGM
Trigger: CATGCCGAGATGGCCATCGCACTCTGGAACAACATG...AACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACACAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCCAGTCATGTTGTTCCAGAGTaGGATGGCCATCTCGGCATG +
Preference number: 4 (lower is better)
Translates to: VCIGASRRNWRCHAGGSSHVVPE*DGHLGM
Trigger: CATGCCGAGATGGCCATCGCACTCTGGAACAACATG...ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACACTCACTTCCCCAGGCTaGCCCACCAGGTGCACGTCG +
Preference number: 4 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTLTSPG*PTRCTS
Trigger: CGACGTGCACCTGGTGGGGCAGCCTGGGGAAGTGAG...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCATTTATTTGGGTTGCATaGGAATGGAGAATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAFIWVA*EWRILQ
Trigger: CTGAAGAATTCTCCATTCCCATGCAACCCAAATAAA...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTTTATTTGGGTTGCATaGGAATGGAGAATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRFIWVA*EWRILQ
Trigger: CTGAAGAATTCTCCATTCCCATGCAACCCAAATAAA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGCATGCACACCTGCTGTaGCCTTTCAGTCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQHAHLL*PFSPVL
Trigger: CAAGACTGGACTGAAAGGCCACAGCAGGTGTGCATG...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TATCTACACGCAACCGCTCGCCTGACACACCCTGAGCTTCTCCACTTCCGTGTTAGAGGGACACTTCATTaGCCTCCCGTGTTTTACACT +
Preference number: 4 (lower is better)
Translates to: YLHATARLTHPELLHFRVRGTLH*PPVFYT
Trigger: AGTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCT...AACACGGAAGTGGAGAAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCATCGGGGAGGTCGTCTaGTTTGGAGCCAATTCCATT +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVIGEVV*FGANSI
Trigger: AATGGAATTGGCTCCAAACCAGACGACCTCCCCGAT...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGAGATGCCATGCTaGAGGTTCCAGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVLEMPC*RFQFTF
Trigger: GAAAGTGAACTGGAACCTCCAGCATGGCATCTCCAG...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAACCCCTGGGCTTCCTATaGCACCAGGCATTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKPLGFL*HQALKH
Trigger: ATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGG...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTTTGGATTGGACTGAATaGCAACCAGCCAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSLDWTE*QPASSK
Trigger: TTTGGAGCTGGCTGGTTGCCATTCAGTCCAATCCAA...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTGAAGATTCAGGGATTTaGTGCTTTTCTGGTGCATTT +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVEDSGI*CFSGAF
Trigger: AAATGCACCAGAAAAGCACCAAATCCCTGAATCTTC...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTGGTCCTCGTTGTGGGTaGTACAGGCCGAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCGPRCG*YRPSDG
Trigger: GCCATCACTCGGCCTGTACCACCCACAACGAGGACC...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGCTGGCTGCTCGGGAGTaGGACTTGCTGCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWLAARE*DLLLKW
Trigger: CCACTTCAGCAGCAAGTCTCACTCCCGAGCAGCCAG...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGGGAAGTCCACGAGGTTaGCCAGGACTCTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMGSPRG*PGLWAP
Trigger: AGGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCC...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGAGACCACTGTCCCGATaGTGCCCACCACAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWRPLSR*CPPQGR
Trigger: TCGGCCTTGTGGTGGGCATCATCGGGACAGTGGTCT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTAATTTATTTGGGTTaGATGGGAATGGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLIYLG*MGMENS
Trigger: AGAATTCTCCATTCCCATGCAACCCAAATAAATTAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTAATTTATTTGGGTTaGATGGGAATGGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: PGLPMAPGIEACPGGREWLIYLG*MGMENS
Trigger: AGAATTCTCCATTCCCATGCAACCCAAATAAATTAG...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTTTCAAAGAACGGCTaGACAACCACAGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPFSKNG*TTTVKS
Trigger: AGATTTTACTGTGGTTGTGCAGCCGTTCTTTGAAAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCTCCCATGACCCTGCATaGTGTTCTTGTAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLSHDPA*CSCRSS
Trigger: TGAGGACCTACAAGAACAGCATGCAGGGTCATGGGA...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp TGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGGTGCAAACTGGAGATGCCATaGTGGAGGTTCCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: WKKGCTTTAKSSRCVYWCKLEMP*WRFQFT
Trigger: AGTGAACTGGAACCTCCAGCATGGCATCTCCAGTTT...GCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGATGACATGTGAAGGTTaGTCTCCCCCAAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: APRSCDCPLGFLWHQALKMTCEG*SPPRNF
Trigger: AAAGTTTCTTGGGGGAGAGCAACCTTCACATGTCAT...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTGATTTTTGTTTCCCATaGTATCGTATGAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: PQAAPPGARRVSITCNVVDFCFP*YRMRSL
Trigger: CAATGACCTCATACGATAGCATGGGAAACAAAAATC...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTCTTCAGCACCATCGTaGGGTATGACTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVSSAPS*GMTLFP
Trigger: TGGAAAGAGAGTCATACCCCACGATGGTGCTGAAGA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGAGCGTGGTAGAATCCTaGAGTCGGGGGTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWSVVES*SRGSSE
Trigger: CTCGGAGGACCCCCGACTCCAGGATTCTACCACGCT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGAGCCTGGCTAGCTCTTaGGAGTTCTCCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMSLASS*EFSRRV
Trigger: GACCCTGCGGGAGAACTCCCAAGAGCTAGCCAGGCT...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGAGCCTGGCTAGCTCTTaGGAGTTCTCCCGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWSLASS*EFSRRV
Trigger: GACCCTGCGGGAGAACTCCCAAGAGCTAGCCAGGCT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCCAGTCCAGTTCTCAATGGCTaGCTTGATGGGGTACGTGTA +
Preference number: 4 (lower is better)
Translates to: VCIGASRRNWRCHAGGSSPVLNG*LDGVRV
Trigger: TACACGTACCCCATCAAGCCAGCCATTGAGAACTGG...ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTACTTCTTCAGAATGTTaGGCAGTGTGGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: AVGEVVGGSLAAHWFQHVTSSEC*AVWCES
Trigger: AGACTCACACCACACTGCCCAACATTCTGAAGAAGT...AACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAATTGAGGATATGCTCGTaGTGGCAGGCAGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKLRICS*WQAVWA
Trigger: AGCCCAAACTGCCTGCCACCACGAGCATATCCTCAA...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGCCTTTACCCCCTCCCTaGGCTTTTGTGCAGCATAAA +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQPLPPP*AFVQHK
Trigger: TTTATGCTGCACAAAAGCCCAGGGAGGGGGTAAAGG...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR CCA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGGCGAACTTATTTCAATaGAAGAAAAGGCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWANLFQ*KKRQCS
Trigger: AGAGCATTGCCTTTTCTTCCATTGAAATAAGTTCGC...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp AACCGTTCACTACAGAATCTCACAGGTCAAGGGGCCTaGGAAATATTCACAGCCGAGCCTCTTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: NRSLQNLTGQGA*EIFTAEPLLQV
Trigger: GACCTGCAGAAGAGGCTCGGCTGTGAATATTTCCAAGGCCCCTTGACCTGTGAGATTCTGTAGTGAACGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp AAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATaGTTAAGCTGGCCAAAGCTGGAACCGTTCACTACA +
Preference number: 4 (lower is better)
Translates to: KGNALKTLGPST*LSWPKLEPFTT
Trigger: TGTAGTGAACGGTTCCAGCTTTGGCCAGCTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGGACAGGCCTCGGTACTaGGTCAAGACGTCCAAGACG +
Preference number: 4 (lower is better)
Translates to: LFSQVNSELLATYFEAYRDRPRY*VKTSKT
Trigger: CGTCTTGGACGTCTTGACTCAGTACCGAGGCCTGTC...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTAGGGACACAGAGACCTaGGGATCATCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCRDTET*GSSLGS
Trigger: ACTGCCCAAGGATGATCCTCAGGTCTCTGTGTCCCT...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp TTGCTTCTCCAGGGAGCTTTGCGAGTGTCTGAGGCAAGTGCAGTTGTTCTGAGCCAAGGAGGTAAGGGTTaGACTTCTTCAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LLLQGALRVSEASAVVLSQGGKG*TSSECW
Trigger: CCAACATTCTGAAGAAGTTCAACCCTTACCTCCTTG...GCTCAGAACAACTGCACTTGCCTCAGACACTCGCAAAGCTCCCTGGAGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR TCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGAGTCTTTCTCCAGGTTaGTGTCGGGGCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQSLSPG*CRGCFS
Trigger: TGAAAAACAGCCCCGACATCAACCTGGAGAAAGACT...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGTCTCGTTCAGTGGGGTaGGTGTGTTTTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQSRSVG*VCFGRK
Trigger: CTTTCTTCCAAAACACACTCACCCCACTGAACGAGA...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGGGCATGCCCGCGGTCTaGGAAGTGAAAACAGTCCTC +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMGMPAV*EVKTVL
Trigger: GAGGACTGTTTTCACTTCTCAGACCGCGGGCATGCC...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCCTGTTCTTGAGAGGTTaGTGTCCTCATGCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLLFLRG*CPHAKD
Trigger: GTCCTTAGCATGAGGACATCAACCTCTCAAGAACAG...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCTAATTTATTTGGGTTaGATGGGAATGGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLIYLG*MGMENS
Trigger: AGAATTCTCCATTCCCATGCAACCCAAATAAATTAG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR GCA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTTTCAAAGAACGGCTaGACAACCACAGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: DLRICSWWQAVWALVGRGFSKNG*TTTVKS
Trigger: AGATTTTACTGTGGTTGTGCAGCCGTTCTTTGAAAA...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTAAGGGGCTCTGTCCCTaGATGGCAGCCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCKGLCP*MAARSH
Trigger: ATGGGACCTGGCTGCCATGCAGGGACAGAGCCCCTT...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGAAAACGCTGGCCTGCTaGACTGGGCACTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWKTLAC*TGHLSG
Trigger: CCCAGACAAGTGCCCAGTGCAGCAGGCCAGCGTTTT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCCAGTCCAGGGTCTCTGTTTTaGTTCCAAGTGGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: VCIGASRRNWRCHAGGSSPGSLF*FQVVQA
Trigger: TGCTTGAACCACTTGGAAGCAAAACAGAGACCCTGG...ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR GCA 90 bp AGTGTGACCAGCTTCCAGTCTTTCTCCAGGTTGATGTCGGGGCTGTTTTTCATTGCAGTTGTTCTGAGCTaGCAGCATGGCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: SVTSFQSFSRLMSGLFFIAVVLS*QHGTFP
Trigger: GGGAAATGTGCCATGCTGGCAGCTCAGAACAACTGC...AATGAAAAACAGCCCCGACATCAACCTGGAGAAAGACTGGAAGCTGGTCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR GCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGTTTTGGAAGAAAGGCTaGACCACAACCGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQFWKKG*TTTAKS
Trigger: GGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAA...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGCCTAGAGGGCCACAGTaGGCAGGCTCATTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMPRGPQ*AGSLED
Trigger: ATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGG...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATGCAAGCGGCCTATGAACTGAGGTaGGAACCGTATCGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: KTVNRDVGTPRVHVYMQAAYELR*EPYRRG
Trigger: ACCCCTCCGATACGGTTCCCACCTCAGTTCATAGGC...CGCTTGCATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCAGGTTGGAACACTATTaGAAGCCTTCCACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVRLEHY*KPSTLY
Trigger: GTACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCT...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CCA 90 bp TGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGGTGCAGGTTGGAACACTATTaGAAGCCTTCCACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: WKKGCTTTAKSSRCVYWCRLEHY*KPSTLY
Trigger: GTACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCT...GCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp ACGCTGTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCTGGTGGACAGAGGTTaGAACACTATTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TLCVLVPVGETGDAMLEVLVDRG*NTIGSL
Trigger: AAGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAG...AACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACACAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAAATGTGGGTAGGTCACTaGAGTTGTTTGGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKMWVGH*SCLVEL
Trigger: GAGCTCGACCAAACAACTCCAGTGACCTACCCACAT...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTGTTCACTTCTTCAGAATGTTaGGCAGTGTGGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: WVKLLEVVLRPTGSSMLFTSSEC*AVWCES
Trigger: AGACTCACACCACACTGCCCAACATTCTGAAGAAGT...GAACAACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CTGGAGGTTCCAGTTCACTTTCTTCAGTTCTTGCTTCTCCAGGGAGCTTTGCGAGGGGTGAGTGTGTTTTaGAAGAAAGGCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: LEVPVHFLQFLLLQGALRGVSVF*KKGCTT
Trigger: TGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCC...TCGCAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTGAACTGGAACCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp CAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGCAGGTCAAGGGGCCTTaGAAATATTCACAGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QWKKRQCSQDLGAQHIVKQVKGP*KYSQPS
Trigger: GCTCGGCTGTGAATATTTCCAAGGCCCCTTGACCTG...CTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCTTCAGAGAGTGAACTaGTTTAGAAGGCATATTCAC +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSLQRVN*FRRHIH
Trigger: GTGAATATGCCTTCTAAATCAGTTCACTCTCTGAAG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGCACCATCGTGGGGTATaGCTCTCTTTCCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMHHRGV*LSFQCG
Trigger: GCCACACTGGAAAGAGAGTCATACCCCACGATGGTG...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAACGGGAACAGCTTGATTaGGGAATGCATTCGTGTCAT +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKREQLD*GMHSCH
Trigger: ATGACACGAATGCATTCCTCAATCAAGCTGTTCCCG...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp AGTGTGACCAGCTTCCAGTCTTTCTCCAGGTTGATGTCGGGGCTGTTTTTCATTTCTCAATGGCTGGCTTaGTGGGGTACGTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: SVTSFQSFSRLMSGLFFISQWLA*WGTCSY
Trigger: GTAACTACACGTACCCCATCAAGCCAGCCATTGAGA...AATGAAAAACAGCCCCGACATCAACCTGGAGAAAGACTGGAAGCTGGTCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR TCA 90 bp GTTTTGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGAGTCTTTCTCCAGGTTaGTGTCGGGGCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VLEERLHHNRKVLTLCVLSLSPG*CRGCFS
Trigger: TGAAAAACAGCCCCGACATCAACCTGGAGAAAGACT...CAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp CTGGAGGTTCCAGTTCACTTTCTTCAGTTCTTGCTTCTCCAGGGAGCTTTGCGAAAACTGGAGATGCCATaGTGGAGGTTCCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: LEVPVHFLQFLLLQGALRKLEMP*WRFQFT
Trigger: AGTGAACTGGAACCTCCAGCATGGCATCTCCAGTTT...TCGCAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTGAACTGGAACCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR GCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAACACCAGGTTCACAAATaGCCGAGGAACCAGATCATT +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKHQVHK*PRNQII
Trigger: AATGATCTGGTTCCTCGGGCATTTGTGAACCTGGTG...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422425.6
CDS-3UTR GCA 90 bp GTTTTGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGCCAGGGTCTCTGTTTTaGTTCCAAGTGGTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: VLEERLHHNRKVLTLCVLPGSLF*FQVVQA
Trigger: AGCTTGAACCACTTGGAAGCAAAACAGAGACCCTGG...CAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR GCA 90 bp TGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTTGGCCTCTCGAAGTGTaGGATGGGTTTCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: CVLVMASRSVRWVSEVFCWPLEV*DGFQRF
Trigger: AAACCTCTGAAACCCATCGCACACTTCGAGAGGCCA...ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTCTTCCGTGTTCGGGATaGCCTTTCTCACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCLPCSG*PFSPFP
Trigger: AGGAAAGGGTGAGAAAGGGCATCCCGAACACGGAAG...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGTCCTCTCTGGGACTCTaGTCAGGTCTGGCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LFSQVNSELLATYFEAYRSSLGL*SGLARE
Trigger: TTCTCTGGCCAGACCTGAGCAGAGTCCCAGAGAGGA...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACGAGACCAAGTGCAGCTaGCAGAACCTCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FISESQEPSWSICFKVGHETKCS*QNLMLF
Trigger: AAAGAGCATGAGGTTCTGGCAGCTGCACTTGGTCTC...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGCTGCCCCACCAGGTaGACGTCGCGTATCTATCAC +
Preference number: 4 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHGCPTR*TSRIYH
Trigger: GTGATAGATACGCGACGTGCACCTGGTGGGGCAGCC...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTCCTTGGCCAGCCGGGTaGTCTCCTCTGAGCAATTAC +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCPWPAG*SPLSNY
Trigger: GTAATTGCTCAGAGGAGACCACCCGGCTGGCCAAGG...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGGGGGTTTCTGCAGTCTaGTCAGGTAGTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QWKKRQCSQDLGAQHIVKGVSAV*SGSCCF
Trigger: GAAACAGCAACTACCTGACCAGACTGCAGAAACCCC...CTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACCCTCCTGCCACAGCCTaGTTTAAGAAGGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: FISESQEPSWSICFKVGHPPATA*FKKALG
Trigger: TCCTAATGCCTTCTTAAACCAGGCTGTGGCAGGAGG...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTAACCAGCCTCCTGGCCTaGACAGGTAGATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLTSLLA*TGRSSA
Trigger: AGCTGAGGATCTACCTGTCCAGGCCAGGAGGCTGGT...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTGGCTCTGTCCCTGCATaGCAGCCAGGTCCCATGACC +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRGSVPA*QPGPMT
Trigger: GGTCATGGGACCTGGCTGCCATGCAGGGACAGAGCC...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTTCTGCATCAGAGTTTaGACTTGGCTCATAAGATCC +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVFCIRV*TWLIRS
Trigger: GGATCTTATGAGCCAAGTCCAAACTCTGATGCAGAA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTTGTTTTGCTTCCAAGTaGTTCAAGCATATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSCFASK*FKHIGP
Trigger: TGGACCAATATGCTTGAACCACTTGGAAGCAAAACA...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTCTGCTGGTCGGAGCTaGTGGACAGAGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWSAGRS*WTEVGT
Trigger: TGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGA...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTATCTGAGCTGCCAGCATaGCACATTTCCCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLSELPA*HISRLG
Trigger: GCCAAGGCGGGAAATGTGCCATGCTGGCAGCTCAGA...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACTTGGGCAGCCCTGCTaGAGGCAGGCCACAAAAAGT +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLLGQPC*RQATKS
Trigger: ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAG...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTATTGCCTTCTTTAGCTaGGACCAAGTGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCIAFFS*DQVQLP
Trigger: TGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAAT...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGCACCAGGTTTACAAATaGTCTGGGGACCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWHQVYK*SGDLLL
Trigger: CAGCAGGAGGTCCCCAGAGCATTTGTAAACCTGGTG...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAACCTGCTCACTGTACCTaGTGGAGGCCAGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQPAHCT*WRPGGC
Trigger: ACAGCCTCCTGGCCTCCAGCAGGTACAGTGAGCAGG...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAACTCATCTTTCTCTCCTaGTGGCTCCATCATCCTATT +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKLIFLS*WLHHPI
Trigger: AATAGGATGATGGAGCCAGCAGGAGAGAAAGATGAG...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTAAGGGGCTCTGTCCCTaGATGGCAGCCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRKGLCP*MAARSH
Trigger: ATGGGACCTGGCTGCCATGCAGGGACAGAGCCCCTT...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGCATGTTGTTCCAGAGTaGGATGGCCATCTCGGCATG +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMHVVPE*DGHLGM
Trigger: CATGCCGAGATGGCCATCGCACTCTGGAACAACATG...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATACCAGCCTCCTGGCCTaGACAGGTAGATCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHTSLLA*TGRSSA
Trigger: AGCTGAGGATCTACCTGTCCAGGCCAGGAGGCTGGT...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GTTTTGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGAGGTTGGAACACTATTaGAAGCCTTCCACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: VLEERLHHNRKVLTLCVLRLEHY*KPSTLY
Trigger: GTACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCT...CAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGCACTTTGATGTCTGCTaGTCGGAGCTGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWHFDVC*SELVDR
Trigger: TCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTG...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGGTCCCCTCCAAGATGTaGGTAGGTCACTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWVPSKM*VGHWSC
Trigger: ACAACTCCAGTGACCTACCCACATCTTGGAGGGGAC...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAGCACATTTCCCGCCTTaGCCCTGGTACAGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQAHFPP*PWYRLA
Trigger: GGCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGC...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAATGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQCSRVR*PSRHAR
Trigger: GCGGGCATGCCGAGATGGCCATCGCACTCTGGAACA...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGATTGTGTCTTGGTTATaGCCTCTCGAAGTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: VMASRSVRWVSEVFCADVIVSWL*PLEVCD
Trigger: ATCGCACACTTCGAGAGGCCATAACCAAGACACAAT...CACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAAAGCTTCCAGTCAAATTaGAAGTCAAGTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKSFQSN*KSSCRF
Trigger: GAACCTGCAACTTGACTTTCAATTTGACTGGAAGCT...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTGCTGTTTCTGTAGCTaGACAGATAGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWCCFCS*TDRGSP
Trigger: AGGAGAGCCCCTATCTGTTCAGCTACAGAAACAGCA...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACCTTTGTCAGGACATCTaGTTTCCGCTCCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: FISESQEPSWSICFKVGHLCQDI*FPLLLL
Trigger: TAAGAGAAGGAGCGGAAATCAGATGTCCTGACAAAG...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGAGTGAGACTTGCTGCTaGAGTGGAAACAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMSETCC*SGNSQE
Trigger: CTCCTGACTGTTTCCACTTCAGCAGCAAGTCTCACT...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp TGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTTTCCCAGGTAAATTCTaGGCTACTCGCCACTTACTT +
Preference number: 4 (lower is better)
Translates to: CVLVMASRSVRWVSEVFCFPGKF*ATRHLL
Trigger: AAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAA...ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp AAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATGCAAGCGAAACAGAGCAATGGCTaGATTTTCCCATCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KTVNRDVGTPRVHVYMQAKQSNG*IFPSLQ
Trigger: CTGCAGCGATGGGAAAATTCAGCCATTGCTCTGTTT...CGCTTGCATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCAGATTGCCAATGGCTaGCACAAATTTAATATCAGA +
Preference number: 4 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVQIANG*HKFNIR
Trigger: TCTGATATTAAATTTGTGGCAGCCATTGGCAATCTG...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAACCAGAGAGCACTGGCTaGTCGGGAGTGAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQPESTG*SGVRLA
Trigger: AGCAAGTCTCACTCCCGAGCAGCCAGTGCTCTCTGG...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTTGCACTGAGGTAGGGTaGAAGGCAGAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRCTEVG*KAEGAL
Trigger: CAGAGCCCCTTCTGCCTTGCACCCTACCTCAGTGCA...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTGCAGTTGTTCTGAGCTaGCAGCATGGCACATTTCCC +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCAVVLS*QHGTFP
Trigger: GGGAAATGTGCCATGCTGGCAGCTCAGAACAACTGC...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGGCTGCCAGAACCTCATaGTCTTTCCTGATTGTAATA +
Preference number: 4 (lower is better)
Translates to: VMASRSVRWVSEVFCADVAARTS*SFLIVI
Trigger: TATTACAATCAGGAAAGAGCATGAGGTTCTGGCAGC...CACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGACCTCAAGCTTGTCTTaGGGTTTCTGCAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWTSSLS*GFCSLV
Trigger: GACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGCCTCCTGCCACAGCCTaGTTTAAGAAGGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWPPATA*FKKALG
Trigger: TCCTAATGCCTTCTTAAACCAGGCTGTGGCAGGAGG...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTAGAAACGGCTGGACCTaGTTCGGACATGTGATATTG +
Preference number: 4 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCRNGWT*FGHVIL
Trigger: CAATATCACATGTCCGAACCAGGTCCAGCCGTTTCT...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAGGGAGCTGGATGTTCTaGAAGAAGGGCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQGSWMF*KKGCST
Trigger: GGTGCTGCAGCCCTTCTTCCAGAACATCCAGCTCCC...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTGGAGGTTCCAGTTCACTTTCTTCAGTTCTTGCTTCTCCAGGGAGCTTTGCGTGTTTTGCTTCCAAGTaGTTCAAGCATATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGGSSSLSSVLASPGSFACFASK*FKHIGP
Trigger: TGGACCAATATGCTTGAACCACTTGGAAGCAAAACA...CGCAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTGAACTGGAACCTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR CCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTAGTCTTGCGGCCCACTaGTTCCAGCATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCSLAAH*FQHVVP
Trigger: TGGAACAACATGCTGGAACCAGTGGGCCGCAAGACT...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp AAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATGCAAGCGAGCACATTGTTAAGCTaGCCAAAGCTGGAACCGTTC +
Preference number: 4 (lower is better)
Translates to: KTVNRDVGTPRVHVYMQASTLLS*PKLEPF
Trigger: GAACGGTTCCAGCTTTGGCCAGCTTAACAATGTGCT...CGCTTGCATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTACAGCTCCCTCAGGTTaGCGATCTCAAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRTAPSG*RSQAPS
Trigger: TGACGGTGCTTGAGATCGTCAACCTGAGGGAGCTGT...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGCGGGAACAGCTTGATTaGGGAATGCATTCGTGTCAT +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMREQLD*GMHSCH
Trigger: ATGACACGAATGCATTCCTCAATCAAGCTGTTCCCG...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATATGCAAGCGGGGAGGTaGAGATTCAGGGATTTGGTG +
Preference number: 4 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHMQAGR*RFRDLV
Trigger: CACCAAATCCCTGAATCTTCACCTCCCCGCTTGCAT...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATCCCCAGGAAGCAAACTaGCTCAGAAGAAAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHPQEAN*LRRKGR
Trigger: CCTCCCTTTTCTTCTGAGTCAGTTTGCTTCCTGGGG...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCTTTATTTTGATCCTTTaGATGGTCCCAAACAAGCGA +
Preference number: 4 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLFILIL*MVPNKR
Trigger: TCGCTTGTTTGGGACCATTCAAAGGATCAAAATAAA...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTATCCTATTCCAGAGATaGCAGGCCAGCGTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCILFQR*QASVVE
Trigger: TTCTACCACGCTGGCCTGGCATCTCTGGAATAGGAT...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GAATTGCTAATCTTTCAAGACATGGCTGATTGTGATTGTGTCTTGGTTATGGCCCACCAGGTTCACAAATaGCCGAGGAACCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: ELLIFQDMADCDCVLVMAHQVHK*PRNLSM
Trigger: CATGCTGAGGTTCCTCGGGCATTTGTGAACCTGGTG...GGCCATAACCAAGACACAATCACAATCAGCCATGTCTTGAAAGATTAGCAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATCACAACTTGGATGTCTaGAGGTCTCAGGGCATGCAC +
Preference number: 4 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHHNLDV*RSQGMH
Trigger: GTGCATGCCCTGAGACCTGCAGACATCCAAGTTGTG...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGCTTTTAGTAGAGGACTaGTGGTTCATATCTGAATCC +
Preference number: 4 (lower is better)
Translates to: VMASRSVRWVSEVFCADVLLVED*WFISES
Trigger: GGATTCAGATATGAACCAGCAGTCCTCTACTAAAAG...CACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGTTTATTTGGGTTGCATaGGAATGGAGAATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQFIWVA*EWRILQ
Trigger: CTGAAGAATTCTCCATTCCCATGCAACCCAAATAAA...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACAGACTTGCTGCTGAAGTaGAAACAGTCAGGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTDLLLK*KQSGAK
Trigger: CTTCGCTCCTGACTGTTTCCACTTCAGCAGCAAGTC...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAAAAGAAGGACGTATCTaGGAGCCCATCCGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQKEGRI*EPIRQD
Trigger: GTCCTGGCGGATGGGCTCCCAGATACGTCCTTCTTT...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTGTGGTTCAAGCATATTaGTCCAAAGGGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCVVQAY*SKGLWP
Trigger: TGGCCAGAGCCCTTTGGACCAATATGCTTGAACCAC...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCAAACCCAGGAATAAAATGTTTTGCTTCCAAGTaGTTCAAGCATATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAQEMEGECFTQANPGIKCFASK*FKHIGP
Trigger: TGGACCAATATGCTTGAACCACTTGGAAGCAAAACA...TTTTATTCCTGGGTTTGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAATCTGCTGGTCGGAGCTaGTGGACAGAGGTTGGAACA +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQSAGRS*WTEVGT
Trigger: TGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGA...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATTGCTGTTTCTGTAGCTaGACAGATAGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHCCFCS*TDRGSP
Trigger: AGGAGAGCCCCTATCTGTTCAGCTACAGAAACAGCA...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTCCATGGAACACACTTTaGGACACAGTAGTCTATGTA +
Preference number: 4 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCPWNTL*DTVVYV
Trigger: TACATAGACTACTGTGTCTCAAAGTGTGTTCCATGG...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTGTCTCTGGCCATAGCTaGCCTTCCAATGTACTCTTT +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCVSGHS*PSNVLF
Trigger: AAAGAGTACATTGGAAGGGCAGCTATGGCCAGAGAC...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACCAGGGTCTCTGTTTTaGTTCCAAGTGGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLPGSLF*FQVVQA
Trigger: TGCTTGAACCACTTGGAAGCAAAACAGAGACCCTGG...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp ACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATCCTAGAAGGAAAAGCTaGACAGCAGAGGTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: THKDSKQRRRNTTCTRIHPRRKS*TAEVEV
Trigger: CACCTCAACCTCTGCTGTGCAGCTTTTCCTTCTAGG...ATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp AAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATGCAAGCGGATTCAGGGATTTGGTaGTTTTCTGGTGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: KTVNRDVGTPRVHVYMQADSGIW*FSGAFP
Trigger: AGGAAATGCACCAGAAAAGCACCAAATCCCTGAATC...CGCTTGCATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAGGTTTACAAATGCTCTaGGGACCTCCTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQGLQML*GPPAAG
Trigger: ACCTGCAGCAGGAGGTCCCCAGAGCATTTGTAAACC...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGATCTTTCTCTCCTGCTaGCTCCATCATCCTATTCCA +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWIFLSC*LHHPIP
Trigger: TGGAATAGGATGATGGAGCCAGCAGGAGAGAAAGAT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTAAGAGGGACACTTCATTaGCCTCCCGTGTTTTACACT +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLRGTLH*PPVFYT
Trigger: AGTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCT...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGTCCTTCCGAGGTCTTTaGCATGTCCACGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LFSQVNSELLATYFEAYRSFRGL*HVHVFK
Trigger: TTTGAAAACGTGGACATGCCAAAGACCTCGGAAGGA...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAAGTTACACAAAACGCTaGCCTGCTGCACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQSYTKR*PAALGT
Trigger: AGTGCCCAGTGCAGCAGGCCAGCGTTTTGTGTAACT...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACTGGTGGACAGAGGTTaGAACACTATTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLLVDRG*NTIGSL
Trigger: AAGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAG...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CAA 72 bp GTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTaGGATTGGACTGAATGGCAACCAGCCAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VLDTKQLLNRYV*DWTEWQPASSK
Trigger: TTTGGAGCTGGCTGGTTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
3UTR CAA 72 bp CTAATCTTTCAAGACATGGCTGATTGTGATTGTGTCTaGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LIFQDMADCDCV*VMASRSVRWVS
Trigger: TGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACAATCACAATCAGCCATGTCTTGAAAGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp TCGGGATGCCCTTTCTCACCCTTTCCTCTTGTCGAATaGCTAATCTTTCAAGACATGGCTGATTGTGATTGT +
Preference number: 4 (lower is better)
Translates to: SGCPFSPFPLVE*LIFQDMADCDC
Trigger: ACAATCACAATCAGCCATGTCTTGAAAGATTAGCAATTCGACAAGAGGAAAGGGTGAGAAAGGGCATCCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTAGTGAGACTTGCTGCTaGAGTGGAAACAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRSETCC*SGNSQE
Trigger: CTCCTGACTGTTTCCACTTCAGCAGCAAGTCTCACT...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACAAGGAGGTAAGGGTTaGACTTCTTCAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLQGGKG*TSSECW
Trigger: CCAACATTCTGAAGAAGTTCAACCCTTACCTCCTTG...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAATCCCAAAATGACATGTaGAGGTTGCTCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQSQNDM*RLLSPK
Trigger: CTTGGGGGAGAGCAACCTTCACATGTCATTTTGGGA...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACTCATCTTTCTCTCCTaGTGGCTCCATCATCCTATT +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLLIFLS*WLHHPI
Trigger: AATAGGATGATGGAGCCAGCAGGAGAGAAAGATGAG...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp TGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTTTTTCAAAGAACGGCTaGACAACCACAGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: CVLVMASRSVRWVSEVFCFSKNG*TTTVKS
Trigger: AGATTTTACTGTGGTTGTGCAGCCGTTCTTTGAAAA...ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGAGCTTGATTGAGGAATaGATTCGTGTCATTGGCATC +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWSLIEE*IRVIGI
Trigger: GATGCCAATGACACGAATGCATTCCTCAATCAAGCT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTTTAGCTGAGACCAAGTaGAGCTGCCAGAACCTCATG +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRLAETK*SCQNLM
Trigger: CATGAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAA...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGCAGATGTGGAATTTTCCCATCGCTaGAGAAAGAAACTTTTAGTA +
Preference number: 4 (lower is better)
Translates to: VMASRSVRWVSEVFCADVEFSHR*RKKLLV
Trigger: TACTAAAAGTTTCTTTCTGCAGCGATGGGAAAATTC...CACATCTGCACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTTGGAAGAAAAGGCAATaGTCTCAAGACCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRWKKRQ*SQDLGA
Trigger: GGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCA...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAACCTCCTGCCACAGCCTaGTTTAAGAAGGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQPPATA*FKKALG
Trigger: TCCTAATGCCTTCTTAAACCAGGCTGTGGCAGGAGG...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTAAGGTTGGAACACTATTaGAAGCCTTCCACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: HLPTDALVVTHHHVASWLRLEHY*KPSTLY
Trigger: GTACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCT...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp ACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATTGGTGGGTCTTCTCCTaGAACTTCTTGTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: THKDSKQRRRNTTCTRIHWWVFS*NFLLNS
Trigger: CGAATTCAACAAGAAGTTTCAGGAGAAGACCCACCA...ATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGATGCTAATACACACATaGATTCCCCAAAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LFSQVNSELLATYFEAYRMLIHT*IPQRKV
Trigger: AACCTTCCTTTGGGGAATTCATGTGTGTATTAGCAT...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAAAGATCCTCAGCCTTTaGTCCGGGAACAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQKILSL*SGNSLI
Trigger: AATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTT...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGACAGATTCGAATCTGTaGAGTAGTCACATAAATCGC +
Preference number: 4 (lower is better)
Translates to: THLPTDALVVTHHHVASWTDSNL*SSHINR
Trigger: GCGATTTATGTGACTACTGCACAGATTCGAATCTGT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAACTCTCTTTCCAGTGTaGCACACAGGCATTGGAACA +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQTLFPV*HTGIGT
Trigger: TGTTCCAATGCCTGTGTGCCACACTGGAAAGAGAGT...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTCATCACGTGGCTTCTTaGTTATTGAAGGAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCHHVAS*LLKEFD
Trigger: GTCAAACTCCTTCAATAACCAAGAAGCCACGTGATG...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR TCA 90 bp ACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATTTCCAATGTTGTCTGTaGAGTTCTGGGGAGAATAGT +
Preference number: 4 (lower is better)
Translates to: THKDSKQRRRNTTCTRIHFQCCL*SSGENS
Trigger: ACTATTCTCCCCAGAACTTCACAGACAACATTGGAA...ATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAATGGTGGGTCTTCTCCTaGAACTTCTTGTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQWWVFS*NFLLNS
Trigger: CGAATTCAACAAGAAGTTTCAGGAGAAGACCCACCA...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR GCA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTTTTCAAAGAACGGCTaGACAACCACAGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: APQCFALSWIQNSCLIGMFSKNG*TTTVKS
Trigger: AGATTTTACTGTGGTTGTGCAGCCGTTCTTTGAAAA...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTTCTCGAAGTGTGCGATaGGTTTCAGAGGTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRSRSVR*VSEVFC
Trigger: ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGA...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GAATTGCTAATCTTTCAAGACATGGCTGATTGTGATTGTGTCTTGGTTATGGCCTTAGTAGAGGACTGCTaGTTCATATCTGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: ELLIFQDMADCDCVLVMALVEDC*FISESQ
Trigger: CTGGGATTCAGATATGAACCAGCAGTCCTCTACTAA...GGCCATAACCAAGACACAATCACAATCAGCCATGTCTTGAAAGATTAGCAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTTTGTTTTCAAACTTATaGCGAGTCGTCTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRLFSNL*RVVFWP
Trigger: TGGCCAGAAGACGACTCGTCATAAGTTTGAAAACAA...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR TCA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTTTTACTTTCTCTGTATaGCAGTCCCCGATACTGTGT +
Preference number: 4 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRFTFSV*QSPILC
Trigger: ACACAGTATCGGGGACTGTCATACAGAGAAAGTAAA...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR GCA 90 bp GAATTGCTAATCTTTCAAGACATGGCTGATTGTGATTGTGTCTTGGTTATGGCCGCAATGTGGTTCGTCTaGTTGATTTTTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ELLIFQDMADCDCVLVMAAMWFV*LIFVSH
Trigger: ATGGGAAACAAAAATCAAGCAGACGAACCACATTGC...GGCCATAACCAAGACACAATCACAATCAGCCATGTCTTGAAAGATTAGCAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CCA 90 bp GAATTGCTAATCTTTCAAGACATGGCTGATTGTGATTGTGTCTTGGTTATGGCCCTATCACCTGCAATGTaGTTCGTCTGCTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: ELLIFQDMADCDCVLVMALSPAM*FVCLIF
Trigger: AAAAATCAAGCAGACGAACCACATTGCAGGTGATAG...GGCCATAACCAAGACACAATCACAATCAGCCATGTCTTGAAAGATTAGCAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
3UTR CAA 72 bp ATGGAACAATTTGCGGCGTTTAGTACATTCACGGTGTaGCGCAAGCATCACTTCTATTTTCAAAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: MEQFAAFSTFTV*RKHHFYFQRFS
Trigger: GGAAAATCTTTGAAAATAGAAGTGATGCTTGCGCAACACCGTGAATGTACTAAACGCCGCAAATTGTTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR TCA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAACTTCAGAGAGTGAACTaGTTTAGAAGGCATATTCAC +
Preference number: 4 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQLQRVN*FRRHIH
Trigger: GTGAATATGCCTTCTAAATCAGTTCACTCTCTGAAG...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCAGTTTGGGCTCTGGTaGGTCGTGGCTTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALQFGLW*VVAWAA
Trigger: GGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTG...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCACTGCATCACCACCTaGGCCAGCCGGGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGHCITT*ASRVVS
Trigger: GGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGTG...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGTGGACCCGGCCCCATaGCCTGCCGTGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRVDPAP*PAVRES
Trigger: TGACTCTCTCACGGCAGGCAATGGGGCCGGGTCCAC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTCCCGATGATGCCCACCACAAGGCCGACTCCCGCTGCCACTGGGACAGCCCATCAGGAGAGGGGCACTaGAGTTTGGCTCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: CPDDAHHKADSRCHWDSPSGEGH*SLARLW
Trigger: CCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGA...TGGGCTGTCCCAGTGGCAGCGGGAGTCGGCCTTGTGGTGGGCATCATCGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS GCA 90 bp GAAGCAGCAGCAGCTCCAGGAGGAAAATGCCTGGCCGCAGCCCCATaGCAGAATGCTCCAGGTGACTCGGGCCTCTGGAAGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EAAAAPGGKCLAAAP*QNAPGDSGLWKSCS
Trigger: GGAGCAGCTCTTCCAGAGGCCCGAGTCACCTGGAGCATTCTGGCATGGGGCTGCGGCCAGGCATTTTCCTCCTGGAGCTGCTGCTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGATCTGAGGGGTCCCTaGCCCCAGAAGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRDLRGP*PQKQQQ
Trigger: CTGCTGCTGCTTCTGGGGCAAGGGACCCCTCAGATC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGATCTGAGGGGTCCCTaGCCCCAGAAGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGDLRGP*PQKQQQ
Trigger: CTGCTGCTGCTTCTGGGGCAAGGGACCCCTCAGATC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCACTGCATCACCACCTaGGCCAGCCGGGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPHCITT*ASRVVS
Trigger: GGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: PSRAPRGLLQPGLGAIGCRAATT*MSAGRS
Trigger: GCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCT...ACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp CTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: LGGFFSLVWEQSAVPQGVRAATT*MSAGRS
Trigger: GCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCT...TACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGGCACATTTCCCGCCTaGGCCCTGGTACAGGCTAGC +
Preference number: 5 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKGTFPA*ALVQAS
Trigger: GCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGCC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGCACATTTCCCGCCTaGGCCCTGGTACAGGCTAGC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGTFPA*ALVQAS
Trigger: GCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCAGTGCGCAGGCTCATaGGAGGATCTTCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRQCAGS*EDLPSG
Trigger: GCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCCCTTCAGGGAAGGGTaGAATTCCCGGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRPFREG*NSRRMF
Trigger: GAACATCCTCCGGGAATTCAACCCTTCCCTGAAGGG...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCAGAGCAGCCACAACTaGGATGTCTGCAGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALQSSHN*DVCRSQ
Trigger: CTGAGACCTGCAGACATCCAAGTTGTGGCTGCTCTG...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGAGGAAGTCCACGAGGTaGACCAGGACTCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: LPMAPGIEACPGGREWLGRKSTR*TRTLGT
Trigger: GGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCCT...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGAGGAAGTCCACGAGGTaGACCAGGACTCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: PGLPMAPGIEACPGGREWRKSTR*TRTLGT
Trigger: GGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCCT...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRAATT*MSAGRS
Trigger: GCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGGCACATTTCCCGCCTaGGCCCTGGTACAGGCTAGC +
Preference number: 5 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSGTFPA*ALVQAS
Trigger: GCTAGCCTGTACCAGGGCCAAGGCGGGAAATGTGCC...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGAGGGGCACTTGAGTTaGGCTCGGCTGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGEGHLS*ARLWVK
Trigger: CTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTCAGGAGAGGGGCACTaGAGTTTGGCTCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSGEGH*SLARLW
Trigger: CCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATCAGTGCGCAGGCTCATaGGAGGATCTTCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHQCAGS*EDLPSG
Trigger: GCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACTG...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCAGTGCGCAGGCTCATaGGAGGATCTTCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPQCAGS*EDLPSG
Trigger: GCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCCAGTGCGCAGGCTCATaGGAGGATCTTCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAQCAGS*EDLPSG
Trigger: GCCGGAGGGAAGATCCTCCAATGAGCCTGCGCACTG...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTCAACCTAGGTCCTCGTaGTGGGTGGTACAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LSWLRHSLARCPLVASFVQPRSS*WVVQAE
Trigger: CTCGGCCTGTACCACCCACAACGAGGACCTAGGTTG...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCACGCAAGCCCATTCTGTaGAGCAGAGGGGCACAGGTA +
Preference number: 5 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVARKPIL*SRGAQV
Trigger: TACCTGTGCCCCTCTGCTCAACAGAATGGGCTTGCG...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAGGAAGTCCACGAGGTaGACCAGGACTCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRKSTR*TRTLGT
Trigger: GGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCCT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CAA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCAGGAAGTCCACGAGGTaGACCAGGACTCTGGGCACC +
Preference number: 5 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSRKSTR*TRTLGT
Trigger: GGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCCT...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTGCTGCACTGGGCACTaGTCTGGGTTTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRCCTGH*SGFPRN
Trigger: GTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGGCTGGTGGACAGAGGTaGGAACACTATTGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRAGGQR*EHYWKP
Trigger: AGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAGC...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGGTCACTGGAGTTGTTaGGTCGAGCTCCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGGHWSC*VELPLL
Trigger: CAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTTGTTGGAGGTAGTCTaGCGGCCCACTGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLLEVV*RPTGSS
Trigger: GCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTCTGTGGGTGAAGTTGTaGGAGGTAGTCTTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSLWVKL*EVVLRP
Trigger: GGGCCGCAAGACTACCTCCAACAACTTCACCCACAG...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTGTGGGTGAAGTTGTaGGAGGTAGTCTTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLWVKL*EVVLRP
Trigger: GGGCCGCAAGACTACCTCCAACAACTTCACCCACAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCTGTGGGTGAAGTTGTaGGAGGTAGTCTTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGLWVKL*EVVLRP
Trigger: GGGCCGCAAGACTACCTCCAACAACTTCACCCACAG...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCTGTGGGTGAAGTTGTaGGAGGTAGTCTTGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LPMAPGIEACPGGREWLGLWVKL*EVVLRP
Trigger: GGGCCGCAAGACTACCTCCAACAACTTCACCCACAG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCGGCTGTGGGTGAAGTaGTTGGAGGTAGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRRLWVK*LEVVLR
Trigger: CCGCAAGACTACCTCCAACAACTTCACCCACAGCCG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGAGGGGCACTTGAGTTaGGCTCGGCTGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPEGHLS*ARLWVK
Trigger: CTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCAGGAGAGGGGCACTaGAGTTTGGCTCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSGEGH*SLARLW
Trigger: CCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTCAGGAGAGGGGCACTaGAGTTTGGCTCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHSGEGH*SLARLW
Trigger: CCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGA...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LPMAPGIEACPGGREWLGLWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS GCA 90 bp CTGGCCTGCTGCACTGGGCACTTGTCTGGGTTTCCCAGGAACACCTaGCGCATGATAGTGGGGTTCAGGAAGTCCACGAGGTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: LACCTGHLSGFPRNT*RMIVGFRKSTRLTR
Trigger: CCTGGTCAACCTCGTGGACTTCCTGAACCCCACTATCATGCGGCAGGTGTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000479065.5
CDS-3UTR CAA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCCTTTCAGTCCAGTCTaGCTTCTCCAGATCGCCCGT +
Preference number: 5 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGPFSPV*LLQIAR
Trigger: ACGGGCGATCTGGAGAAGCAAGACTGGACTGAAAGG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGGGCTCCAATTACGTaGATGTCAGCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRRAPIT*MSAGFS
Trigger: GCTGAAGCCGGCTGACATCAACGTAATTGGAGCCCT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCCCTTCAGGGAAGGGTaGAATTCCCGGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGPFREG*NSRRMF
Trigger: GAACATCCTCCGGGAATTCAACCCTTCCCTGAAGGG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTACAGCTCCCTCAGGTaGACGATCTCAAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRYSSLR*TISSTV
Trigger: GACGGTGCTTGAGATCGTCAACCTGAGGGAGCTGTA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTAATGCATTCGTGTCATaGGCATCACCCGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSNAFVS*ASPVPT
Trigger: CGTGGGCACGGGTGATGCCAATGACACGAATGCATT...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAATGCATTCGTGTCATaGGCATCACCCGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRNAFVS*ASPVPT
Trigger: CGTGGGCACGGGTGATGCCAATGACACGAATGCATT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGTGCTCCGGGAACAGCTaGATTGAGGAATGCATTCGT +
Preference number: 5 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALCSGNS*IEECIR
Trigger: ACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCA...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGCTGCACTGGGCACTaGTCTGGGTTTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHCCTGH*SGFPRN
Trigger: GTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCA...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGCTGCACTGGGCACTaGTCTGGGTTTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPCCTGH*SGFPRN
Trigger: GTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKRAATT*MSAGRS
Trigger: GCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCT...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGTCACTGGAGTTGTTaGGTCGAGCTCCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGHWSC*VELPLL
Trigger: CAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGRSLE*FGRAPT
Trigger: AGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGGRSLE*FGRAPT
Trigger: AGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGGRSLE*FGRAPT
Trigger: AGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CCACCCCCGGGCCTAGAGGGCCACAGTGCGCAGGCTCATTGGAGGATCTTCCCTGATGTCCAGGGCCTGTaGGATGTGCTGAACATATTC +
Preference number: 5 (lower is better)
Translates to: PPPGLEGHSAQAHWRIFPDVQGL*DVLNIF
Trigger: GAATATGTTCAGCACATCCAACAGGCCCTGGACATC...AGGGAAGATCCTCCAATGAGCCTGCGCACTGTGGCCCTCTAGGCCCGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAACTGGTTCCAGCATGTaGTTCCAGAGTGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKTGSSM*FQSAMA
Trigger: GGCCATCGCACTCTGGAACAACATGCTGGAACCAGT...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGACTGGTTCCAGCATGTaGTTCCAGAGTGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRTGSSM*FQSAMA
Trigger: GGCCATCGCACTCTGGAACAACATGCTGGAACCAGT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAACTGGTTCCAGCATGTaGTTCCAGAGTGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LGGFFSLVWEQSAVPQGVTGSSM*FQSAMA
Trigger: GGCCATCGCACTCTGGAACAACATGCTGGAACCAGT...TACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTTGTTGGAGGTAGTCTaGCGGCCCACTGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPLLEVV*RPTGSS
Trigger: GCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCTTGTTGGAGGTAGTCTaGCGGCCCACTGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRAPRGLLQPGLGAIGCSLLEVV*RPTGSS
Trigger: GCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAA...GGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTGTGGGTGAAGTaGTTGGAGGTAGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRLWVK*LEVVLR
Trigger: CCGCAAGACTACCTCCAACAACTTCACCCACAGCCG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CTTGCGGCCCACTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LAAHWFQHVVPECDGHLGLWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...GCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAGTGGGCCGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS CCA 90 bp GGAGGCTGTTCCAGGCTTCCTGATAAGACCACTGCATCACCACCTTaGCCAGCCGGGTGGTCTCCTCTGAGCAATTACAGGGCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: GGCSRLPDKTTASPP*PAGWSPLSNYRALV
Trigger: CACCAGAGCCCTGTAATTGCTCAGAGGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGTGGTCTTATCAGGAAGCCTGGAACAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGATCTGAGGGGTCCCTaGCCCCAGAAGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSDLRGP*PQKQQQ
Trigger: CTGCTGCTGCTTCTGGGGCAAGGGACCCCTCAGATC...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGGGAGGAATTTCCAGATaGCCAATGGCTGCCACAAAT +
Preference number: 5 (lower is better)
Translates to: VAGSLGSGWSWLGQPCWRGGISR*PMAATN
Trigger: ATTTGTGGCAGCCATTGGCAATCTGGAAATTCCTCC...CCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCTTTCAGTCCAGTCTaGCTTCTCCAGATCGCCCGT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPFSPV*LLQIAR
Trigger: ACGGGCGATCTGGAGAAGCAAGACTGGACTGAAAGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCGAGAGGGACACTTCATaGGCCTCCCGTGTTTTACAC +
Preference number: 5 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGERDTS*ASRVLH
Trigger: GTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCTC...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCCTTCAGGGAAGGGTaGAATTCCCGGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPFREG*NSRRMF
Trigger: GAACATCCTCCGGGAATTCAACCCTTCCCTGAAGGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGAGCGAAGAAAGAGTaGTCAGGCAATCCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: GSGWSWLGQPCWRQATKSGAKKE*SGNPSE
Trigger: CTCGGAAGGATTGCCTGACAACTCTTTCTTCGCTCC...ACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGAGCGAAGAAAGAGTaGTCAGGCAATCCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGAKKE*SGNPSE
Trigger: CTCGGAAGGATTGCCTGACAACTCTTTCTTCGCTCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTACAGGCTCCAGCATATaGTTCCAGAGAGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LSWLRHSLARCPLVASFVTGSSI*FQRALA
Trigger: AGCCAGTGCTCTCTGGAACAATATGCTGGAGCCTGT...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCAGAGCAGCCACAACTaGGATGTCTGCAGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPQSSHN*DVCRSQ
Trigger: CTGAGACCTGCAGACATCCAAGTTGTGGCTGCTCTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTCAGAGCAGCCACAACTaGGATGTCTGCAGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: PQAAPPGARRVSITCNVVQSSHN*DVCRSQ
Trigger: CTGAGACCTGCAGACATCCAAGTTGTGGCTGCTCTG...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTTGGAGCCAATTCCATaGCCAGCGGTCAGAGAATCC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLEPIP*PAVRES
Trigger: GGATTCTCTGACCGCTGGCAATGGAATTGGCTCCAA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CCCAGGCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATGGGAGGTCGTCTGGTTaGGAGCCAATTCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: PRPQEVVTVPWASYGTRHGRSSG*EPIPLP
Trigger: TGGCAATGGAATTGGCTCCAAACCAGACGACCTCCC...ATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGGGAGGTCGTCTGGTTaGGAGCCAATTCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPGRSSG*EPIPLP
Trigger: TGGCAATGGAATTGGCTCCAAACCAGACGACCTCCC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGAGTGGTTCAAGCATATaGGTCCAAAGGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRSGSSI*VQRALA
Trigger: GGCCAGAGCCCTTTGGACCAATATGCTTGAACCACT...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAAGTGGTTCAAGCATATaGGTCCAAAGGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: LGGFFSLVWEQSAVPQGVSGSSI*VQRALA
Trigger: GGCCAGAGCCCTTTGGACCAATATGCTTGAACCACT...TACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGCTGGTGGACAGAGGTaGGAACACTATTGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRAGGQR*EHYWKP
Trigger: AGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAGC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: CWRQATKSGSSHTWAAQEGRSLE*FGRAPT
Trigger: AGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCACTTTCTTCAGTTCTaGCTTCTCCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALHFLQF*LLQGAL
Trigger: CAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTG...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGTGGGGTGAGTGTGTTTaGGAAGAAAGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGWGECV*EERLHH
Trigger: GTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCA...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp TTCTTCAGCCTGGTCTGGGAGCAATCGGCTGTTCCGCAGGGTGTAGAGGTAAGGGAGGGGCACTTGAGTTaGGCTCGGCTGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FFSLVWEQSAVPQGVEVREGHLS*ARLWVK
Trigger: CTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTC...CCTTACCTCTACACCCTGCGGAACAGCCGATTGCTCCCAGACCAGGCTGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp GCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCCTCAGTGCTTCGCATaGTCCTGGATACAAAACAGT +
Preference number: 5 (lower is better)
Translates to: ARGGRQFGLWLVVAWAALPQCFA*SWIQNS
Trigger: ACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG...CAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGAGAGGGACACTTCATaGGCCTCCCGTGTTTTACAC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPERDTS*ASRVLH
Trigger: GTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCTC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGTATCGGAGGGGTCTTaGTCAGGACATCTGATTTCC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRVSEGS*SGHLIS
Trigger: GGAAATCAGATGTCCTGACAAAGACCCCTCCGATAC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGGTATCGGAGGGGTCTTaGTCAGGACATCTGATTTCC +
Preference number: 5 (lower is better)
Translates to: PGLPMAPGIEACPGGREWVSEGS*SGHLIS
Trigger: GGAAATCAGATGTCCTGACAAAGACCCCTCCGATAC...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGGTGGACCCGGCCCCATaGCCTGCCGTGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQVDPAP*PAVRES
Trigger: TGACTCTCTCACGGCAGGCAATGGGGCCGGGTCCAC...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCATACAGCTCCCTCAGGTaGACGATCTCAAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: SSHTWAAQEMEGECFTQAYSSLR*TISSTV
Trigger: GACGGTGCTTGAGATCGTCAACCTGAGGGAGCTGTA...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCCACTCTCAATCAGTaGGTGGGTCTTCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: PGLPMAPGIEACPGGREWPTLNQ*VGLLLK
Trigger: TTTCAGGAGAAGACCCACCAACTGATTGAGAGTGGG...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCACAGGCTCCAGCATATaGTTCCAGAGAGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPTGSSI*FQRALA
Trigger: AGCCAGTGCTCTCTGGAACAATATGCTGGAGCCTGT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGTTGGAGCCAATTCCATaGCCAGCGGTCAGAGAATCC +
Preference number: 5 (lower is better)
Translates to: CWRQATKSGSSHTWAAQELEPIP*PAVRES
Trigger: GGATTCTCTGACCGCTGGCAATGGAATTGGCTCCAA...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGGAGGTCGTCTGGTTaGGAGCCAATTCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDGRSSG*EPIPLP
Trigger: TGGCAATGGAATTGGCTCCAAACCAGACGACCTCCC...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCAATGCATTCGTGTCATaGGCATCACCCGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: DLRICSWWQAVWALVGRGNAFVS*ASPVPT
Trigger: CGTGGGCACGGGTGATGCCAATGACACGAATGCATT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTGCTGCACTGGGCACTaGTCTGGGTTTCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKCCTGH*SGFPRN
Trigger: GTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCAGTGGTTCAAGCATATaGGTCCAAAGGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: DCPLGFLWHQALKHVLVASGSSI*VQRALA
Trigger: GGCCAGAGCCCTTTGGACCAATATGCTTGAACCACT...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCTCCAGGGTCTCTGTTTaGCTTCCAAGTGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: SGWSWLGQPCWRQATKSGSRVSV*LPSGSS
Trigger: GCTTGAACCACTTGGAAGCAAAACAGAGACCCTGGA...GCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTCCAGGGTCTCTGTTTaGCTTCCAAGTGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSRVSV*LPSGSS
Trigger: GCTTGAACCACTTGGAAGCAAAACAGAGACCCTGGA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGCTGGTGGACAGAGGTaGGAACACTATTGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPAGGQR*EHYWKP
Trigger: AGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAGC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCAGTCTTTCTCCAGGTaGATGTCGGGGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGQSFSR*MSGLFF
Trigger: GAAAAACAGCCCCGACATCAACCTGGAGAAAGACTG...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCAGTCTTTCTCCAGGTaGATGTCGGGGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRQSFSR*MSGLFF
Trigger: GAAAAACAGCCCCGACATCAACCTGGAGAAAGACTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GACAGCCCAGTAGAGCACCTCGGGGGCTTCTTCAGCCTGGTCTGGGAGCAATCGCAGTCTTTCTCCAGGTaGATGTCGGGGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: DSPVEHLGGFFSLVWEQSQSFSR*MSGLFF
Trigger: GAAAAACAGCCCCGACATCAACCTGGAGAAAGACTG...CGATTGCTCCCAGACCAGGCTGAAGAAGCCCCCGAGGTGCTCTACTGGGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGATGTCCAGGGCCTGTaGGATGTGCTGAACATATTC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRDVQGL*DVLNIF
Trigger: GAATATGTTCAGCACATCCAACAGGCCCTGGACATC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTCACGCTGTGTGTATaGGTGCCAGTAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLTLCV*VPVGET
Trigger: AGTTTCTCCTACTGGCACCAATACACACAGCGTGAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGGGGTGAGTGTGTTTaGGAAGAAAGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPWGECV*EERLHH
Trigger: GTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp CTTGCGGCCCACTGGTTCCAGCATGTTGTTCCAGAGTGCGATGGCCATCTCGGCTGGGGTGAGTGTGTTTaGGAAGAAAGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: LAAHWFQHVVPECDGHLGWGECV*EERLHH
Trigger: GTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCA...GCCGAGATGGCCATCGCACTCTGGAACAACATGCTGGAACCAGTGGGCCGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCTGGGGTGAGTGTGTTTaGGAAGAAAGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAWGECV*EERLHH
Trigger: GTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCA...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKLWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS TCA 90 bp GCTCACTACTCACAGTCAGAGAGTCACCCAGGGCGGCCACCACTTTaGTGTCTGCTGGTCGGAGCTGGTGGACAGAGGTTGGAACACTAT +
Preference number: 5 (lower is better)
Translates to: AHYSQSESHPGRPPL*CLLVGAGGQRLEHY
Trigger: ATAGTGTTCCAACCTCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCTGGGTGACTCTCTGACTGTGAGTAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479065.5
CDS GCA 90 bp TGGTGCAGGGCTGAGCCAAGTGCCGTGATACTGACGAGAGACCTCTaGAACCTCAGAGAGGTCCACCAGGTTTACAAATGCTCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: WCRAEPSAVILTRDL*NLREVHQVYKCSGD
Trigger: GTCCCCAGAGCATTTGTAAACCTGGTGGACCTCTCTGAGGTTGCAGAGGTCTCTCGTCAGTATCACGGCACTTGGCTCAGCCCTGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS CCA 90 bp TGCTTCCAAGTGGTTCAAGCTGGCCTGCTGCACTGGGCACTTGTCTaGGTTTCCCAGGAACACCTGCCGCATGATAGTGGGGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: CFQVVQAGLLHWALV*VSQEHLPHDSGVQE
Trigger: TTCCTGAACCCCACTATCATGCGGCAGGTGTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGCTTGAACCACTTGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000479065.5
CDS-3UTR CAA 90 bp CTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAAGTGGCAGGAGGAATTTCCAGATaGCCAATGGCTGCCACAAAT +
Preference number: 5 (lower is better)
Translates to: LVGRGLGSPAGGRPQKVAGGISR*PMAATN
Trigger: ATTTGTGGCAGCCATTGGCAATCTGGAAATTCCTCC...TGCCACTTTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGGAGGAATTTCCAGATaGCCAATGGCTGCCACAAAT +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRGGISR*PMAATN
Trigger: ATTTGTGGCAGCCATTGGCAATCTGGAAATTCCTCC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTACCTCAAGCTTGTCTaGGGGTTTCTGCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPYLKLV*GFLQSG
Trigger: ACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGTA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTCTCTTACCTCAAGCTaGTCTTGGGGTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGSLTSS*SWGFCS
Trigger: ACTGCAGAAACCCCAAGACAAGCTTGAGGTAAGAGA...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCCCACTCTCAATCAGTaGGTGGGTCTTCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPPTLNQ*VGLLLK
Trigger: TTTCAGGAGAAGACCCACCAACTGATTGAGAGTGGG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCGGAGCGAAGAAAGAGTaGTCAGGCAATCCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: DLRICSWWQAVWALVGRGGAKKE*SGNPSE
Trigger: CTCGGAAGGATTGCCTGACAACTCTTTCTTCGCTCC...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCACAGGCTCCAGCATATaGTTCCAGAGAGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: DLRICSWWQAVWALVGRGTGSSI*FQRALA
Trigger: AGCCAGTGCTCTCTGGAACAATATGCTGGAGCCTGT...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTGCTCCGGGAACAGCTaGATTGAGGAATGCATTCGT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPCSGNS*IEECIR
Trigger: ACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCCAGGGTCTCTGTTTaGCTTCCAAGTGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSRVSV*LPSGSS
Trigger: GCTTGAACCACTTGGAAGCAAAACAGAGACCCTGGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGGAGGTTGGAACACTATaGGAAGCCTTCCACTCTGTA +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPREVGTL*EAFHSV
Trigger: TACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCTC...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGAGGTTGGAACACTATaGGAAGCCTTCCACTCTGTA +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGEVGTL*EAFHSV
Trigger: TACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCTC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGATGTCCAGGGCCTGTaGGATGTGCTGAACATATTC +
Preference number: 5 (lower is better)
Translates to: DCPLGFLWHQALKHVLVADVQGL*DVLNIF
Trigger: GAATATGTTCAGCACATCCAACAGGCCCTGGACATC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp TTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGCCACTTTCTTCAGTTCTaGCTTCTCCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: FLWHQALKHVLVAGSGWGHFLQF*LLQGAL
Trigger: CAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTG...GCCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCACTTTCTTCAGTTCTaGCTTCTCCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRHFLQF*LLQGAL
Trigger: CAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGCTCACGCTGTGTGTATaGGTGCCAGTAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: CWRQATKSGSSHTWAAQELTLCV*VPVGET
Trigger: AGTTTCTCCTACTGGCACCAATACACACAGCGTGAG...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGACTGGTTCCAGCATGTaGTTCCAGAGTGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKTGSSM*FQSAMA
Trigger: GGCCATCGCACTCTGGAACAACATGCTGGAACCAGT...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCGGCTGTGGGTGAAGTaGTTGGAGGTAGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSRLWVK*LEVVLR
Trigger: CCGCAAGACTACCTCCAACAACTTCACCCACAGCCG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTGTGGGTGAAGTTGTTGGAGGTAGTCTTGCGGCCCACTGGTTCCAGCATGTTCGGCTGTGGGTGAAGTaGTTGGAGGTAGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: AVGEVVGGSLAAHWFQHVRLWVK*LEVVLR
Trigger: CCGCAAGACTACCTCCAACAACTTCACCCACAGCCG...AACATGCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAACTTCACCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp TGGAAGCCTTCCACTCTGTACACAGGAAGTCACTGCCCCAGTTCTCAATGGCTGGAGGGGCACTTGAGTTaGGCTCGGCTGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: WKPSTLYTGSHCPSSQWLEGHLS*ARLWVK
Trigger: CTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTC...CAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGTACAGAGTGGAAGGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CAA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSLWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGCAGTTTGGGCTCTGGTaGGTCGTGGCTTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQQFGLW*VVAWAA
Trigger: GGCTGCCCAAGCCACGACCAACCAGAGCCCAAACTG...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS GCA 90 bp CTTCTGGCCAACAGGCTCCAGCATATTGTTCCAGAGAGCACTGGCTaGTCGGGAGTGAGACTTGCTGCTGAAGTGGAAACAGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LLANRLQHIVPESTG*SGVRLAAEVETVRS
Trigger: GCTCCTGACTGTTTCCACTTCAGCAGCAAGTCTCACTCCCGAGCAGCCAGTGCTCTCTGGAACAATATGCTGGAGCCTGTTGGCCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000481449.1
CDS CCA 90 bp CTGGCCTGGACAGGTAGATCCTCAGCTCGGCCTCCTGCCACAGCCTaGTTTAAGAAGGCATTAGGACTGGTTTCTTTCCCAGTGCCAACA +
Preference number: 5 (lower is better)
Translates to: LAWTGRSSARPPATA*FKKALGLVSFPVPT
Trigger: TGTTGGCACTGGGAAAGAAACCAGTCCTAATGCCTTCTTAAACCAGGCTGTGGCAGGAGGCCGAGCTGAGGATCTACCTGTCCAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000485642.1
CDS CCA 90 bp AACGCAGTTACACAAAACGCTGGCCTGCTGCACTGGGCACTTGTCTaGGTTTCCCAGGAACACCTGCCGCATGATAGTGGGGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: NAVTQNAGLLHWALV*VSQEHLPHDSGVQE
Trigger: TTCCTGAACCCCACTATCATGCGGCAGGTGTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGCGTTTTGTGTAACTGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGTTTCTCACCAGTTCTaGAGCCTGAATCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPVSHQF*SLNPQV
Trigger: GACTTGTGGATTCAGGCTCAAGAACTGGTGAGAAAC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCTCTCTTACCTCAAGCTaGTCTTGGGGTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPSLTSS*SWGFCS
Trigger: ACTGCAGAAACCCCAAGACAAGCTTGAGGTAAGAGA...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAAATCACAGAGGTCATaGCCGCCTATAAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGKSQRS*PPINRV
Trigger: AACCCTGTTTATAGGCGGCAATGACCTCTGTGATTT...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCATCAGAGTTTGGACTaGGCTCATAAGATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPHQSLD*AHKILS
Trigger: GCTGAGGATCTTATGAGCCAAGTCCAAACTCTGATG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCTTCTGCATCAGAGTTaGGACTTGGCTCATAAGATC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLLHQS*DLAHKI
Trigger: GATCTTATGAGCCAAGTCCAAACTCTGATGCAGAAG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCTTCTGCATCAGAGTTaGGACTTGGCTCATAAGATC +
Preference number: 5 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGLLHQS*DLAHKI
Trigger: GATCTTATGAGCCAAGTCCAAACTCTGATGCAGAAG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGAGGTTGGAACACTATaGGAAGCCTTCCACTCTGTA +
Preference number: 5 (lower is better)
Translates to: DCPLGFLWHQALKHVLVAEVGTL*EAFHSV
Trigger: TACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCTC...GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCGGTCACTGGAGTTGTTaGGTCGAGCTCCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVGHWSC*VELPLL
Trigger: CAGCAGTGGGAGCTCGACCAAACAACTCCAGTGACC...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCACTTTCTTCAGTTCTaGCTTCTCCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPHFLQF*LLQGAL
Trigger: CAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GACTTGAGGATATGCTCGTGGTGGCAGGCAGTTTGGGCTCTGGTTGGTCGTGGCCTCACGCTGTGTGTATaGGTGCCAGTAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: DLRICSWWQAVWALVGRGLTLCV*VPVGET
Trigger: AGTTTCTCCTACTGGCACCAATACACACAGCGTGAG...GCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCCTCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTGGGGGTGGCTTCTTGGTTATaGAAGGAGTTTGACCTCTCT +
Preference number: 5 (lower is better)
Translates to: LPMAPGIEACPGGREWLGVASWL*KEFDLS
Trigger: AGAGAGGTCAAACTCCTTCAATAACCAAGAAGCCAC...CCCCAGCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGTGGCTTCTTGGTTATaGAAGGAGTTTGACCTCTCT +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGVASWL*KEFDLS
Trigger: AGAGAGGTCAAACTCCTTCAATAACCAAGAAGCCAC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGAGGAACCAGATCATaGCAGAAATCACAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPRGTRS*QKSQRS
Trigger: TGACCTCTGTGATTTCTGCAATGATCTGGTTCCTCG...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGTCCTGGCTCCGCCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTGATTGTGATTGTGTCTaGGTTATGGCCTCTCGAAGT +
Preference number: 5 (lower is better)
Translates to: LSWLRHSLARCPLVASFVDCDCV*VMASRS
Trigger: ACTTCGAGAGGCCATAACCAAGACACAATCACAATC...AACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGGCGGAGCCAGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS GCA 90 bp CATAAGATCCTCAGCCTTTGCTCCGGGAACAGCTTGATTGAGGAATaGATTCGTGTCATTGGCATCACCCGTGCCCACGGCGTAGCCTGT +
Preference number: 5 (lower is better)
Translates to: HKILSLCSGNSLIEE*IRVIGITRAHGVAC
Trigger: ACAGGCTACGCCGTGGGCACGGGTGATGCCAATGACACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGGAGCTTCCAGTCAAATaGAAAGTCAAGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: CPLGFLWHQALKHVLVAGELPVK*KVKLQV
Trigger: AACCTGCAACTTGACTTTCAATTTGACTGGAAGCTC...CCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TTGGGCTCTGGTTGGTCGTGGCTTGGGCAGCCCTGCTGGAGGCAGGCCACAAAAGAGCTTCCAGTCAAATaGAAAGTCAAGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: LGSGWSWLGQPCWRQATKELPVK*KVKLQV
Trigger: AACCTGCAACTTGACTTTCAATTTGACTGGAAGCTC...TTTTGTGGCCTGCCTCCAGCAGGGCTGCCCAAGCCACGACCAACCAGAGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCAAATCACAGAGGTCATaGCCGCCTATAAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPKSQRS*PPINRV
Trigger: AACCCTGTTTATAGGCGGCAATGACCTCTGTGATTT...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTTAAATCACAGAGGTCATaGCCGCCTATAAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: PQAAPPGARRVSITCNVVKSQRS*PPINRV
Trigger: AACCCTGTTTATAGGCGGCAATGACCTCTGTGATTT...AACCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp TGCTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGCTTCTGCATCAGAGTTaGGACTTGGCTCATAAGATC +
Preference number: 5 (lower is better)
Translates to: CWRQATKSGSSHTWAAQELLHQS*DLAHKI
Trigger: GATCTTATGAGCCAAGTCCAAACTCTGATGCAGAAG...CTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTCCAGGGTCTCTGTTTaGCTTCCAAGTGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKSRVSV*LPSGSS
Trigger: GCTTGAACCACTTGGAAGCAAAACAGAGACCCTGGA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
CDS-3UTR CAA 90 bp AGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTGCTTCACGCAGGCACACTTTCTTCAGTTCTaGCTTCTCCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SSHTWAAQEMEGECFTQAHFLQF*LLQGAL
Trigger: CAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTG...TGCCTGCGTGAAGCACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCCAGTCGGCTGTGGGTGAAGTaGTTGGAGGTAGTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: VCIGASRRNWRCHAGGSSRLWVK*LEVVLR
Trigger: CCGCAAGACTACCTCCAACAACTTCACCCACAGCCG...ACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp TGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCCAGTTTCAGGAGAGGGGCACTaGAGTTTGGCTCGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: CVLVPVGETGDAMLEVPVSGEGH*SLARLW
Trigger: CCACAGCCGAGCCAAACTCAAGTGCCCCTCTCCTGA...AACTGGAACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp TGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGGAAACGCAGGGACCTaGGCGCAGGAAGGCACTGAC +
Preference number: 5 (lower is better)
Translates to: CVLVMASRSVRWVSEVFCGNAGT*AQEGTD
Trigger: GTCAGTGCCTTCCTGCGCCAAGGTCCCTGCGTTTCC...ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp TTCCCCAGGCTGCCCCACCAGGTGCACGTCGCGTATCTATCACCTGCAATGTGGTATCGTATGAGGTCATaGCCTTCTTTAGCTGAGACC +
Preference number: 5 (lower is better)
Translates to: FPRLPHQVHVAYLSPAMWYRMRS*PSLAET
Trigger: GGTCTCAGCTAAAGAAGGCAATGACCTCATACGATA...CCACATTGCAGGTGATAGATACGCGACGTGCACCTGGTGGGGCAGCCTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS TCA 90 bp TGGACTTGGCTCATAAGATCCTCAGCCTTTGCTCCGGGAACAGCTTaGTTGAGGAATGCATTCGTGTCATTGGCATCACCCGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: WTWLIRSSAFAPGTA*LRNAFVSLASPVPT
Trigger: CGTGGGCACGGGTGATGCCAATGACACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTTATGAGCCAAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS TCA 90 bp CATAGCTGCCCTTCCAATGTACTCTTTCTAGGAGAGGTATGGATCTaGGGGGTCCAGTTCTGCGTGGCTGGAGAGGCCTCACAATCATGG +
Preference number: 5 (lower is better)
Translates to: HSCPSNVLFLGEVWI*GVQFCVAGEASQSW
Trigger: CCATGATTGTGAGGCCTCTCCAGCCACGCAGAACTGGACCCCTCAGATCCATACCTCTCCTAGAAAGAGTACATTGGAAGGGCAGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416713.5
CDS GCA 90 bp TCTCAGGAAGGGCTCATTCTGAGTGGGACAGGTGATGGGCATCTCTaGTCTCAGGTCCAGGGTCTCTGTTTTGCTTCCAAGTGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SQEGLILSGTGDGHL*SQVQGLCFASKWFK
Trigger: CTTGAACCACTTGGAAGCAAAACAGAGACCCTGGACCTGAGAGCAGAGATGCCCATCACCTGTCCCACTCAGAATGAGCCCTTCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000444257.5
ENST00000479065.5
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGCCTAATTTATTTGGGTaGCATGGGAATGGAGAATTC +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRPNLFG*HGNGEF
Trigger: GAATTCTCCATTCCCATGCAACCCAAATAAATTAGG...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCAGAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCGAGCTTCCAGTCAAATaGAAAGTCAAGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: AEGGEESGYREFRVRTHPELPVK*KVKLQV
Trigger: AACCTGCAACTTGACTTTCAATTTGACTGGAAGCTC...GGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGTCTCTTACCTCAAGCTaGTCTTGGGGTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKSLTSS*SWGFCS
Trigger: ACTGCAGAAACCCCAAGACAAGCTTGAGGTAAGAGA...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCAGGGCTCCAATTACGTaGATGTCAGCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLRAPIT*MSAGFS
Trigger: GCTGAAGCCGGCTGACATCAACGTAATTGGAGCCCT...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CTGGAGGCAGGCCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATAAATCACAGAGGTCATaGCCGCCTATAAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: LEAGHKKWQLPHLGCTRDKSQRS*PPINRV
Trigger: AACCCTGTTTATAGGCGGCAATGACCTCTGTGATTT...ATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGGCCTGCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CGTATGAGGTCATTGCCTTCTTTAGCTGAGACCAAGTGCAGCTGCCAGAACCTCTACAGCTCCCTCAGGTaGACGATCTCAAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: RMRSLPSLAETKCSCQNLYSSLR*TISSTV
Trigger: GACGGTGCTTGAGATCGTCAACCTGAGGGAGCTGTA...GAGGTTCTGGCAGCTGCACTTGGTCTCAGCTAAAGAAGGCAATGACCTCATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTTGCTCCGGGAACAGCTaGATTGAGGAATGCATTCGT +
Preference number: 5 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSCSGNS*IEECIR
Trigger: ACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCA...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCACAAAAAGTGGCAGCTCCCACACCTGGGCTGCACAAGAGATGGAAGGTGAGTCAGTCTTTCTCCAGGTaGATGTCGGGGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PQKVAAPTPGLHKRWKVSQSFSR*MSGLFF
Trigger: GAAAAACAGCCCCGACATCAACCTGGAGAAAGACTG...ACTCACCTTCCATCTCTTGTGCAGCCCAGGTGTGGGAGCTGCCACTTTTTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTGGGGTGAGTGTGTTTaGGAAGAAAGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVWGECV*EERLHH
Trigger: GTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000411743.5
ENST00000422425.6
ENST00000436775.1
ENST00000444257.5
CDS-3UTR CAA 90 bp GTTTTGGAAGAAAGGCTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGCTATGGCACCAGGCATaGAAGCATGTCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VLEERLHHNRKVLTLCVLLWHQA*KHVLVA
Trigger: GGCCACCAGGACATGCTTCAATGCCTGGTGCCATAG...CAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAGCCTTTCTTCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp CCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCTTAATAGGTATGTGTaGGATTGGACTGAATGGCAA +
Preference number: 5 (lower is better)
Translates to: PGLPMAPGIEACPGGREWLNRYV*DWTEWQ
Trigger: TTGCCATTCAGTCCAATCCAACACATACCTATTAAG...CCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCCTGGTGGCCGGGAGTGGCCTTAATAGGTATGTGTaGGATTGGACTGAATGGCAA +
Preference number: 5 (lower is better)
Translates to: LGFLWHQALKHVLVAGSGLNRYV*DWTEWQ
Trigger: TTGCCATTCAGTCCAATCCAACACATACCTATTAAG...GCCACTCCCGGCCACCAGGACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCCTCAGTGCTTCGCATaGTCCTGGATACAAAACAGT +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKPQCFA*SWIQNS
Trigger: ACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCGAGGAACCAGATCATaGCAGAAATCACAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: APRSCDCPLGFLWHQALKRGTRS*QKSQRS
Trigger: TGACCTCTGTGATTTCTGCAATGATCTGGTTCCTCG...CTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCTTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422425.6
CDS TCA 90 bp ACCCTGGTTTACTTTCTCTGTATGACAGTCCCCGATACTGTGTGGTaGCATCGGGGAGGTCGTCTGGTTTGGAGCCAATTCCATTGCCAG +
Preference number: 5 (lower is better)
Translates to: TLVYFLCMTVPDTVW*HRGGRLVWSQFHCQ
Trigger: CTGGCAATGGAATTGGCTCCAAACCAGACGACCTCCCCGATGTCACCACACAGTATCGGGGACTGTCATACAGAGAAAGTAAACCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp GAGGGCGGTGAAGAGAGTGGCTATAGGGAGTTTAGGGTGAGGACCCACCCCCGGTTACTGAAGAACACATaGATGAGCTTCCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: EGGEESGYREFRVRTHPRLLKNT*MSFQSN
Trigger: ATTTGACTGGAAGCTCATCAATGTGTTCTTCAGTAA...CCGGGGGTGGGTCCTCACCCTAAACTCCCTATAGCCACTCTCTTCACCGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACACTGCATCACCACCTaGGCCAGCCGGGTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HLPTDALVVTHHHVASWLHCITT*ASRVVS
Trigger: GGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGTG...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTACCTCAAGCTTGTCTaGGGGTTTCTGCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVYLKLV*GFLQSG
Trigger: ACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGTA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTCCAATGCTCCAAGAGAGTCCCCTCCAAGATGTGGGTAGGTCACTGGAGTTGGAGGTTGGAACACTATaGGAAGCCTTCCACTCTGTA +
Preference number: 5 (lower is better)
Translates to: PPMLQESPLQDVGRSLELEVGTL*EAFHSV
Trigger: TACAGAGTGGAAGGCTTCCAATAGTGTTCCAACCTC...CAACTCCAGTGACCTACCCACATCTTGGAGGGGACTCTCTTGGAGCATTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CAA 90 bp GCTGGAGGTTCCAGTTCACTTTCTTCAGTTCTTGCTTCTCCAGGGAGCTTTGCGGCTGGTGGACAGAGGTaGGAACACTATTGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: AGGSSSLSSVLASPGSFAAGGQR*EHYWKP
Trigger: AGGCTTCCAATAGTGTTCCAACCTCTGTCCACCAGC...CGCAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTGAACTGGAACCTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGAGGGCGGCCACCACTTaGATGTCTGCTGGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: THLPTDALVVTHHHVASWRAATT*MSAGRS
Trigger: GCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCT...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTCTCTCGTTCAGTGGGGTGAGTGTGTTTTGGAAGAAAGGCTGCACCACAACCGATGTCCAGGGCCTGTaGGATGTGCTGAACATATTC +
Preference number: 5 (lower is better)
Translates to: PLSFSGVSVFWKKGCTTTDVQGL*DVLNIF
Trigger: GAATATGTTCAGCACATCCAACAGGCCCTGGACATC...GGTTGTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCACTGAACGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp CTGCACCACAACCGCAAAGTCCTCACGCTGTGTGTATTGGTGCCAGTAGGAGAACTCACGCTGTGTGTATaGGTGCCAGTAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: LHHNRKVLTLCVLVPVGELTLCV*VPVGET
Trigger: AGTTTCTCCTACTGGCACCAATACACACAGCGTGAG...TTCTCCTACTGGCACCAATACACACAGCGTGAGGACTTTGCGGTTGTGGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS CCA 90 bp CTCCTGAGAGGGACACTTCATTGGCCTCCCGTGTTTTACACTCAATaGCTCATCTTTCTCTCCTGCTGGCTCCATCATCCTATTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LLRGTLHWPPVFYTQ*LIFLSCWLHHPIPE
Trigger: CTCTGGAATAGGATGATGGAGCCAGCAGGAGAGAAAGATGAGCCATTGAGTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS-3UTR CAA 90 bp GCTTCTTGGTTATTGAAGGAGTTTGACCTCTCTGCCAGGCTGCGACATGCACAGGTATCGGAGGGGTCTTaGTCAGGACATCTGATTTCC +
Preference number: 5 (lower is better)
Translates to: ASWLLKEFDLSARLRHAQVSEGS*SGHLIS
Trigger: GGAAATCAGATGTCCTGACAAAGACCCCTCCGATAC...CTGTGCATGTCGCAGCCTGGCAGAGAGGTCAAACTCCTTCAATAACCAAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTGGGAGGTCGTCTGGTTaGGAGCCAATTCCATTGCCA +
Preference number: 5 (lower is better)
Translates to: CVLVMASRSVRWVSEVFCGRSSG*EPIPLP
Trigger: TGGCAATGGAATTGGCTCCAAACCAGACGACCTCCC...ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTGCTGCACAGCAGAGGTaGAGGTGGGGCCCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRAAQQR*RWGPAS
Trigger: GCTGGCTGGGCCCCACCTCAACCTCTGCTGTGCAGC...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAGTGGACCCGGCCCCATaGCCTGCCGTGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQVDPAP*PAVRES
Trigger: TGACTCTCTCACGGCAGGCAATGGGGCCGGGTCCAC...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GACAACATGAATAAACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTGTGGACCCGGCCCCATaGCCTGCCGTGAGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: DNMNKHIKTVNRDVGTPRVDPAP*PAVRES
Trigger: TGACTCTCTCACGGCAGGCAATGGGGCCGGGTCCAC...ACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGTTTATTCATGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp ATTTCAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTCCCTTCAGGGAAGGGTaGAATTCCCGGAGGATGTTC +
Preference number: 5 (lower is better)
Translates to: ISMEEKAMLSRPWGPAHCPFREG*NSRRMF
Trigger: GAACATCCTCCGGGAATTCAACCCTTCCCTGAAGGG...ACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGGGAGCGAAGAAAGAGTaGTCAGGCAATCCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: QWKKRQCSQDLGAQHIVKGAKKE*SGNPSE
Trigger: CTCGGAAGGATTGCCTGACAACTCTTTCTTCGCTCC...CTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp ACGCTGTGTGTATTGGTGCCAGTAGGAGAAACTGGAGATGCCATGCTGGAGGTTCACTTTCTTCAGTTCTaGCTTCTCCAGGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: TLCVLVPVGETGDAMLEVHFLQF*LLQGAL
Trigger: CAAAGCTCCCTGGAGAAGCAAGAACTGAAGAAAGTG...AACCTCCAGCATGGCATCTCCAGTTTCTCCTACTGGCACCAATACACACAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000444257.5
CDS-3UTR CAA 90 bp CTATTGGAAGCCTTCCACTCTGTACACAGGAAGTCACTGCCCCAGTTCTCAATGCTCACGCTGTGTGTATaGGTGCCAGTAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: LLEAFHSVHRKSLPQFSMLTLCV*VPVGET
Trigger: AGTTTCTCCTACTGGCACCAATACACACAGCGTGAG...CATTGAGAACTGGGGCAGTGACTTCCTGTGTACAGAGTGGAAGGCTTCCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTGTTGGAGGTAGTCTaGCGGCCCACTGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: THLPTDALVVTHHHVASWLLEVV*RPTGSS
Trigger: GCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAA...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTCTGGTGCATTTCCTGTaGGATTTGCTGACCCAGGAG +
Preference number: 5 (lower is better)
Translates to: CVLVMASRSVRWVSEVFCLVHFL*DLLTQE
Trigger: CTCCTGGGTCAGCAAATCCAACAGGAAATGCACCAG...ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp TGTGTCTTGGTTATGGCCTCTCGAAGTGTGCGATGGGTTTCAGAGGTTTTCTGTACAGGTCAAGGGGCCTaGGAAATATTCACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: CVLVMASRSVRWVSEVFCTGQGA*EIFTAE
Trigger: CTCGGCTGTGAATATTTCCAAGGCCCCTTGACCTGT...ACAGAAAACCTCTGAAACCCATCGCACACTTCGAGAGGCCATAACCAAGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp AAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATGCAAGCGTTGGGGCCCAGCACATaGTTAAGCTGGCCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: KTVNRDVGTPRVHVYMQALGPST*LSWPKL
Trigger: CAGCTTTGGCCAGCTTAACAATGTGCTGGGCCCCAA...CGCTTGCATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS TCA 90 bp GAACCTCAGCATGGAGGATGTCCAGGGCCTTTCCAATGTTGTCTGTaGAGTTCTGGGGAGAATAGTGGACCAGATCATTGCAGAAATCAC +
Preference number: 5 (lower is better)
Translates to: EPQHGGCPGPFQCCL*SSGENSGPDHCRNH
Trigger: GTGATTTCTGCAATGATCTGGTCCACTATTCTCCCCAGAACTTCACAGACAACATTGGAAAGGCCCTGGACATCCTCCATGCTGAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000436544.1
CDS GCA 90 bp TACACGTATACATGCAAGCGGGGAGGTGAAGATTCAGGGATTTGGTaGTTTTCTGGTGCATTTCCTGTTGGATTTGCTGACCCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: YTYTCKRGGEDSGIW*FSGAFPVGFADPGV
Trigger: GACTCCTGGGTCAGCAAATCCAACAGGAAATGCACCAGAAAAGCACCAAATCCCTGAATCTTCACCTCCCCGCTTGCATGTATACGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS CCA 90 bp GTGTACACGTATACATGCAAGCGGGGAGGTGAAGATTCAGGGATTTaGTGCTTTTCTGGTGCATTTCCTGTTGGATTTGCTGACCCAGGA +
Preference number: 5 (lower is better)
Translates to: VYTYTCKRGGEDSGI*CFSGAFPVGFADPG
Trigger: TCCTGGGTCAGCAAATCCAACAGGAAATGCACCAGAAAAGCACCAAATCCCTGAATCTTCACCTCCCCGCTTGCATGTATACGTGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTACAGCTCCCTCAGGTaGACGATCTCAAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: APQCFALSWIQNSCLIGMYSSLR*TISSTV
Trigger: GACGGTGCTTGAGATCGTCAACCTGAGGGAGCTGTA...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGCAGAGCAGCCACAACTaGGATGTCTGCAGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: THLPTDALVVTHHHVASWQSSHN*DVCRSQ
Trigger: CTGAGACCTGCAGACATCCAAGTTGTGGCTGCTCTG...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp AGTGTGACCAGCTTCCAGTCTTTCTCCAGGTTGATGTCGGGGCTGTTTTTCATTCAGTCTTTCTCCAGGTaGATGTCGGGGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SVTSFQSFSRLMSGLFFIQSFSR*MSGLFF
Trigger: GAAAAACAGCCCCGACATCAACCTGGAGAAAGACTG...AATGAAAAACAGCCCCGACATCAACCTGGAGAAAGACTGGAAGCTGGTCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000411743.5
CDS-3UTR CAA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTTTGTTGGAGGTAGTCTaGCGGCCCACTGGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCLLEVV*RPTGSS
Trigger: GCTGGAACCAGTGGGCCGCAAGACTACCTCCAACAA...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TATCTACACGCAACCGCTCGCCTGACACACCCTGAGCTTCTCCACTTCCGTGTTTGTAATGGACTTCACTaGTTGGAAGAAACAGAGCAA +
Preference number: 5 (lower is better)
Translates to: YLHATARLTHPELLHFRVCNGLH*LEETEQ
Trigger: TTGCTCTGTTTCTTCCAACAAGTGAAGTCCATTACA...AACACGGAAGTGGAGAAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CCACTCATTAGCACGCTGCCCCCTTGTGGCCAGCTTCGTTCTAGTTGTTTTCCCTTTGGGGGCAGCTATTaGAAACATTTAGGACAAATG +
Preference number: 5 (lower is better)
Translates to: PLISTLPPCGQLRSSCFPFGGSY*KHLGQM
Trigger: CATTTGTCCTAAATGTTTCAAATAGCTGCCCCCAAA...GGGAAAACAACTAGAACGAAGCTGGCCACAAGGGGGCAGCGTGCTAATGAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS GCA 90 bp AATCCTTCCGAGGTCTTTGGCATGTCCACGTTTTCAAAGAACGGCTaGACAACCACAGTAAAATCTTCCCTTGTGTCATATCGCCCACTC +
Preference number: 5 (lower is better)
Translates to: NPSEVFGMSTFSKNG*TTTVKSSLVSYRPL
Trigger: GAGTGGGCGATATGACACAAGGGAAGATTTTACTGTGGTTGTGCAGCCGTTCTTTGAAAACGTGGACATGCCAAAGACCTCGGAAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000481449.1
CDS CCA 90 bp CACAAGTCTTCAGCACCATCGTGGGGTATGACTCTCTTTCCAGTGTaGCACACAGGCATTGGAACAGAAGGACTGAAATATCTGATGATG +
Preference number: 5 (lower is better)
Translates to: HKSSAPSWGMTLFPV*HTGIGTEGLKYLMM
Trigger: CATCATCAGATATTTCAGTCCTTCTGTTCCAATGCCTGTGTGCCACACTGGAAAGAGAGTCATACCCCACGATGGTGCTGAAGACTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS-3UTR CAA 90 bp CAATGGAAGAAAAGGCAATGCTCTCAAGACCTTGGGGCCCAGCACATTGTTAAGTCTCTTACCTCAAGCTaGTCTTGGGGTTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: QWKKRQCSQDLGAQHIVKSLTSS*SWGFCS
Trigger: ACTGCAGAAACCCCAAGACAAGCTTGAGGTAAGAGA...CTTAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATTGCCTTTTCTTCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp AAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATGCAAGCGGTATCGGAGGGGTCTTaGTCAGGACATCTGATTTCC +
Preference number: 5 (lower is better)
Translates to: KTVNRDVGTPRVHVYMQAVSEGS*SGHLIS
Trigger: GGAAATCAGATGTCCTGACAAAGACCCCTCCGATAC...CGCTTGCATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTAAGGGCTCCAATTACGTaGATGTCAGCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: HLPTDALVVTHHHVASWLRAPIT*MSAGFS
Trigger: GCTGAAGCCGGCTGACATCAACGTAATTGGAGCCCT...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTAGGGCTCCAATTACGTaGATGTCAGCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCRAPIT*MSAGFS
Trigger: GCTGAAGCCGGCTGACATCAACGTAATTGGAGCCCT...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGTTGGAGCCAATTCCATaGCCAGCGGTCAGAGAATCC +
Preference number: 5 (lower is better)
Translates to: LFSQVNSELLATYFEAYRLEPIP*PAVRES
Trigger: GGATTCTCTGACCGCTGGCAATGGAATTGGCTCCAA...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGGGGTGAGTGTGTTTaGGAAGAAAGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: APQCFALSWIQNSCLIGMWGECV*EERLHH
Trigger: GTGGTGCAGCCTTTCTTCCAAAACACACTCACCCCA...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAGAGGGGCACTTGAGTTaGGCTCGGCTGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQEGHLS*ARLWVK
Trigger: CTTCACCCACAGCCGAGCCAAACTCAAGTGCCCCTC...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TATCTACACGCAACCGCTCGCCTGACACACCCTGAGCTTCTCCACTTCCGTGTTTTTTATTTTGATCCTTaGAATGGTCCCAAACAAGCG +
Preference number: 5 (lower is better)
Translates to: YLHATARLTHPELLHFRVFYFDP*NGPKQA
Trigger: CGCTTGTTTGGGACCATTCAAAGGATCAAAATAAAA...AACACGGAAGTGGAGAAGCTCAGGGTGTGTCAGGCGAGCGGTTGCGTGTAGATA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS GCA 90 bp CGCAAGCCCATTCTGTTGAGCAGAGGGGCACAGGTAACACTGGCTTaGATTACTGAAGAACACATTGATGAGCTTCCAGTCAAATTGAAA +
Preference number: 5 (lower is better)
Translates to: RKPILLSRGAQVTLA*ITEEHIDELPVKLK
Trigger: TTTCAATTTGACTGGAAGCTCATCAATGTGTTCTTCAGTAATGCAAGCCAGTGTTACCTGTGCCCCTCTGCTCAACAGAATGGGCTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS-3UTR CAA 90 bp AGAAGTTGTGACTGTCCCCTGGGCTTCCTATGGCACCAGGCATTGAAGCATGTCTTACTGAAGAACACATaGATGAGCTTCCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: RSCDCPLGFLWHQALKHVLLKNT*MSFQSN
Trigger: ATTTGACTGGAAGCTCATCAATGTGTTCTTCAGTAA...GACATGCTTCAATGCCTGGTGCCATAGGAAGCCCAGGGGACAGTCACAACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTGAGAGGGACACTTCATaGGCCTCCCGTGTTTTACAC +
Preference number: 5 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCERDTS*ASRVLH
Trigger: GTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCTC...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTACCTCAAGCTTGTCTaGGGGTTTCTGCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: THLPTDALVVTHHHVASWYLKLV*GFLQSG
Trigger: ACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGTA...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp GCACCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGCCCACTCTCAATCAGTaGGTGGGTCTTCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: APQCFALSWIQNSCLIGMPTLNQ*VGLLLK
Trigger: TTTCAGGAGAAGACCCACCAACTGATTGAGAGTGGG...CATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTACAGGCTCCAGCATATaGTTCCAGAGAGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCTGSSI*FQRALA
Trigger: AGCCAGTGCTCTCTGGAACAATATGCTGGAGCCTGT...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTTTGGAGCCAATTCCATaGCCAGCGGTCAGAGAATCC +
Preference number: 5 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCLEPIP*PAVRES
Trigger: GGATTCTCTGACCGCTGGCAATGGAATTGGCTCCAA...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGGATGTCCAGGGCCTGTaGGATGTGCTGAACATATTC +
Preference number: 5 (lower is better)
Translates to: THLPTDALVVTHHHVASWDVQGL*DVLNIF
Trigger: GAATATGTTCAGCACATCCAACAGGCCCTGGACATC...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CCTCAGTGCTTCGCATTGTCCTGGATACAAAACAGTTGCTTAATAGGTATGTGTAGTGGGTTTGGTGACTaGAGGATATGCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PQCFALSWIQNSCLIGMCSGFGD*RICSWW
Trigger: CCACCACGAGCATATCCTCAAGTCACCAAACCCACT...ACACATACCTATTAAGCAACTGTTTTGTATCCAGGACAATGCGAAGCACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TTCATATCTGAATCCCAGGAGCCCAGCTGGTCGATCTGTTTTAAAGTAGGGCACTACTCGCCACTTACTTaGAAGCCTACAGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: FISESQEPSWSICFKVGHYSPLT*KPTGMR
Trigger: TCTCATTCCTGTAGGCTTCAAAGTAAGTGGCGAGTA...GTGCCCTACTTTAAAACAGATCGACCAGCTGGGCTCCTGGGATTCAGATATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACATACCTGACCAAGGACTaGTGGAAACGCAGGGACCTT +
Preference number: 5 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTYLTKD*WKRRDL
Trigger: AAGGTCCCTGCGTTTCCACAAGTCCTTGGTCAGGTA...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS TCA 90 bp TGGACCTGGTTCGGACATGTGATATTGATCTTGTTTTCAAACTTATaGCGAGTCGTCTTCTGGCCAACAGGCTCCAGCATATTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: WTWFGHVILILFSNL*RVVFWPTGSSILFQ
Trigger: CTGGAACAATATGCTGGAGCCTGTTGGCCAGAAGACGACTCGTCATAAGTTTGAAAACAAGATCAATATCACATGTCCGAACCAGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000481449.1
CDS-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGGTTTCTCACCAGTTCTaGAGCCTGAATCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: THLPTDALVVTHHHVASWVSHQF*SLNPQV
Trigger: GACTTGTGGATTCAGGCTCAAGAACTGGTGAGAAAC...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGAGAGGGACACTTCATaGGCCTCCCGTGTTTTACAC +
Preference number: 5 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHERDTS*ASRVLH
Trigger: GTGTAAAACACGGGAGGCCAATGAAGTGTCCCTCTC...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACATACCTCAAGCTTGTCTaGGGGTTTCTGCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTYLKLV*GFLQSG
Trigger: ACCAGACTGCAGAAACCCCAAGACAAGCTTGAGGTA...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAGGTAGGTCACTGGAGTaGTTTGGTCGAGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQGRSLE*FGRAPT
Trigger: AGTGGGAGCTCGACCAAACAACTCCAGTGACCTACC...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp TTGTTTTCCCAGGTAAATTCTGAGCTACTCGCCACTTACTTTGAAGCCTACAGGCATTTCCTGTTGGATTaGCTGACCCAGGAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: LFSQVNSELLATYFEAYRHFLLD*LTQESD
Trigger: ATCAGACTCCTGGGTCAGCAAATCCAACAGGAAATG...CCTGTAGGCTTCAAAGTAAGTGGCGAGTAGCTCAGAATTTACCTGGGAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS TCA 90 bp CTCCTGAAACTTCTTGTTGAATTCGATGAGGGTAGCAAGTTCTGTTaGGTTATCATCAAACTTCAGGACACAGGGACACAGAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: LLKLLVEFDEGSKFC*VIIKLQDTGTQRPE
Trigger: CTCAGGTCTCTGTGTCCCTGTGTCCTGAAGTTTGATGATAACTCAACAGAACTTGCTACCCTCATCGAATTCAACAAGAAGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
CDS TCA 90 bp TTCAGGGATTTGGTGCTTTTCTGGTGCATTTCCTGTTGGATTTGCTaGCCCAGGAGTCTGATAAGAACCCTGGTTTACTTTCTCTGTATG +
Preference number: 5 (lower is better)
Translates to: FRDLVLFWCISCWIC*PRSLIRTLVYFLCM
Trigger: CATACAGAGAAAGTAAACCAGGGTTCTTATCAGACTCCTGGGTCAGCAAATCCAACAGGAAATGCACCAGAAAAGCACCAAATCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CAGATACAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATCCCACTCTCAATCAGTaGGTGGGTCTTCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: QIQRIFSSPGTGLELMFHPTLNQ*VGLLLK
Trigger: TTTCAGGAGAAGACCCACCAACTGATTGAGAGTGGG...ATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTGTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAAAGTGGGTTTGGTGACTaGAGGATATGCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQSGFGD*RICSWW
Trigger: CCACCACGAGCATATCCTCAAGTCACCAAACCCACT...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp AAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATGCAAGCGATGTGGTTCGTCTGCTaGATTTTTGTTTCCCATGCT +
Preference number: 5 (lower is better)
Translates to: KTVNRDVGTPRVHVYMQAMWFVC*IFVSHA
Trigger: AGCATGGGAAACAAAAATCAAGCAGACGAACCACAT...CGCTTGCATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp ACACATAAAGACAGTAAACAGAGACGTAGGAACACCACGTGTACACGTATACATAATGCTCTCAAGACCTaGGGGCCCAGCACATTGTTA +
Preference number: 5 (lower is better)
Translates to: THKDSKQRRRNTTCTRIHNALKT*GPSTLL
Trigger: TAACAATGTGCTGGGCCCCAAGGTCTTGAGAGCATT...ATGTATACGTGTACACGTGGTGTTCCTACGTCTCTGTTTACTGTCTTTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS TCA 90 bp CTCCTGAAACTTCTTGTTGAATTCGATGAGGGTAGCAAGTTCTGTTaGGTTATCATCAAACTTCAGGACACAGGGACACAGAGACCTGTA +
Preference number: 5 (lower is better)
Translates to: LLKLLVEFDEGSKFC*VIIKLQDTGTQRPV
Trigger: TACAGGTCTCTGTGTCCCTGTGTCCTGAAGTTTGATGATAACTCAACAGAACTTGCTACCCTCATCGAATTCAACAAGAAGTTTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481449.1
CDS TCA 90 bp CCAAAGAGAAACCCTCATCCCACCAAGATCACCATCCTGAATAAGTaGTGCAGAAACGCTGGCTTGAGACTCAATACATTTCTTTTAACT +
Preference number: 5 (lower is better)
Translates to: PKRNPHPTKITILNK*CRNAGLRLNTFLLT
Trigger: AGTTAAAAGAAATGTATTGAGTCTCAAGCCAGCGTTTCTGCATCACTTATTCAGGATGGTGATCTTGGTGGGATGAGGGTTTCTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481449.1
CDS-3UTR CAA 90 bp CTGGATACAAAACAGTTGCTTAATAGGTATGTGTTGGATTGGACTGAATGGCAACATCAGAGTTTGGACTaGGCTCATAAGATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LDTKQLLNRYVLDWTEWQHQSLD*AHKILS
Trigger: GCTGAGGATCTTATGAGCCAAGTCCAAACTCTGATG...TTGCCATTCAGTCCAATCCAACACATACCTATTAAGCAACTGTTTTGTATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp CAAAGGATTTTCTCTTCTCCAGGAACAGGTCTGGAGTTAATGTTCCATGGAACATCCATGGAACACACTTaGAGACACAGTAGTCTATGT +
Preference number: 5 (lower is better)
Translates to: QRIFSSPGTGLELMFHGTSMEHT*RHSSLC
Trigger: ACATAGACTACTGTGTCTCAAAGTGTGTTCCATGGA...TGTTCCATGGAACATTAACTCCAGACCTGTTCCTGGAGAAGAGAAAATCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS-3UTR CAA 90 bp CATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACCTAATTTATTTGGGTaGCATGGGAATGGAGAATTC +
Preference number: 5 (lower is better)
Translates to: HLPTDALVVTHHHVASWLPNLFG*HGNGEF
Trigger: GAATTCTCCATTCCCATGCAACCCAAATAAATTAGG...TAACCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS-3UTR CAA 90 bp ACACATTTACCTACTGATGCCCTAGTAGTTACACATCATCACGTGGCTTCTTGGTTACTGAAGAACACATaGATGAGCTTCCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: THLPTDALVVTHHHVASWLLKNT*MSFQSN
Trigger: ATTTGACTGGAAGCTCATCAATGTGTTCTTCAGTAA...CCAAGAAGCCACGTGATGATGTGTAACTACTAGGGCATCAGTAGGTAAATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS TCA 72 bp CACCACAGAGAAGTCCTCCTGCGTGTCATAGCGGCCTaGCCCCACCAGCTCGCGCATGCTGCTCCGGTAGGC +
Preference number: 6 (lower is better)
Translates to: HHREVLLRVIAA*PHQLAHAAPVG
Trigger: GCCTACCGGAGCAGCATGCGCGAGCTGGTGGGGTCAGGCCGCTATGACACGCAGGAGGACTTCTCTGTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS GCA 72 bp GCAGCTCCAGGAGGAAAATGCCTGGCCGCAGCCCCATaGCAGAATGCTCCAGGTGACTCGGGCCTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: AAPGGKCLAAAP*QNAPGDSGLWK
Trigger: CTTCCAGAGGCCCGAGTCACCTGGAGCATTCTGGCATGGGGCTGCGGCCAGGCATTTTCCTCCTGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000422425.6
CDS TCA 72 bp TCATCTCCGCCGACGCTCCAGGACAGGCCTCGGTACTaGGTCAAGACGTCCAAGACGTTCCCAGGTGTGGAC +
Preference number: 6 (lower is better)
Translates to: SSPPTLQDRPRY*VKTSKTFPGVD
Trigger: GTCCACACCTGGGAACGTCTTGGACGTCTTGACTCAGTACCGAGGCCTGTCCTGGAGCGTCGGCGGAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
CDS TCA 72 bp TCACAGTCAGAGAGTCACCCAGGGCGGCCACCACTTTaGTGTCTGCTGGTCGGAGCTGGTGGACAGAGGTTG +
Preference number: 6 (lower is better)
Translates to: SQSESHPGRPPL*CLLVGAGGQRL
Trigger: CAACCTCTGTCCACCAGCTCCGACCAGCAGACATCAAAGTGGTGGCCGCCCTGGGTGACTCTCTGACTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479065.5
CDS CCA 72 bp CTATTCCAGAGATGCCAGGCCAGCGTGGTAGAATCCTaGAGTCGGGGGTCCTCCGAGTGTAGAGATGGGGTG +
Preference number: 6 (lower is better)
Translates to: LFQRCQASVVES*SRGSSECRDGV
Trigger: CACCCCATCTCTACACTCGGAGGACCCCCGACTCCAGGATTCTACCACGCTGGCCTGGCATCTCTGGAATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS CCA 72 bp AGAGGTATGGATCTGAGGGGTCCAGTTCTGCGTGGCTaGAGAGGCCTCACAATCATGGCGGAAGGCGAACGG +
Preference number: 6 (lower is better)
Translates to: RGMDLRGPVLRG*RGLTIMAEGER
Trigger: CCGTTCGCCTTCCGCCATGATTGTGAGGCCTCTCCAGCCACGCAGAACTGGACCCCTCAGATCCATACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416713.5
CDS CAA 90 bp GACGAAAGCCCTTGGGAGCTCCTCAGAGAGGATGTCCAGGGCCTGTaGGATGTGCTGAACATATTCCGTGGCCAAGTGGGCCTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: DESPWELLREDVQGL*DVLNIFRGQVGLLP
Trigger: AGGAAGGAGGCCCACTTGGCCACGGAATATGTTCAGCACATCCAACAGGCCCTGGACATCCTCTCTGAGGAGCTCCCAAGGGCTTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444257.5
CDS GCA 72 bp TTCTCTCCTGCTGGCTCCATCATCCTATTCCAGAGATaGCAGGCCAGCGTGGTAGAATCCTGGAGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: FSPAGSIILFQR*QASVVESWSRG
Trigger: CCCCCGACTCCAGGATTCTACCACGCTGGCCTGGCATCTCTGGAATAGGATGATGGAGCCAGCAGGAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS GCA 72 bp TGCACTGGGCACTTGTCTGGGTTTCCCAGGAACACCTaGCGCATGATAGTGGGGTTCAGGAAGTCCACGAGG +
Preference number: 6 (lower is better)
Translates to: CTGHLSGFPRNT*RMIVGFRKSTR
Trigger: CCTCGTGGACTTCCTGAACCCCACTATCATGCGGCAGGTGTTCCTGGGAAACCCAGACAAGTGCCCAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000479065.5
CDS CAA 72 bp TGCCGCATGATAGTGGGGTTCAGGAAGTCCACGAGGTaGACCAGGACTCTGGGCACCTCTCTATGCAGGACG +
Preference number: 6 (lower is better)
Translates to: CRMIVGFRKSTR*TRTLGTSLCRT
Trigger: CGTCCTGCATAGAGAGGTGCCCAGAGTCCTGGTCAACCTCGTGGACTTCCTGAACCCCACTATCATGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000411743.5
ENST00000422425.6
ENST00000479065.5
CDS GCA 72 bp CTCAGCCTTTGCTCCGGGAACAGCTTGATTGAGGAATaGATTCGTGTCATTGGCATCACCCGTGCCCACGGC +
Preference number: 6 (lower is better)
Translates to: LSLCSGNSLIEE*IRVIGITRAHG
Trigger: GCCGTGGGCACGGGTGATGCCAATGACACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCAAAGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS GCA 72 bp TGGGCATCTCTGCTCTCAGGTCCAGGGTCTCTGTTTTaGTTCCAAGTGGTTCAAGCTGGCCTGCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: WASLLSGPGSLF*FQVVQAGLLHW
Trigger: CCAGTGCAGCAGGCCAGCTTGAACCACTTGGAAGCAAAACAGAGACCCTGGACCTGAGAGCAGAGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000479065.5
CDS CCA 72 bp TCCAGGCTTCCTGATAAGACCACTGCATCACCACCTTaGCCAGCCGGGTGGTCTCCTCTGAGCAATTACAGG +
Preference number: 6 (lower is better)
Translates to: SRLPDKTTASPP*PAGWSPLSNYR
Trigger: CCTGTAATTGCTCAGAGGAGACCACCCGGCTGGCCAAGGTGGTGATGCAGTGGTCTTATCAGGAAGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS CCA 72 bp TCCCCGATACTGTGTGGTGACATCGGGGAGGTCGTCTaGTTTGGAGCCAATTCCATTGCCAGCGGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: SPILCGDIGEVV*FGANSIASGQR
Trigger: TCTCTGACCGCTGGCAATGGAATTGGCTCCAAACCAGACGACCTCCCCGATGTCACCACACAGTATCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
CDS CCA 72 bp AGAGGTAAGGGCTCTCCATGTTGTTCCAGAGTGCGATaGCCATCTCGGCATGCCCGCGGTCTGAGAAGTGAA +
Preference number: 6 (lower is better)
Translates to: RGKGSPCCSRVR*PSRHARGLRSE
Trigger: TTCACTTCTCAGACCGCGGGCATGCCGAGATGGCCATCGCACTCTGGAACAACATGGAGAGCCCTTACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436775.1
CDS CAA 72 bp TTCCCAGTGCCAACAGAGAAGCCCTTCAGGGAAGGGTaGAATTCCCGGAGGATGTTCGCCAGGGTGGTAACG +
Preference number: 6 (lower is better)
Translates to: FPVPTEKPFREG*NSRRMFARVVT
Trigger: CGTTACCACCCTGGCGAACATCCTCCGGGAATTCAACCCTTCCCTGAAGGGCTTCTCTGTTGGCACTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000485642.1
CDS CAA 72 bp TCCAAGTGGTTCAAGCTGGCCTGCTGCACTGGGCACTaGTCTGGGTTTCCCAGGAACACCTGCCGCATGATA +
Preference number: 6 (lower is better)
Translates to: SKWFKLACCTGH*SGFPRNTCRMI
Trigger: TATCATGCGGCAGGTGTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGCTTGAACCACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411743.5
ENST00000479065.5
CDS TCA 72 bp CTCCTGCACTGTATGACAGTCCCCGATACTGTGTGGTaGCATCGGGGAGGTCGTCTGGTTTGGAGCCAATTC +
Preference number: 6 (lower is better)
Translates to: LLHCMTVPDTVW*HRGGRLVWSQF
Trigger: GAATTGGCTCCAAACCAGACGACCTCCCCGATGTCACCACACAGTATCGGGGACTGTCATACAGTGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS CCA 72 bp TTCAGTCCAGTCTTGCTTCTCCAGATCGCCCGTCCCTaGGTCTGGAGGAATTTCCAGATTGCCAATGGCTGC +
Preference number: 6 (lower is better)
Translates to: FSPVLLLQIARP*VWRNFQIANGC
Trigger: GCAGCCATTGGCAATCTGGAAATTCCTCCAGACCCAGGGACGGGCGATCTGGAGAAGCAAGACTGGACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS CCA 72 bp TGGGTGGGACACAGGAGTTCTGGGGCTTTTCAGGGCTaGCTGACTTCCCTTCTTGCAGATAACCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: WVGHRSSGAFQG*LTSLLADNLLF
Trigger: GAAGAGGAGGTTATCTGCAAGAAGGGAAGTCAGCCAGCCCTGAAAAGCCCCAGAACTCCTGTGTCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473272.1
CDS CAA 72 bp CGATACTGTGTGGTGACATCGGGGAGGTCGTCTGGTTaGGAGCCAATTCCATTGCCAGCGGTCAGAGAATCC +
Preference number: 6 (lower is better)
Translates to: RYCVVTSGRSSG*EPIPLPAVRES
Trigger: GGATTCTCTGACCGCTGGCAATGGAATTGGCTCCAAACCAGACGACCTCCCCGATGTCACCACACAGTATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
CDS CAA 72 bp CAGTTACACAAAACGCTGGCCTGCTGCACTGGGCACTaGTCTGGGTTTCCCAGGAACACCTGCCGCATGATA +
Preference number: 6 (lower is better)
Translates to: QLHKTLACCTGH*SGFPRNTCRMI
Trigger: TATCATGCGGCAGGTGTTCCTGGGAAACCCAGACAAGTGCCCAGTGCAGCAGGCCAGCGTTTTGTGTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS TCA 72 bp CCTTCCAATGTACTCTTTCTAGGAGAGGTATGGATCTaGGGGGTCCAGTTCTGCGTGGCTGGAGAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: PSNVLFLGEVWI*GVQFCVAGEAS
Trigger: TGAGGCCTCTCCAGCCACGCAGAACTGGACCCCTCAGATCCATACCTCTCCTAGAAAGAGTACATTGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416713.5
CDS TCA 72 bp TCCGCCGACGCTGTAACGTGGGTCCAAGAAAGAAAATaGAGGGTTAAAATCCCAGCCACGCCGAGACCCTTC +
Preference number: 6 (lower is better)
Translates to: SADAVTWVQERK*RVKIPATPRPF
Trigger: GAAGGGTCTCGGCGTGGCTGGGATTTTAACCCTTCATTTTCTTTCTTGGACCCACGTTACAGCGTCGGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485642.1
CDS GCA 72 bp GCTGAGCCAAGTGCCGTGATACTGACGAGAGACCTCTaGAACCTCAGAGAGGTCCACCAGGTTTACAAATGC +
Preference number: 6 (lower is better)
Translates to: AEPSAVILTRDL*NLREVHQVYKC
Trigger: GCATTTGTAAACCTGGTGGACCTCTCTGAGGTTGCAGAGGTCTCTCGTCAGTATCACGGCACTTGGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS GCA 72 bp AACAGGCTCCAGCATATTGTTCCAGAGAGCACTGGCTaGTCGGGAGTGAGACTTGCTGCTGAAGTGGAAACA +
Preference number: 6 (lower is better)
Translates to: NRLQHIVPESTG*SGVRLAAEVET
Trigger: TGTTTCCACTTCAGCAGCAAGTCTCACTCCCGAGCAGCCAGTGCTCTCTGGAACAATATGCTGGAGCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000481449.1
CDS GCA 72 bp CTCTGGGCACCTCTCTATGCAGGACGTCCAAGGCATTaGGGAGATGGTGAACAAAGTTGGCTGCAGAATACA +
Preference number: 6 (lower is better)
Translates to: LWAPLYAGRPRH*GDGEQSWLQNT
Trigger: TGTATTCTGCAGCCAACTTTGTTCACCATCTCCGCAATGCCTTGGACGTCCTGCATAGAGAGGTGCCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000479065.5
CDS CAA 90 bp TTGGACTTGGCTCATAAGATCCTCAGCCTTTGCTCCGGGAACAGCTaGATTGAGGAATGCATTCGTGTCATTGGCATCACCCGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: LDLAHKILSLCSGNS*IEECIRVIGITRAH
Trigger: GTGGGCACGGGTGATGCCAATGACACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTTATGAGCCAAGTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS TCA 72 bp CCTGAATCCACAAGTCTTCAGCACCATCGTGGGGTATaGCTCTCTTTCCAGTGTGGCACACAGGCATTGGAA +
Preference number: 6 (lower is better)
Translates to: PESTSLQHHRGV*LSFQCGTQALE
Trigger: TTCCAATGCCTGTGTGCCACACTGGAAAGAGAGTCATACCCCACGATGGTGCTGAAGACTTGTGGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS TCA 72 bp TCTGCAGTCTGGTCAGGTAGTTGCTGTTTCTGTAGCTaGACAGATAGGGGCTCTCCTGAGAGGGACACTTCA +
Preference number: 6 (lower is better)
Translates to: SAVWSGSCCFCS*TDRGSPERDTS
Trigger: TGAAGTGTCCCTCTCAGGAGAGCCCCTATCTGTTCAGCTACAGAAACAGCAACTACCTGACCAGACTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
CDS TCA 72 bp TACTTTCTCTGTATGACAGTCCCCGATACTGTGTGGTaGCATCGGGGAGGTCGTCTGGTTTGGAGCCAATTC +
Preference number: 6 (lower is better)
Translates to: YFLCMTVPDTVW*HRGGRLVWSQF
Trigger: GAATTGGCTCCAAACCAGACGACCTCCCCGATGTCACCACACAGTATCGGGGACTGTCATACAGAGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS GCA 72 bp TGGGCATCTCTGCTCTCAGGTCCAGGGTCTCTGTTTTaGTTCCAAGTGGTTCAAGCATATTGGTCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: WASLLSGPGSLF*FQVVQAYWSKG
Trigger: CCCTTTGGACCAATATGCTTGAACCACTTGGAAGCAAAACAGAGACCCTGGACCTGAGAGCAGAGATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS TCA 72 bp TGGGAACCGTATCGGAGGGGTCTTTGTCAGGACATCTaGTTTCCGCTCCTTCTCTTACCTCAAGCTTGTCTT +
Preference number: 6 (lower is better)
Translates to: WEPYRRGLCQDI*FPLLLLPQACL
Trigger: AAGACAAGCTTGAGGTAAGAGAAGGAGCGGAAATCAGATGTCCTGACAAAGACCCCTCCGATACGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
CDS TCA 72 bp CATGGAGGATGTCCAGGGCCTTTCCAATGTTGTCTGTaGAGTTCTGGGGAGAATAGTGGACCAGATCATTGC +
Preference number: 6 (lower is better)
Translates to: HGGCPGPFQCCL*SSGENSGPDHC
Trigger: GCAATGATCTGGTCCACTATTCTCCCCAGAACTTCACAGACAACATTGGAAAGGCCCTGGACATCCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327757.10
ENST00000436544.1
CDS TCA 72 bp CTCATAAGATCCTCAGCCTTTGCTCCGGGAACAGCTTaGTTGAGGAATGCATTCGTGTCATTGGCATCACCC +
Preference number: 6 (lower is better)
Translates to: LIRSSAFAPGTA*LRNAFVSLASP
Trigger: GGGTGATGCCAATGACACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS GCA 72 bp TGCCTGTTGAGCAGAGGGGCACAGGTAACACTGGCTTaGATTACTGAAGAACACATTGATGAGCTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: CLLSRGAQVTLA*ITEEHIDELPV
Trigger: GACTGGAAGCTCATCAATGTGTTCTTCAGTAATGCAAGCCAGTGTTACCTGTGCCCCTCTGCTCAACAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS CCA 72 bp TTCCAAGTGGTTCAAGCATATTGGTCCAAAGGGCTCTaGCCAGCTGGGAGTGGAATTTCTGATTTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: FQVVQAYWSKGL*PAGSGISDLGG
Trigger: TCCACCCAAATCAGAAATTCCACTCCCAGCTGGCCAGAGCCCTTTGGACCAATATGCTTGAACCACTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000444257.5
CDS CAA 72 bp GCTCATAAGATCCTCAGCCTTTGCTCCGGGAACAGCTaGATTGAGGAATGCATTCGTGTCATTGGCATCACC +
Preference number: 6 (lower is better)
Translates to: AHKILSLCSGNS*IEECIRVIGIT
Trigger: GGTGATGCCAATGACACGAATGCATTCCTCAATCAAGCTGTTCCCGGAGCAAAGGCTGAGGATCTTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS CCA 72 bp TCAGCACCATCGTGGGGTATGACTCTCTTTCCAGTGTaGCACACAGGCATTGGAACAGAAGGACTGAAATAT +
Preference number: 6 (lower is better)
Translates to: SAPSWGMTLFPV*HTGIGTEGLKY
Trigger: ATATTTCAGTCCTTCTGTTCCAATGCCTGTGTGCCACACTGGAAAGAGAGTCATACCCCACGATGGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS CCA 72 bp GGACGTCCAAGGCATTGCGGAGATGGTGAACAAAGTTaGCTGCAGAATACAGATTCGAATCTGTGCAGTAGT +
Preference number: 6 (lower is better)
Translates to: GRPRHCGDGEQS*LQNTDSNLCSS
Trigger: ACTACTGCACAGATTCGAATCTGTATTCTGCAGCCAACTTTGTTCACCATCTCCGCAATGCCTTGGACGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS TCA 72 bp TCTCTATGCAGGACGTCCAAGGCATTGCGGAGATGGTaGACAAAGTTGGCTGCAGAATACAGATTCGAATCT +
Preference number: 6 (lower is better)
Translates to: SLCRTSKALRRW*TKLAAEYRFES
Trigger: AGATTCGAATCTGTATTCTGCAGCCAACTTTGTTCACCATCTCCGCAATGCCTTGGACGTCCTGCATAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS GCA 72 bp CCCTGGGTCTGGAGGAATTTCCAGATTGCCAATGGCTaGCACAAATTTAATATCAGAAGGCTTCAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: PWVWRNFQIANG*HKFNIRRLQRV
Trigger: CACTCTCTGAAGCCTTCTGATATTAAATTTGTGGCAGCCATTGGCAATCTGGAAATTCCTCCAGACCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS GCA 72 bp ATTCTGTTGAGCAGAGGGGCACAGGTAACACTGGCTTaGATTACTGAAGAACACATTGATGAGCTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: ILLSRGAQVTLA*ITEEHIDELPV
Trigger: GACTGGAAGCTCATCAATGTGTTCTTCAGTAATGCAAGCCAGTGTTACCTGTGCCCCTCTGCTCAACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327757.10
CDS GCA 72 bp GTCCAAGGCATTGCGGAGATGGTGAACAAAGTTGGCTaGAGAATACAGATTCGAATCTGTGCAGTAGTCACA +
Preference number: 6 (lower is better)
Translates to: VQGIAEMVNKVG*RIQIRICAVVT
Trigger: TGTGACTACTGCACAGATTCGAATCTGTATTCTGCAGCCAACTTTGTTCACCATCTCCGCAATGCCTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS CAA 90 bp TTGAAAGTCAAGTTGCAGGTTCTCTTTCATGTTTCTCACCAGTTCTaGAGCCTGAATCCACAAGTCTTCAGCACCATCGTGGGGTATGAC +
Preference number: 6 (lower is better)
Translates to: LKVKLQVLFHVSHQF*SLNPQVFSTIVGYD
Trigger: GTCATACCCCACGATGGTGCTGAAGACTTGTGGATTCAGGCTCAAGAACTGGTGAGAAACATGAAAGAGAACCTGCAACTTGACTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS CAA 72 bp AAGTTGCAGGTTCTCTTTCATGTTTCTCACCAGTTCTaGAGCCTGAATCCACAAGTCTTCAGCACCATCGTG +
Preference number: 6 (lower is better)
Translates to: KLQVLFHVSHQF*SLNPQVFSTIV
Trigger: CACGATGGTGCTGAAGACTTGTGGATTCAGGCTCAAGAACTGGTGAGAAACATGAAAGAGAACCTGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6
CDS CAA 72 bp ATGATCATCTTTCATCTTCTGCATCAGAGTTTGGACTaGGCTCATAAGATCCTCAGCCTTTGCTCCGGGAAC +
Preference number: 6 (lower is better)
Translates to: MIIFHLLHQSLD*AHKILSLCSGN
Trigger: GTTCCCGGAGCAAAGGCTGAGGATCTTATGAGCCAAGTCCAAACTCTGATGCAGAAGATGAAAGATGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
CDS CAA 72 bp GGATTTGGTGCTTTTCTGGTGCATTTCCTGTTGGATTaGCTGACCCAGGAGTCTGATAAGAACCCTGGTTTA +
Preference number: 6 (lower is better)
Translates to: GFGAFLVHFLLD*LTQESDKNPGL
Trigger: TAAACCAGGGTTCTTATCAGACTCCTGGGTCAGCAAATCCAACAGGAAATGCACCAGAAAAGCACCAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS TCA 72 bp TTGGTGCTTTTCTGGTGCATTTCCTGTTGGATTTGCTaGCCCAGGAGTCTGATAAGAACCCTGGTTTACTTT +
Preference number: 6 (lower is better)
Translates to: LVLFWCISCWIC*PRSLIRTLVYF
Trigger: AAAGTAAACCAGGGTTCTTATCAGACTCCTGGGTCAGCAAATCCAACAGGAAATGCACCAGAAAAGCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436544.1
CDS TCA 72 bp AACCCTCATCCCACCAAGATCACCATCCTGAATAAGTaGTGCAGAAACGCTGGCTTGAGACTCAATACATTT +
Preference number: 6 (lower is better)
Translates to: NPHPTKITILNK*CRNAGLRLNTF
Trigger: AAATGTATTGAGTCTCAAGCCAGCGTTTCTGCATCACTTATTCAGGATGGTGATCTTGGTGGGATGAGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481449.1
CDS GCA 72 bp GAGGTCTTTGGCATGTCCACGTTTTCAAAGAACGGCTaGACAACCACAGTAAAATCTTCCCTTGTGTCATAT +
Preference number: 6 (lower is better)
Translates to: EVFGMSTFSKNG*TTTVKSSLVSY
Trigger: ATATGACACAAGGGAAGATTTTACTGTGGTTGTGCAGCCGTTCTTTGAAAACGTGGACATGCCAAAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000481449.1
CDS CAA 72 bp ATCTTCCCTTGTGTCATATCGCCCACTCTCAATCAGTaGGTGGGTCTTCTCCTGAAACTTCTTGTTGAATTC +
Preference number: 6 (lower is better)
Translates to: IFPCVISPTLNQ*VGLLLKLLVEF
Trigger: GAATTCAACAAGAAGTTTCAGGAGAAGACCCACCAACTGATTGAGAGTGGGCGATATGACACAAGGGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000422425.6
ENST00000436544.1
ENST00000481449.1
CDS CAA 72 bp CGAGGAACCAGATCATTGCAGAAATCACAGAGGTCATaGCCGCCTATAAACAGGGTTATTATCTTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: RGTRSLQKSQRS*PPINRVIIFQS
Trigger: AGACTGGAAGATAATAACCCTGTTTATAGGCGGCAATGACCTCTGTGATTTCTGCAATGATCTGGTTCCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404858.5
ENST00000422425.6
CDS CAA 72 bp ATTACTGAAGAACACATTGATGAGCTTCCAGTCAAATaGAAAGTCAAGTTGCAGGTTCTCTTTCATGTTTCT +
Preference number: 6 (lower is better)
Translates to: ITEEHIDELPVK*KVKLQVLFHVS
Trigger: AGAAACATGAAAGAGAACCTGCAACTTGACTTTCAATTTGACTGGAAGCTCATCAATGTGTTCTTCAGTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327757.10
ENST00000404858.5
ENST00000416713.5
ENST00000422425.6