Pregenerated sensors for PLAC9 (Homo sapiens)
Ensembl gene IDs: ENSG00000189129Ensembl transcript IDs: ENST00000372263.4, ENST00000465660.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGACAGGGCTGGTTCTGTaGGCGCTGCCTGGCAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: WTHKIPGGLIAMQIWIKQTGLVL*ALPGRC Trigger: GCACCTGCCAGGCAGCGCCCACAGAACCAGCCCTGT...CTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| 3UTR-3UTR GCA 90 bp | TGGACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTGGTTCTGTGGGCGCTaGCTGGCAGGTGCACCACCT | + |
|
Preference number: 2 (lower is better) Translates to: WTHKIPGGLIAMQIWIKQWFCGR*LAGAPP Trigger: AGGTGGTGCACCTGCCAGGCAGCGCCCACAGAACCA...CTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCTGGGTTCGAGAGGACAGGGCTaGTTCTGTGGGCGCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: IKSLGVSLQCRFGLNSLGSRGQG*FCGRCL Trigger: CAGGCAGCGCCCACAGAACCAGCCCTGTCCTCTCGA...ACCCAGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGATCTGCCCCTATAAATaGCAGGAGTGGGGGTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: WTHKIPGGLIAMQIWIKQICPYK*QEWGCP Trigger: GGGACACCCCCACTCCTGTCATTTATAGGGGCAGAT...CTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR TCA 90 bp | TGGACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGGGTCGGGAGCGGGGCTaGAGGGTCCCGGGGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WTHKIPGGLIAMQIWIKQGRERG*RVPGAG Trigger: ACCTGCCCCCGGGACCCTTCAGCCCCGCTCCCGACC...CTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR TCA 90 bp | ATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCTGGGTCTCCTCGCGGAGGGCTaGAGGGTTCGGCAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKSLGVSLQCRFGLNSLGLLAEG*RVRQRP Trigger: TGGCCGCTGCCGAACCCTTCAGCCCTCCGCGAGGAG...ACCCAGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR CCA 90 bp | ATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCTGGGTACAGGGCTGGTTCTGTaGGCGCTGCCTGGCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IKSLGVSLQCRFGLNSLGTGLVL*ALPGRC Trigger: GCACCTGCCAGGCAGCGCCCACAGAACCAGCCCTGT...ACCCAGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR GCA 90 bp | ATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCTGGGTTGGTTCTGTGGGCGCTaGCTGGCAGGTGCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSLGVSLQCRFGLNSLGWFCGR*LAGAPP Trigger: AGGTGGTGCACCTGCCAGGCAGCGCCCACAGAACCA...ACCCAGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR CCA 90 bp | ACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCTTCGAGAGGACAGGGCTaGTTCTGTGGGCGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: THKIPGGLIAMQIWIKQSSRGQG*FCGRCL Trigger: CAGGCAGCGCCCACAGAACCAGCCCTGTCCTCTCGA...AGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR TCA 90 bp | ATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCTGGGTATCTGCCCCTATAAATaGCAGGAGTGGGGGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKSLGVSLQCRFGLNSLGICPYK*QEWGCP Trigger: GGGACACCCCCACTCCTGTCATTTATAGGGGCAGAT...ACCCAGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR TCA 90 bp | TGGACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGCTACCATCTCCTCCATaGCATCTAGACGGCGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WTHKIPGGLIAMQIWIKQLPSPP*HLDGVA Trigger: TGCAACGCCGTCTAGATGTCATGGAGGAGATGGTAG...CTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| 3UTR CAA 72 bp | CACTTTAATGGACACATAAAATCCCTGGGGGTCTCATaGCAATGCAGATTTGGATTAAACAGTCTGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HFNGHIKSLGVS*QCRFGLNSLGG Trigger: CCCACCCAGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCATTAAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR GCA 90 bp | TGGACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGGGGGTCTCATTGCAATaGAGATTTGGATTAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WTHKIPGGLIAMQIWIKQGVSLQ*RFGLNS Trigger: ACTGTTTAATCCAAATCTGCATTGCAATGAGACCCC...CTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS-3UTR CCA 90 bp | ACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCTATTGCAATGCAGATTTaGATTAAACAGTCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: THKIPGGLIAMQIWIKQSIAMQI*IKQSGW Trigger: CCACCCAGACTGTTTAATCCAAATCTGCATTGCAAT...AGACTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS CCA 90 bp | CTAAGAGAGCAGCTGGCGGTCCAGTGCGGTGCAGTGGGAAAGGACTaGGCGCTAAGTGACCTGGGTTTTCCTCACTCAGGCTCTGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LREQLAVQCGAVGKD*ALSDLGFPHSGSAP Trigger: AGGGGCAGAGCCTGAGTGAGGAAAACCCAGGTCACTTAGCGCCCAGTCCTTTCCCACTGCACCGCACTGGACCGCCAGCTGCTCTCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465660.1 |
||
| CDS-3UTR CAA 90 bp | TGGACACATAAAATCCCTGGGGGTCTCATTGCAATGCAGATTTGGATTAAACAGTCCCTGGGGGTCTCATaGCAATGCAGATTTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: WTHKIPGGLIAMQIWIKQSLGVS*QCRFGL Trigger: TAATCCAAATCTGCATTGCAATGAGACCCCCAGGGA...CTGTTTAATCCAAATCTGCATTGCAATGAGACCCCCAGGGATTTTATGTGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372263.4 |
||
| CDS CCA 72 bp | CAGCTGGCGGTCCAGTGCGGTGCAGTGGGAAAGGACTaGGCGCTAAGTGACCTGGGTTTTCCTCACTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLAVQCGAVGKD*ALSDLGFPHSG Trigger: GCCTGAGTGAGGAAAACCCAGGTCACTTAGCGCCCAGTCCTTTCCCACTGCACCGCACTGGACCGCCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465660.1 |
||