RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLAG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000181690

Ensembl transcript IDs: ENST00000316981.8, ENST00000423799.6, ENST00000429357.2, ENST00000519027.1, ENST00000522009.1

Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGAGGCTGAGTCAATCCACTGTGGGATAAACACACCTCATGGCTaGAGTTCCACAATGGCTCTAGATTATGGACTAACCGTGGGCCAA +
Preference number: 1 (lower is better)
Translates to: TEAESIHCGINTPHG*SSTMALDYGLTVGQ
Trigger: TTGGCCCACGGTTAGTCCATAATCTAGAGCCATTGTGGAACTGCAGCCATGAGGTGTGTTTATCCCACAGTGGATTGACTCAGCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR GCA 90 bp GGCTCTAGATTATGGACTAACCGTGGGCCAACAATGAAAATAAATTaGTGGCTGCACTTGACCCACCCCTTGGATGTGAAAGGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: GSRLWTNRGPTMKIN*WLHLTHPLDVKGGK
Trigger: TTTTCCACCTTTCACATCCAAGGGGTGGGTCAAGTGCAGCCAGCAATTTATTTTCATTGTTGGCCCACGGTTAGTCCATAATCTAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CCA 90 bp GATAAACACACCTCATGGCTGCAGTTCCACAATGGCTCTAGATTATaGACTAACCGTGGGCCAACAATGAAAATAAATTGCTGGCTGCAC +
Preference number: 1 (lower is better)
Translates to: DKHTSWLQFHNGSRL*TNRGPTMKINCWLH
Trigger: GTGCAGCCAGCAATTTATTTTCATTGTTGGCCCACGGTTAGTCCATAATCTAGAGCCATTGTGGAACTGCAGCCATGAGGTGTGTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 90 bp GCTTACAGTGCCAAGATCCTTCCACACTCACACTTCCGTGTTTGGTaGCCTAACTTGTACATACATGTGGAAGTGAAACTGAATGAGGTT +
Preference number: 1 (lower is better)
Translates to: AYSAKILPHSHFRVW*PNLYIHVEVKLNEV
Trigger: AACCTCATTCAGTTTCACTTCCACATGTATGTACAAGTTAGGTCACCAAACACGGAAGTGTGAGTGTGGAAGGATCTTGGCACTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 90 bp CATGTTCTTCACTCCACACCCTATTATAAAGCCCACTTTCCATTCTaGGTTACAGTCACCTTGTGGACAAAAGCTGGGTTTGTTCTGGTA +
Preference number: 1 (lower is better)
Translates to: HVLHSTPYYKAHFPF*VTVTLWTKAGFVLV
Trigger: TACCAGAACAAACCCAGCTTTTGTCCACAAGGTGACTGTAACTCAGAATGGAAAGTGGGCTTTATAATAGGGTGTGGAGTGAAGAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CCA 90 bp AATAAATTGCTGGCTGCACTTGACCCACCCCTTGGATGTGAAAGGTaGAAAAGACTAAAGAGATCTACCTATATATCGACTCTGAAGACC +
Preference number: 1 (lower is better)
Translates to: NKLLAALDPPLGCER*KRLKRSTYISTLKT
Trigger: GGTCTTCAGAGTCGATATATAGGTAGATCTCTTTAGTCTTTTCCACCTTTCACATCCAAGGGGTGGGTCAAGTGCAGCCAGCAATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 90 bp AAATATCAGGAGCCAAAGCTCCTTCAGAGAGCAACTTTGATTCTATaGAGTGCGGTATGTGTGCATGTGTGTGTGTGTGTGTATTATATA +
Preference number: 1 (lower is better)
Translates to: KYQEPKLLQRATLIL*SAVCVHVCVCVYYI
Trigger: TATATAATACACACACACACACACATGCACACATACCGCACTTCATAGAATCAAAGTTGCTCTCTGAAGGAGCTTTGGCTCCTGATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR GCA 90 bp TTCTATGATCCCAAAGGAGCTCCCTATGGGTTTTTAGCACAAAACTaGACAACTTATGTAGATCTATGTGATCACAACAGACTTATCTGT +
Preference number: 1 (lower is better)
Translates to: FYDPKGAPYGFLAQN*TTYVDLCDHNRLIC
Trigger: ACAGATAAGTCTGTTGTGATCACATAGATCTACATAAGTTGTGCAGTTTTGTGCTAAAAACCCATAGGGAGCTCCTTTGGGATCATAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 90 bp ACACGACAAAATATCCTGTGTACTAATTTAGGGCCAACTATTAAGTaGCACGAAATGCCATGTCACCTAACAGAGTCTCTTTTTGCTATA +
Preference number: 1 (lower is better)
Translates to: TRQNILCTNLGPTIK*HEMPCHLTESLFAI
Trigger: TATAGCAAAAAGAGACTCTGTTAGGTGACATGGCATTTCGTGTCACTTAATAGTTGGCCCTAAATTAGTACACAGGATATTTTGTCGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CCA 90 bp GTTTTAACAGTGATCGATAACTATAAAGGTACTTGTATACATCAATaGATAGCATTGCTTACAGTGCCAAGATCCTTCCACACTCACACT +
Preference number: 1 (lower is better)
Translates to: VLTVIDNYKGTCIHQ*IALLTVPRSFHTHT
Trigger: AGTGTGAGTGTGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCTTTATAGTTATCGATCACTGTTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CCA 90 bp AGCTTAATAAAGCAATCGGCTCTGGCTCATGTTTCAGTCAGTATATaGTTTTTAAAAACCGCTACTGTCCAAATTAACACAATATATCAC +
Preference number: 1 (lower is better)
Translates to: SLIKQSALAHVSVSI*FLKTATVQINTIYH
Trigger: GTGATATATTGTGTTAATTTGGACAGTAGCGGTTTTTAAAAACCATATACTGACTGAAACATGAGCCAGAGCCGATTGCTTTATTAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTGTCACCCACAGAGGCTaGGTCAATCCACTGTGGGAT +
Preference number: 2 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLVTHRG*VNPLWD
Trigger: ATCCCACAGTGGATTGACTCAGCCTCTGTGGGTGAC...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGTGGCTACAGGGGCCATaGTCCCTACACAAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWWLQGP*SLHKFP
Trigger: TGGGAACTTGTGTAGGGATCATGGCCCCTGTAGCCA...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGCCCTAAGTGCAATCTaGGTGTGCCTTCACCAATGC +
Preference number: 2 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYALSAI*VCLHQC
Trigger: GCATTGGTGAAGGCACACTCAGATTGCACTTAGGGC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR GCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTAACACACCTCATGGCTaGAGTTCCACAATGGCTCTA +
Preference number: 2 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLNTPHG*SSTMAL
Trigger: TAGAGCCATTGTGGAACTGCAGCCATGAGGTGTGTT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTCCTATATATCGACTCTaGAGACCCCAATGCCATACA +
Preference number: 2 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLPIYRL*RPQCHT
Trigger: TGTATGGCATTGGGGTCTTCAGAGTCGATATATAGG...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGTTAACACTGGTGCCCTaGAGATGTGCCTCCATGTAT +
Preference number: 2 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWLTLVP*RCASMY
Trigger: ATACATGGAGGCACATCTTCAGGGCACCAGTGTTAA...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTAATGGCTCTAGATTATaGACTAACCGTGGGCCAACA +
Preference number: 2 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLNGSRL*TNRGPT
Trigger: TGTTGGCCCACGGTTAGTCCATAATCTAGAGCCATT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTTGTGACAATTGGCAGTaGATCAGGACAAAATACCCA +
Preference number: 2 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLCDNWQ*IRTKYP
Trigger: TGGGTATTTTGTCCTGATTCACTGCCAATTGTCACA...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGGGCCAACTATTAAGTaGCACGAAATGCCATGTCAC +
Preference number: 2 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYGPTIK*HEMPCH
Trigger: GTGACATGGCATTTCGTGTCACTTAATAGTTGGCCC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGTGCCTCCATGTATTTaGATTTCATGCAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWVPPCI*ISCRAR
Trigger: TCTTGCCCTGCATGAAATTCAAATACATGGAGGCAC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAGATAAACACACCTCATaGCTGCAGTTCCACAATGGC +
Preference number: 2 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPDKHTS*LQFHNG
Trigger: GCCATTGTGGAACTGCAGCCATGAGGTGTGTTTATC...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATTGTAGACATGGCTGCTaGCACAGTGTGAGAAAAACA +
Preference number: 2 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYCRHGC*HSVRKT
Trigger: TGTTTTTCTCACACTGTGTCAGCAGCCATGTCTACA...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR GCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGTGTGCCTTCACCAATaGTGGTTGCATGATCTTCTT +
Preference number: 2 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYVCLHQ*WLHDLL
Trigger: AAGAAGATCATGCAACCAGCATTGGTGAAGGCACAC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAATGAAAATAAATTGCTaGCTGCACTTGACCCACCCC +
Preference number: 2 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPMKINC*LHLTHP
Trigger: GGGGTGGGTCAAGTGCAGCCAGCAATTTATTTTCAT...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCCCACCCCTTGGATGTaGAAGGTGGAAAAGACTAAA +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVPTPWM*KVEKTK
Trigger: TTTAGTCTTTTCCACCTTTCACATCCAAGGGGTGGG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTAAGTTGCACACAGAGTaGTGCATAATCAGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVKLHTE*CIISQD
Trigger: GTCCTGGCTGATTATGCATCACTCTGTGTGCAACTT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGACAATGAAAATAAATTaGTGGCTGCACTTGACCCAC +
Preference number: 2 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWTMKIN*WLHLTH
Trigger: GTGGGTCAAGTGCAGCCAGCAATTTATTTTCATTGT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR GCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACCAAATGTAACCATGTaGTTCACGTCTATCTTCCTG +
Preference number: 2 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPPNVTM*FTSIFL
Trigger: CAGGAAGATAGACGTGAAGCACATGGTTACATTTGG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR GCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGGTGCCCTGAAGATGTaGCTCCATGTATTTGAATTT +
Preference number: 2 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYGALKM*LHVFEF
Trigger: AAATTCAAATACATGGAGGCACATCTTCAGGGCACC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CAA 90 bp GTGATCGATAACTATAAAGGTACTTGTATACATCAATGGATAGCATaGCTTACAGTGCCAAGATCCTTCCACACTCACACTTCCGTGTTT +
Preference number: 2 (lower is better)
Translates to: VIDNYKGTCIHQWIA*LTVPRSFHTHTSVF
Trigger: AAACACGGAAGTGTGAGTGTGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCTTTATAGTTATCGATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATTTTCCCAGAGATGCATaGAAGTGGGATTTTACTGTA +
Preference number: 2 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYFPRDA*KWDFTV
Trigger: TACAGTAAAATCCCACTTTCATGCATCTCTGGGAAA...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCATTCAGAGAGCAACTTTaGTTCTATGAAGTGCGGTAT +
Preference number: 2 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPFREQL*FYEVRY
Trigger: ATACCGCACTTCATAGAATCAAAGTTGCTCTCTGAA...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGTTCAATATCTTGTCTaGGGCCCAAATTCTAAACTA +
Preference number: 2 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWVQYLV*GPNSKL
Trigger: TAGTTTAGAATTTGGGCCTCAGACAAGATATTGAAC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGACATACATACATATATaGCGCTATTCCCCATTTCCA +
Preference number: 2 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWTYIHI*RYSPFP
Trigger: TGGAAATGGGGAATAGCGCCATATATGTATGTATGT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGCAACTTTGATTCTATaGAGTGCGGTATGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVATLIL*SAVCVH
Trigger: ATGCACACATACCGCACTTCATAGAATCAAAGTTGC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTAAGTTTGTAGCACCATaGAGAGTTGTAGCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVKFVAP*RVVAQV
Trigger: AACTTGGGCTACAACTCTTCATGGTGCTACAAACTT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACTTGGATGTGAAAGGTaGAAAAGACTAAAGAGATCT +
Preference number: 2 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLGCER*KRLKRS
Trigger: AGATCTCTTTAGTCTTTTCCACCTTTCACATCCAAG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCCAGGTAAACTTAACTaGACACAAATGGTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVPGKLN*TQMVPK
Trigger: CTTTGGAACCATTTGTGTTCAGTTAAGTTTACCTGG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGGAAGTGAAACTGAATaGGGTTCAATATCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVGSETE*GSISCL
Trigger: CAGACAAGATATTGAACCTCATTCAGTTTCACTTCC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR GCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACTTGTTAGAACATTGTaGAATTCAAATAAGCGAGTC +
Preference number: 2 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLVRTL*NSNKRV
Trigger: GACTCGCTTATTTGAATTGCACAATGTTCTAACAAG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGTATTGCTCACTAGATaGACGATCCTGAAAATATGT +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVVLLTR*TILKIC
Trigger: ACATATTTTCAGGATCGTTCATCTAGTGAGCAATAC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR GCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTATCATTTCCCAGAGATaGATGAAAGTGGGATTTTAC +
Preference number: 2 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVIISQR*MKVGFY
Trigger: GTAAAATCCCACTTTCATGCATCTCTGGGAAATGAT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CAA 90 bp GGTTTGTTTTACTTTACTTTGTTACCCTCTACAAACTCAACTTATTaGCAATACTCCTATCATTTCCCAGAGATGCATGAAAGTGGGATT +
Preference number: 2 (lower is better)
Translates to: GLFYFTLLPSTNSTY*QYSYHFPEMHESGI
Trigger: AATCCCACTTTCATGCATCTCTGGGAAATGATAGGAGTATTGCAAATAAGTTGAGTTTGTAGAGGGTAACAAAGTAAAGTAAAACAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAAATTGCTGGCTGCACTaGACCCACCCCTTGGATGTG +
Preference number: 3 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPNCWLH*THPLDV
Trigger: CACATCCAAGGGGTGGGTCAAGTGCAGCCAGCAATT...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 72 bp GAGCCAAAGCTCCTTCAGAGAGCAACTTTGATTCTATaGAGTGCGGTATGTGTGCATGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: EPKLLQRATLIL*SAVCVHVCVCV
Trigger: CACACACACACACACATGCACACATACCGCACTTCATAGAATCAAAGTTGCTCTCTGAAGGAGCTTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR GCA 72 bp GAGTCAATCCACTGTGGGATAAACACACCTCATGGCTaGAGTTCCACAATGGCTCTAGATTATGGACTAACC +
Preference number: 3 (lower is better)
Translates to: ESIHCGINTPHG*SSTMALDYGLT
Trigger: GGTTAGTCCATAATCTAGAGCCATTGTGGAACTGCAGCCATGAGGTGTGTTTATCCCACAGTGGATTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 72 bp GCCAAGATCCTTCCACACTCACACTTCCGTGTTTGGTaGCCTAACTTGTACATACATGTGGAAGTGAAACTG +
Preference number: 3 (lower is better)
Translates to: AKILPHSHFRVW*PNLYIHVEVKL
Trigger: CAGTTTCACTTCCACATGTATGTACAAGTTAGGTCACCAAACACGGAAGTGTGAGTGTGGAAGGATCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR GCA 72 bp TTATGGACTAACCGTGGGCCAACAATGAAAATAAATTaGTGGCTGCACTTGACCCACCCCTTGGATGTGAAA +
Preference number: 3 (lower is better)
Translates to: LWTNRGPTMKIN*WLHLTHPLDVK
Trigger: TTTCACATCCAAGGGGTGGGTCAAGTGCAGCCAGCAATTTATTTTCATTGTTGGCCCACGGTTAGTCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CCA 72 bp CTGGCTGCACTTGACCCACCCCTTGGATGTGAAAGGTaGAAAAGACTAAAGAGATCTACCTATATATCGACT +
Preference number: 3 (lower is better)
Translates to: LAALDPPLGCER*KRLKRSTYIST
Trigger: AGTCGATATATAGGTAGATCTCTTTAGTCTTTTCCACCTTTCACATCCAAGGGGTGGGTCAAGTGCAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCACTTGACCCACCCCTaGGATGTGAAAGGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYHLTHP*DVKGGK
Trigger: TTTTCCACCTTTCACATCCAAGGGGTGGGTCAAGTG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CCA 72 bp ACCTCATGGCTGCAGTTCCACAATGGCTCTAGATTATaGACTAACCGTGGGCCAACAATGAAAATAAATTGC +
Preference number: 3 (lower is better)
Translates to: TSWLQFHNGSRL*TNRGPTMKINC
Trigger: GCAATTTATTTTCATTGTTGGCCCACGGTTAGTCCATAATCTAGAGCCATTGTGGAACTGCAGCCATGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGTGTGCCTCCATGTATTaGAATTTCATGCAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWCASMY*NFMQGK
Trigger: CTTGCCCTGCATGAAATTCAAATACATGGAGGCACA...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGCATCAATGGATAGCATaGCTTACAGTGCCAAGATCC +
Preference number: 3 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWHQWIA*LTVPRS
Trigger: GGATCTTGGCACTGTAAGCAATGCTATCCATTGATG...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGGAAGACAGTGTGCTTaGAGACACGTAAACCTTGTA +
Preference number: 3 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWGRQCA*RHVNLV
Trigger: TACAAGGTTTACGTGTCTCAAAGCACACTGTCTTCC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAATGAGGTTCAATATCTaGTCTGAGGCCCAAATTCTA +
Preference number: 3 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPMRFNI*SEAQIL
Trigger: TAGAATTTGGGCCTCAGACAAGATATTGAACCTCAT...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAATCGGAGTAGGACTGTaGTTTTTGTTTTCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPIGVGL*FLFSAF
Trigger: AAAAGCAGAAAACAAAAACAACAGTCCTACTCCGAT...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 72 bp AATATCCTGTGTACTAATTTAGGGCCAACTATTAAGTaGCACGAAATGCCATGTCACCTAACAGAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: NILCTNLGPTIK*HEMPCHLTESL
Trigger: AAGAGACTCTGTTAGGTGACATGGCATTTCGTGTCACTTAATAGTTGGCCCTAAATTAGTACACAGGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CCA 72 bp GTGATCGATAACTATAAAGGTACTTGTATACATCAATaGATAGCATTGCTTACAGTGCCAAGATCCTTCCAC +
Preference number: 3 (lower is better)
Translates to: VIDNYKGTCIHQ*IALLTVPRSFH
Trigger: GTGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCTTTATAGTTATCGATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR-3UTR CAA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCTTCACCAATGCTGGTaGCATGATCTTCTTTTCTAT +
Preference number: 3 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVLHQCW*HDLLFY
Trigger: ATAGAAAAGAAGATCATGCAACCAGCATTGGTGAAG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 72 bp TTTAGCACAAAACTGCACAACTTATGTAGATCTATGTaGTCACAACAGACTTATCTGTGTTGTAGACATGGC +
Preference number: 3 (lower is better)
Translates to: FSTKLHNLCRSM*SQQTYLCCRHG
Trigger: GCCATGTCTACAACACAGATAAGTCTGTTGTGATCACATAGATCTACATAAGTTGTGCAGTTTTGTGCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR TCA 72 bp AAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATaGTGCAATCCGTTTCCTAATGGATTCCCAGTTTTT +
Preference number: 3 (lower is better)
Translates to: KYNFSSPAYVQV*CNPFPNGFPVF
Trigger: AAAAACTGGGAATCCATTAGGAAACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR GCA 72 bp AAGCCAATTCTGTGTTACATCCTTGTTAGAACATTGTaGAATTCAAATAAGCGAGTCTGCCTCATCTTTAAT +
Preference number: 3 (lower is better)
Translates to: KPILCYILVRTL*NSNKRVCLIFN
Trigger: ATTAAAGATGAGGCAGACTCGCTTATTTGAATTGCACAATGTTCTAACAAGGATGTAACACAGAATTGGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR GCA 72 bp ACTTTACTTTGTTACCCTCTACAAACTCAACTTATTTaGAATACTCCTATCATTTCCCAGAGATGCATGAAA +
Preference number: 3 (lower is better)
Translates to: TLLCYPLQTQLI*NTPIISQRCMK
Trigger: TTTCATGCATCTCTGGGAAATGATAGGAGTATTGCAAATAAGTTGAGTTTGTAGAGGGTAACAAAGTAAAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGTCACCCACAGAGGCTaGGTCAATCCACTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWVTHRG*VNPLWD
Trigger: ATCCCACAGTGGATTGACTCAGCCTCTGTGGGTGAC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATTGGACGCGGCGGGCCTaGAAATTGTTTCCTTACGCC +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYWTRRA*KLFPYA
Trigger: GGCGTAAGGAAACAATTTCCAGGCCCGCCGCGTCCA...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATTCTCATATTTCGGGCTaGACGCGGCGGGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYSHISG*TRRAWK
Trigger: TTTCCAGGCCCGCCGCGTCCAGCCCGAAATATGAGA...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTGACGACTTGCCTGCATaGGATTTAAGGTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLDDLPA*DLRCSR
Trigger: TCTGGAGCACCTTAAATCTCATGCAGGCAAGTCGTC...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGCCCTAAGTGCAATCTaGGTGTGCCTTCACCAATGC +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWALSAI*VCLHQC
Trigger: GCATTGGTGAAGGCACACTCAGATTGCACTTAGGGC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGCTGCTGACAGTGAGTaGAGAGACCCAAGCCCTATA +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWAADSE*RDPSPI
Trigger: TATAGGGCTTGGGTCTCTGCACTCACTGTCAGCAGC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGACGCTTACGTTTCCCTaGAGGGACTTTCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWTLTFP*RDFLGI
Trigger: GATACCCAGAAAGTCCCTTCAGGGAAACGTAAGCGT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGAACATACCTTACAGGTaGGGTCACCACTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWNIPYR*GHHLLR
Trigger: CCGCAACAAGTGGTGACCTCACCTGTAAGGTATGTT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGTGTTTGCAGGATCCTaGAGATCCTGTGTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWVFAGS*RSCVCG
Trigger: CCCACAAACACAGGATCTTCAGGATCCTGCAAACAC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGCCATCCTCAGAGGGTTaGCAACATCATAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWPSSEG*QHHRKA
Trigger: GGCCTTTCTATGATGTTGTCAACCCTCTGAGGATGG...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTACCAGACGACTTGCCTaGATGAGATTTAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLTRRLA*MRFKVL
Trigger: GAGCACCTTAAATCTCATGCAGGCAAGTCGTCTGGT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTTTCTTGTTGGACACTTaGGAACTGCCCAACTCCACT +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLFLLDT*ELPNST
Trigger: AGTGGAGTTGGGCAGTTCCCAAGTGTCCAACAAGAA...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATACCAGGCCTTCTTGTTaGACACTTGGGAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYTRPSC*TLGNCP
Trigger: TGGGCAGTTCCCAAGTGTCCAACAAGAAGGCCTGGT...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTATCCCGAGCTCTGCATaGACTGAAATGGAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLIPSSA*TEMECC
Trigger: ACAACACTCCATTTCAGTCCATGCAGAGCTCGGGAT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAGTTGTGATCATTTGGTaGGCAGATCCCGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPVVIIW*ADPELC
Trigger: GCAGAGCTCGGGATCTGCCCACCAAATGATCACAAC...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTAAAGTTGTGATCATTTaGTGGGCAGATCCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLKVVII*WADPEL
Trigger: GAGCTCGGGATCTGCCCACCAAATGATCACAACTTT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGGAAACGTGGGAGGGTaGTACTTGTGCTTAAACTGC +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWGNVGG*YLCLNC
Trigger: GCAGTTTAAGCACAAGTACCACCCTCCCACGTTTCC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACTTAGCCAGTCCCATTaGCTCTTCGTGGAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLSQSH*LFVEES
Trigger: ACTCTCTTCCACGAAGAGTCAATGGGACTGGCTAAG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTGTTTTCTCAGGAGAATaGGTAGCCATGTGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLVFSGE*VAMCLC
Trigger: ACAAAGGCACATGGCTACTCATTCTCCTGAGAAAAC...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGCATGCAAGGCCAAGTaGCGTTTAAATCCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWACKAK*RLNPSL
Trigger: CAAGCTTGGATTTAAACGTCACTTGGCCTTGCATGC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGTGCTTAAACTGCTGGTaGAAGCTGCTGACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWCLNCW*KLLTVS
Trigger: ACTCACTGTCAGCAGCTTTCACCAGCAGTTTAAGCA...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTTGGCTACAGGGGCCATaGTCCCTACACAAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVWLQGP*SLHKFP
Trigger: TGGGAACTTGTGTAGGGATCATGGCCCCTGTAGCCA...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTGTGCCTCCATGTATTTaGATTTCATGCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLVPPCI*ISCRAR
Trigger: TCTTGCCCTGCATGAAATTCAAATACATGGAGGCAC...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTTGTAGACATGGCTGCTaGCACAGTGTGAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLCRHGC*HSVRKT
Trigger: TGTTTTTCTCACACTGTGTCAGCAGCCATGTCTACA...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGCCCACTTTCCATTCTaGGTTACAGTCACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYAHFPF*VTVTLW
Trigger: CCACAAGGTGACTGTAACTCAGAATGGAAAGTGGGC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGAGGTCACCACTTGTTaGGGCATGCAAGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVEVTTC*GMQGQV
Trigger: CACTTGGCCTTGCATGCCGCAACAAGTGGTGACCTC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGAAGTGCGGTATGTGTaGATGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWEVRYV*MCVCVC
Trigger: ACACACACACACACACATGCACACATACCGCACTTC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTCCCATTGACTCTTCGTaGAAGAGAGTGGAATCCAAT +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLPIDSS*KRVESN
Trigger: ATTGGATTCCACTCTCTTCCACGAAGAGTCAATGGG...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTATGAAAATAAATTGCTaGCTGCACTTGACCCACCCC +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLMKINC*LHLTHP
Trigger: GGGGTGGGTCAAGTGCAGCCAGCAATTTATTTTCAT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGATAAACACACCTCATaGCTGCAGTTCCACAATGGC +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWDKHTS*LQFHNG
Trigger: GCCATTGTGGAACTGCAGCCATGAGGTGTGTTTATC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTACAAATCACCAGGAATaGCAGTGGCCATCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVTNHQE*QWPSQP
Trigger: AGGCTGCGATGGCCACTGTCATTCCTGGTGATTTGT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTTTGAGAATCTTGGGATaGAGAGGGCACGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVLRILG*RGHATL
Trigger: CAAGGTGGCGTGCCCTCTTCATCCCAAGATTCTCAA...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAGGGCCAACTATTAAGTaGCACGAAATGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPGPTIK*HEMPCH
Trigger: GTGACATGGCATTTCGTGTCACTTAATAGTTGGCCC...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCCCACCCCTTGGATGTaGAAGGTGGAAAAGACTAAA +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYPTPWM*KVEKTK
Trigger: TTTAGTCTTTTCCACCTTTCACATCCAAGGGGTGGG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGTGGACACTTGGGAACTaGCCAACTCCACTAAATGAT +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWWTLGN*PTPLND
Trigger: ATCATTTAGTGGAGTTGGGCAGTTCCCAAGTGTCCA...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATTGCAGTCTTGTTGTATaGACTTGTAGGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYCSLVV*TCRASL
Trigger: GAGAGAGGCCCTACAAGTGCATACAACAAGACTGCA...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTAAACAAAGGCCTTGGTaGAGTCTTGTTGTATGCACT +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLKQRPW*SLVVCT
Trigger: AGTGCATACAACAAGACTGCACCAAGGCCTTTGTTT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGCCAGAAGCACTCCCGTaGTTTCAAAAGTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWPEALP*FQKFAN
Trigger: GTTTGCAAACTTTTGAAAGCACGGGAGTGCTTCTGG...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGTCGCCCAAATCTCTGTaGACAATACTGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWSPKSL*TILTEE
Trigger: TTCCTCTGTCAGTATTGTGCACAGAGATTTGGGCGA...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGAAGCCCTATAGTGTTTaGAGGATCCTGAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWKPYSV*RILKIL
Trigger: CAGGATCTTCAGGATCCTGCAAACACTATAGGGCTT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGTGTGCCTTCACCAATaGTGGTTGCATGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWVCLHQ*WLHDLL
Trigger: AAGAAGATCATGCAACCAGCATTGGTGAAGGCACAC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCAGAATGAAGCATTCTaGGTGCCAAATACGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYQNEAF*VPNTAK
Trigger: CTTGGCCGTATTTGGCACCCAGAATGCTTCATTCTG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTTTGATAACAGTTCACTaGAAGGTAAGGACATCACCG +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLLITVH*KVRTSP
Trigger: CGGTGATGTCCTTACCTTCCAGTGAACTGTTATCAA...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTGTTACAGTCACCTTGTaGACAAAAGCTGGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLVTVTL*TKAGFV
Trigger: AACAAACCCAGCTTTTGTCCACAAGGTGACTGTAAC...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTAAAGCAAAAAGGGACTaGTTACTGATGGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLKAKRD*LLMEKA
Trigger: GGCTTTTTCCATCAGTAATCAGTCCCTTTTTGCTTT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGGTATCTCTTACTTCTaGCAAATCACCAGGAATGAC +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWGISYF*QITRND
Trigger: GTCATTCCTGGTGATTTGTCAGAAGTAAGAGATACC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCCAAAGGTAAAGTTGTaGTCATTTGGTGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYPKVKL*SFGGQI
Trigger: GATCTGCCCACCAAATGATCACAACTTTACCTTTGG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTTCTAGGGACCCAATCTaGGGATCCAACCCTAGCTTA +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVSRDPI*GSNPSL
Trigger: TAAGCTAGGGTTGGATCCTCAGATTGGGTCCCTAGA...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTGGAAGTGAAACTGAATaGGGTTCAATATCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLGSETE*GSISCL
Trigger: CAGACAAGATATTGAACCTCATTCAGTTTCACTTCC...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTACAATGAAAATAAATTaGTGGCTGCACTTGACCCAC +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLTMKIN*WLHLTH
Trigger: GTGGGTCAAGTGCAGCCAGCAATTTATTTTCATTGT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCATCACGTCTATCTTCCTaGTTAGAAGTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPSRLSS*LEVCHP
Trigger: TGGGTGACAGACTTCTAAGCAGGAAGATAGACGTGA...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATAACATCAAAAGACACTaGCTTCCATCCTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYNIKRH*LPSSEG
Trigger: ACCCTCTGAGGATGGAAGGCAGTGTCTTTTGATGTT...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACTTCGTGGAAGAGAGTaGAATCCAATCCTTCCCATT +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLRGRE*NPILPI
Trigger: AATGGGAAGGATTGGATTCCACTCTCTTCCACGAAG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAAAAGGGACTGATTACTaGTGGAAAAAGCCTCAGACT +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPKGTDY*WKKPQT
Trigger: AGTCTGAGGCTTTTTCCATCAGTAATCAGTCCCTTT...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATTGTGACAATTGGCAGTaGATCAGGACAAAATACCCA +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYCDNWQ*IRTKYP
Trigger: TGGGTATTTTGTCCTGATTCACTGCCAATTGTCACA...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGCAACTTTGATTCTATaGAGTGCGGTATGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYATLIL*SAVCVH
Trigger: ATGCACACATACCGCACTTCATAGAATCAAAGTTGC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTTTAACACTGGTGCCCTaGAGATGTGCCTCCATGTAT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVLTLVP*RCASMY
Trigger: ATACATGGAGGCACATCTTCAGGGCACCAGTGTTAA...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACACTTCCGTGTTTGGTaGCCTAACTTGTACATACAT +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPHFRVW*PNLYIH
Trigger: ATGTATGTACAAGTTAGGTCACCAAACACGGAAGTG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATAAGTTTGTAGCACCATaGAGAGTTGTAGCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYKFVAP*RVVAQV
Trigger: AACTTGGGCTACAACTCTTCATGGTGCTACAAACTT...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTAACACACCTCATGGCTaGAGTTCCACAATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVNTPHG*SSTMAL
Trigger: TAGAGCCATTGTGGAACTGCAGCCATGAGGTGTGTT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCCAAATGTAACCATGTaGTTCACGTCTATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYPNVTM*FTSIFL
Trigger: CAGGAAGATAGACGTGAAGCACATGGTTACATTTGG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTATCATTTCCCAGAGATaGATGAAAGTGGGATTTTAC +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLIISQR*MKVGFY
Trigger: GTAAAATCCCACTTTCATGCATCTCTGGGAAATGAT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAGTAAACATTGCAATCTaGAGTGATAACTGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPVNIAI*SDNWPY
Trigger: GTAGGGCCAGTTATCACTGCAGATTGCAATGTTTAC...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGTGTTCTGGTAACATTTaGATGTCCGAGATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWCSGNI*MSEISF
Trigger: AAAGGAGATCTCGGACATGCAAATGTTACCAGAACA...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAGTCAAGGAAATCCACTaGTTCTGTTTTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPVKEIH*FCFDLQ
Trigger: CTGAAGGTCAAAACAGAACCAGTGGATTTCCTTGAC...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGATCTGCAGTGATAACTaGCCCTACAAAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWICSDN*PYKKER
Trigger: TCTTTCCTTTTTGTAGGGCCAGTTATCACTGCAGAT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCAAAGGAGCTCCCTATaGGTTTTTAGCACAAAACTG +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYQRSSL*VFSTKL
Trigger: CAGTTTTGTGCTAAAAACCCATAGGGAGCTCCTTTG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCCACTGGTTCTGTTTTaGCCTTCAGAAGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVPLVLF*PSEALD
Trigger: ATCAAGAGCTTCTGAAGGTCAAAACAGAACCAGTGG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGATGATGACGATGCTTaGGAATCTTGGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVDDDDA*ESWDEE
Trigger: CTCTTCATCCCAAGATTCTCAAGCATCGTCATCATC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCCTATATATCGACTCTaGAGACCCCAATGCCATACA +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVPIYRL*RPQCHT
Trigger: TGTATGGCATTGGGGTCTTCAGAGTCGATATATAGG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCATTTTGCAAGTGCACATaGATACATTGTGGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPFCKCT*IHCGGV
Trigger: TACACCACCACAATGTATTCATGTGCACTTGCAAAA...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTCTTGTTAGAACATTGTaGAATTCAAATAAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLLVRTL*NSNKRV
Trigger: GACTCGCTTATTTGAATTGCACAATGTTCTAACAAG...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTACTGGGAAGACAGTGTaGTTTGAGACACGTAAACCT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVTGKTV*FETRKP
Trigger: AGGTTTACGTGTCTCAAAGCACACTGTCTTCCCAGT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCACATTGCAGGTAAATaGGTCAAGGAAATCCACTGG +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVHIAGK*VKEIHW
Trigger: CCAGTGGATTTCCTTGACCCATTTACCTGCAATGTG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCTTGTGGACAAAAGCTaGGTTTGTTCTGGTAACATT +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYLVDKS*VCSGNI
Trigger: AATGTTACCAGAACAAACCCAGCTTTTGTCCACAAG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCCCAACTCCACTAAATaGTATAGCTTTAGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVPNSTK*YSFRWL
Trigger: AAGCCACCTAAAGCTATATCATTTAGTGGAGTTGGG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATAATTCCCTCTTACTCTaGAGTGTTATTTCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYNSLLL*SVISSL
Trigger: CAGACTTGAAATAACACTTCAGAGTAAGAGGGAATT...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAGTTCAATATCTTGTCTaGGGCCCAAATTCTAAACTA +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPVQYLV*GPNSKL
Trigger: TAGTTTAGAATTTGGGCCTCAGACAAGATATTGAAC...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGTATTGCTCACTAGATaGACGATCCTGAAAATATGT +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYVLLTR*TILKIC
Trigger: ACATATTTTCAGGATCGTTCATCTAGTGAGCAATAC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAGTTCATCTGTACCACTaGAGCTTATATAATGAAGTG +
Preference number: 4 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPVHLYH*SLYNEV
Trigger: CACTTCATTATATAAGCTTCAGTGGTACAGATGAAC...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGGTGCCCTGAAGATGTaGCTCCATGTATTTGAATTT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVGALKM*LHVFEF
Trigger: AAATTCAAATACATGGAGGCACATCTTCAGGGCACC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTAGTGTCCATATCTATTaGGCATGTCATTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVSVHIY*ACHSQR
Trigger: CCTTTGGGAATGACATGCCCAATAGATATGGACACT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CAA 72 bp AACTATAAAGGTACTTGTATACATCAATGGATAGCATaGCTTACAGTGCCAAGATCCTTCCACACTCACACT +
Preference number: 4 (lower is better)
Translates to: NYKGTCIHQWIA*LTVPRSFHTHT
Trigger: AGTGTGAGTGTGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCTTTATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR TCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGCTTATGTTCAGGTATaGTGCAATCCGTTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVAYVQV*CNPFPN
Trigger: ATTAGGAAACGGATTGCATCATACCTGAACATAAGC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGATAAACATTCATTCTaGTTCATCTGTACCACTGAA +
Preference number: 4 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYDKHSF*FICTTE
Trigger: TTCAGTGGTACAGATGAACCAGAATGAATGTTTATC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CAA 72 bp CTTAGGCACACATTTACCAGAACTAACAGCCAGCCATaGCTAATGACGAATACTAAACATTTAAAAGATCTC +
Preference number: 4 (lower is better)
Translates to: LRHTFTRTNSQP*LMTNTKHLKDL
Trigger: GAGATCTTTTAAATGTTTAGTATTCGTCATTAGCAATGGCTGGCTGTTAGTTCTGGTAAATGTGTGCCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGTGCTTTCAAAAGTTTaGAAACATACCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVVLSKV*KHTLQV
Trigger: CACCTGTAAGGTATGTTTGCAAACTTTTGAAAGCAC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR GCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTTTCACCAATGCTGGTTaGATGATCTTCTTTTCTATG +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVFTNAG*MIFFSM
Trigger: CATAGAAAAGAAGATCATGCAACCAGCATTGGTGAA...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CCA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCTTGGATGTGAAAGGTaGAAAAGACTAAAGAGATCT +
Preference number: 4 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVLGCER*KRLKRS
Trigger: AGATCTCTTTAGTCTTTTCCACCTTTCACATCCAAG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CAA 72 bp AAAAAGCCAATTCTGTGTTACATCCTTGTTAGAACATaGTGCAATTCAAATAAGCGAGTCTGCCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: KKPILCYILVRT*CNSNKRVCLIF
Trigger: AAAGATGAGGCAGACTCGCTTATTTGAATTGCACAATGTTCTAACAAGGATGTAACACAGAATTGGCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
3UTR CAA 72 bp TACTTTACTTTGTTACCCTCTACAAACTCAACTTATTaGCAATACTCCTATCATTTCCCAGAGATGCATGAA +
Preference number: 4 (lower is better)
Translates to: YFTLLPSTNSTY*QYSYHFPEMHE
Trigger: TTCATGCATCTCTGGGAAATGATAGGAGTATTGCAAATAAGTTGAGTTTGTAGAGGGTAACAAAGTAAAGTA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS GCA 90 bp AAGGCAACCTTATTAATAGACCGTCACAGAATGAAGCATTCTGGGTaGCAAATACGGCCAAGGCAGCACCAAGAGGCAACCGCGGGGCTT +
Preference number: 5 (lower is better)
Translates to: KATLLIDRHRMKHSG*QIRPRQHQEATAGL
Trigger: AAGCCCCGCGGTTGCCTCTTGGTGCTGCCTTGGCCGTATTTGGCACCCAGAATGCTTCATTCTGTGACGGTCTATTAATAAGGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS TCA 90 bp AAGGGACTTTCTGGGTATCTCTTACTTCTGACAAATCACCAGGAATaGCAGTGGCCATCGCAGCCTAAACCAGGCCTTCTTGTTGGACAC +
Preference number: 5 (lower is better)
Translates to: KGLSGYLLLLTNHQE*QWPSQPKPGLLVGH
Trigger: GTGTCCAACAAGAAGGCCTGGTTTAGGCTGCGATGGCCACTGTCATTCCTGGTGATTTGTCAGAAGTAAGAGATACCCAGAAAGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316981.8
ENST00000429357.2
ENST00000522009.1
CDS-3UTR CAA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTCCAATCCTTCCCATTTaGGCCAATCTGAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLPILPI*ANLRPC
Trigger: GCAGGGCCTCAGATTGGCCAAAATGGGAAGGATTGG...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTAATTGCTGGCTGCACTaGACCCACCCCTTGGATGTG +
Preference number: 5 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLNCWLH*THPLDV
Trigger: CACATCCAAGGGGTGGGTCAAGTGCAGCCAGCAATT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS CCA 90 bp CTTGGTTTGGTTTCACCACGCTTACGTTTCCCTGAAGGGACTTTCTaGGTATCTCTTACTTCTGACAAATCACCAGGAATGACAGTGGCC +
Preference number: 5 (lower is better)
Translates to: LGLVSPRLRFPEGTF*VSLTSDKSPGMTVA
Trigger: GGCCACTGTCATTCCTGGTGATTTGTCAGAAGTAAGAGATACCCAGAAAGTCCCTTCAGGGAAACGTAAGCGTGGTGAAACCAAACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316981.8
ENST00000429357.2
ENST00000522009.1
CDS CCA 90 bp AAAAAGCCTCAGACTTTGATCTTAGCCAGTCCCATTGACTCTTCGTaGAAGAGAGTGGAATCCAATCCTTCCCATTTTGGCCAATCGCGG +
Preference number: 5 (lower is better)
Translates to: KKPQTLILASPIDSS*KRVESNPSHFGQSR
Trigger: CCGCGATTGGCCAAAATGGGAAGGATTGGATTCCACTCTCTTCCACGAAGAGTCAATGGGACTGGCTAAGATCAAAGTCTGAGGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423799.6
ENST00000429357.2
CDS TCA 90 bp CAGTGTCCATATCTATTGGGCATGTCATTCCCAAAGGTAAAGTTGTaGTCATTTGGTGGGCAGATCCCGAGCTCTGCATGGACTGAAATG +
Preference number: 5 (lower is better)
Translates to: QCPYLLGMSFPKVKL*SFGGQIPSSAWTEM
Trigger: CATTTCAGTCCATGCAGAGCTCGGGATCTGCCCACCAAATGATCACAACTTTACCTTTGGGAATGACATGCCCAATAGATATGGACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CCA 90 bp CGGAAGGAGCTCGTCTTTTATAGGCACAGACACATTGCAGGTAAATaGGTCAAGGAAATCCACTGGTTCTGTTTTGACCTTCAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: RKELVFYRHRHIAGK*VKEIHWFCFDLQKL
Trigger: GAGCTTCTGAAGGTCAAAACAGAACCAGTGGATTTCCTTGACCCATTTACCTGCAATGTGTCTGTGCCTATAAAAGACGAGCTCCTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS-3UTR CAA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATAACCAGGCCTTCTTGTaGGACACTTGGGAACTGCCC +
Preference number: 5 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYNQAFL*DTWELP
Trigger: GGGCAGTTCCCAAGTGTCCAACAAGAAGGCCTGGTT...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTCACTTGACCCACCCCTaGGATGTGAAAGGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLHLTHP*DVKGGK
Trigger: TTTTCCACCTTTCACATCCAAGGGGTGGGTCAAGTG...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS CCA 90 bp AAAAAGCCTCAGACTTTGATCTTAGCCAGTCCCATTGACTCTTCGTaGAAGAGAGTGGAATCCAATCCTTCCCATTTTGGCCAATCTGAG +
Preference number: 5 (lower is better)
Translates to: KKPQTLILASPIDSS*KRVESNPSHFGQSE
Trigger: CTCAGATTGGCCAAAATGGGAAGGATTGGATTCCACTCTCTTCCACGAAGAGTCAATGGGACTGGCTAAGATCAAAGTCTGAGGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACTTCTTGTTGGACACTaGGGAACTGCCCAACTCCAC +
Preference number: 5 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLLVGH*GTAQLH
Trigger: GTGGAGTTGGGCAGTTCCCAAGTGTCCAACAAGAAG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTATAGGCACAGACACATaGCAGGTAAATGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLIGTDT*QVNGSR
Trigger: CCTTGACCCATTTACCTGCAATGTGTCTGTGCCTAT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS TCA 90 bp TTACTGATGGAAAAAGCCTCAGACTTTGATCTTAGCCAGTCCCATTaGCTCTTCGTGGAAGAGAGTGGAATCCAATCCTTCCCATTTTGG +
Preference number: 5 (lower is better)
Translates to: LLMEKASDFDLSQSH*LFVEESGIQSFPFW
Trigger: CCAAAATGGGAAGGATTGGATTCCACTCTCTTCCACGAAGAGTCAATGGGACTGGCTAAGATCAAAGTCTGAGGCTTTTTCCATCAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS TCA 90 bp CAGGCCTTCTTGTTGGACACTTGGGAACTGCCCAACTCCACTAAATaGTATAGCTTTAGGTGGCTTCTCAAGTTTCATGTGGTCGTAAAA +
Preference number: 5 (lower is better)
Translates to: QAFLLDTWELPNSTK*YSFRWLLKFHVVVK
Trigger: TTTTACGACCACATGAAACTTGAGAAGCCACCTAAAGCTATATCATTTAGTGGAGTTGGGCAGTTCCCAAGTGTCCAACAAGAAGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316981.8
ENST00000429357.2
ENST00000522009.1
CDS CCA 90 bp AAAAAGCCTCAGACTTTGATCTTAGCCAGTCCCATTGACTCTTCGTaGAAGAGAGTGGAATCCAATCCTTCCCATTTTGGCCAATCTATG +
Preference number: 5 (lower is better)
Translates to: KKPQTLILASPIDSS*KRVESNPSHFGQSM
Trigger: CATAGATTGGCCAAAATGGGAAGGATTGGATTCCACTCTCTTCCACGAAGAGTCAATGGGACTGGCTAAGATCAAAGTCTGAGGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522009.1
CDS-3UTR CAA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCGGCGGGCCTGGAAATaGTTTCCTTACGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVRRAWK*FPYASF
Trigger: GAAAGAGGCGTAAGGAAACAATTTCCAGGCCCGCCG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACTAAACCAGGCCTTCTaGTTGGACACTTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLNQAF*LDTWEL
Trigger: CAGTTCCCAAGTGTCCAACAAGAAGGCCTGGTTTAG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCACTTGGTGCAGTCTTGTaGTATGCACTTGTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLGAVL*YALVGP
Trigger: AGGCCCTACAAGTGCATACAACAAGACTGCACCAAG...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTCATCAATGGATAGCATaGCTTACAGTGCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLHQWIA*LTVPRS
Trigger: GGATCTTGGCACTGTAAGCAATGCTATCCATTGATG...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTGTCCGAGATCTCCTTTaGCAAGTGCACATGAATACA +
Preference number: 5 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLVRDLL*QVHMNT
Trigger: TGTATTCATGTGCACTTGCAAAAGGAGATCTCGGAC...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCAACACTGTTAAAGGCCTaGTCACACAGTTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPTLLKA*SHSWQG
Trigger: TCCTTGCCAACTGTGTGACAAGGCCTTTAACAGTGT...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTGGCCTTGGTGCAGTCTaGTTGTATGCACTTGTAGGG +
Preference number: 5 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVGLGAV*LYALVG
Trigger: CCCTACAAGTGCATACAACAAGACTGCACCAAGGCC...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGCACTTAAACGTCTCTTaGTTAGGGTCGTGTGTATGG +
Preference number: 5 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWHLNVS*LGSCVW
Trigger: CCATACACACGACCCTAACAAAGAGACGTTTAAGTG...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS CCA 90 bp TATAGGCACAGACACATTGCAGGTAAATGGGTCAAGGAAATCCACTaGTTCTGTTTTGACCTTCAGAAGCTCTTGATTGTGACTCTTCTT +
Preference number: 5 (lower is better)
Translates to: YRHRHIAGKWVKEIH*FCFDLQKLLIVTLL
Trigger: AAGAAGAGTCACAATCAAGAGCTTCTGAAGGTCAAAACAGAACCAGTGGATTTCCTTGACCCATTTACCTGCAATGTGTCTGTGCCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGGACCTTCAGAAGCTCTaGATTGTGACTCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWDLQKL*IVTLLH
Trigger: ATGAAGAAGAGTCACAATCAAGAGCTTCTGAAGGTC...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATTGTGCCTCCATGTATTaGAATTTCATGCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYCASMY*NFMQGK
Trigger: CTTGCCCTGCATGAAATTCAAATACATGGAGGCACA...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TCCCTACACAAGTTCCCAAATGTAACCATGTGCTTCACGTCTATCTTCCTGCTTATGAGGTTCAATATCTaGTCTGAGGCCCAAATTCTA +
Preference number: 5 (lower is better)
Translates to: SLHKFPNVTMCFTSIFLLMRFNI*SEAQIL
Trigger: TAGAATTTGGGCCTCAGACAAGATATTGAACCTCAT...AAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTTGTGTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATAAAAAGCCTCAGACTTaGATCTTAGCCAGTCCCATT +
Preference number: 5 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYKKPQT*ILASPI
Trigger: AATGGGACTGGCTAAGATCAAAGTCTGAGGCTTTTT...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCATTAGAAACAAAGGCCTaGGTGCAGTCTTGTTGTATG +
Preference number: 5 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPLETKA*VQSCCM
Trigger: CATACAACAAGACTGCACCAAGGCCTTTGTTTCTAA...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTATCCTACTGAAAAGCTaGATGGAAACGTGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVILLKS*METWEG
Trigger: ACCCTCCCACGTTTCCATCAAGCTTTTCAGTAGGAT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGACTAACAGCCAGCCATaGCTAATGACGAATACTAAA +
Preference number: 5 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWTNSQP*LMTNTK
Trigger: TTTAGTATTCGTCATTAGCAATGGCTGGCTGTTAGT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGCTTCACCAATGCTGGTaGCATGATCTTCTTTTCTAT +
Preference number: 5 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWLHQCW*HDLLFY
Trigger: ATAGAAAAGAAGATCATGCAACCAGCATTGGTGAAG...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TTAAAAGATCTCCTCCAATGTCACATGGATCTCAGTAGGCTAGAAGCAACTTGGATGTGCCTTTGTAATTaGTACTTAGAAACAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LKDLLQCHMDLSRLEATWMCLCN*YLETKA
Trigger: GGCCTTTGTTTCTAAGTACAAATTACAAAGGCACAT...CCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATCGTGCTTTCAAAAGTTaGCAAACATACCTTACAGGT +
Preference number: 5 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYRAFKS*QTYLTG
Trigger: ACCTGTAAGGTATGTTTGCAAACTTTTGAAAGCACG...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTCAGTGTCCATATCTATaGGGCATGTCATTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVQCPYL*GMSFPK
Trigger: CTTTGGGAATGACATGCCCAATAGATATGGACACTG...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp TGTAGCACCATGAAGAGTTGTAGCCCAAGTTACATTAGCAGCATGATCCAATATGTGCACATGAATACATaGTGGTGGTGTAAAAGTTTG +
Preference number: 5 (lower is better)
Translates to: CSTMKSCSPSYISSMIQYVHMNT*WWCKSL
Trigger: CAAACTTTTACACCACCACAATGTATTCATGTGCAC...ATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS-3UTR CAA 90 bp AGGTACTTGTATACATCAATGGATAGCATTGCTTACAGTGCCAAGATCCTTCCATCTCCATCCAAAATATaGCAAGGAAAGATGGATTCA +
Preference number: 5 (lower is better)
Translates to: RYLYTSMDSIAYSAKILPSPSKI*QGKMDS
Trigger: TGAATCCATCTTTCCTTGCAATATTTTGGATGGAGA...TGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAAGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS GCA 90 bp AGTTTCATGGCACATGCTTACATTCCATACTCTGCTTACGAGTCATaGATTAATTTTCACCAACTACATATGTTTATTAGGTCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: SFMAHAYIPYSAYES*INFHQLHMFIRSKH
Trigger: GTGCTTAGACCTAATAAACATATGTAGTTGGTGAAAATTAATGCATGACTCGTAAGCAGAGTATGGAATGTAAGCATGTGCCATGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522009.1
CDS-3UTR CAA 90 bp CTAAAAATACAATTTCAGCAGTCCAGCTTATGTTCAGGTATGATGCAATCCGTTATGGATTCCCAGTTTTaGTTAAATTCAAAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LKIQFQQSSLCSGMMQSVMDSQF*LNSKGC
Trigger: ACAGCCCTTTGAATTTAACAAAAACTGGGAATCCAT...AACGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS CCA 72 bp CTCCTGTCCCTCCATCACTCCTATGGGTGGGTGCACTaGAGTAACAGAAAGGGAAGGCTCTTCCATCACCAC +
Preference number: 6 (lower is better)
Translates to: LLSLHHSYGWVH*SNRKGRLFHHH
Trigger: GTGGTGATGGAAGAGCCTTCCCTTTCTGTTACTCCAGTGCACCCACCCATAGGAGTGATGGAGGGACAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519027.1
CDS TCA 72 bp AACGTGGGAGGGTGGTACTTGTGCTTAAACTGCTGGTaGAAGCTGCTGACAGTGAGTGCAGAGACCCAAGCC +
Preference number: 6 (lower is better)
Translates to: NVGGWYLCLNCW*KLLTVSAETQA
Trigger: GGCTTGGGTCTCTGCACTCACTGTCAGCAGCTTTCACCAGCAGTTTAAGCACAAGTACCACCCTCCCACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS TCA 72 bp GAGAGGTCTCCTGCACCATCATCTAGGGACCCAATCTaGGGATCCAACCCTAGCTTAGATGATGACGATGCT +
Preference number: 6 (lower is better)
Translates to: ERSPAPSSRDPI*GSNPSLDDDDA
Trigger: AGCATCGTCATCATCTAAGCTAGGGTTGGATCCTCAGATTGGGTCCCTAGATGATGGTGCAGGAGACCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CAA 72 bp AATGACAGTGGCCATCGCAGCCTAAACCAGGCCTTCTaGTTGGACACTTGGGAACTGCCCAACTCCACTAAA +
Preference number: 6 (lower is better)
Translates to: NDSGHRSLNQAF*LDTWELPNSTK
Trigger: TTTAGTGGAGTTGGGCAGTTCCCAAGTGTCCAACAAGAAGGCCTGGTTTAGGCTGCGATGGCCACTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316981.8
ENST00000429357.2
ENST00000522009.1
CDS TCA 72 bp CCGTGCTTTCAAAAGTTTGCAAACATACCTTACAGGTaGGGTCACCACTTGTTGCGGCATGCAAGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: PCFQKFANIPYR*GHHLLRHARPS
Trigger: ACTTGGCCTTGCATGCCGCAACAAGTGGTGACCTCACCTGTAAGGTATGTTTGCAAACTTTTGAAAGCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CCA 72 bp AACCTTATTAATAGACCGTCACAGAATGAAGCATTCTaGGTGCCAAATACGGCCAAGGCAGCACCAAGAGGC +
Preference number: 6 (lower is better)
Translates to: NLINRPSQNEAF*VPNTAKAAPRG
Trigger: GCCTCTTGGTGCTGCCTTGGCCGTATTTGGCACCCAGAATGCTTCATTCTGTGACGGTCTATTAATAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316981.8
CDS CAA 90 bp AAGGACATCACCGGAAGGAGCTCGTCTTTTATAGGCACAGACACATaGCAGGTAAATGGGTCAAGGAAATCCACTGGTTCTGTTTTGACC +
Preference number: 6 (lower is better)
Translates to: KDITGRSSSFIGTDT*QVNGSRKSTGSVLT
Trigger: GGTCAAAACAGAACCAGTGGATTTCCTTGACCCATTTACCTGCAATGTGTCTGTGCCTATAAAAGACGAGCTCCTTCCGGTGATGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS TCA 72 bp TATCTATTGGGCATGTCATTCCCAAAGGTAAAGTTGTaGTCATTTGGTGGGCAGATCCCGAGCTCTGCATGG +
Preference number: 6 (lower is better)
Translates to: YLLGMSFPKVKL*SFGGQIPSSAW
Trigger: CCATGCAGAGCTCGGGATCTGCCCACCAAATGATCACAACTTTACCTTTGGGAATGACATGCCCAATAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS GCA 72 bp TTGCAAACATACCTTACAGGTGAGGTCACCACTTGTTaGGGCATGCAAGGCCAAGTGACGTTTAAATCCAAG +
Preference number: 6 (lower is better)
Translates to: LQTYLTGEVTTC*GMQGQVTFKSK
Trigger: CTTGGATTTAAACGTCACTTGGCCTTGCATGCCGCAACAAGTGGTGACCTCACCTGTAAGGTATGTTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS GCA 72 bp AGGTGCTCCAGAAGCACTCCCGTGCTTTCAAAAGTTTaGAAACATACCTTACAGGTGAGGTCACCACTTGTT +
Preference number: 6 (lower is better)
Translates to: RCSRSTPVLSKV*KHTLQVRSPLV
Trigger: AACAAGTGGTGACCTCACCTGTAAGGTATGTTTGCAAACTTTTGAAAGCACGGGAGTGCTTCTGGAGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CAA 72 bp AAGGTGCTCCAGAAGCACTCCCGTGCTTTCAAAAGTTaGCAAACATACCTTACAGGTGAGGTCACCACTTGT +
Preference number: 6 (lower is better)
Translates to: KVLQKHSRAFKS*QTYLTGEVTTC
Trigger: ACAAGTGGTGACCTCACCTGTAAGGTATGTTTGCAAACTTTTGAAAGCACGGGAGTGCTTCTGGAGCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CAA 72 bp ACCGGAAGGAGCTCGTCTTTTATAGGCACAGACACATaGCAGGTAAATGGGTCAAGGAAATCCACTGGTTCT +
Preference number: 6 (lower is better)
Translates to: TGRSSSFIGTDT*QVNGSRKSTGS
Trigger: AGAACCAGTGGATTTCCTTGACCCATTTACCTGCAATGTGTCTGTGCCTATAAAAGACGAGCTCCTTCCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS TCA 72 bp GAAAAAGCCTCAGACTTTGATCTTAGCCAGTCCCATTaGCTCTTCGTGGAAGAGAGTGGAATCCAATCCTTC +
Preference number: 6 (lower is better)
Translates to: EKASDFDLSQSH*LFVEESGIQSF
Trigger: GAAGGATTGGATTCCACTCTCTTCCACGAAGAGTCAATGGGACTGGCTAAGATCAAAGTCTGAGGCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CAA 90 bp TGGGTCAAGGAAATCCACTGGTTCTGTTTTGACCTTCAGAAGCTCTaGATTGTGACTCTTCTTCATATGTCGAGTCAGGTGATCCTTTCG +
Preference number: 6 (lower is better)
Translates to: WVKEIHWFCFDLQKL*IVTLLHMSSQVILS
Trigger: CGAAAGGATCACCTGACTCGACATATGAAGAAGAGTCACAATCAAGAGCTTCTGAAGGTCAAAACAGAACCAGTGGATTTCCTTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS TCA 72 bp TTGTTGGACACTTGGGAACTGCCCAACTCCACTAAATaGTATAGCTTTAGGTGGCTTCTCAAGTTTCATGTG +
Preference number: 6 (lower is better)
Translates to: LLDTWELPNSTK*YSFRWLLKFHV
Trigger: CACATGAAACTTGAGAAGCCACCTAAAGCTATATCATTTAGTGGAGTTGGGCAGTTCCCAAGTGTCCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316981.8
ENST00000429357.2
ENST00000522009.1
CDS CCA 72 bp AGACACATTGCAGGTAAATGGGTCAAGGAAATCCACTaGTTCTGTTTTGACCTTCAGAAGCTCTTGATTGTG +
Preference number: 6 (lower is better)
Translates to: RHIAGKWVKEIH*FCFDLQKLLIV
Trigger: CACAATCAAGAGCTTCTGAAGGTCAAAACAGAACCAGTGGATTTCCTTGACCCATTTACCTGCAATGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CCA 72 bp CTCGTCTTTTATAGGCACAGACACATTGCAGGTAAATaGGTCAAGGAAATCCACTGGTTCTGTTTTGACCTT +
Preference number: 6 (lower is better)
Translates to: LVFYRHRHIAGK*VKEIHWFCFDL
Trigger: AAGGTCAAAACAGAACCAGTGGATTTCCTTGACCCATTTACCTGCAATGTGTCTGTGCCTATAAAAGACGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CAA 72 bp GAAATCCACTGGTTCTGTTTTGACCTTCAGAAGCTCTaGATTGTGACTCTTCTTCATATGTCGAGTCAGGTG +
Preference number: 6 (lower is better)
Translates to: EIHWFCFDLQKL*IVTLLHMSSQV
Trigger: CACCTGACTCGACATATGAAGAAGAGTCACAATCAAGAGCTTCTGAAGGTCAAAACAGAACCAGTGGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316981.8
ENST00000423799.6
ENST00000429357.2
ENST00000522009.1
CDS CAA 72 bp AAGTTCCTGGGAGGGCTTGTTACACAAAGGAACAGTTaGGATACAAACTATACACATATCCATCTTCGGTTG +
Preference number: 6 (lower is better)
Translates to: KFLGGLVTQRNS*DTNYTHIHLRL
Trigger: CAACCGAAGATGGATATGTGTATAGTTTGTATCCAAACTGTTCCTTTGTGTAACAAGCCCTCCCAGGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519027.1
CDS CAA 90 bp GCTTCCAAAGCAAAGCAATGTAACATGAAAAGTTCCTGGGAGGGCTaGTTACACAAAGGAACAGTTTGGATACAAACTATACACATATCC +
Preference number: 6 (lower is better)
Translates to: ASKAKQCNMKSSWEG*LHKGTVWIQTIHIS
Trigger: GGATATGTGTATAGTTTGTATCCAAACTGTTCCTTTGTGTAACAAGCCCTCCCAGGAACTTTTCATGTTACATTGCTTTGCTTTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519027.1
CDS CAA 72 bp GCAAAGCAATGTAACATGAAAAGTTCCTGGGAGGGCTaGTTACACAAAGGAACAGTTTGGATACAAACTATA +
Preference number: 6 (lower is better)
Translates to: AKQCNMKSSWEG*LHKGTVWIQTI
Trigger: TATAGTTTGTATCCAAACTGTTCCTTTGTGTAACAAGCCCTCCCAGGAACTTTTCATGTTACATTGCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519027.1
CDS GCA 72 bp AAATACAGGATAAAAGAATTGCAGTTTCATGGCACATaGTTACATTCCATACTCTGCTTACGAGTCATGCAT +
Preference number: 6 (lower is better)
Translates to: KYRIKELQFHGT*LHSILCLRVMH
Trigger: ATGCATGACTCGTAAGCAGAGTATGGAATGTAAGCATGTGCCATGAAACTGCAATTCTTTTATCCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522009.1
CDS GCA 72 bp GCACATGCTTACATTCCATACTCTGCTTACGAGTCATaGATTAATTTTCACCAACTACATATGTTTATTAGG +
Preference number: 6 (lower is better)
Translates to: AHAYIPYSAYES*INFHQLHMFIR
Trigger: CCTAATAAACATATGTAGTTGGTGAAAATTAATGCATGACTCGTAAGCAGAGTATGGAATGTAAGCATGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522009.1