RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLAT (Homo sapiens)

Ensembl gene IDs: ENSG00000104368

Ensembl transcript IDs: ENST00000220809.9, ENST00000352041.7, ENST00000429089.6, ENST00000429710.6, ENST00000519510.5, ENST00000520523.5, ENST00000521042.1, ENST00000521647.1, ENST00000521694.1, ENST00000522812.1, ENST00000524009.5, ENST00000524261.1, ENST00000677722.1, ENST00000678083.1, ENST00000678676.1, ENST00000679151.1, ENST00000679300.1

Found 1177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTGTCTCCAGCACACAGCATGTTGTCG +
Preference number: 1 (lower is better)
Translates to: RGPPESPWQASCKFA*GPPLRVSPAHSMLS
Trigger: CGACAACATGCTGTGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR GCA 90 bp GCAGCTGCAGGTCCGCCGGGGGAAGGCACACAGTGCGGACCACGCTaGTCTCCTGGGCACAGCGGGACGAATCCGATTTCAGCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: AAAGPPGEGTQCGPR*SPGHSGTNPISAAA
Trigger: TGCTGCAGCTGAAATCGGATTCGTCCCGCTGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCTGCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR CCA 90 bp AGGTCCGCCGGGGGAAGGCACACAGTGCGGACCACGCTGCTCTCCTaGGCACAGCGGGACGAATCCGATTTCAGCTGCAGCAGCGCAATG +
Preference number: 1 (lower is better)
Translates to: RSAGGRHTVRTTLLS*AQRDESDFSCSSAM
Trigger: CATTGCGCTGCTGCAGCTGAAATCGGATTCGTCCCGCTGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR TCA 90 bp GGGTGGGAGGCGATGTCGGCGAAGAGCCCTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTCAGGCCGCAGGTGGAGCAGGAGGGC +
Preference number: 1 (lower is better)
Translates to: GWEAMSAKSPPLMRN*GWLYCLRPQVEQEG
Trigger: GCCCTCCTGCTCCACCTGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGCCTCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR GCA 90 bp CGCAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGCACCAGGGCTTGGCATCCCCATCAG +
Preference number: 1 (lower is better)
Translates to: RRWSRRAHHSTPTSA*GSSARGTRAWHPHQ
Trigger: CTGATGGGGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR TCA 90 bp TCAGGATCATGGAATTCCACGGGAGGCAGGAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGTAGGCTGACCCATTCCCAAAGTAGC +
Preference number: 1 (lower is better)
Translates to: SGSWNSTGGRRHPTR*GCACHGRLTHSQSS
Trigger: GCTACTTTGGGAATGGGTCAGCCTACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCTCCTGCCTCCCGTGGAATTCCATGATCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR GCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCC +
Preference number: 1 (lower is better)
Translates to: GKMHSSLSCRVSSRF*GVVGLEKSVEKHCA
Trigger: GGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR GCA 90 bp CTTCAAATTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGTGGTGGGGCGGAAACCTCTCCTGGA +
Preference number: 1 (lower is better)
Translates to: LQISAPPRQGPPGMF*PRSPSGGGAETSPG
Trigger: TCCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR GCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCAT +
Preference number: 1 (lower is better)
Translates to: RFCGVVGLEKSVEKH*AFAVSSEEEEAGSH
Trigger: ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CCA 90 bp TCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATACCTCCATaGAGAGTGCCTTTTCCACACCTGTCCACAGTCCACGTCTCACCC +
Preference number: 1 (lower is better)
Translates to: SLYSPLLALYIFIPP*RVPFPHLSTVHVSP
Trigger: GGGTGAGACGTGGACTGTGGACAGGTGTGGAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR GCA 90 bp TTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATAT +
Preference number: 1 (lower is better)
Translates to: LTSRVLLRNMTGQPA*PNFEALLGSCDYKY
Trigger: ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR GCA 90 bp ACTCCCCTCTCTTGGCCCTCTACATATTCATACCTCCATGGAGAGTaGCTTTTCCACACCTGTCCACAGTCCACGTCTCACCCAGTTATT +
Preference number: 1 (lower is better)
Translates to: TPLSWPSTYSYLHGE*LFHTCPQSTSHPVI
Trigger: AATAACTGGGTGAGACGTGGACTGTGGACAGGTGTGGAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR TCA 90 bp TCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGT +
Preference number: 1 (lower is better)
Translates to: SGEVCREALRLCSVF*RRRGGISFAFEESG
Trigger: ACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR TCA 90 bp TTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGGTCACGGTCGCATGTTGTCACGAAT +
Preference number: 1 (lower is better)
Translates to: LQCLLKKKRRDLICF*GVGCSWSRSHVVTN
Trigger: ATTCGTGACAACATGCGACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR GCA 90 bp AGCATTCCTGTCCCTCCTTTTCCCGGTCTGGAGCACCTAGCCCATTaGCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAG +
Preference number: 1 (lower is better)
Translates to: SIPVPPFPGLEHLAH*LVCYRCCVYVKRVK
Trigger: CTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCAATGGGCTAGGTGCTCCAGACCGGGAAAAGGAGGGACAGGAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR GCA 90 bp TGCCCTTTTGTGACCGGCTCCACTGTACCTTGGTACTTCTCTAAATaGCATATTAGCCCATCAGACCAAGCATTCCTGTCCCTCCTTTTC +
Preference number: 1 (lower is better)
Translates to: CPFVTGSTVPWYFSK*HISPSDQAFLSLLF
Trigger: GAAAAGGAGGGACAGGAATGCTTGGTCTGATGGGCTAATATGGCATTTAGAGAAGTACCAAGGTACAGTGGAGCCGGTCACAAAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR CCA 90 bp CACTTCAGACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTaGCCCTCTACATATTCATACCTCCATGGAGAGTGCCTTTTCCAC +
Preference number: 1 (lower is better)
Translates to: HFRQAQLISPCTPLS*PSTYSYLHGECLFH
Trigger: GTGGAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGTCTGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR TCA 90 bp GGAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAA +
Preference number: 1 (lower is better)
Translates to: GGIPGEASVHSCLPI*QSILKSDQVLKTSK
Trigger: TTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR GCA 90 bp TCATCGAATTCCTTATGGACAATGTATTTTTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATC +
Preference number: 1 (lower is better)
Translates to: SSNSLWTMYFSTSNF*SSSPGTTRYVLPKI
Trigger: GATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGAAAAATACATTGTCCATAAGGAATTCGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR TCA 90 bp CCAATCCCTCTTGCAACTGAATTCTACTACAAGTCTGCCCTTTTGTaGCCGGCTCCACTGTACCTTGGTACTTCTCTAAATGCCATATTA +
Preference number: 1 (lower is better)
Translates to: PIPLATEFYYKSALL*PAPLYLGTSLNAIL
Trigger: TAATATGGCATTTAGAGAAGTACCAAGGTACAGTGGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGAATTCAGTTGCAAGAGGGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR-3UTR CCA 90 bp TCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGCTCCGAGTGTCTCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: SPWQASCKFAWGPPLRVSPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...AGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp GAGTATGCCCCCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 2 (lower is better)
Translates to: EYAPAQEPLSGRPPVLGKAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...TTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGGGGGCATACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR GCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATACCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: RASQPAPTLRPCWALVTIPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp CAGGGGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: QGASRIALAGVVQVCLGPENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...GGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp GGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 2 (lower is better)
Translates to: GADEYAPAQEPLSGRPPVVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...CACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp CTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 2 (lower is better)
Translates to: LLLLARDHPVCSAQDHRQAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...CTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR GCA 90 bp CTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 2 (lower is better)
Translates to: LLARDHPVCSAQDHRQVVPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...CACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp GGAGAGCTCACACTCCGTCCAGTCCGGCAGCTGCAGGTCCGCCGGGGGAAGGCATGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GELTLRPVRQLQVRRGKACLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...TGCCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGACGGAGTGTGAGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR GCA 90 bp CAGGGGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 2 (lower is better)
Translates to: QGASRIALAGVVQVCLGPESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...GGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR TCA 90 bp AGAATCCAGCAGGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTCCGGGCCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: RIQQELMSMPPHRNRSPGRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...GCCCGGAGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCCTGCTGGATTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR GCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp GGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: GPPESPWQASCKFAWGPPKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...CGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR GCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: ASQPAPTLRPCWALVTINTGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 2 (lower is better)
Translates to: FCSSSPGTTRYVLPKITVTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...GACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR CCA 90 bp CACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGGGCGGAAACCTCTCTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: HPVCSAQDHRQVVGRKPLCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...GAGAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp CAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTCTTCCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 2 (lower is better)
Translates to: QVEQEGTSQYSHVSLRFFRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...GAAGAACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR CCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 2 (lower is better)
Translates to: RCGGSGEVCREALRLCSVSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR GCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 2 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CCA 90 bp TTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: FLLLLARDHPVCSAQDHRATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...ACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp GCAGAGAGAATCCAGCAGGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: AERIQQELMSMPPHRNRSATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...AGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCCTGCTGGATTCTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR TCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 2 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 2 (lower is better)
Translates to: RCGGSGEVCREALRLCSVQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp TGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 2 (lower is better)
Translates to: CSSSPGTTRYVLPKITVRPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...CCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: RASQPAPTLRPCWALVTIDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLEDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp GAGAATCCAGCAGGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTCCGGGCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 2 (lower is better)
Translates to: ENPAGADEYAPAQEPLSGLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...CCCGGAGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCCTGCTGGATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR TCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp AAATTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 2 (lower is better)
Translates to: KFLLLLARDHPVCSAQDHGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...GTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR CCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CCA 90 bp CCGAATAGAAAGGAGACAAGGCCTCATGCTTGCCGTAGCCGGAGAGCTCACACTATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PNRKETRPHACRSRRAHTITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...AGTGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR CCA 90 bp TTGGTAACCTTGGTGTACACACCCGGGACATCCTTCTGTCCACAGCCCAGGCCCTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 2 (lower is better)
Translates to: LVTLVYTPGTSFCPQPRPCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...GGGCCTGGGCTGTGGACAGAAGGATGTCCCGGGTGTGTACACCAAGGTTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR TCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 2 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 2 (lower is better)
Translates to: TGQPACPNFEALLGSCDYLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CAA 90 bp TTTGCCTGGGGCCCGCCGCTCCGAGTGTCTCCAGCACACAGCATGTaGTCGGTGACTGTTCTGTTAAGTAAATGTTGTGATGTGCAGCGG +
Preference number: 2 (lower is better)
Translates to: FAWGPPLRVSPAHSM*SVTVLLSKCCDVQR
Trigger: CCGCTGCACATCACAACATTTACTTAACAGAACAGTCACCGACAACATGCTGTGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR TCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: LVPLLRCGGSGEVCREALDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 2 (lower is better)
Translates to: GLVPLLRCGGSGEVCREALCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTACTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 2 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTAGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 2 (lower is better)
Translates to: RCGGSGEVCREALRLCSVLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 2 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TTGGTAACCTTGGTGTACACACCCGGGACATCCTTCTGTCCACAGCCCAGGCCCGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 2 (lower is better)
Translates to: LVTLVYTPGTSFCPQPRPESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...GGGCCTGGGCTGTGGACAGAAGGATGTCCCGGGTGTGTACACCAAGGTTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR CCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTACCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: RCGGSGEVCREALRLCSVSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 2 (lower is better)
Translates to: SRVLLRNMTGQPACPNFESVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 2 (lower is better)
Translates to: SRVLLRNMTGQPACPNFELERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp ACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 2 (lower is better)
Translates to: TSSTHFSLYSPLLALYIFGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...GAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR-3UTR CCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: TGQPACPNFEALLGSCDYKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CAA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTGTTCCTGGTCACGGTCGCATGTTGT +
Preference number: 2 (lower is better)
Translates to: CAFAVSSEEEEAGSH*LLRSRVFLVTVACC
Trigger: ACAACATGCGACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR TCA 90 bp GACATGAGCCTCCTTCAGCCGCTCCGAATAGAAAGGAGACAAGGCCTCATGCTTCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 2 (lower is better)
Translates to: DMSLLQPLRIERRQGLMLLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...AAGCATGAGGCCTTGTCTCCTTTCTATTCGGAGCGGCTGAAGGAGGCTCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR TCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 2 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 2 (lower is better)
Translates to: SGGWALAENRVAWPLSAQLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAACGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR GCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: GWALAENRVAWPLSAQGGKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TCGACTTCAAATTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 2 (lower is better)
Translates to: STSNFCSSSPGTTRYVLPVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...GGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR-3UTR CCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CAA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTGGTCACGGTCGCATGTTGTCACGAA +
Preference number: 2 (lower is better)
Translates to: FAVSSEEEEAGSHLL*RSRVFLVTVACCHE
Trigger: TTCGTGACAACATGCGACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR TCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTAGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 2 (lower is better)
Translates to: SGGWALAENRVAWPLSAQKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAACCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 2 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR TCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 2 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CCA 90 bp TGCCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAGCAGAATTCCCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: CLVCYRCCVYVKRVKQNSPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...GGAATTCTGCTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR CAA 90 bp TCACTTCAGACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTaGGCCCTCTACATATTCATACCTCCATGGAGAGTGCCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: SLQTSSTHFSLYSPL*ALYIFIPPWRVPFP
Trigger: TGGAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGTCTGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR-3UTR TCA 90 bp CTAGCCCATTGCCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAGAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: LAHCLVCYRCCVYVKRVKRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...CTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCAATGGGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR-3UTR CCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: QPACPNFEALLGSCDYKYKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CCA 90 bp ACTCCCCTCTCTTGGCCCTCTACATATTCATACCTCCATGGAGAGTGCCTTTTCGGCTCCACTGTACCTTaGTACTTCTCTAAATGCCAT +
Preference number: 2 (lower is better)
Translates to: TPLSWPSTYSYLHGECLFGSTVP*YFSKCH
Trigger: ATGGCATTTAGAGAAGTACCAAGGTACAGTGGAGCC...GAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR-3UTR TCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 2 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR GCA 90 bp GACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTTGGTACTTCTCTAAATaGCATATTAGCCCATCAGAC +
Preference number: 2 (lower is better)
Translates to: DKLNSFLPVLPSLGPLHIWYFSK*HISPSD
Trigger: GTCTGATGGGCTAATATGGCATTTAGAGAAGTACCA...AATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR GCA 72 bp CCGGCAGCTGCAGGTCCGCCGGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCTGGGCACAGCGGGACG +
Preference number: 3 (lower is better)
Translates to: PAAAGPPGEGTQ*GPRCSPGHSGT
Trigger: CGTCCCGCTGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCTGCAGCTGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR GCA 72 bp GCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCGAGTGTCTCCAGCACA +
Preference number: 3 (lower is better)
Translates to: ASRIALAGVVQV*LGPAAPSVSST
Trigger: TGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR CCA 72 bp CCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTGTCTCCAGCACACAGC +
Preference number: 3 (lower is better)
Translates to: PESPWQASCKFA*GPPLRVSPAHS
Trigger: GCTGTGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR TCA 72 bp TGGAATTCCACGGGAGGCAGGAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGTAGGCTGACCCATTCC +
Preference number: 3 (lower is better)
Translates to: WNSTGGRRHPTR*GCACHGRLTHS
Trigger: GGAATGGGTCAGCCTACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCTCCTGCCTCCCGTGGAATTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR CCA 72 bp GGGGGAAGGCACACAGTGCGGACCACGCTGCTCTCCTaGGCACAGCGGGACGAATCCGATTTCAGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: GGRHTVRTTLLS*AQRDESDFSCS
Trigger: GCTGCAGCTGAAATCGGATTCGTCCCGCTGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR GCA 72 bp TCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGTGGTGGGGCGGAAACC +
Preference number: 3 (lower is better)
Translates to: SAPPRQGPPGMF*PRSPSGGGAET
Trigger: GGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CAA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATACAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 3 (lower is better)
Translates to: RASQPAPTLRPCWALVTIQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp CCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: PPRQGPPGMFCPRSPSGGGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...ACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CAA 90 bp CAGGTCCGCCGGGGGAAGGCACACAGTGCGGACCACGCTGCTCTCCTGGGCACAGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: QVRRGKAHSADHAALLGTGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...TGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR CCA 72 bp CTCCTGTGCTTGGCAAAGATGGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAGAGCCCTCCTTTGATG +
Preference number: 3 (lower is better)
Translates to: LLCLAKMAACQG*EAMSAKSPPLM
Trigger: CATCAAAGGAGGGCTCTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR CCA 72 bp ACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCCTGGAAGCAGTGGGCG +
Preference number: 3 (lower is better)
Translates to: TTRYVLPKITVR*WGGNLSWKQWA
Trigger: CGCCCACTGCTTCCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR-3UTR CAA 90 bp ACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGGGCGGAAACCTCTCCACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 3 (lower is better)
Translates to: TRYVLPKITVRWWGGNLSTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678676.1
3UTR TCA 72 bp GCGATGTCGGCGAAGAGCCCTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTCAGGCCGCAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: AMSAKSPPLMRN*GWLYCLRPQVE
Trigger: CTCCACCTGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR TCA 72 bp AGGGGTGGGAGGCGATGTCGGCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGCTGTACTGTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: RGGRRCRRRALL*CETEAGCTVSG
Trigger: GCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGCCTCCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
3UTR GCA 72 bp AGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGAC +
Preference number: 3 (lower is better)
Translates to: RVLLRNMTGQPA*PNFEALLGSCD
Trigger: GTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR GCA 72 bp GCCGCTCCGAATAGAAAGGAGACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCACACTCCGTCCAGTCCG +
Preference number: 3 (lower is better)
Translates to: AAPNRKETRPHA*RSRRAHTPSSP
Trigger: CGGACTGGACGGAGTGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATTCGGAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR CAA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: TGQPACPNFEALLGSCDYEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 3 (lower is better)
Translates to: ASQPAPTLRPCWALVTINQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: KTGWHGHFLPREEAFLEREAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: RASQPAPTLRPCWALVTIRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 3 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR GCA 72 bp CACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAG +
Preference number: 3 (lower is better)
Translates to: HSSLSCRVSSRF*GVVGLEKSVEK
Trigger: CTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CCA 72 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGA +
Preference number: 3 (lower is better)
Translates to: SGGWALAENRVA*PLSAQGGGIPG
Trigger: TCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp AGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: RLDVKGAFEEHDGPASLPKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...GGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: DRSGGWALAENRVAWPLSEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: ASQPAPTLRPCWALVTINKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp CTCCGAATAGAAAGGAGACAAGGCCTCATGCTTGCCGTAGCCGGAGAGCTCACAAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 3 (lower is better)
Translates to: LRIERRQGLMLAVAGELTRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...TGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR TCA 72 bp AATGTTGTGATGTGCAGCGGCTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCCGCTCCGAATAGAAAG +
Preference number: 3 (lower is better)
Translates to: NVVMCSGWMGTV*HEPPSAAPNRK
Trigger: CTTTCTATTCGGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCAGCCGCTGCACATCACAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR CCA 72 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTaGGCTCTTGTGACTATAAATATACTGTCTATTTCT +
Preference number: 3 (lower is better)
Translates to: RASQPAPTLRPC*ALVTINILSIS
Trigger: AGAAATAGACAGTATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: QPACPNFEALLGSCDYKYKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR TCA 72 bp CTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGGTCACGGTCGCATGTT +
Preference number: 3 (lower is better)
Translates to: LLKKKRRDLICF*GVGCSWSRSHV
Trigger: AACATGCGACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR GCA 72 bp TCTTGGCCCTCTACATATTCATACCTCCATGGAGAGTaGCTTTTCCACACCTGTCCACAGTCCACGTCTCAC +
Preference number: 3 (lower is better)
Translates to: SWPSTYSYLHGE*LFHTCPQSTSH
Trigger: GTGAGACGTGGACTGTGGACAGGTGTGGAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR CCA 72 bp CAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTaGCCCTCTACATATTCATACCTCCATGGAGAGTGC +
Preference number: 3 (lower is better)
Translates to: QAQLISPCTPLS*PSTYSYLHGEC
Trigger: GCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR-3UTR CAA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp ATGTTGTCGGTGACTGTTCTGTTAAGTAAATGTTGTGATGTGCAGCGGCTGGATGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: MLSVTVLLSKCCDVQRLDEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...ATCCAGCCGCTGCACATCACAACATTTACTTAACAGAACAGTCACCGACAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR-3UTR CAA 90 bp AGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATAGGAGCACCTAGCCCATaGCCTTGTATGTTACAGGTG +
Preference number: 3 (lower is better)
Translates to: SSTHFSLYSPLLALYIFIGAPSP*PCMLQV
Trigger: CACCTGTAACATACAAGGCAATGGGCTAGGTGCTCC...TATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR TCA 72 bp GTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAG +
Preference number: 3 (lower is better)
Translates to: VCREALRLCSVF*RRRGGISFAFE
Trigger: CTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR GCA 72 bp GTCCCTCCTTTTCCCGGTCTGGAGCACCTAGCCCATTaGCTTGTATGTTACAGGTGTTGTGTATATGTTAAG +
Preference number: 3 (lower is better)
Translates to: VPPFPGLEHLAH*LVCYRCCVYVK
Trigger: CTTAACATATACACAACACCTGTAACATACAAGGCAATGGGCTAGGTGCTCCAGACCGGGAAAAGGAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
3UTR-3UTR CAA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 3 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR TCA 72 bp CCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCAGACCAAGTCCTGAAA +
Preference number: 3 (lower is better)
Translates to: PGEASVHSCLPI*QSILKSDQVLK
Trigger: TTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR-3UTR CAA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CAA 72 bp GGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCCGAGTGTCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GLPNRPGRRRAS*PGARRSECLQH
Trigger: GTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GTAGCCGGAGAGCTCACACTCCGTCCAGTCCGGCAGCTGCAGGTCCGCCGGGGGGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VAGELTLRPVRQLQVRRGGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...CCCCCGGCGGACCTGCAGCTGCCGGACTGGACGGAGTGTGAGCTCTCCGGCTAC
69% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSSPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CAGGGGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QGASRIALAGVVQVCLGPGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...GGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GPPESPWQASCKFAWGPPTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...CGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCTGCGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: HRNRSPGDLLCLAKMAACGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp GGAGAGCTCACACTCCGTCCAGTCCGGCAGCTGCAGGTCCGCCGGGGGAAGGCAGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: GELTLRPVRQLQVRRGKAVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...TGCCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGACGGAGTGTGAGCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp GGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GPPESPWQASCKFAWGPPARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...CGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CAGGTCCGCCGGGGGAAGGCACACAGTGCGGACCACGCTGCTCTCCTGGGCACACGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: QVRRGKAHSADHAALLGTRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...TGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGCTCCGAGTGTCTCCAGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PWQASCKFAWGPPLRVSPATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...TGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGGTCGGTGGCCCCGGCTaGGCGGGTTTCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKVGGPG*AGFCVA
Trigger: CGCCACACAGAAACCCGCCCAGCCGGGGCCACCGAC...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CAGGTCCGCCGGGGGAAGGCACACAGTGCGGACCACGCTGCTCTCCTGGGCACAGGGGCGGAAACCTGGTaGAGAAACAGCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QVRRGKAHSADHAALLGTGAETW*RNSLSW
Trigger: CCAGGAGAGGCTGTTTCTCCACCAGGTTTCCGCCCC...TGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR CCA 90 bp GAGCTCACACTCCGTCCAGTCCGGCAGCTGCAGGTCCGCCGGGGGAAGGCACACATCACCGTCAGGTGGTaGGGCGGAAACCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ELTLRPVRQLQVRRGKAHITVRW*GGNLVE
Trigger: CTCCACCAGGTTTCCGCCCCACCACCTGACGGTGAT...GTGTGCCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGACGGAGTGTGAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR TCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVSPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCAGAGAGAATCCAGCAGGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AERIQQELMSMPPHRNRSSPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...AGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCCTGCTGGATTCTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR TCA 90 bp AGGCCCCAGCTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RPQLMMPTKVMRPSFRHTSPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...GGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAGCTGGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLERHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAATCCAGCAGGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTCCGGGAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: ENPAGADEYAPAQEPLSGRHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...CCCGGAGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCCTGCTGGATTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR GCA 90 bp GGTAACCTTGGTGTACACACCCGGGACATCCTTCTGTCCACAGCCCAGGCCCCAGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GNLGVHTRDILLSTAQAPVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...TGGGGCCTGGGCTGTGGACAGAAGGATGTCCCGGGTGTGTACACCAAGGTTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR GCA 90 bp GGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: GPPESPWQASCKFAWGPPCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...CGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGGGCGGAAGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QGPPGMFCPRSPSGGGAEGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...TTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR TCA 90 bp GGAGAGCTCACACTCCGTCCAGTCCGGCAGCTGCAGGTCCGCCGGGGGAAGGCACTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GELTLRPVRQLQVRRGKALAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...TGCCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGACGGAGTGTGAGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp CACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCTGCACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: HRNRSPGDLLCLAKMAACTCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSRHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATACGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: RASQPAPTLRPCWALVTIRHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGCGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLERHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCTGCCAGGGGACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: NRSPGDLLCLAKMAACQGTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...CCCCTGGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ADDAHQSHAAIVQTHQGAPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...GGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CAGGGGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: QGASRIALAGVVQVCLGPCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...GGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKTGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TGQPACPNFEALLGSCDYTGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PHRNRSPGDLLCLAKMAAATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTTTCCAGGCAGGGGGTaGGGTCGGTGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWFPGRG*GRWPRL
Trigger: CAGCCGGGGCCACCGACCCCACCCCCTGCCTGGAAA...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: RASQPAPTLRPCWALVTITCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCGCAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: AAGGAGGHITVLPRQPAVQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...AACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR GCA 90 bp CCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PHRNRSPGDLLCLAKMAAGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR GCA 90 bp CAGGGGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: QGASRIALAGVVQVCLGPGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...GGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCTCAGGCCGCAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SQAAGGAGGHITVLPRQPFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...AGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLEPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: GPPESPWQASCKFAWGPPVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...CGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RLDVKGAFEEHDGPASLPPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...GGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR GCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp GGAGAGCTCACACTCCGTCCAGTCCGGCAGCTGCAGGTCCGCCGGGGGAAGGCACATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: GELTLRPVRQLQVRRGKAHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...TGCCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGACGGAGTGTGAGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GCAGAGAGAATCCAGCAGGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: AERIQQELMSMPPHRNRSQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...AGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCCTGCTGGATTCTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp TCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGCTCCGAGTGTCTTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPWQASCKFAWGPPLRVSCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...AGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATGCCCCCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAATGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EYAPAQEPLSGRPPVLGKCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...TTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGGGGGCATACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CSSSPGTTRYVLPKITVRGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...CCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CCGCAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTCATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQVEQEGTSQYSHVSLRFITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...GAACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCGTCGGTGGCCCCGGCTaGGCGGGTTTCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAVGGPG*AGFCVA
Trigger: CGCCACACAGAAACCCGCCCAGCCGGGGCCACCGAC...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTTTCCAGGCAGGGGGTaGGGTCGGTGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAFPGRG*GRWPRL
Trigger: CAGCCGGGGCCACCGACCCCACCCCCTGCCTGGAAA...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTATGCCCCCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGAACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VCPRTGTALRATSCAWQRTFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...TCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGGGGGCATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR TCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYSPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFERHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSRHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCRHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CCGCAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTCCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PQVEQEGTSQYSHVSLRFRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...GAACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR TCA 90 bp CCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGCTCCGAGTGTCTCCAGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PWQASCKFAWGPPLRVSPDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...TGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp CAGGTCCGCCGGGGGAAGGCACACAGTGCGGACCACGCTGCTCTCCTGGGCACACTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: QVRRGKAHSADHAALLGTLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...TGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GGCGAAGAGCCCTCCTTTGATGCGAAACTGAGGCTGGCTGTACTGTCTCAGGCCCGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GEEPSFDAKLRLAVLSQARHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...GGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREARHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGAATCCAGCAGGAGCTGATGAGTATGCCCCCGCACAGGAACCGCTCTCCGGGCTGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: RIQQELMSMPPHRNRSPGCCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...GCCCGGAGAGCGGTTCCTGTGCGGGGGCATACTCATCAGCTCCTGCTGGATTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLEGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPTGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GCCCCCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: APAQEPLSGRPPVLGKDGGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...GCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGGGCGGAACGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCT +
Preference number: 4 (lower is better)
Translates to: QGPPGMFCPRSPSGGGAERCCSS*CTRRHS
Trigger: AGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCG...TTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCGACTTCAAATTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: STSNFCSSSPGTTRYVLPQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...GGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLERGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGCGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: LLLLARDHPVCSAQDHRQRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...CTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGGGCGGAAACCTCTCGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: HPVCSAQDHRQVVGRKPLVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...GAGAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GAAGAGCCCTCCTTTGATGCGAAACTGAGGCTGGCTGTACTGTCTCAGGCCGCAGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: EEPSFDAKLRLAVLSQAAAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...TGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATATGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RASQPAPTLRPCWALVTICAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FCSSSPGTTRYVLPKITVGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...GACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp AACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCTGCCAGGGGTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: NRSPGDLLCLAKMAACQGCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...CCCCTGGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCATCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREASCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATGCCCCCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAACCAGTGCCTGGGCACTaGGGTTCTGCAGTAGTTGTG +
Preference number: 4 (lower is better)
Translates to: EYAPAQEPLSGRPPVLGKPVPGH*GSAVVV
Trigger: CACAACTACTGCAGAACCCCAGTGCCCAGGCACTGG...TTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGGGGGCATACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521042.1
CDS-3UTR CCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATGGTGGGGCGGAAACCTaGTGGAGAAACAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TGQPACPNFEALLGSCDYGGAET*WRNSLS
Trigger: GGAGAGGCTGTTTCTCCACCAGGTTTCCGCCCCACC...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR TCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLETFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVTCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTGGTGCTGCAGAACTCTaGGCTGTACTTCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSGAAEL*AVLPRL
Trigger: AAGGCGGGGAAGTACAGCTCAGAGTTCTGCAGCACC...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGTAGGATCTCAGCTCTaGGCTCCCCACAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVVGSQL*APHSSG
Trigger: GCCGGAGCTGTGGGGAGCTCAGAGCTGAGATCCTAC...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TGQPACPNFEALLGSCDYGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCTGCGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: HRNRSPGDLLCLAKMAACVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR GCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVRHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATCGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINRHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: CSSSPGTTRYVLPKITVRSGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...CCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTATTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GGCGATGTCGGCGAAGAGCCCTCCTTTGATGCGAAACTGAGGCTGGCTGTACTGCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GDVGEEPSFDAKLRLAVLPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...CAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCCCCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCGCAGTCACTGTTTCCTaGAGTAGTTGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: APAQEPLSGRPPVLGKDGAVTVS*SSCGSP
Trigger: TGGGGAACCACAACTACTGCAGGAAACAGTGACTGC...GCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR GCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAATTCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQFWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGAA...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR CCA 90 bp TTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: FCSSSPGTTRYVLPKITVRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...GACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AATAGAAAGGAGACAAGGCCTCATGCTTGCCGTAGCCGGAGAGCTCACACTCCGGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: NRKETRPHACRSRRAHTPAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...CGGAGTGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: TGQPACPNFEALLGSCDYGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTCTTCAGCACGTGGCACCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: EGTSQYSHVSLRFFSTWHPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...GTGCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGGGCGGGTTTCTGTGTaGCGGGAGGATGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWGRVSV*REDAQW
Trigger: CCACTGAGCATCCTCCCGCCACACAGAAACCCGCCC...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGTCGGTGGCCCCGGCTaGGCGGGTTTCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQVGGPG*AGFCVA
Trigger: CGCCACACAGAAACCCGCCCAGCCGGGGCCACCGAC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFTCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRSPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSRHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCTGCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: AQEPLSGRPPVLGKDGSLPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...CAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR TCA 90 bp GGTAACCTTGGTGTACACACCCGGGACATCCTTCTGTCCACAGCCCAGGCCCCACGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GNLGVHTRDILLSTAQAPRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...TGGGGCCTGGGCTGTGGACAGAAGGATGTCCCGGGTGTGTACACCAAGGTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCGTAGGATCTCAGCTCTaGGCTCCCCACAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCVGSQL*APHSSG
Trigger: GCCGGAGCTGTGGGGAGCTCAGAGCTGAGATCCTAC...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCGTAGGATCTCAGCTCTaGGCTCCCCACAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASVGSQL*APHSSG
Trigger: GCCGGAGCTGTGGGGAGCTCAGAGCTGAGATCCTAC...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGTGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERCCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCATGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREACCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAATGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQCCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: PHRNRSPGDLLCLAKMAAGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR GCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAAGAGCCCTCCTTTGATGCGAAACTGAGGCTGGCTGTACTGTCTCAGGCCGCATTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EEPSFDAKLRLAVLSQAAFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...TGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PPRQGPPGMFCPRSPSGGPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...ACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR GCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGCTCCCTCCCACGGCTTaGTCCTTCCCTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWLPPTA*SFPFLA
Trigger: TGCGAGGAAAGGGAAGGAGCAAGCCGTGGGAGGGAG...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS-3UTR CCA 90 bp GCCGCAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: AAGGAGGHITVLPRQPAVGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...AACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp AGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCT +
Preference number: 4 (lower is better)
Translates to: RLDVKGAFEEHDGPASLPRCCSS*CTRRHS
Trigger: AGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCG...GGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGTCACGGTCGCATGTTGCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GISFAFEESGVPGHGRMLQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...CAACATGCGACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGGGCGGAAACCTCTCCTGGAAGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: VCSAQDHRQVVGRKPLLEVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...TTCCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCAGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTCTTCAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: QVEQEGTSQYSHVSLRFFKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...GAAGAACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLECAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGGCGGGTTTCTGTGTaGCGGGAGGATGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGGRVSV*REDAQW
Trigger: CCACTGAGCATCCTCCCGCCACACAGAAACCCGCCC...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CAA 72 bp GGGAAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: GKGEGDLTSRVL*RNMTGQPACPN
Trigger: GTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATCACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: TGQPACPNFEALLGSCDYHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALTFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEESPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGTCCCCAGGCCCAGCCTaGTGGCGTCTGGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRSPGPA*WRLASA
Trigger: GGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGA...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGGTGCTGCAGAACTCTaGGCTGTACTTCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQGAAEL*AVLPRL
Trigger: AAGGCGGGGAAGTACAGCTCAGAGTTCTGCAGCACC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHRHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREARRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGCTCCGAGTGTCTCCAGCACACGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: QASCKFAWGPPLRVSPAHEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...GTGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCGCCACTCTCCGCTGTaGTCCACGTGCCCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSRHSPL*STCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTTGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSCCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGATGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGCCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCCCAGCTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: APADDAHQSHAAIVQTHQSGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...CTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPSGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVSGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLESTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTAGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTACTACAAGTCTGCCCTTTTGTGACCGGCTCCACTGTACCTTGGTACTTCTCGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: STTSLPFCDRLHCTLVLLGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...GAGAAGTACCAAGGTACAGTGGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: RLDVKGAFEEHDGPASLPKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...GGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCT +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVRCCSS*CTRRHS
Trigger: AGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCG...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPACAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFECAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGATGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGCCCTCCTTTGATGCGAAACTGAGGCTGGCTGTACTGTCTCAGGCCGCAGGTAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: EPSFDAKLRLAVLSQAAGKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...ACCTGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGACCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAACCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VGLEKSVEKHCAFAVSSEPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...TTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGACCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCTFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASTFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCGGTGCTGCAGAACTCTaGGCTGTACTTCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASGAAEL*AVLPRL
Trigger: AAGGCGGGGAAGTACAGCTCAGAGTTCTGCAGCACC...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGTGCTGCAGAACTCTaGGCTGTACTTCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGGAAEL*AVLPRL
Trigger: AAGGCGGGGAAGTACAGCTCAGAGTTCTGCAGCACC...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVRHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCGACTTCAAATTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: STSNFCSSSPGTTRYVLPRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...GGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR TCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAATGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCATGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCAAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREARLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCAGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLEGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RLDVKGAFEEHDGPASLPPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...GGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR GCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR GCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCCAACTTTGAGGCCCTaGTGGGCTCTTGTGACTATA +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSPTLRP*WALVTI
Trigger: TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGG...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAACACCTTGGCTCGCTaGAACCTTGGTAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLENTLAR*NLGKIW
Trigger: CCAGATCTTACCAAGGTTGCAGCGAGCCAAGGTGTT...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS-3UTR CCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATACGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: RASQPAPTLRPCWALVTIRSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGGGTGGGAGGCGATGTCGGCGAAGAGCCCTCCTTTGATGCGAAACTGAGGCTGCGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: GVGGDVGEEPSFDAKLRLRSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...CAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGCCTCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCT +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQRCCSS*CTRRHS
Trigger: AGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCG...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAATTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCT +
Preference number: 4 (lower is better)
Translates to: KFLLLLARDHPVCSAQDHRCCSS*CTRRHS
Trigger: AGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCG...GTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTAGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FLLLLARDHPVCSAQDHRENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...ACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGTCGGTGGCCCCGGCTaGGCGGGTTTCTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEVGGPG*AGFCVA
Trigger: CGCCACACAGAAACCCGCCCAGCCGGGGCCACCGAC...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAATTTCCAGGCAGGGGGTaGGGTCGGTGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEEFPGRG*GRWPRL
Trigger: CAGCCGGGGCCACCGACCCCACCCCCTGCCTGGAAA...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCTTTCCAGGCAGGGGGTaGGGTCGGTGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFFPGRG*GRWPRL
Trigger: CAGCCGGGGCCACCGACCCCACCCCCTGCCTGGAAA...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: VGLEKSVEKHCAFAVSSETCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...TTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHTCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTGGTGCTGCAGAACTCTaGGCTGTACTTCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIGAAEL*AVLPRL
Trigger: AAGGCGGGGAAGTACAGCTCAGAGTTCTGCAGCACC...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGCTTAAATTCACGGCTTaGTCCTTCCCTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKLKFTA*SFPFLA
Trigger: TGCGAGGAAAGGGAAGGAGCAAGCCGTGAATTTAAG...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQSGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAACCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGLEKSVEKHCAFAVSSEPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...TTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPSTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR GCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCCCTGGCAGGCGTCGTaGAAGTTTGCCTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLPWQAS*KFAWGP
Trigger: CGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR GCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLESVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEATGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp AGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: RLDVKGAFEEHDGPASLPLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...GGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGGGCGGAAACCTCTCCGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: HPVCSAQDHRQVVGRKPLRSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...GAGAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFQPDGV*PPPAVG
Trigger: CCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTG...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAATGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATCGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGCAGCCTGCCAGGGGTaGGAGGCGATGTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLAACQG*EAMSAK
Trigger: CTTCGCCGACATCGCCTCCCACCCCTGGCAGGCTGC...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGCCCGTTGAAACACCTTaGCTCGCTGCAACCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVPVETP*LAATLV
Trigger: TACCAAGGTTGCAGCGAGCCAAGGTGTTTCAACGGG...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS-3UTR TCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TTGGTAACCTTGGTGTACACACCCGGGACATCCTTCTGTCCACAGCCCAGGCCCATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: LVTLVYTPGTSFCPQPRPIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...GGGCCTGGGCTGTGGACAGAAGGATGTCCCGGGTGTGTACACCAAGGTTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCCACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEEGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTAACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVTCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGGTGCTGCAGAACTCTaGGCTGTACTTCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFGAAEL*AVLPRL
Trigger: AAGGCGGGGAAGTACAGCTCAGAGTTCTGCAGCACC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCCTGTCCCTCCTTTTCCCGGTCTGGAGCACCTAGCCCATTGCCTTGTATGTTACGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SCPSFSRSGAPSPLPCMLRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...TAACATACAAGGCAATGGGCTAGGTGCTCCAGACCGGGAAAAGGAGGGACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR TCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTAGGATCTCAGCTCTaGGCTCCCCACAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRVGSQL*APHSSG
Trigger: GCCGGAGCTGTGGGGAGCTCAGAGCTGAGATCCTAC...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLEEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ACTCCCCTCTCTTGGCCCTCTACATATTCATACCTCCATGGAGAGTGCCTTTTCGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: TPLSWPSTYSYLHGECLFEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...GAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCAGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPASTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGSTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTGGCGTCGTGCAAGTTTaGCTGGGGCCCGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSGVVQV*LGPAAP
Trigger: CGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCC...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGATGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACCAACTTTGAGGCCCTaGTGGGCTCTTGTGACTATA +
Preference number: 4 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAPTLRP*WALVTI
Trigger: TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGG...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEETGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQRSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALRSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGCGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERRSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGACGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGTCACCGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: RRRGGISFAFEESGVPGHRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...GTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VGLEKSVEKHCAFAVSSEITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...TTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGACCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTGGGCGGGTTTCTGTGTaGCGGGAGGATGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLGRVSV*REDAQW
Trigger: CCACTGAGCATCCTCCCGCCACACAGAAACCCGCCC...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGTCTTCATTGCATCCATaGTTGCTTCACAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVSSLHP*LLHSVP
Trigger: AGGGACGCTGTGAAGCAATCATGGATGCAATGAAGA...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCTCTTCATTGCATCCATaGTTGCTTCACAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACSSLHP*LLHSVP
Trigger: AGGGACGCTGTGAAGCAATCATGGATGCAATGAAGA...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGTCTTCATTGCATCCATaGTTGCTTCACAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWSSLHP*LLHSVP
Trigger: AGGGACGCTGTGAAGCAATCATGGATGCAATGAAGA...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTCCGAATAGAAAGGAGACAAGGCCTCATGCTTGCCGTAGCCGGAGAGCTCACACACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: LRIERRQGLMLAVAGELTHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...TGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEETCPCS*CPGPRS
Trigger: GCTACGAGGACCAGGGCATCAGCTACAGGGGCACGT...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGACGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPALCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: TGQPACPNFEALLGSCDYSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATCCCTCTTGCAACTaGATTCTACTACAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RASQPAPTLRPCWALVTINPSCN*ILLQVC
Trigger: GCAGACTTGTAGTAGAATTCAGTTGCAAGAGGGATT...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR TCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTTCTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSSFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGA...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429710.6
CDS-3UTR TCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGAGTCACTGTTTCTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVSHCFF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGAAACAGTGACT...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429710.6
CDS-3UTR GCA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: TGQPACPNFEALLGSCDYHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEEEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFEKYRA*WQVPPL
Trigger: CAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTC...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLICCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICSGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGCCGGGCGACCTCCTGTaGTTGGCAAAGATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRPGDLL*LAKMAA
Trigger: GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGG...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGTCCAGTCCGGCAGCTaGAGGTCCGCCGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFVQSGS*RSAGGR
Trigger: CCTTCCCCCGGCGGACCTGCAGCTGCCGGACTGGAC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGAACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTATCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RASQPAPTLRPCWALVTIKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGACCAACTTTGAGGCCCTaGTGGGCTCTTGTGACTATA +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGPTLRP*WALVTI
Trigger: TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGG...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCCCAACTTTGAGGCCCTaGTGGGCTCTTGTGACTATA +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVPTLRP*WALVTI
Trigger: TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGG...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCTCTGGCTTCCTCCAGTaGCAGCCCCGCGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFSGFLQ*QPRGRN
Trigger: GTTTCTGCCGCGGGGCTGGCACTGGAGGAAGCCAGA...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR CCA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTTTCTCTCCAGCCCTaGACTCCTGTAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: RCGGSGEVCREALRLCSVFSLQP*TPVGSQ
Trigger: CTGAGATCCTACAGGAGTCCAGGGCTGGAGAGAAAA...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGACGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGRSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGCGTAGCACGTGGCCCTaGTATCTATTTCACAGCACT +
Preference number: 4 (lower is better)
Translates to: SRVLLRNMTGQPACPNFERSTWP*YLFHST
Trigger: AGTGCTGTGAAATAGATACCAGGGCCACGTGCTACG...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCT +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRRCCSS*CTRRHS
Trigger: AGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCG...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTACGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGCGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTGCGACCTCCTGTGCTTaGCAAAGATGGCAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLATSCA*QRWQPA
Trigger: GGCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGC...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGCGGAAACCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGGNLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGTTTCCGCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAATCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGGGCGGGTTTCTGTGTaGCGGGAGGATGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLGRVSV*REDAQW
Trigger: CCACTGAGCATCCTCCCGCCACACAGAAACCCGCCC...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352041.7
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGCGTCCCTTAAATTCTaGGACCTCGGCGTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQASLKF*DLGVFS
Trigger: CGAAAACACGCCGAGGTCCCAGAATTTAAGGGACGC...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS-3UTR TCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLTFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCAGGCACCCGACTCGGTaGGGCTGTGCGTGCCACGGT +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFRHPTR*GCACHG
Trigger: ACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCT...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CCGAATAGAAAGGAGACAAGGCCTCATGCTTGCCGTAGCCGGAGAGCTCACACTCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: PNRKETRPHACRSRRAHTLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...AGTGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGAAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGCAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTCTTAAATTCACGGCTTaGTCCTTCCCTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSLKFTA*SFPFLA
Trigger: TGCGAGGAAAGGGAAGGAGCAAGCCGTGAATTTAAG...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGGGGCGAAACGAAGACTaGTCCACACAGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVGRNED*STQQQH
Trigger: GTGCTGCTGCTGTGTGGAGCAGTCTTCGTTTCGCCC...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GGTAACCTTGGTGTACACACCCGGGACATCCTTCTGTCCACAGCCCAGGCCCCAGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: GNLGVHTRDILLSTAQAPVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...TGGGGCCTGGGCTGTGGACAGAAGGATGTCCCGGGTGTGTACACCAAGGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp TCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATACCTTTTGCCCAGGCCCAGTaGCTGGGCACTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: STHFSLYSPLLALYIFIPFAQAQ*LGTGVL
Trigger: CAGAACCCCAGTGCCCAGGCACTGGGCCTGGGCAAA...AGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: ADDAHQSHAAIVQTHQGAKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...GGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAACCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEEPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCCCGCTTCTGCGGTGTaGTGGGTCTGGAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFPASAV*WVWRSL
Trigger: CAGACTTCTCCAGACCCACCACACCGCAGAAGCGGG...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RASQPAPTLRPCWALVTIKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGTGTACTCCCCTCTCTTaGCCCTCTACATATTCATAC +
Preference number: 4 (lower is better)
Translates to: KTGWHGHFLPREEAFLERCTPLS*PSTYSY
Trigger: GTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACA...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGAGAAACAGCCTCTCCTaGAAGCAGTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLRNSLS*KQWAAE
Trigger: CTCTGCCGCCCACTGCTTCCAGGAGAGGCTGTTTCT...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678083.1
3UTR CAA 72 bp GGCCCGCCGCTCCGAGTGTCTCCAGCACACAGCATGTaGTCGGTGACTGTTCTGTTAAGTAAATGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: GPPLRVSPAHSM*SVTVLLSKCCD
Trigger: ATCACAACATTTACTTAACAGAACAGTCACCGACAACATGCTGTGTGCTGGAGACACTCGGAGCGGCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
3UTR CAA 72 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTGTTCCTGGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSH*LLRSRVFLVTV
Trigger: GACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGAGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAACCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQPPGCF*AQGAAM
Trigger: CATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGG...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEETFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCACTTTTGACAGGCACTaGGTGGCACTGTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFTFDRH*VALCPA
Trigger: GGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGT...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CATTTGCTTTTGAGGAGTCGGGTGTTCCTGGTCACGGTCGCATGTTGTCACGAACCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: HLLLRSRVFLVTVACCHEPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...TTCGTGACAACATGCGACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAACGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEERRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEERRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTCGAAGAGCCCTCCTTTaGTGCGAAACTGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFRRALL*CETEAG
Trigger: GCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCG...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCCCAGCTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: APADDAHQSHAAIVQTHQSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...CTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAGCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGAGGTTGGGCTTTAGCTaGAAACAGGGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLRLGFS*KQGGMA
Trigger: GGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCT...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAACAAAGCTGCTCACGGTaGCAGGTCAGGAGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKQSCSR*QVRRLG
Trigger: GCCCAACCTCCTGACCTGTCACCGTGAGCAGCTTTG...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTGGTGCGAGAGGTCCATaGTGGCAACAGAGGAGGATA +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLGARGP*WQQRRI
Trigger: TATCCTCCTCTGTTGCCATCATGGACCTCTCGCACC...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR GCA 90 bp GGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: GDLTSRVLLRNMTGQPACHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...GCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAATCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEESGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: LGKCTLPSPVGSRPASAVVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...CACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTACCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEETRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGISVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCTGGATGGGTACAGTCTGACATGAGCCTCCTTCAGCCGCTCCGAATAGAAAGGTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGWVQSDMSLLQPLRIERSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...CCTTTCTATTCGGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CCGAATAGAAAGGAGACAAGGCCTCATGCTTGCCGTAGCCGGAGAGCTCACACTCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: PNRKETRPHACRSRRAHTLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...AGTGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR GCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQTGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATTTTTCTCTCCAGCCCTaGACTCCTGTAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: QPACPNFEALLGSCDYKYFSLQP*TPVGSQ
Trigger: CTGAGATCCTACAGGAGTCCAGGGCTGGAGAGAAAA...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTTTTTCTCTCCAGCCCTaGACTCCTGTAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSFSLQP*TPVGSQ
Trigger: CTGAGATCCTACAGGAGTCCAGGGCTGGAGAGAAAA...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGAGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAACGGTTCTTCAGCACGTaGCACCAGGGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKRFFST*HQGLAS
Trigger: GGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCG...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAATCACCGTCAGGTGGTaGGGCGGAAACCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKITVRW*GGNLSW
Trigger: CCAGGAGAGGTTTCCGCCCCACCACCTGACGGTGAT...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CCTCTTCCTGAAGTTCACTTCAGACAAGCTCAACTCATTTCTCCCTGTACTCCCAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLPEVHFRQAQLISPCTPKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...GGGAGTACAGGGAGAAATGAGTTGAGCTTGTCTGAAGTGAACTTCAGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAAGATCACCGTCAGGTaGTGGGGCGGAAACCTCTCC +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLKITVR*WGGNLS
Trigger: GGAGAGGTTTCCGCCCCACCACCTGACGGTGATCTT...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTACTACAAGTCTGCCCTTTTGTGACCGGCTCCACTGTACCTTGGTACTTCTCGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: STTSLPFCDRLHCTLVLLENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...GAGAAGTACCAAGGTACAGTGGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCTCCACTGTACCTTaGTACTTCTCTAAATGCCAT +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGGSTVP*YFSKCH
Trigger: ATGGCATTTAGAGAAGTACCAAGGTACAGTGGAGCC...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTCAATGTTGTCCTGTCTaGCTTCCTCCAGTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLQCCPV*LPPVPA
Trigger: GGCTGGCACTGGAGGAAGCCAGACAGGACAACATTG...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR CCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAAGATCACCGTCAGGTaGTGGGGCGGAAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRKITVR*WGGNLV
Trigger: CACCAGGTTTCCGCCCCACCACCTGACGGTGATCTT...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR CCA 90 bp GGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTTATCTTGGTCCCATaGAGGATTAGGCTGTATCTA +
Preference number: 4 (lower is better)
Translates to: GKMHSSLSCRVSSRFCGVVILVP*RIRLYL
Trigger: TAGATACAGCCTAATCCTCCATGGGACCAAGATAAC...CACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR CCA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAATCGCCTGAAGAGTaGGTAGATTGTATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVESPEE*VDCISV
Trigger: AACTGAGATACAATCTACCCACTCTTCAGGCGATTC...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR TCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTCTTCATTGCATCCATaGTTGCTTCACAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFSSLHP*LLHSVP
Trigger: AGGGACGCTGTGAAGCAATCATGGATGCAATGAAGA...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGCTCGCTGCAACTTTTaGCAGGCACTGAGTGGCACT +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRARCNF*QALSGT
Trigger: AGTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLGRCPR*NTLARC
Trigger: GCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCC...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTCTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFLAHEI*EVQGLL
Trigger: CAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAG...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: ASQPAPTLRPCWALVTINSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...ATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGATCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: GWALAENRVAWPLSAQGGSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTACTACAAGTCTGCCCTTTTGTGACCGGCTCCACTGTACCTTGGTACTTCTCAAGTCTGCCCTTTTGTaGCCGGCTCCACTGTACCTT +
Preference number: 4 (lower is better)
Translates to: STTSLPFCDRLHCTLVLLKSALL*PAPLYL
Trigger: AAGGTACAGTGGAGCCGGTCACAAAAGGGCAGACTT...GAGAAGTACCAAGGTACAGTGGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LRCGGSGEVCREALRLCSHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LLRCGGSGEVCREALRLCHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTACTCCCACGTCAGCCTaGGGTTCTTCAGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSTPTSA*GSSARG
Trigger: GCCACGTGCTGAAGAACCGCAGGCTGACGTGGGAGT...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: DKLNSFLPVLPSLGPLHIPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...AATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp TCTACTACAAGTCTGCCCTTTTGTGACCGGCTCCACTGTACCTTGGTACTTCTCTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: STTSLPFCDRLHCTLVLLSTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...GAGAAGTACCAAGGTACAGTGGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLSTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTATCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVSTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAGGGGAAGGCACACAGTaGGGACCACGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQGEGTQ*GPRCSP
Trigger: AGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCC...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAACAAGGCCTCATGCTTaGCGTAGCCGGAGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKTRPHA*RSRRAH
Trigger: GTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGT...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLICPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAGCAGAATTCCACGGGCCAGCCAGCCTaGCCCAACTTTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLVCYRCCVYVKRVKQNSTGQPA*PNFEAL
Trigger: CAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT...GGAATTCTGCTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCAGCTTGATCACGGGGTaGGAGAGGTCCATGATGGCA +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFSLITG*ERSMMA
Trigger: TGCCATCATGGACCTCTCGCACCCCGTGATCAAGCT...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR CCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACTCCCCTCTCTTGGCCCTCTACATATTCATACCTCCATGGAGAGTGCCTTTTCGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: TPLSWPSTYSYLHGECLFGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...GAAAAGGCACTCTCCATGGAGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTACTACAAGTCTGCCCTTTTGTGACCGGCTCCACTGTACCTTGGTACTTCTCTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: STTSLPFCDRLHCTLVLLCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...GAGAAGTACCAAGGTACAGTGGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEECAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAGCAGAATTCCTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: CLVCYRCCVYVKRVKQNSSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...GGAATTCTGCTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LVPLLRCGGSGEVCREALKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
3UTR CAA 72 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTGGTCACGGTCGCATGT +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLL*RSRVFLVTVAC
Trigger: ACATGCGACCGTGACCAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CCTCTTCCTGAAGTTCACTTCAGACAAGCTCAACTCATTTCTCCCTGTACTCCCCACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: PLPEVHFRQAQLISPCTPHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...GGGAGTACAGGGAGAAATGAGTTGAGCTTGTCTGAAGTGAACTTCAGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR TCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTGGTGCTGCAGAACTCTaGGCTGTACTTCCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSGAAEL*AVLPRL
Trigger: AAGGCGGGGAAGTACAGCTCAGAGTTCTGCAGCACC...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGGGTACAGTCTGACATaGGCCTCCTTCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFGYSLT*ASFSRS
Trigger: GGAGCGGCTGAAGGAGGCTCATGTCAGACTGTACCC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAATGGATGGGTACAGTCTaGCATGAGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKWMGTV*HEPPSA
Trigger: GGCTGAAGGAGGCTCATGTCAGACTGTACCCATCCA...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: SGGWALAENRVAWPLSAQSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACT +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSSGPTR*CSSWCT
Trigger: AGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGA...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEESTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRSTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: VGLEKSVEKHCAFAVSSEESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...TTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCCCACCAAAGTCATaGGGCCATCGTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFCPPKS*GHRSDT
Trigger: TGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCA...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGGTCTCGTCCCGCTTCTaGGGTGTGGTGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLVSSRF*GVVGLE
Trigger: CTCCAGACCCACCACACCGCAGAAGCGGGACGAGAC...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTACCAACTTTGAGGCCCTaGTGGGCTCTTGTGACTATA +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVPTLRP*WALVTI
Trigger: TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGG...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTTTTCTCTCCAGCCCTaGACTCCTGTAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIFSLQP*TPVGSQ
Trigger: CTGAGATCCTACAGGAGTCCAGGGCTGGAGAGAAAA...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGTTTTCTCTCCAGCCCTaGACTCCTGTAGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLFSLQP*TPVGSQ
Trigger: CTGAGATCCTACAGGAGTCCAGGGCTGGAGAGAAAA...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCCTTCTGAATCGGGCATaGATTTCCTGGCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: TSSTHFSLYSPLLALYIFLLNRA*ISWLGE
Trigger: TTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAG...GAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGGTCCTCGTAGCACGTaGCCCTGGTATCTATTTCAC +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLGPRST*PWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACC...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAATGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEECLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAACGTGGCACCAGGGCTTaGCATCCCCATCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQRGTRA*HPHQDS
Trigger: GGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACG...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGGTCTCAGGCCGCAGGTaGAGCAGGAGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLVSGRR*SRRAHH
Trigger: GTGATGTGCCCTCCTGCTCCACCTGCGGCCTGAGAC...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCAGGCTGTATCTATTCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICRLYLF*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGAATAGATACAGCCT...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR TCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFRATVG*PIPKVA
Trigger: TGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACG...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATACCTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: STHFSLYSPLLALYIFIPPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...AGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR TCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEELCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAACTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEELCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFSCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGCTTAAATTCACGGCTTaGTCCTTCCCTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLLKFTA*SFPFLA
Trigger: TGCGAGGAAAGGGAAGGAGCAAGCCGTGAATTTAAG...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678676.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: CGGSGEVCREALRLCSVFHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: DRSGGWALAENRVAWPLSHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTGTGCCCTGCCACTGTTaGACCAGCAATATTCCACCC +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSVPCHC*TSNIPP
Trigger: GGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGTGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLCCSSW*TRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCA...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGAATCCGATTTCAGCTaGAGCAGCGCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRESDFS*SSAMSL
Trigger: CAATGACATTGCGCTGCTGCAGCTGAAATCGGATTC...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTAGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLISVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAGCAGAATTCCGGCATGGCCACTTTCTaGCCAGGGAGGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: CLVCYRCCVYVKRVKQNSGMATF*PGRRHS
Trigger: GGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCC...GGAATTCTGCTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp GACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCCAACTTTGAGGCCCTaGTGGGCTCTTGTGACTATA +
Preference number: 4 (lower is better)
Translates to: DKLNSFLPVLPSLGPLHIPTLRP*WALVTI
Trigger: TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGG...AATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQKYRAC*QVPPLK
Trigger: TTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTT...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCT +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLRCCSS*CTRRHS
Trigger: AGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCG...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGTGTGCTTGGCAAAGATaGCAGCCTGCCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLCAWQR*QPARGG
Trigger: CCCACCCCTGGCAGGCTGCCATCTTTGCCAAGCACA...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATACCTCTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: STHFSLYSPLLALYIFIPLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...AGGTATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR TCA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAACTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: LEKSVEKHCAFAVSSEEELERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...TTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCATTCTACTACAAGTCTaGCCTTTTGTGACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFILLQV*PFVTGS
Trigger: GGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGAAT...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp AGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATATACCTCCATGGAGAGTaGCTTTTCCACACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSTHFSLYSPLLALYIFIYLHGE*LFHTCP
Trigger: TGGACAGGTGTGGAAAAGGCACTCTCCATGGAGGTA...TATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCATGGATTTCCTGGCTaGGCGAAACGAAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSHGFPG*AKRRLL
Trigger: GAGCAGTCTTCGTTTCGCCCAGCCAGGAAATCCATG...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp CAGCAGCGCAATGTCATTGTCGTAAGTGTCATCATCGAATTCCTTATGGACAATCGGGCATGGATTTCCTaGCTGGGCGAAACGAAGACT +
Preference number: 4 (lower is better)
Translates to: QQRNVIVVSVIIEFLMDNRAWIS*LGETKT
Trigger: AGTCTTCGTTTCGCCCAGCCAGGAAATCCATGCCCG...ATTGTCCATAAGGAATTCGATGATGACACTTACGACAATGACATTGCGCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGTCATCATCGAATTCCTTATGGACAATGTATTTTTCGACTTCAAATTTCTGCTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: VSSSNSLWTMYFSTSNFCSCKFA*GPPLRV
Trigger: CACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGA...GCAGAAATTTGAAGTCGAAAAATACATTGTCCATAAGGAATTCGATGATGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGGGAGTCGGGTGTTCCTaGTCACGGTCGCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLGVGCS*SRSHVV
Trigger: GACAACATGCGACCGTGACCAGGAACACCCGACTCC...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CAGCAGCGCAATGTCATTGTCGTAAGTGTCATCATCGAATTCCTTATGGACAATGGGCGCAGCCATGACTaGTGTTGCTGGTATATCATC +
Preference number: 4 (lower is better)
Translates to: QQRNVIVVSVIIEFLMDNGRSHD*CCWYII
Trigger: GATGATATACCAGCAACATCAGTCATGGCTGCGCCC...ATTGTCCATAAGGAATTCGATGATGACACTTACGACAATGACATTGCGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR TCA 90 bp TTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTGATCTCATTTGCTTTTaGGGAGTCGGGTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FAVSSEEEEAGSHLLLRSDLICF*GVGCSW
Trigger: CCAGGAACACCCGACTCCTCAAAAGCAAATGAGATC...ACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGTCATGTCTTCCCATCTaGCAGAGTATCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEASCLPI*QSILKS
Trigger: TGATTTCAGGATACTCTGTCAGATGGGAAGACATGA...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAACTTAAATTCACGGCTTaGTCCTTCCCTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKLKFTA*SFPFLA
Trigger: TGCGAGGAAAGGGAAGGAGCAAGCCGTGAATTTAAG...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000678676.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGGCATTCCTGGAGAGGCTAGTGTGCATTCATGTCTTCCCATCTGACAGAGTAGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: EAFLERLVCIHVFPSDRVVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...TACTCTGTCAGATGGGAAGACATGAATGCACACTAGCCTCTCCAGGAATGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: AVSSEEEEAGSHLLLRSRVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...CCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGCCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLPPGMF*PRSPSG
Trigger: ACCTGACGGTGATCTTGGGCAGAACATACCGGGTGG...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATATCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSTHFSLYSPLLALYIFISVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...TATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCTGCCTATCAGGATCATaGAATTCCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFCLSGS*NSTGGR
Trigger: CCTGCCTCCCGTGGAATTCCATGATCCTGATAGGCA...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGTGTGCAGCGGCTGGATaGGTACAGTCTGACATGAGC +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLCAAAG*VQSDMS
Trigger: GCTCATGTCAGACTGTACCCATCCAGCCGCTGCACA...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGAAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCAAAATGGGAAGTATCTaGGAAAATGCACTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICKMGSI*ENALFP
Trigger: AGGGAAGAGTGCATTTTCCCAGATACTTCCCATTTT...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGGAAAACAGGGTGGCATaGCCACTTTCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLENRVA*PLSAQG
Trigger: TCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTC...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp CTAGCCCATTGCCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAGATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: LAHCLVCYRCCVYVKRVKIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...CTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCAATGGGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR TCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQIWLLF*IGHGFP
Trigger: AGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGAT...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGCACAGGGCGCAGCCATaGCTGATGTTGCTGGTATAT +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLHRAQP*LMLLVY
Trigger: ATATACCAGCAACATCAGTCATGGCTGCGCCCTGTG...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLPLMRN*GWLYCL
Trigger: GAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGG...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAACTTTGCAGTGTCTTCTaGAGAAGAAGAGGCGGGATC +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQLCSVF*RRRGGI
Trigger: GATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAG...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: STAPLQCLLKKKRRDLICAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR TCA 90 bp GTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGCAATCCGTCTTTCCTaGAAGATCTTGTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: VGLEKSVEKHCAFAVSSEAIRLS*KILLSF
Trigger: AAAAGATAACAAGATCTTTCAGGAAAGACGGATTGC...TTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAGGCACTGGGGTTCTGTaGTGTGTAAACCTTGCCTAT +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQGTGVL*CVNLAY
Trigger: ATAGGCAAGGTTTACACAGCACAGAACCCCAGTGCC...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGTCGACTTCAAATTTCTaGTCCTCCTCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLSTSNF*SSSPGT
Trigger: GGTCCCTGGCGAGGAGGAGCAGAAATTTGAAGTCGA...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQNPSGH*HTKSEK
Trigger: CTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GTGTCATCATCGAATTCCTTATGGACAATGTATTTTTCGACTTCAAATTTCTGCCCTCCCGAATCGCCCTaGCAGGCGTCGTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VSSSNSLWTMYFSTSNFCPPESP*QASCKF
Trigger: AAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGG...GCAGAAATTTGAAGTCGAAAAATACATTGTCCATAAGGAATTCGATGATGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR TCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAATCTTCATTGCATCCATaGTTGCTTCACAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQSSLHP*LLHSVP
Trigger: AGGGACGCTGTGAAGCAATCATGGATGCAATGAAGA...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCTTAAATTCACGGCTTaGTCCTTCCCTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFLKFTA*SFPFLA
Trigger: TGCGAGGAAAGGGAAGGAGCAAGCCGTGAATTTAAG...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429710.6
ENST00000519510.5
ENST00000678676.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGTAAATGTTGTGATGTaGAGCGGCTGGATGGGTACA +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFVNVVM*SGWMGT
Trigger: TGTACCCATCCAGCCGCTGCACATCACAACATTTAC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp AGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCATAAAGTATCTGGGAAAATaGACTCTTCCCTCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SSTHFSLYSPLLALYIFIKYLGK*TLPSPV
Trigger: TACAGGAGAGGGAAGAGTGCATTTTCCCAGATACTT...TATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCTGGAGAGGCTAGTGTaGATTCATGTCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFLERLV*IHVFPS
Trigger: AGATGGGAAGACATGAATGCACACTAGCCTCTCCAG...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGCCAACTTTGAGGCCCTaGTGGGCTCTTGTGACTATA +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLPTLRP*WALVTI
Trigger: TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGG...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp CCTCTTCCTGAAGTTCACTTCAGACAAGCTCAACTCATTTCTCCCTGTACTCCCTGGTACTTCTCTAAATaGCATATTAGCCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: PLPEVHFRQAQLISPCTPWYFSK*HISPSD
Trigger: GTCTGATGGGCTAATATGGCATTTAGAGAAGTACCA...GGGAGTACAGGGAGAAATGAGTTGAGCTTGTCTGAAGTGAACTTCAGGAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR GCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQEPSLH*IHDCFT
Trigger: TGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTC...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGTCTGTAGAGAAGCACTaGGCCTTTGCAGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLSVEKH*AFAVSS
Trigger: AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAACATTGCATCCATGATTaGTTCACAGCGTCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQHCIHD*FTASLK
Trigger: TTTAAGGGACGCTGTGAAGCAATCATGGATGCAATG...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR GCA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGTGCTGTGTAAACCTTaGCTATCAGGATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFVLCKP*LSGSWN
Trigger: ATTCCATGATCCTGATAGGCAAGGTTTACACAGCAC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CCA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGGTATCTCAGTTATCTTaGTCCCATGGAGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLVSQLS*SHGGLG
Trigger: GCCTAATCCTCCATGGGACCAAGATAACTGAGATAC...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR CAA 90 bp GGGCCTCCCGAATCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: GPPESPWQASCKFAWGPPALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...CGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGATTCGGGAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CAA 90 bp TCGCCCTGGCAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGCTCCGAGTGTCTAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SPWQASCKFAWGPPLRVSRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...AGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS GCA 90 bp TGGCGTCTGGCCTCCGCCCGCTGTAGGGCTTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACTCGGCGCCACTCTCCGCTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: WRLASARCRASGPTR*CSSWCTRRHSPLCS
Trigger: GGAGCACAGCGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGAAGCCCTACAGCGGGCGGAGGCCAGACGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS GCA 90 bp GCCCGCTGTAGGGCTTCTGGGCCAACGCGCTGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCGCTGTGCTCCACGTGCCCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: ARCRASGPTRCCSSW*TRRHSPLCSTCPCS
Trigger: GCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGAAGCCCTACAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 90 bp TCCGCCCGCTGTAGGGCTTCTGGGCCAACGCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCTCCGCTGTGCTCCACGTGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: SARCRASGPTRCCSS*CTRRHSPLCSTCPC
Trigger: ACAGGGGCACGTGGAGCACAGCGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGAAGCCCTACAGCGGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CAGGTCCGCCGGGGGAAGGCACACAGTGCGGACCACGCTGCTCTCCTGGGCACAGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QVRRGKAHSADHAALLGTGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...TGTGCCCAGGAGAGCAGCGTGGTCCGCACTGTGTGCCTTCCCCCGGCGGACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CAA 90 bp CCGCACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: PHRNRSPGDLLCLAKMAAALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...GGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CAA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: RASQPAPTLRPCWALVTIALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LVPLLRCGGSGEVCREALRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 90 bp GGGTGGGAGGCGATGTCGGCGAAGAGCCCTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTCAGGCCGCAGGTGGCTGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GWEAMSAKSPPLMRN*GWLYCLRPQVAGEE
Trigger: TTCCTCCCCAGCCACCTGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGCCTCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522812.1
CDS-3UTR CAA 90 bp TCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SSLSCRVSSRFCGVVGLEWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...CTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CACAGGAACCGCTCTCCGGGCGACCTCCTGTGCTTGGCAAAGATGGCAGCCTGCACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: HRNRSPGDLLCLAKMAACTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCCCGGAGAGCGGTTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CAA 90 bp CCGCAGGTGGAGCAGGAGGGCACATCACAGTACTCCCACGTCAGCCTGCGGTTCACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: PQVEQEGTSQYSHVSLRFTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...GAACCGCAGGCTGACGTGGGAGTACTGTGATGTGCCCTCCTGCTCCACCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CAA 90 bp TCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLSCRVSSRFCGVVGLEKGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...CTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GWALAENRVAWPLSAQGGRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 90 bp TGCACTCGGCGCCACTCTCCGCTGTGCTCCACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGCACGTGGCCCTGGTATCTATTTCAC +
Preference number: 5 (lower is better)
Translates to: CTRRHSPLCSTCPCS*CPGPRSTWPWYLFH
Trigger: GTGAAATAGATACCAGGGCCACGTGCTACGAGGACCAGGGCATCAGCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCGCCGAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000521694.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 90 bp GCAGGAGGCACCCGACTCGGTGAGGCTGTGCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCAGTCACTGTTTCCCTCAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: AGGTRLGEAVRATVG*PIPKVAVTVSLRAG
Trigger: GCCTGCTCTGAGGGAAACAGTGACTGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524261.1
ENST00000677722.1
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GCTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: ADDAHQSHAAIVQTHQGAWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...GGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CAA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: FCSSSPGTTRYVLPKITVGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...GACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521042.1
ENST00000678676.1
CDS-3UTR CAA 90 bp GGTAACCTTGGTGTACACACCCGGGACATCCTTCTGTCCACAGCCCAGGCCCCACAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: GNLGVHTRDILLSTAQAPQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...TGGGGCCTGGGCTGTGGACAGAAGGATGTCCCGGGTGTGTACACCAAGGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS CCA 90 bp CCTTCGGGGCACTGGCACACGAAATCTGAGAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAACACCTTGGCTCGCTGCAACCTTGG +
Preference number: 5 (lower is better)
Translates to: PSGHWHTKSEKYRAC*QVPPLKHLGSLQPW
Trigger: CCAAGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS CCA 90 bp CCTTCGGGGCACTGGCACACGAAATCTGAGAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAACACCTTGGCTCGCTGCAACCTGTC +
Preference number: 5 (lower is better)
Translates to: PSGHWHTKSEKYRAC*QVPPLKHLGSLQPV
Trigger: GACAGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CCA 90 bp CCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTaGGGCGGAAACCTGGTGGAGAAACAGCCTCTCCTGGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: PGTTRYVLPKITVRW*GGNLVEKQPLLEAV
Trigger: CACTGCTTCCAGGAGAGGCTGTTTCTCCACCAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS CCA 90 bp TCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTaGTGGGGCGGAAACCTGGTGGAGAAACAGCCTCTCCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SPGTTRYVLPKITVR*WGGNLVEKQPLLEA
Trigger: TGCTTCCAGGAGAGGCTGTTTCTCCACCAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR CAA 90 bp GGGGTGGGAGGCGATGTCGGCGAAGAGCCCTCCTTTGATGCGAAACTGAGGCTGGGCTCGCTGCAACTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: GVGGDVGEEPSFDAKLRLGSLQL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGCC...CAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGCCTCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CAA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: LRCGGSGEVCREALRLCSALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCAGGGGGCCTGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LMMPTKVMRPSFRHTRGPGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...AGGCCCCCTGGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CAA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LVPLLRCGGSGEVCREALQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: TGQPACPNFEALLGSCDYCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LRCGGSGEVCREALRLCSWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CCGAATAGAAAGGAGACAAGGCCTCATGCTTGCCGTAGCCGGAGAGCTCACACTGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: PNRKETRPHACRSRRAHTALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...AGTGTGAGCTCTCCGGCTACGGCAAGCATGAGGCCTTGTCTCCTTTCTATTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CAA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: LVPLLRCGGSGEVCREALTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: PSPVGSRPASAVWWVWRSEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...ACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 90 bp GCAGGAGGCACCCGACTCGGTGAGGCTGTGCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCAGTCACTGTTTCTTTTGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: AGGTRLGEAVRATVG*PIPKVAVTVSFDRH
Trigger: GTGCCTGTCAAAAGAAACAGTGACTGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACGCACAGCCTCACCGAGTCGGGTGCCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429710.6
CDS GCA 90 bp AATCCTTCGGGGCACTGGCACACGAAATCTGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTGAAACACCTTGGCTCGCTGCAACCT +
Preference number: 5 (lower is better)
Translates to: NPSGHWHTKSEKYRA*WQVPPLKHLGSLQP
Trigger: AGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352041.7
ENST00000521647.1
CDS GCA 90 bp TGTTTTCGTCTTCCCTCCCTCCCTTCCTCTCTCCCTCCCACGGCTTaGTCCTTCCCTTTCCTCGCAGAGGTTTTCTCTCCAGCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: CFRLPSLPSSLPPTA*SFPFLAEVFSPALD
Trigger: GTCCAGGGCTGGAGAGAAAACCTCTGCGAGGAAAGGGAAGGAGCAAGCCGTGGGAGGGAGAGAGGAAGGGAGGGAGGGAAGACGAAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS GCA 90 bp CTTCAAATTTCTGCTCCTCCTCGCCAGGGACCACCCGGTATGTTCTaGCCAAGATCACCGTCAGGTGGTGGGGCGGAAACCTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LQISAPPRQGPPGMF*PRSPSGGGAETWWR
Trigger: TCTCCACCAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGGAGCAGAAATTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS CCA 90 bp TCCATGATGGCAACAGAGGAGGATAAGCCGCAATGTTGTCCTGTCTaGCTTCCTCCAGTGCCAGCCCCGCGGCAGAAACGCCAGACATGC +
Preference number: 5 (lower is better)
Translates to: SMMATEEDKPQCCPV*LPPVPAPRQKRQTC
Trigger: GCATGTCTGGCGTTTCTGCCGCGGGGCTGGCACTGGAGGAAGCCAGACAGGACAACATTGCGGCTTATCCTCCTCTGTTGCCATCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS CCA 90 bp AGGATTAGGCTGTATCTATTCTGGCAGGCGTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTGTCTCCAGCACACAGCATGTTGTCG +
Preference number: 5 (lower is better)
Translates to: RIRLYLFWQASCKFA*GPPLRVSPAHSMLS
Trigger: CGACAACATGCTGTGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGAATAGATACAGCCTAATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR CAA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGGCTCGCTGCAACTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWGSLQL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGCC...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SGGWALAENRVAWPLSAQWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...CTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: SRVLLRNMTGQPACPNFETWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: LRCGGSGEVCREALRLCSTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCCCTCTTGCAACTGAATTCTACTACAAGTCTGCCCTTTTGTGACCGGCTCCACAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SLLQLNSTTSLPFCDRLHRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...GTGGAGCCGGTCACAAAAGGGCAGACTTGTAGTAGAATTCAGTTGCAAGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CAA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CGTCAGCCTGCGGTTCTTCAGCACGTGGCACCAGGGCTTGGCATCCCCATCAGGAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RQPAVLQHVAPGLGIPIRRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...CCTGATGGGGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCGCAGGCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS TCA 90 bp ACAGCACTTCCCAGCAAATCCTTCGGGGCACTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTGGCAGGTGCCCCCGTTGAAACACCT +
Preference number: 5 (lower is better)
Translates to: TALPSKSFGALAHEI*EVQGLLAGAPVETP
Trigger: AGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATTTGCTGGGAAGTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000520523.5
ENST00000521647.1
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS GCA 90 bp AATCCTTCGGGGCACTGGCACACGAAATCTGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTGAAACACCTTGGCTCGCTGCAACTT +
Preference number: 5 (lower is better)
Translates to: NPSGHWHTKSEKYRA*WQVPPLKHLGSLQL
Trigger: AAGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000520523.5
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS GCA 90 bp CAGAGGAGGATAAGCCGCAATGTTGTCCTGTCTGGCTTCCTCCAGTaGCAGCCCCGCGGCAGAAACGCCAGACATGCATCTAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: QRRISRNVVLSGFLQ*QPRGRNARHASRRG
Trigger: TCCTCTTCTAGATGCATGTCTGGCGTTTCTGCCGCGGGGCTGGCACTGGAGGAAGCCAGACAGGACAACATTGCGGCTTATCCTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS-3UTR CAA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: SRVLLRNMTGQPACPNFEQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: KTGWHGHFLPREEAFLERCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAATATTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: QPACPNFEALLGSCDYKYWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...ATATTTATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCGTAGCACCAGGGCTTaGAGTCTCGATCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: RLDVKGAFEEHDGPASLPRSTRA*SLDLGF
Trigger: GAAACCCAGATCGAGACTCAAAGCCCTGGTGCTACG...GGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: TGQPACPNFEALLGSCDYGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CCTCCTCGCCAGGGACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PPRQGPPGMFCPRSPSGGGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...ACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGTCCCTGGCGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CAA 90 bp AAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: KCTLPSPVGSRPASAVWWEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...CCACCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: DRSGGWALAENRVAWPLSQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAAACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LDVKGAFEEHDGPASLPQTSRVL*RNMTGQ
Trigger: CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGT...TTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ACGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: TGQPACPNFEALLGSCDYKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...ATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CGGGCCAGCCAGCCTGCCCCAACTTTGAGGCCCTGCTGGGCTCTTGTGACTATAAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: RASQPAPTLRPCWALVTIKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...TATAGTCACAAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTGGCTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 90 bp ACACGAAATCTGAGAAGTACAGGGCCTGCTGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGCAACCTTGGTAAGATCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: TRNLRSTGPAGRCPR*NTLARCNLGKIWLL
Trigger: GAGGAGCCAGATCTTACCAAGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS GCA 90 bp GGCAGGGGCTGGAGGAGGAGGCCCGTGTGTGTAAACATAGGTGAGTaGATGTGGGTGTGTTGTGTGATCTGTATGAACTGGAGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: GRGWRRRPVCVNIGE*MWVCCVICMNWSRE
Trigger: TTCCCGGCTCCAGTTCATACAGATCACACAACACACCCACATGCACTCACCTATGTTTACACACACGGGCCTCCTCCTCCAGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522812.1
CDS-3UTR CAA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGACGTAGCACCAGGGCTTaGAGTCTCGATCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: GWALAENRVAWPLSAQGGRSTRA*SLDLGF
Trigger: GAAACCCAGATCGAGACTCAAAGCCCTGGTGCTACG...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGCGTAGCACCAGGGCTTaGAGTCTCGATCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVRSTRA*SLDLGF
Trigger: GAAACCCAGATCGAGACTCAAAGCCCTGGTGCTACG...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTTTACACACTGTACACAAAAGGAATACCTTCTGAGAGCCAGGGAGTGGGGAAAAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LYTLYTKGIPSESQGVGKRRRAS*PGARRS
Trigger: GGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCT...TTTCCCCACTCCCTGGCTCTCAGAAGGTATTCCTTTTGTGTACAGTGTGTAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: LLRCGGSGEVCREALRLCEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...GCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCTGCCCCAACTTTGAGACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SRVLLRNMTGQPACPNFETSRVL*RNMTGQ
Trigger: CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGT...CTCAAAGTTGGGGCAGGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LRCGGSGEVCREALRLCSTSRVL*RNMTGQ
Trigger: CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGT...ACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAG +
Preference number: 5 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPATSRVL*RNMTGQ
Trigger: CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGT...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 90 bp CTGGTATCTATTTCACAGCACTTCCCAGCAAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAGTACAGGGCCTGCTGGCAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LVSISQHFPANPSGH*HTKSEKYRACWQVP
Trigger: GGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATTTGCTGGGAAGTGCTGTGAAATAGATACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521647.1
ENST00000521694.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: CGGSGEVCREALRLCSVFQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: DRSGGWALAENRVAWPLSQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGGCTCGCTGCAACTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSGSLQL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGCC...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEAWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLWQVPP*KHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCA...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: ALAENRVAWPLSAQGGGIGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...AATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGGCCCCAGCTGATGATGCCCACCAAAGTCATGCGGCCATCGTTCAGACACACCGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RPQLMMPTKVMRPSFRHTGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...GGTGTGTCTGAACGATGGCCGCATGACTTTGGTGGGCATCATCAGCTGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CAA 90 bp AAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGAGGCATTCCTGGAGAGGAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: KTGWHGHFLPREEAFLERRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...CCTCTCCAGGAATGCCTCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SCRVSSRFCGVVGLEKSVRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...TACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACCCTACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LVPLLRCGGSGEVCREALKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...CAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAGCCCTCCTTTGATGCGAAACTGAGGCTGGCTGTACTGTCTCAGGCCGCAGGTAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: EPSFDAKLRLAVLSQAAGKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...ACCTGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS-3UTR CAA 90 bp CAGGCGTCGTGCAAGTTTGCCTGGGGCCCGCCGCTCCGAGTGTCTCCAGCACACCAGTATAAAACAGGGTaGTGGCAACAGAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: QASCKFAWGPPLRVSPAHQYKTG*WQQKVK
Trigger: TTTTACTTTCTGTTGCCACAACCCTGTTTTATACTG...GTGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS-3UTR CAA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGGAGCACCTAGCCCATaGCCTTGTATGTTACAGGTG +
Preference number: 5 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVGAPSP*PCMLQV
Trigger: CACCTGTAACATACAAGGCAATGGGCTAGGTGCTCC...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CAA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGCAGTCACTGTTTCTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWQSLFL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGAAACAGTGACTG...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429710.6
CDS TCA 90 bp GTGCCCTGCCACTGTTGCACCAGCAATATTCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATGACTGATGTTGCTGGTATATCATCT +
Preference number: 5 (lower is better)
Translates to: VPCHCCTSNIPPGCF*AQGAAMTDVAGISS
Trigger: AGATGATATACCAGCAACATCAGTCATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000520523.5
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GGTCTCGTCCCGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCAATCTCTGCAGATCACTaGGTAAGATCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GLVPLLRCGGSGEVCREAISADH*VRSGSS
Trigger: AGAGGAGCCAGATCTTACCAAGTGATCTGCAGAGAT...TGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCGGGACGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: STAPLQCLLKKKRRDLICQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: VVGLEKSVEKHCAFAVSSCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...AGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GACAGGTCAGGAGGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: DRSGGWALAENRVAWPLSCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...AGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACCTCCTGACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: CGGSGEVCREALRLCSVFCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGGCTCGCTGCAACTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: STAPLQCLLKKKRRDLICGSLQL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGCC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLITWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: CGVVGLEKSVEKHCAFAVGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...CACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CGCTTCTGCGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RFCGVVGLEKSVEKHCAFGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...AAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCGCAGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: CGGSGEVCREALRLCSVFEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RCGGSGEVCREALRLCSVRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAG +
Preference number: 5 (lower is better)
Translates to: CGGSGEVCREALRLCSVFTSRVL*RNMTGQ
Trigger: CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGT...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCCAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: EGDLTSRVLLRNMTGQPAKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...GGCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGCCAGCAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GRRLDVKGAFEEHDGPASKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...GCTGGCTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS GCA 90 bp CAGCAGCAGCACACAGCAGAGCCCTCTCTTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAATTCTGGGACCTCGGCGTGTTTTCG +
Preference number: 5 (lower is better)
Translates to: QQQHTAEPSLHCIHD*FTASLKFWDLGVFS
Trigger: CGAAAACACGCCGAGGTCCCAGAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTGCTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS CCA 90 bp AAAAGGAAGCCCCTAATGACAGCCTCCTTCTGTGTGCTCAGGCCATaGTTCCAGGAGCCCTGTCTACCACAATCCACACACACTCAAGTC +
Preference number: 5 (lower is better)
Translates to: KRKPLMTASFCVLRP*FQEPCLPQSTHTQV
Trigger: GACTTGAGTGTGTGTGGATTGTGGTAGACAGGGCTCCTGGAACCATGGCCTGAGCACACAGAAGGAGGCTGTCATTAGGGGCTTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS-3UTR CAA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: RSTAPLQCLLKKKRRDLIQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...AATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: SVEKHCAFAVSSEEEEAGCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...TCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: STAPLQCLLKKKRRDLICEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VEKHCAFAVSSEEEEAGSTSRVL*RNMTGQ
Trigger: CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGT...AGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS GCA 90 bp CAGCAGCAGCACACAGCAGAGCCCTCTCTTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAATTCACGGCTTGCTCCTTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: QQQHTAEPSLHCIHD*FTASLKFTACSFPF
Trigger: GAAAGGGAAGGAGCAAGCCGTGAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTGCTGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000677722.1
ENST00000678676.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTCAATATTCCACCCGGTaGCTTCTGAGCACAGGGCGC +
Preference number: 5 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFQYSTR*LLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTG...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGGGCTCGCTGCAACTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRGSLQL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGCC...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTGGCTCGCTGCAACTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFGSLQL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGCC...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGGCTCGCTGCAACTTTaGACAGGCACTGAGTGGCAC +
Preference number: 5 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLGSLQL*TGTEWH
Trigger: GTGCCACTCAGTGCCTGTCAAAAGTTGCAGCGAGCC...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGCGCTGCTGTTCCAGTaGGTGCACTCGGCGCCACTC +
Preference number: 5 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFALLFQ*VHSAPL
Trigger: GAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGCGTAGCACCAGGGCTTaGAGTCTCGATCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: KSVEKHCAFAVSSEEEEARSTRA*SLDLGF
Trigger: GAAACCCAGATCGAGACTCAAAGCCCTGGTGCTACG...CGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: KHCAFAVSSEEEEAGSHLGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...CAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: CGGSGEVCREALRLCSVFGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCCTGGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: SEEEEAGSHLLLRSRVFLEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: CGGSGEVCREALRLCSVFRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...GAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AAAGGGGAAGGAGACTTGACGTCAAGGGTGCTTTTGAGGAACATGACGGGCCAGAAAGGGGAAGGAGACTaGACGTCAAGGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: KGEGDLTSRVLLRNMTGQKGEGD*TSRVLL
Trigger: CAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT...CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGTCAAGTCTCCTTCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTGGGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTTGTATCTCAGTTATCTaGGTCCCATGGAGGATTAGG +
Preference number: 5 (lower is better)
Translates to: SGKMHSSLSCRVSSRFCGCISVI*VPWRIR
Trigger: CCTAATCCTCCATGGGACCAAGATAACTGAGATACA...ACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR CAA 90 bp ACAAGCTCAACTCATTTCTCCCTGTACTCCCCTCTCTTGGCCCTCTACATATTCTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACC +
Preference number: 5 (lower is better)
Translates to: TSSTHFSLYSPLLALYIFCALPL*HQQYST
Trigger: GGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACA...GAATATGTAGAGGGCCAAGAGAGGGGAGTACAGGGAGAAATGAGTTGAGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CAA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGCGTAGCACCAGGGCTTaGAGTCTCGATCTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLRSTRA*SLDLGF
Trigger: GAAACCCAGATCGAGACTCAAAGCCCTGGTGCTACG...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCGGCGACCTCCTGTGCTaGGCAAAGATGGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFGDLLC*AKMAAC
Trigger: GCAGGCTGCCATCTTTGCCAAGCACAGGAGGTCGCC...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp AGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: STAPLQCLLKKKRRDLICGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...GCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: EKHCAFAVSSEEEEAGSHRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...ATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAGCCTGCCCCAACTTaGAGGCCCTGCTGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFQPAPT*RPCWAL
Trigger: AAGAGCCCAGCAGGGCCTCAAAGTTGGGGCAGGCTG...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCACGTCAAGGGTGCTTTaGAGGAACATGACGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFTSRVL*RNMTGQ
Trigger: CTGGCCCGTCATGTTCCTCAAAAGCACCCTTGACGT...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp ACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGGCTCGCTGCAACCTaGGTAAGATCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TAPLQCLLKKKRRDLICFWLAAT*VRSGSS
Trigger: AGAGGAGCCAGATCTTACCAAGGTTGCAGCGAGCCA...AAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS-3UTR CAA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTC +
Preference number: 5 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQTWHQG*ASPSGF
Trigger: GAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGT...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GGAAAATGCACTCTTCCCTCTCCTGTAGGGTCTCGTCCCGCTTCTGCGGTGTGGCAGTATAAAACAGGGTaGTGGCAACAGAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: GKCTLPSPVGSRPASAVWQYKTG*WQQKVK
Trigger: TTTTACTTTCTGTTGCCACAACCCTGTTTTATACTG...CCACACCGCAGAAGCGGGACGAGACCCTACAGGAGAGGGAAGAGTGCATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CAA 90 bp GTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAACTGTACTCCCCTCTCTaGGCCCTCTACATATTCATA +
Preference number: 5 (lower is better)
Translates to: VGLEKSVEKHCAFAVSSELYSPL*ALYIFI
Trigger: TATGAATATGTAGAGGGCCAAGAGAGGGGAGTACAG...TTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS TCA 90 bp GTTTCTGAAAAATCAGCCAAGGGAAGGGCCAGGGTAGGTCAAAGGTaGAGCCTCTCCTTTAGGACCCAAGGACTTTGGTATCCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: VSEKSAKGRARVGQR*SLSFRTQGLWYPFL
Trigger: CAGAAAAGGATACCAAAGTCCTTGGGTCCTAAAGGAGAGGCTTCACCTTTGACCTACCCTGGCCCTTCCCTTGGCTGATTTTTCAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS GCA 90 bp CAGCAGCAGCACACAGCAGAGCCCTCTCTTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAATTTCCAGATCTTCTCTTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: QQQHTAEPSLHCIHD*FTASLKFPDLLFLS
Trigger: GCTGAGAAAGAGAAGATCTGGAAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTGCTGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521694.1
CDS CCA 90 bp CAAGGACTCAGAATACAGCCTTTTGTCTCTTATCTACCTATGGCCTaGAAGCCCTTGCTTCGAGTTATCCCAACTTTCCCGACCAAACCG +
Preference number: 5 (lower is better)
Translates to: QGLRIQPFVSYLPMA*KPLLRVIPTFPTKP
Trigger: CGGTTTGGTCGGGAAAGTTGGGATAACTCGAAGCAAGGGCTTCCAGGCCATAGGTAGATAAGAGACAAAAGGCTGTATTCTGAGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS-3UTR CAA 90 bp GTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGATCTCTGCAGATCACTaGGTAAGATCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: VSSEEEEAGSHLLLRSRVISADH*VRSGSS
Trigger: AGAGGAGCCAGATCTTACCAAGTGATCTGCAGAGAT...CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGAGTCGGGTGTTCGGATCTCATTTGCTTTaGAGGAGTCGGGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SSEEEEAGSHLLLRSRVFGSHLL*RSRVFL
Trigger: CAGGAACACCCGACTCCTCAAAAGCAAATGAGATCC...GAACACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CCTCTTCCTGAAGTTCACTTCAGACAAGCTCAACTCATTTCTCCCTGTACTCCCAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PLPEVHFRQAQLISPCTPRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...GGGAGTACAGGGAGAAATGAGTTGAGCTTGTCTGAAGTGAACTTCAGGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CAA 90 bp CGGTGTGGTGGGTCTGGAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCCAGTATAAAACAGGGTaGTGGCAACAGAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: RCGGSGEVCREALRLCSVQYKTG*WQQKVK
Trigger: TTTTACTTTCTGTTGCCACAACCCTGTTTTATACTG...GACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTCCAGACCCACCACACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CAA 90 bp GGTTGGGCTTTAGCTGAAAACAGGGTGGCATGGCCACTTTCTGCCCAGGGAGGACAGTATAAAACAGGGTaGTGGCAACAGAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: GWALAENRVAWPLSAQGGQYKTG*WQQKVK
Trigger: TTTTACTTTCTGTTGCCACAACCCTGTTTTATACTG...TCCTCCCTGGGCAGAAAGTGGCCATGCCACCCTGTTTTCAGCTAAAGCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS CCA 90 bp CTGATCAAGGACTCAGAATACAGCCTTTTGTCTCTTATCTACCTATaGCCTGGAAGCCCTTGCTTCGAGTTATCCCAACTTTCCCGACCA +
Preference number: 5 (lower is better)
Translates to: LIKDSEYSLLSLIYL*PGSPCFELSQLSRP
Trigger: TGGTCGGGAAAGTTGGGATAACTCGAAGCAAGGGCTTCCAGGCCATAGGTAGATAAGAGACAAAAGGCTGTATTCTGAGTCCTTGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CCA 90 bp TCGCCTGAAGAGTGGGTAGATTGTATCTCAGTTATCTTGGTCCCATaGAGGATTAGGCTGTATCTATTCTGGCAGGCGTCGTGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SPEEWVDCISVILVP*RIRLYLFWQASCKF
Trigger: AAACTTGCACGACGCCTGCCAGAATAGATACAGCCTAATCCTCCATGGGACCAAGATAACTGAGATACAATCTACCCACTCTTCAGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS-3UTR CAA 90 bp TGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGATCTCTGCAGATCACTaGGTAAGATCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CAFAVSSEEEEAGSHLLLISADH*VRSGSS
Trigger: AGAGGAGCCAGATCTTACCAAGTGATCTGCAGAGAT...CAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GAGAAGTCTGTAGAGAAGCACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGATCTCTGCAGATCACTaGGTAAGATCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EKSVEKHCAFAVSSEEEEISADH*VRSGSS
Trigger: AGAGGAGCCAGATCTTACCAAGTGATCTGCAGAGAT...CTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCTCTACAGACTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp CTAGCCCATTGCCTTGTATGTTACAGGTGTTGTGTATATGTTAAGCGAGTGAAGGGTCACGGTCGCATGTaGTCACGAATCCAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: LAHCLVCYRCCVYVKRVKGHGRM*SRIQSR
Trigger: CCTAGACTGGATTCGTGACAACATGCGACCGTGACC...CTTCACTCGCTTAACATATACACAACACCTGTAACATACAAGGCAATGGGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220809.9
CDS-3UTR CAA 90 bp CAGCAGCGCAATGTCATTGTCGTAAGTGTCATCATCGAATTCCTTATGGACAATGAGGCGGGATCTCATTaGCTTTTGAGGAGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: QQRNVIVVSVIIEFLMDNEAGSH*LLRSRV
Trigger: CACCCGACTCCTCAAAAGCAAATGAGATCCCGCCTC...ATTGTCCATAAGGAATTCGATGATGACACTTACGACAATGACATTGCGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000678676.1
CDS TCA 90 bp TGCATGTGGGTGTGTTGTGTGATCTGTATGAACTGGAGCCGGGAATaGCGAGCTCTTACCAATGTCATTGTCGTAAGTGTCATCATCGAA +
Preference number: 5 (lower is better)
Translates to: CMWVCCVICMNWSRE*RALTNVIVVSVIIE
Trigger: TTCGATGATGACACTTACGACAATGACATTGGTAAGAGCTCGTCATTCCCGGCTCCAGTTCATACAGATCACACAACACACCCACATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522812.1
CDS GCA 90 bp GAATACAGCCTTTTGTCTCTTATCTACCTATGGCCTGGAAGCCCTTaGTTCGAGTTATCCCAACTTTCCCGACCAAACCGATGTACATCT +
Preference number: 5 (lower is better)
Translates to: EYSLLSLIYLWPGSP*FELSQLSRPNRCTS
Trigger: AGATGTACATCGGTTTGGTCGGGAAAGTTGGGATAACTCGAAGCAAGGGCTTCCAGGCCATAGGTAGATAAGAGACAAAAGGCTGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 90 bp TTGGAGGTGAAGGATGGTTTAAGGAGATGCACATGGGTGCCAAATTaGCAAGGTGTGGACTGGAATAGTCTTATATGTCAACTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LEVKDGLRRCTWVPN*QGVDWNSLICQLGQ
Trigger: CTGGCCAAGTTGACATATAAGACTATTCCAGTCCACACCTTGTCAATTTGGCACCCATGTGCATCTCCTTAAACCATCCTTCACCTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS-3UTR CAA 90 bp ATGTCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCAGAAGCACTGCGCCTTaGCAGTGTCTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: MSSHLTEYPEIRPSPENFRSTAP*QCLLKK
Trigger: CTTCTTCAGAAGACACTGCAAAGGCGCAGTGCTTCT...GAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp TCTTCCCATCTGACAGAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAACGTAGCACCAGGGCTTaGAGTCTATTTCACAGCACT +
Preference number: 5 (lower is better)
Translates to: SSHLTEYPEIRPSPENFQRSTRA*SLFHST
Trigger: AGTGCTGTGAAATAGACTCAAAGCCCTGGTGCTACG...TTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTCTGTCAGATGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519510.5
CDS GCA 90 bp GTTATTCTAGCAAGTGAAGAGGTTGGATTAGATAATATCCATGGGTaGTTCCCACGCACTGGGTCTGTCATGCAACTTGAGACATTGGAT +
Preference number: 5 (lower is better)
Translates to: VILASEEVGLDNIHG*FPRTGSVMQLETLD
Trigger: ATCCAATGTCTCAAGTTGCATGACAGACCCAGTGCGTGGGAAGCACCCATGGATATTATCTAATCCAACCTCTTCACTTGCTAGAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS-3UTR CAA 90 bp CACTGCGCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTCAGTATAAAACAGGGTaGTGGCAACAGAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: HCAFAVSSEEEEAGSHLLQYKTG*WQQKVK
Trigger: TTTTACTTTCTGTTGCCACAACCCTGTTTTATACTG...AAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGCGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS-3UTR CAA 90 bp GAGTATCCTGAAATCAGACCAAGTCCTGAAAACTTCCAAAATGGGAAGTATCTGATCTCTGCAGATCACTaGGTAAGATCTGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EYPEIRPSPENFQNGKYLISADH*VRSGSS
Trigger: AGAGGAGCCAGATCTTACCAAGTGATCTGCAGAGAT...CAGATACTTCCCATTTTGGAAGTTTTCAGGACTTGGTCTGATTTCAGGATACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS-3UTR CAA 90 bp GCCTTTGCAGTGTCTTCTGAAGAAGAAGAGGCGGGATCTCATTTGCTTTTGAGGCAGTATAAAACAGGGTaGTGGCAACAGAAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: AFAVSSEEEEAGSHLLLRQYKTG*WQQKVK
Trigger: TTTTACTTTCTGTTGCCACAACCCTGTTTTATACTG...CCTCAAAAGCAAATGAGATCCCGCCTCTTCTTCTTCAGAAGACACTGCAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
CDS CCA 90 bp CAAATCATTGCAATAAAGATGTCAGGAGAACAGCTGAGGACTAAATaGTTACAGGCCAGGACCCTTAACTTGGGATTTAGGTTGGAAAAC +
Preference number: 5 (lower is better)
Translates to: QIIAIKMSGEQLRTK*LQARTLNLGFRLEN
Trigger: GTTTTCCAACCTAAATCCCAAGTTAAGGGTCCTGGCCTGTAACCATTTAGTCCTCAGCTGTTCTCCTGACATCTTTATTGCAATGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS GCA 90 bp CCCTTAAATTATCCTAGAAGTGGAATGAGACAGTGTTTCTTCTTTTaGGACTGGTTTGTTTCACTTTGCAAATGTCTTCAAGGTGCATCC +
Preference number: 5 (lower is better)
Translates to: PLNYPRSGMRQCFFF*DWFVSLCKCLQGAS
Trigger: GGATGCACCTTGAAGACATTTGCAAAGTGAAACAAACCAGTCGCAAAAGAAGAAACACTGTCTCATTCCACTTCTAGGATAATTTAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520523.5
CDS CCA 90 bp AATTATCCTAGAAGTGGAATGAGACAGTGTTTCTTCTTTTGCGACTaGTTTGTTTCACTTTGCAAATGTCTTCAAGGTGCATCCATGCTG +
Preference number: 5 (lower is better)
Translates to: NYPRSGMRQCFFFCD*FVSLCKCLQGASML
Trigger: CAGCATGGATGCACCTTGAAGACATTTGCAAAGTGAAACAAACCAGTCGCAAAAGAAGAAACACTGTCTCATTCCACTTCTAGGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520523.5
CDS GCA 72 bp GCCTCCGCCCGCTGTAGGGCTTCTGGGCCAACGCGCTaGTGTTCCAGTTGGTGCACTCGGCGCCACTCTCCG +
Preference number: 6 (lower is better)
Translates to: ASARCRASGPTR*CSSWCTRRHSP
Trigger: CGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGAAGCCCTACAGCGGGCGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 72 bp GTAGTTGTGGTTCCCCAGGCCCAGCCTGATGGCGTCTaGCCTCCGCCCGCTGTAGGGCTTCTGGGCCAACGC +
Preference number: 6 (lower is better)
Translates to: VVVVPQAQPDGV*PPPAVGLLGQR
Trigger: GCGTTGGCCCAGAAGCCCTACAGCGGGCGGAGGCCAGACGCCATCAGGCTGGGCCTGGGGAACCACAACTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS GCA 72 bp AGGGCTTCTGGGCCAACGCGCTGCTGTTCCAGTTGGTaGACTCGGCGCCACTCTCCGCTGTGCTCCACGTGC +
Preference number: 6 (lower is better)
Translates to: RASGPTRCCSSW*TRRHSPLCSTC
Trigger: GCACGTGGAGCACAGCGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGAAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 72 bp CGCCACTCTCCGCTGTGCTCCACGTGCCCCTGTAGCTaGTGCCCTGGTCCTCGTAGCACGTGGCCCTGGTAT +
Preference number: 6 (lower is better)
Translates to: RHSPLCSTCPCS*CPGPRSTWPWY
Trigger: ATACCAGGGCCACGTGCTACGAGGACCAGGGCATCAGCTACAGGGGCACGTGGAGCACAGCGGAGAGTGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000521694.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 72 bp TGTAGGGCTTCTGGGCCAACGCGCTGCTGTTCCAGTTaGTGCACTCGGCGCCACTCTCCGCTGTGCTCCACG +
Preference number: 6 (lower is better)
Translates to: CRASGPTRCCSS*CTRRHSPLCST
Trigger: CGTGGAGCACAGCGGAGAGTGGCGCCGAGTGCACCAACTGGAACAGCAGCGCGTTGGCCCAGAAGCCCTACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000520523.5
ENST00000521042.1
ENST00000521647.1
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 72 bp CTGTATCTATTCTGGCAGGCGTCGTGCAAGTTTGCCTaGGGCCCGCCGCTCCGAGTGTCTCCAGCACACAGC +
Preference number: 6 (lower is better)
Translates to: LYLFWQASCKFA*GPPLRVSPAHS
Trigger: GCTGTGTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGAATAGATACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS TCA 72 bp CCCAGCAAATCCTTCGGGGCACTGGCACACGAAATCTaGGAAGTACAGGGCCTGCTGGCAGGTGCCCCCGTT +
Preference number: 6 (lower is better)
Translates to: PSKSFGALAHEI*EVQGLLAGAPV
Trigger: AACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATTTGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000520523.5
ENST00000521647.1
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 72 bp GCGATGTCGGCGAAGAGCCCTCCTTTGATGCGAAACTaGGGCTGGCTGTACTGTCTCAGGCCGCAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: AMSAKSPPLMRN*GWLYCLRPQVA
Trigger: AGCCACCTGCGGCCTGAGACAGTACAGCCAGCCTCAGTTTCGCATCAAAGGAGGGCTCTTCGCCGACATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522812.1
CDS GCA 72 bp GGGCACTGGCACACGAAATCTGAGAAGTACAGGGCCTaGTGGCAGGTGCCCCCGTTGAAACACCTTGGCTCG +
Preference number: 6 (lower is better)
Translates to: GHWHTKSEKYRA*WQVPPLKHLGS
Trigger: CGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000520523.5
ENST00000521647.1
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 72 bp CAGGGCCTGCTGGCAGGTGCCCCCGTTGAAACACCTTaGCTCGCTGCAACCTTGGTAAGATCTGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: QGLLAGAPVETP*LAATLVRSGSS
Trigger: AGAGGAGCCAGATCTTACCAAGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS CCA 72 bp GCAACAGAGGAGGATAAGCCGCAATGTTGTCCTGTCTaGCTTCCTCCAGTGCCAGCCCCGCGGCAGAAACGC +
Preference number: 6 (lower is better)
Translates to: ATEEDKPQCCPV*LPPVPAPRQKR
Trigger: GCGTTTCTGCCGCGGGGCTGGCACTGGAGGAAGCCAGACAGGACAACATTGCGGCTTATCCTCCTCTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS CAA 72 bp TTAGGCTGTATCTATTCTGGCAGGCGTCGTGCAAGTTaGCCTGGGGCCCGCCGCTCCGAGTGTCTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: LGCIYSGRRRAS*PGARRSECLQH
Trigger: GTGCTGGAGACACTCGGAGCGGCGGGCCCCAGGCAAACTTGCACGACGCCTGCCAGAATAGATACAGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS TCA 72 bp ACCCGACTCGGTGAGGCTGTGCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCAGTCACTGTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: TRLGEAVRATVG*PIPKVAVTVSL
Trigger: GAGGGAAACAGTGACTGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACGCACAGCCTCACCGAGTCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000524261.1
ENST00000677722.1
ENST00000678083.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 72 bp ACCCGACTCGGTGAGGCTGTGCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCAGTCACTGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: TRLGEAVRATVG*PIPKVAVTVSC
Trigger: GCAGGAAACAGTGACTGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACGCACAGCCTCACCGAGTCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678676.1
CDS GCA 72 bp CTTCCCTCCCTCCCTTCCTCTCTCCCTCCCACGGCTTaGTCCTTCCCTTTCCTCGCAGAGGTTTTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LPSLPSSLPPTA*SFPFLAEVFSP
Trigger: TGGAGAGAAAACCTCTGCGAGGAAAGGGAAGGAGCAAGCCGTGGGAGGGAGAGAGGAAGGGAGGGAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS CCA 72 bp CACTGGCACACGAAATCTGAGAAGTACAGGGCCTGCTaGCAGGTGCCCCCGTTGAAACACCTTGGCTCGCTG +
Preference number: 6 (lower is better)
Translates to: HWHTKSEKYRAC*QVPPLKHLGSL
Trigger: CAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000520523.5
ENST00000521647.1
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 72 bp ACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTGGTaGGGCGGAAACCTGGTGGAGAAACAGCCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: TRYVLPKITVRW*GGNLVEKQPLL
Trigger: CAGGAGAGGCTGTTTCTCCACCAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS CCA 72 bp ACCACCCGGTATGTTCTGCCCAAGATCACCGTCAGGTaGTGGGGCGGAAACCTGGTGGAGAAACAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: TTRYVLPKITVR*WGGNLVEKQPL
Trigger: GAGAGGCTGTTTCTCCACCAGGTTTCCGCCCCACCACCTGACGGTGATCTTGGGCAGAACATACCGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS CAA 72 bp TCTTCCCTCCCTCCCTTCCTCTCTCCCTCCCACGGCTaGCTCCTTCCCTTTCCTCGCAGAGGTTTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSLPPFLSPSHG*LLPFPRRGFLS
Trigger: GGAGAGAAAACCTCTGCGAGGAAAGGGAAGGAGCAAGCCGTGGGAGGGAGAGAGGAAGGGAGGGAGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS CAA 90 bp GTGTTTTCGTCTTCCCTCCCTCCCTTCCTCTCTCCCTCCCACGGCTaGCTCCTTCCCTTTCCTCGCAGAGGTTTTCTCTCCAGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: VFSSSLPPFLSPSHG*LLPFPRRGFLSSPG
Trigger: TCCAGGGCTGGAGAGAAAACCTCTGCGAGGAAAGGGAAGGAGCAAGCCGTGGGAGGGAGAGAGGAAGGGAGGGAGGGAAGACGAAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS CAA 90 bp CTGCAACTTTTGACAGGCACTGAGTGGCACTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACCCGGTTGCTTCTGAGCACAGGGCGC +
Preference number: 6 (lower is better)
Translates to: LQLLTGTEWHCALPL*HQQYSTRLLLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000519510.5
ENST00000520523.5
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 72 bp CTGAGAAGTACAGGGCCTGCTGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGCAACCTTGGTAAGATC +
Preference number: 6 (lower is better)
Translates to: LRSTGPAGRCPR*NTLARCNLGKI
Trigger: GATCTTACCAAGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS GCA 72 bp ATAAGCCGCAATGTTGTCCTGTCTGGCTTCCTCCAGTaGCAGCCCCGCGGCAGAAACGCCAGACATGCATCT +
Preference number: 6 (lower is better)
Translates to: ISRNVVLSGFLQ*QPRGRNARHAS
Trigger: AGATGCATGTCTGGCGTTTCTGCCGCGGGGCTGGCACTGGAGGAAGCCAGACAGGACAACATTGCGGCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678083.1
CDS CAA 90 bp CTGTTTCTTTTGACAGGCACTGAGTGGCACTGTGCCCTGCCACTGTaGCACCAGCAATATTCCACCCGGTTGCTTCTGAGCACAGGGCGC +
Preference number: 6 (lower is better)
Translates to: LFLLTGTEWHCALPL*HQQYSTRLLLSTGR
Trigger: GCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTGCTGGTGCAACAGTGGCAGGGCACAGTGCCACTCAGTGCCTGTCAAAAGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429710.6
CDS CAA 90 bp CATGACTCCCTAAAACGTCTAAAGGCAAGCTGTGCCCTGACAACCTaGGGCACATGTCCTCAGGACCTCCTGAGGCTGTGTCACGGGGGT +
Preference number: 6 (lower is better)
Translates to: HDSLKRLKASCALTT*GTCPQDLLRLCHGG
Trigger: ACCCCCGTGACACAGCCTCAGGAGGTCCTGAGGACATGTGCCCAAGGTTGTCAGGGCACAGCTTGCCTTTAGACGTTTTAGGGAGTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp CTGAGAAGTACAGGGCCTGCTGGCAGGTGCCCCCGTTaGAACACCTTGGCTCGCTGCAACCTGTCAAGTATA +
Preference number: 6 (lower is better)
Translates to: LRSTGPAGRCPR*NTLARCNLSSI
Trigger: TATACTTGACAGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp ACCCGACTCGGTGAGGCTGTGCGTGCCACGGTAGGCTaGCCCATTCCCAAAGTAGCAGTCACTGTTTCCTAT +
Preference number: 6 (lower is better)
Translates to: TRLGEAVRATVG*PIPKVAVTVSY
Trigger: ATAGGAAACAGTGACTGCTACTTTGGGAATGGGTCAGCCTACCGTGGCACGCACAGCCTCACCGAGTCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524009.5
CDS CCA 72 bp AGCGGCGCATCTCCTCTCACTGCAACCTCCGTTTCCTaGATTTGGGCAATTCTTCAGCCTCAGCTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: SGASPLTATSVS*IWAILQPQLPE
Trigger: CTCGGGAAGCTGAGGCTGAAGAATTGCCCAAATCCAGGAAACGGAGGTTGCAGTGAGAGGAGATGCGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 72 bp TCTGAGAAGTACAGGGCCTGCTGGCAGGTGCCCCCGTaGAAACACCTTGGCTCGCTGCAACCTGTCAAGTAT +
Preference number: 6 (lower is better)
Translates to: SEKYRACWQVPP*KHLGSLQPVKY
Trigger: ATACTTGACAGGTTGCAGCGAGCCAAGGTGTTTCAACGGGGGCACCTGCCAGCAGGCCCTGTACTTCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 90 bp CATGGGTGCTTCCCACGCACTGGGTCTGTCATGCAACTTGAGACATaGGATCTTCCCCCGTCTCACACCCTAATCCCACGTTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: HGCFPRTGSVMQLET*DLPPSHTLIPRSAK
Trigger: CTTGGCAGAACGTGGGATTAGGGTGTGAGACGGGGGAAGATCCAATGTCTCAAGTTGCATGACAGACCCAGTGCGTGGGAAGCACCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS TCA 72 bp CACTGTTGCACCAGCAATATTCCACCCGGTTGCTTCTaGGCACAGGGCGCAGCCATGACTGATGTTGCTGGT +
Preference number: 6 (lower is better)
Translates to: HCCTSNIPPGCF*AQGAAMTDVAG
Trigger: ACCAGCAACATCAGTCATGGCTGCGCCCTGTGCTCAGAAGCAACCGGGTGGAATATTGCTGGTGCAACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000520523.5
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 72 bp GCTCGCTGCAACCTTGGTAAGATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCTGGCTGGGCGAAACGA +
Preference number: 6 (lower is better)
Translates to: ARCNLGKIWLLF*IGHGFPGWAKR
Trigger: TCGTTTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGATCTTACCAAGGTTGCAGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352041.7
CDS GCA 72 bp GAGGCAAGCGGGCATTTGCCCAAGGTCACTTGGTCTTaGTCCCTTTTCTGCTTGTACCTTCACCTCCGCCTA +
Preference number: 6 (lower is better)
Translates to: EASGHLPKVTWS*SLFCLYLHLRL
Trigger: TAGGCGGAGGTGAAGGTACAAGCAGAAAAGGGAGCAAGACCAAGTGACCTTGGGCAAATGCCCGCTTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp TGGGTGCTTCCCACGCACTGGGTCTGTCATGCAACTTaGGACATTGGATCTTCCCCCGTCTCACACCCTAAT +
Preference number: 6 (lower is better)
Translates to: WVLPTHWVCHAT*DIGSSPVSHPN
Trigger: ATTAGGGTGTGAGACGGGGGAAGATCCAATGTCTCAAGTTGCATGACAGACCCAGTGCGTGGGAAGCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS CCA 72 bp ATTTCACAGCACTTCCCAGCAAATCCTTCGGGGCACTaGCACACGAAATCTGAGAAGTACAGGGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ISQHFPANPSGH*HTKSEKYRACW
Trigger: CCAGCAGGCCCTGTACTTCTCAGATTTCGTGTGCCAGTGCCCCGAAGGATTTGCTGGGAAGTGCTGTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000519510.5
ENST00000520523.5
ENST00000521647.1
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS CCA 72 bp TGCATCCATGATTGCTTCACAGCGTCCCTTAAATTCTaGGACCTCGGCGTGTTTTCGTCTTCCCTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: CIHDCFTASLKF*DLGVFSSSLPP
Trigger: GGGAGGGAGGGAAGACGAAAACACGCCGAGGTCCCAGAATTTAAGGGACGCTGTGAAGCAATCATGGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS CAA 72 bp TTCCCACGCACTGGGTCTGTCATGCAACTTGAGACATaGGATCTTCCCCCGTCTCACACCCTAATCCCACGT +
Preference number: 6 (lower is better)
Translates to: FPRTGSVMQLET*DLPPSHTLIPR
Trigger: ACGTGGGATTAGGGTGTGAGACGGGGGAAGATCCAATGTCTCAAGTTGCATGACAGACCCAGTGCGTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS CAA 72 bp CTAAAACGTCTAAAGGCAAGCTGTGCCCTGACAACCTaGGGCACATGTCCTCAGGACCTCCTGAGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: LKRLKASCALTT*GTCPQDLLRLC
Trigger: ACACAGCCTCAGGAGGTCCTGAGGACATGTGCCCAAGGTTGTCAGGGCACAGCTTGCCTTTAGACGTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 72 bp GTCAGCCTGCGGTTCTTCAGCACGTGGCACCAGGGCTaGGCATCCCCATCAGGATTCCTAAATGATAAGAGA +
Preference number: 6 (lower is better)
Translates to: VSLRFFSTWHQG*ASPSGFLNDKR
Trigger: TCTCTTATCATTTAGGAATCCTGATGGGGATGCCAAGCCCTGGTGCCACGTGCTGAAGAACCGCAGGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677722.1
CDS TCA 72 bp CTCTGCAGATCACTTGGTAAGATCTGGCTCCTCTTCTaGATCGGGCATGGATTTCCTGGCTGGGCGAAACGA +
Preference number: 6 (lower is better)
Translates to: LCRSLGKIWLLF*IGHGFPGWAKR
Trigger: TCGTTTCGCCCAGCCAGGAAATCCATGCCCGATTCAGAAGAGGAGCCAGATCTTACCAAGTGATCTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000220809.9
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000520523.5
ENST00000521694.1
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS TCA 72 bp ATTCAGCCCCATCCTCTCCTCCATAGAGGAGGAAATTaGGGGTCAGAGTGTGAGGAGATCAGCTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: IQPHPLLHRGGN*GSECEEISSRS
Trigger: TGACCTGGAGCTGATCTCCTCACACTCTGACCCTCAATTTCCTCCTCTATGGAGGAGAGGATGGGGCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS GCA 72 bp CACACAGCAGAGCCCTCTCTTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAATTCTGGGACCTCGGC +
Preference number: 6 (lower is better)
Translates to: HTAEPSLHCIHD*FTASLKFWDLG
Trigger: GCCGAGGTCCCAGAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429089.6
CDS GCA 72 bp ATATCCATGGGTGCTTCCCACGCACTGGGTCTGTCATaGAACTTGAGACATTGGATCTTCCCCCGTCTCACA +
Preference number: 6 (lower is better)
Translates to: ISMGASHALGLS*NLRHWIFPRLT
Trigger: TGTGAGACGGGGGAAGATCCAATGTCTCAAGTTGCATGACAGACCCAGTGCGTGGGAAGCACCCATGGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS CCA 72 bp GAAACTGAGGCAAGCGGGCATTTGCCCAAGGTCACTTaGTCTTGCTCCCTTTTCTGCTTGTACCTTCACCTC +
Preference number: 6 (lower is better)
Translates to: ETEASGHLPKVT*SCSLFCLYLHL
Trigger: GAGGTGAAGGTACAAGCAGAAAAGGGAGCAAGACCAAGTGACCTTGGGCAAATGCCCGCTTGCCTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 90 bp CCTCCCGAATCGCCTGAAGAGTGGGTAGATTGTATCTCAGTTATCTaGGTCCCATGGAGGATTAGGCTGTATCTATTCTGGCAGGCGTCG +
Preference number: 6 (lower is better)
Translates to: PPESPEEWVDCISVI*VPWRIRLYLFWQAS
Trigger: CGACGCCTGCCAGAATAGATACAGCCTAATCCTCCATGGGACCAAGATAACTGAGATACAATCTACCCACTCTTCAGGCGATTCGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS TCA 72 bp AAATCAGCCAAGGGAAGGGCCAGGGTAGGTCAAAGGTaGAGCCTCTCCTTTAGGACCCAAGGACTTTGGTAT +
Preference number: 6 (lower is better)
Translates to: KSAKGRARVGQR*SLSFRTQGLWY
Trigger: ATACCAAAGTCCTTGGGTCCTAAAGGAGAGGCTTCACCTTTGACCTACCCTGGCCCTTCCCTTGGCTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp GGCCATGTAAGAGTAGAAGGAGACTCAGTCAACCAATaGAAACCACTGAGCTGGGAGGGAGGACACCGAGTT +
Preference number: 6 (lower is better)
Translates to: GHVRVEGDSVNQ*KPLSWEGGHRV
Trigger: AACTCGGTGTCCTCCCTCCCAGCTCAGTGGTTTTCATTGGTTGACTGAGTCTCCTTCTACTCTTACATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677722.1
CDS GCA 72 bp CACACAGCAGAGCCCTCTCTTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAATTCACGGCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: HTAEPSLHCIHD*FTASLKFTACS
Trigger: GGAGCAAGCCGTGAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000677722.1
ENST00000678676.1
ENST00000679300.1
CDS GCA 72 bp AAATTCTGCCTTAAGAGAGCAGCCTCAGCTTCTGCCTaGACTTCCAGCCTGGCTTACCAAGATGTTTCGGAC +
Preference number: 6 (lower is better)
Translates to: KFCLKRAASASA*TSSLAYQDVSD
Trigger: GTCCGAAACATCTTGGTAAGCCAGGCTGGAAGTGCAGGCAGAAGCTGAGGCTGCTCTCTTAAGGCAGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS GCA 72 bp ACACAGCAGCAGCACACAGCAGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACAGCGTCCCTTAAATTC +
Preference number: 6 (lower is better)
Translates to: TQQQHTAEPSLH*IHDCFTASLKF
Trigger: GAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTGCTGCTGCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000220809.9
ENST00000352041.7
ENST00000429089.6
ENST00000429710.6
ENST00000519510.5
ENST00000524009.5
ENST00000677722.1
ENST00000678083.1
ENST00000678676.1
ENST00000679151.1
ENST00000679300.1
CDS GCA 72 bp GCAAGTGAAGAGGTTGGATTAGATAATATCCATGGGTaGTTCCCACGCACTGGGTCTGTCATGCAACTTGAG +
Preference number: 6 (lower is better)
Translates to: ASEEVGLDNIHG*FPRTGSVMQLE
Trigger: CTCAAGTTGCATGACAGACCCAGTGCGTGGGAAGCACCCATGGATATTATCTAATCCAACCTCTTCACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS GCA 72 bp ACACAGCAGCAGCACACAGCAGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACAGCGTCCCTTAAATTA +
Preference number: 6 (lower is better)
Translates to: TQQQHTAEPSLH*IHDCFTASLKL
Trigger: TAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTGCTGCTGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520523.5
CDS GCA 72 bp ACACAGCAGCAGCACACAGCAGAGCCCTCTCTTCATTaGATCCATGATTGCTTCACAGCGTCCCTTAAATTT +
Preference number: 6 (lower is better)
Translates to: TQQQHTAEPSLH*IHDCFTASLKF
Trigger: AAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTGCTGCTGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521694.1
CDS GCA 72 bp CAAGTCCTGCAGCGTGGAACACGCGTATACCAGTTCTaGATCCTACAAATACTGTTTTCATCCTGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: QVLQRGTRVYQF*ILQILFSSCLW
Trigger: CCAAAGGCAGGATGAAAACAGTATTTGTAGGATGCAGAACTGGTATACGCGTGTTCCACGCTGCAGGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS GCA 72 bp CTTTTGTCTCTTATCTACCTATGGCCTGGAAGCCCTTaGTTCGAGTTATCCCAACTTTCCCGACCAAACCGA +
Preference number: 6 (lower is better)
Translates to: LLSLIYLWPGSP*FELSQLSRPNR
Trigger: TCGGTTTGGTCGGGAAAGTTGGGATAACTCGAAGCAAGGGCTTCCAGGCCATAGGTAGATAAGAGACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS GCA 72 bp CACACAGCAGAGCCCTCTCTTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAATTCTGGAAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: HTAEPSLHCIHD*FTASLKFWKER
Trigger: TCTCTCCTTCCAGAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678083.1
ENST00000679151.1
CDS CCA 72 bp TCTACCACAATCCACACACACTCAAGTCCTGCAGCGTaGAACACGCGTATACCAGTTCTGCATCCTACAAAT +
Preference number: 6 (lower is better)
Translates to: STTIHTHSSPAA*NTRIPVLHPTN
Trigger: ATTTGTAGGATGCAGAACTGGTATACGCGTGTTCCACGCTGCAGGACTTGAGTGTGTGTGGATTGTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CCA 72 bp GAGTGGGTAGATTGTATCTCAGTTATCTTGGTCCCATaGAGGATTAGGCTGTATCTATTCTGGCAGGCGTCG +
Preference number: 6 (lower is better)
Translates to: EWVDCISVILVP*RIRLYLFWQAS
Trigger: CGACGCCTGCCAGAATAGATACAGCCTAATCCTCCATGGGACCAAGATAACTGAGATACAATCTACCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS CAA 72 bp TCCATACATAAGTGGACCCTGCAGGTCAGACAAGTGTaGTTCAAGGGTCCCCTGTATTTTCAAAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SIHKWTLQVRQV*FKGPLYFQSSS
Trigger: GGAGCTGCTTTGAAAATACAGGGGACCCTTGAACAACACTTGTCTGACCTGCAGGGTCCACTTATGTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp TGTGAAAGGAAAATAAATCTCAGGACCCCAACGTCATaGGCCAAGGGAAATGTCAAGCCGGGAACTACGTCA +
Preference number: 6 (lower is better)
Translates to: CERKINLRTPTS*AKGNVKPGTTS
Trigger: TGACGTAGTTCCCGGCTTGACATTTCCCTTGGCTCATGACGTTGGGGTCCTGAGATTTATTTTCCTTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp GTGTGTTGTGTGATCTGTATGAACTGGAGCCGGGAATaGCGAGCTCTTACCAATGTCATTGTCGTAAGTGTC +
Preference number: 6 (lower is better)
Translates to: VCCVICMNWSRE*RALTNVIVVSV
Trigger: GACACTTACGACAATGACATTGGTAAGAGCTCGTCATTCCCGGCTCCAGTTCATACAGATCACACAACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522812.1
CDS GCA 72 bp CACACAGCAGAGCCCTCTCTTCATTGCATCCATGATTaGTTCACAGCGTCCCTTAAATTTCCAGATCTTCTC +
Preference number: 6 (lower is better)
Translates to: HTAEPSLHCIHD*FTASLKFPDLL
Trigger: GAGAAGATCTGGAAATTTAAGGGACGCTGTGAAGCAATCATGGATGCAATGAAGAGAGGGCTCTGCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521694.1
CDS CCA 72 bp AGAATACAGCCTTTTGTCTCTTATCTACCTATGGCCTaGAAGCCCTTGCTTCGAGTTATCCCAACTTTCCCG +
Preference number: 6 (lower is better)
Translates to: RIQPFVSYLPMA*KPLLRVIPTFP
Trigger: CGGGAAAGTTGGGATAACTCGAAGCAAGGGCTTCCAGGCCATAGGTAGATAAGAGACAAAAGGCTGTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS GCA 72 bp TTATCTTCCCAGGTGCAGGACAGAAAATCATCCCTCTaGTCATCTGAGACAAATGCGTATCTGATTGCTTCC +
Preference number: 6 (lower is better)
Translates to: LSSQVQDRKSSL*SSETNAYLIAS
Trigger: GGAAGCAATCAGATACGCATTTGTCTCAGATGAGCAGAGGGATGATTTTCTGTCCTGCACCTGGGAAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS GCA 72 bp CCTTGGCATTGTAAATGGATAGCTTATCTTCCCAGGTaGAGGACAGAAAATCATCCCTCTGCTCATCTGAGA +
Preference number: 6 (lower is better)
Translates to: PWHCKWIAYLPR*RTENHPSAHLR
Trigger: TCTCAGATGAGCAGAGGGATGATTTTCTGTCCTGCACCTGGGAAGATAAGCTATCCATTTACAATGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CCA 72 bp GCAATAAAGATGTCAGGAGAACAGCTGAGGACTAAATaGTTACAGGCCAGGACCCTTAACTTGGGATTTAGG +
Preference number: 6 (lower is better)
Translates to: AIKMSGEQLRTK*LQARTLNLGFR
Trigger: CCTAAATCCCAAGTTAAGGGTCCTGGCCTGTAACCATTTAGTCCTCAGCTGTTCTCCTGACATCTTTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524261.1
ENST00000677722.1
CDS CAA 72 bp TCGCCTGAAGAGTGGGTAGATTGTATCTCAGTTATCTaGGTCCCATGGAGGATTAGGCTGTATCTATTCTGG +
Preference number: 6 (lower is better)
Translates to: SPEEWVDCISVI*VPWRIRLYLFW
Trigger: CCAGAATAGATACAGCCTAATCCTCCATGGGACCAAGATAACTGAGATACAATCTACCCACTCTTCAGGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679300.1
CDS CAA 90 bp CACGGGGGTGTCCTTAACCTTGGCAAAATCAACTTTCTAAATCGATaGAGACCTGTCTCAGATACTTTGGGTTCACACACATTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: HGGVLNLGKINFLNR*RPVSDTLGSHTFSL
Trigger: GAGAGAGAATGTGTGTGAACCCAAAGTATCTGAGACAGGTCTCAATCGATTTAGAAAGTTGATTTTGCCAAGGTTAAGGACACCCCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp GCAGATGAACTGAGCCAGACTCAATTGTGTGTTCAGTaGAAAGCTGATCAAGGACTCAGAATACAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: ADELSQTQLCVQ*KADQGLRIQPF
Trigger: AAAAGGCTGTATTCTGAGTCCTTGATCAGCTTTTCACTGAACACACAATTGAGTCTGGCTCAGTTCATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 72 bp ACAGTGTTTCTTCTTTTGCGACTGGTTTGTTTCACTTaGCAAATGTCTTCAAGGTGCATCCATGCTGTAGCA +
Preference number: 6 (lower is better)
Translates to: TVFLLLRLVCFT*QMSSRCIHAVA
Trigger: TGCTACAGCATGGATGCACCTTGAAGACATTTGCAAAGTGAAACAAACCAGTCGCAAAAGAAGAAACACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520523.5
CDS CAA 90 bp TGGAATGAGACAGTGTTTCTTCTTTTGCGACTGGTTTGTTTCACTTaGCAAATGTCTTCAAGGTGCATCCATGCTGTAGCATGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: WNETVFLLLRLVCFT*QMSSRCIHAVACPF
Trigger: AAAAGGACATGCTACAGCATGGATGCACCTTGAAGACATTTGCAAAGTGAAACAAACCAGTCGCAAAAGAAGAAACACTGTCTCATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520523.5
CDS CAA 90 bp GGCAAAATCAACTTTCTAAATCGATTGAGACCTGTCTCAGATACTTaGGGTTCACACACATTCTCTCTCTCTCTCTATTTCTCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: GKINFLNRLRPVSDT*GSHTFSLSLYFSLL
Trigger: GAGGAGAGAGAAATAGAGAGAGAGAGAGAATGTGTGTGAACCCAAAGTATCTGAGACAGGTCTCAATCGATTTAGAAAGTTGATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp TCACTTAAAGGCCTTAAGAGCAAATATGAGGTTTCCTaGATAAGAAATTCTGCCTTAAGAGAGCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: SLKGLKSKYEVS*IRNSALREQPQ
Trigger: CTGAGGCTGCTCTCTTAAGGCAGAATTTCTTATTCAGGAAACCTCATATTTGCTCTTAAGGCCTTTAAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 72 bp GTCCTTAACCTTGGCAAAATCAACTTTCTAAATCGATaGAGACCTGTCTCAGATACTTTGGGTTCACACACA +
Preference number: 6 (lower is better)
Translates to: VLNLGKINFLNR*RPVSDTLGSHT
Trigger: TGTGTGTGAACCCAAAGTATCTGAGACAGGTCTCAATCGATTTAGAAAGTTGATTTTGCCAAGGTTAAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS TCA 72 bp GCAGGCCTAAAGATCTTTACCCTAAAACAGTTCTGTTaGCTTTCACCTTGGCATTGTAAATGGATAGCTTAT +
Preference number: 6 (lower is better)
Translates to: AGLKIFTLKQFC*LSPWHCKWIAY
Trigger: ATAAGCTATCCATTTACAATGCCAAGGTGAAAGTCAACAGAACTGTTTTAGGGTAAAGATCTTTAGGCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 72 bp AACTTTCTAAATCGATTGAGACCTGTCTCAGATACTTaGGGTTCACACACATTCTCTCTCTCTCTCTATTTC +
Preference number: 6 (lower is better)
Translates to: NFLNRLRPVSDT*GSHTFSLSLYF
Trigger: GAAATAGAGAGAGAGAGAGAATGTGTGTGAACCCAAAGTATCTGAGACAGGTCTCAATCGATTTAGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521647.1
CDS CAA 72 bp AAAATATTAAGAATGTGCTCTATGTGCCAGGCGCTGTaGTACAGTCTACAAAAATTAGCTAATTTAATCCTC +
Preference number: 6 (lower is better)
Translates to: KILRMCSMCQAL*YSLQKLANLIL
Trigger: GAGGATTAAATTAGCTAATTTTTGTAGACTGTACAACAGCGCCTGGCACATAGAGCACATTCTTAATATTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521647.1