Pregenerated sensors for PLAC8L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000173261Ensembl transcript IDs: ENST00000311450.9, ENST00000512998.1
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCATTGGGACTGCACAGATTTCATAGACTTGGGAGGTCCTCATCTTaGGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: SLGLHRFHRLGRSSS*VPGPPGRWKKPNSS Trigger: ACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGTGCAGTCCCAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR GCA 90 bp | AAAAAGCCCAACAGCAGTGCACCGCCAGCCAGTCTTCACACAGTGTaGCCTAGGGCAAGACCAGAATCTGTATTTTATGTCTCTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KKPNSSAPPASLHTV*PRARPESVFYVSPW Trigger: CCAGGGAGAGACATAAAATACAGATTCTGGTCTTGCCCTAGGGCACACTGTGTGAAGACTGGCTGGCGGTGCACTGCTGTTGGGCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR GCA 90 bp | GGAGTTATCTTGCTGTCAAACCAGGGTGTCCTTAGTCATTGGGACTaGACAGATTTCATAGACTTGGGAGGTCCTCATCTTGAGTTCCCG | + |
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Preference number: 1 (lower is better) Translates to: GVILLSNQGVLSHWD*TDFIDLGGPHLEFP Trigger: CGGGAACTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGTGCAGTCCCAATGACTAAGGACACCCTGGTTTGACAGCAAGATAACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CCA 90 bp | GGAGGAGGAGTTATCTTGCTGTCAAACCAGGGTGTCCTTAGTCATTaGGACTGCACAGATTTCATAGACTTGGGAGGTCCTCATCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: GGGVILLSNQGVLSH*DCTDFIDLGGPHLE Trigger: CTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGTGCAGTCCCAATGACTAAGGACACCCTGGTTTGACAGCAAGATAACTCCTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CCA 90 bp | TCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCAGTGCAAAGGTaGACCCAGGTAACAACGGCCAACAAAGACACTCTCCATAATGCC | + |
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Preference number: 1 (lower is better) Translates to: SVFYVSPWCQFSVQR*TQVTTANKDTLHNA Trigger: GGCATTATGGAGAGTGTCTTTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCTATGTCTCTCCCTGGTaGCAATTCTCAGTGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSRATWQMEKAQQQCTASYVSPW*QFSVQR Trigger: CCTTTGCACTGAGAATTGGCACCAGGGAGAGACATA...GCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGGAGGTCCTCATCTTGAGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCTTCTCAGTGCAAAGGTaGACCCAGGTAACAACGGCC | + |
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Preference number: 2 (lower is better) Translates to: TWEVLILSSRATWQMEKAFSVQR*TQVTTA Trigger: GGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAA...GGCTTTTTCCATCTGCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CAA 90 bp | AACCAGGGTGTCCTTAGTCATTGGGACTGCACAGATTTCATAGACTaGGGAGGTCCTCATCTTGAGTTCCCGGGCCACCTGGCAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: NQGVLSHWDCTDFID*GGPHLEFPGHLADG Trigger: TCCATCTGCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGTGCAGTCCCAATGACTAAGGACACCCTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CCA 72 bp | ACTTGGGAGGTCCTCATCTTGAGTTCCCGGGCCACCTaGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCC | + |
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Preference number: 3 (lower is better) Translates to: TWEVLILSSRAT*QMEKAQQQCTA Trigger: GGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR TCA 72 bp | CTGCACAGATTTCATAGACTTGGGAGGTCCTCATCTTaGGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: LHRFHRLGRSSS*VPGPPGRWKKP Trigger: GGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CCA 72 bp | TATGTCTCTCCCTGGTGCCAATTCTCAGTGCAAAGGTaGACCCAGGTAACAACGGCCAACAAAGACACTCTC | + |
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Preference number: 3 (lower is better) Translates to: YVSPWCQFSVQR*TQVTTANKDTL Trigger: GAGAGTGTCTTTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CCA 72 bp | AGGGCAAGACCAGAATCTGTATTTTATGTCTCTCCCTaGTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RARPESVFYVSP*CQFSVQRWTQV Trigger: TACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGATTCTGGTCTTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CCA 72 bp | GTTATCTTGCTGTCAAACCAGGGTGTCCTTAGTCATTaGGACTGCACAGATTTCATAGACTTGGGAGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: VILLSNQGVLSH*DCTDFIDLGGP Trigger: AGGACCTCCCAAGTCTATGAAATCTGTGCAGTCCCAATGACTAAGGACACCCTGGTTTGACAGCAAGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR TCA 90 bp | AGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCGGGAGGTCCTCATCTTaGGTTCCCGGGCCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSRATWQMEKAQQQCTASGRSSS*VPGPPG Trigger: GCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCC...GCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR TCA 90 bp | CCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCCAGTCTATCTCTGCAGACACTaGAGAGACCGGTGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGHLADGKSPTAVHRQPVYLCRH*RDRCSS Trigger: GCTGGAGCACCGGTCTCTTCAGTGTCTGCAGAGATA...GACTGGCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | GTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCCTTCTCAGTGCAAAGGTaGACCCAGGTAACAACGGCC | + |
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Preference number: 4 (lower is better) Translates to: VPGPPGRWKKPNSSAPPAFSVQR*TQVTTA Trigger: GGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAA...GGCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | GTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCCGCGCTGGCTGGTACATaGCCTCTCAAGTTGGAAATA | + |
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Preference number: 4 (lower is better) Translates to: VPGPPGRWKKPNSSAPPAALAGT*PLKLEI Trigger: TATTTCCAACTTGAGAGGCCATGTACCAGCCAGCGC...GGCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR GCA 90 bp | TCCCTGGTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCAACAAGCTCCCCGAACAGGCTaGTTCACCACAGCGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLVPILSAKVDPGNNGQQAPRTG*FTTALA Trigger: AGCCAGCGCTGTGGTGAAGCAGCCTGTTCGGGGAGC...TTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR TCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTGGGAGGTCCTCATCTTaGGTTCCCGGGCCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSGRSSS*VPGPPG Trigger: GCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCC...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | GTCTCTCCCTGGTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCGAGGAGGAGTTATCTTaGTGTCAAACCAGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VSPWCQFSVQRWTQVTTAEEELS*CQTRVS Trigger: GGACACCCTGGTTTGACAGCAAGATAACTCCTCCTC...GGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | GTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCAACAAAGACACGCTTCACCACAGCGCTaGCTGGTACATGGCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: VPILSAKVDPGNNGQQRHASPQR*LVHGLS Trigger: TGAGAGGCCATGTACCAGCCAGCGCTGTGGTGAAGC...GTGTCTTTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | AGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCGGTGTCCTTAGTCATTaGGACTGCACAGATTTCATA | + |
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Preference number: 4 (lower is better) Translates to: SSRATWQMEKAQQQCTASGVLSH*DCTDFI Trigger: TATGAAATCTGTGCAGTCCCAATGACTAAGGACACC...GCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | GTGCAAAGGTGGACCCAGGTAACAACGGCCAACAAAGACACTCTCCATAATGCCCAGCCCCCGCCAGTCTaGACAATTGCTGTGATTGTC | + |
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Preference number: 4 (lower is better) Translates to: VQRWTQVTTANKDTLHNAQPPPV*TIAVIV Trigger: GACAATCACAGCAATTGTCCAGACTGGCGGGGGCTG...GGCATTATGGAGAGTGTCTTTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | TTGAGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCACTCTCCATAATGCCTaGCGATGTCACAAAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSSRATWQMEKAQQQCTATLHNA*RCHKIL Trigger: GAGAATTTTGTGACATCGCCAGGCATTATGGAGAGT...GGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| 3UTR CAA 72 bp | GTCCTTAGTCATTGGGACTGCACAGATTTCATAGACTaGGGAGGTCCTCATCTTGAGTTCCCGGGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: VLSHWDCTDFID*GGPHLEFPGHL Trigger: CAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGTGCAGTCCCAATGACTAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR GCA 90 bp | GATTTCATAGACTTGGGAGGTCCTCATCTTGAGTTCCCGGGCCACCTGGCAGATAGTCTTCACACAGTGTaGCCTAGGGCAAGACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DFIDLGGPHLEFPGHLADSLHTV*PRARPE Trigger: TTCTGGTCTTGCCCTAGGGCACACTGTGTGAAGACT...ATCTGCCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCAAGTCTATGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR TCA 90 bp | TCCCTGGTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCAACAAGATCCTCAGGACACCTaGAGAAGTTACTTCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: SLVPILSAKVDPGNNGQQDPQDT*RSYFQT Trigger: GGTTTGGAAGTAACTTCTTCAGGTGTCCTGAGGATC...TTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGAGTTCCCGGGCCACCTaGCAGATGGAAAAAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GKSNCSTERFERRVLGSKSSRAT*QMEKAQ Trigger: TTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACT...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTTATCTCTGCAGACACTaGAGAGACCGGTGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSYLCRH*RDRCSS Trigger: GCTGGAGCACCGGTCTCTTCAGTGTCTGCAGAGATA...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGCTCCCCGAACAGGCTaGTTCACCACAGCGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVAPRTG*FTTALA Trigger: AGCCAGCGCTGTGGTGAAGCAGCCTGTTCGGGGAGC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGGCCAGTCTGGACAATTaGTGTGATTGTCGTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GKSNCSTERFERRVLGSKASLDN*CDCRPA Trigger: GGCAGGACGACAATCACAGCAATTGTCCAGACTGGC...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | CTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCCAGTCTTCACACAGCTTAGTCATTGGGACTaGACAGATTTCATAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: LADGKSPTAVHRQPVFTQLSHWD*TDFIDL Trigger: CAAGTCTATGAAATCTGTGCAGTCCCAATGACTAAG...CTGTGTGAAGACTGGCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTCACCACAGCGCTGGCTaGTACATGGCCTCTCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSHHSAG*YMASQV Trigger: AACTTGAGAGGCCATGTACCAGCCAGCGCTGTGGTG...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | CCTAGGGCAAGACCAGAATCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCACACCACAGCGCTGGCTaGTACATGGCCTCTCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: PRARPESVFYVSPWCQFSHHSAG*YMASQV Trigger: AACTTGAGAGGCCATGTACCAGCCAGCGCTGTGGTG...TGAGAATTGGCACCAGGGAGAGACATAAAATACAGATTCTGGTCTTGCCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTCAGCCCCCGCCAGTCTaGACAATTGCTGTGATTGTC | + |
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Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSQPPPV*TIAVIV Trigger: GACAATCACAGCAATTGTCCAGACTGGCGGGGGCTG...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGGTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCAACAAGAGGTGAGTATATGTTaGGTAAGGAAAGATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SLVPILSAKVDPGNNGQQEVSIC*VRKDPQ Trigger: CTGAGGATCTTTCCTTACTCAACATATACTCACCTC...TTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR TCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTTCTGGACAATTGCTGTaGTTGTCGTCCTGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSSGQLL*LSSCHW Trigger: CCAGTGGCAGGACGACAATCACAGCAATTGTCCAGA...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | GAATCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCAGTGCAAAGGTGGACCTCTGGACAATTGCTGTaGTTGTCGTCCTGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: ESVFYVSPWCQFSVQRWTSGQLL*LSSCHW Trigger: CCAGTGGCAGGACGACAATCACAGCAATTGTCCAGA...GGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR GCA 90 bp | CTAGGGCAAGACCAGAATCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCAGGCCAGTCTGGACAATTaGTGTGATTGTCGTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LGQDQNLYFMSLPGANSQASLDN*CDCRPA Trigger: GGCAGGACGACAATCACAGCAATTGTCCAGACTGGC...CTGAGAATTGGCACCAGGGAGAGACATAAAATACAGATTCTGGTCTTGCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | AGTCTTCACACAGTGTGCCCTAGGGCAAGACCAGAATCTGTATTTTATGTCTCTAGTTCCCGGGCCACCTaGCAGATGGAAAAAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SLHTVCPRARPESVFYVSSSRAT*QMEKAQ Trigger: TTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACT...AGAGACATAAAATACAGATTCTGGTCTTGCCCTAGGGCACACTGTGTGAAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR TCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTCTCTATTCCAAGTGCTaGCCACAGTGTCTGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSLYSKC*PQCLAH Trigger: ATGTGCCAGACACTGTGGTCAGCACTTGGAATAGAG...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGTCCAATTCAGCCAGATaGTGCAAGTCCCATAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GKSNCSTERFERRVLGSKSNSAR*CKSHSQ Trigger: TTGGCTATGGGACTTGCATCATCTGGCTGAATTGGA...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGGATCCTCAGGACACCTaGAGAAGTTACTTCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: GKSNCSTERFERRVLGSKDPQDT*RSYFQT Trigger: GGTTTGGAAGTAACTTCTTCAGGTGTCCTGAGGATC...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGCTTCACCACAGCGCTaGCTGGTACATGGCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLASPQR*LVHGLS Trigger: TGAGAGGCCATGTACCAGCCAGCGCTGTGGTGAAGC...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGACTCTCCATAATGCCTaGCGATGTCACACTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GKSNCSTERFERRVLGSKTLHNA*RCHTQD Trigger: GTCTTGAGTGTGACATCGCCAGGCATTATGGAGAGT...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGGTCTCAGGAGCCTCTaGATCATGCCTCTGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVGLRSL*IMPLAH Trigger: ATGTGCCAGAGGCATGATTCAGAGGCTCCTGAGACC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGCAAGGCTTGCCTGGTaGTGTCCTCACAACAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVARLAW*CPHNSS Trigger: AGAGCTGTTGTGAGGACATCACCAGGCAAGCCTTGC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTTATGTCTCTCCCTGGTaGCAATTCTCAGTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSYVSPW*QFSVQR Trigger: CCTTTGCACTGAGAATTGGCACCAGGGAGAGACATA...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR TCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGCCTCTCTTCATCCCCTaGACTGCTGGTCCAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLPLFIP*TAGPIQ Trigger: CTGAATTGGACCAGCAGTTCAGGGGATGAAGAGAGG...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | AGAATCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCAGTGCAAAGGTGGACTATGTCTCTCCCTGGTaGCAATTCTCAGTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RICILCLSLVPILSAKVDYVSPW*QFSVQR Trigger: CCTTTGCACTGAGAATTGGCACCAGGGAGAGACATA...GTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTTCAATCATGGGGTTCTaGGCAACTGTCATTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSSIMGF*ATVIVF Trigger: GAAGACAATGACAGTTGCCCAGAACCCCATGATTGA...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGTTCTCAGTGCAAAGGTaGACCCAGGTAACAACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLFSVQR*TQVTTA Trigger: GGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAA...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGACGGAATCTAGTAACTaGAGCAAGGCTTGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVTESSN*SKACLV Trigger: CACCAGGCAAGCCTTGCTTCAGTTACTAGATTCCGT...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTGAAGATTCAGAAGGCTaGAAATTTCTGCCATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSEDSEG*KFLPCH Trigger: ATGGCATGGCAGAAATTTTCAGCCTTCTGAATCTTC...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGCTTCATCCCCTGAACTaGTGGTCCAATTCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLLHPLN*WSNSAR Trigger: TCTGGCTGAATTGGACCAGCAGTTCAGGGGATGAAG...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGCTTAGTCATTGGGACTaGACAGATTTCATAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKSNCSTERFERRVLGSKLSHWD*TDFIDL Trigger: CAAGTCTATGAAATCTGTGCAGTCCCAATGACTAAG...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR GCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGAGGAGGAGTTATCTTaGTGTCAAACCAGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVEEELS*CQTRVS Trigger: GGACACCCTGGTTTGACAGCAAGATAACTCCTCCTC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGCGCTGGCTGGTACATaGCCTCTCAAGTTGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVALAGT*PLKLEI Trigger: TATTTCCAACTTGAGAGGCCATGTACCAGCCAGCGC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGGCAAAATTTCACGTTaGGGAAAGGGCTCTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVGKISR*GKGSAI Trigger: GATTGCAGAGCCCTTTCCTCAACGTGAAATTTTGCC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR TCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGTGGTCTCCTCAAGTTTaGGCTATGGTAGATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLWSPQV*AMVDCH Trigger: GTGACAATCTACCATAGCTCAAACTTGAGGAGACCA...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGCAGACCCATAGAGAATaGTTGCTTAGGGTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVQTHRE*LLRVLN Trigger: GTTCAGAACCCTAAGCAACCATTCTCTATGGGTCTG...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGTCTGAATCATGCCTCTaGCACATGTCTTATGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLSESCL*HMSYGG Trigger: ACCTCCATAAGACATGTGCCAGAGGCATGATTCAGA...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGCACTTGACCGTTCCTTaGAAGATTCAGAAGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLHLTVP*KIQKAE Trigger: TTCAGCCTTCTGAATCTTCCAAGGAACGGTCAAGTG...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR CCA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTCCTTTGGCAATAAGCTaGTTTCTAAACTTCGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LGKSNCSTERFERRVLGSPLAIS*FLNFGL Trigger: TAATCCGAAGTTTAGAAACCAGCTTATTGCCAAAGG...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGAGGTGAGTATATGTTaGGTAAGGAAAGATCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLEVSIC*VRKDPQ Trigger: CTGAGGATCTTTCCTTACTCAACATATACTCACCTC...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGATTTATCTAGCTAAGTaGCACTTGACCGTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLIYLAK*HLTVPW Trigger: CCAAGGAACGGTCAAGTGGCACTTAGCTAGATAAAT...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGGTGTCCTTAGTCATTaGGACTGCACAGATTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVGVLSH*DCTDFI Trigger: TATGAAATCTGTGCAGTCCCAATGACTAAGGACACC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGTTGCTTAGGGTTCTaGACTTCAAAGCATTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: KNLGKSNCSTERFERRVLGCLGF*TSKHLL Trigger: CAATAAATGCTTTGAAGTTCAGAACCCTAAGCAACC...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTTGAATCCATCTTATaGAAGGTGGTCTCCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVFESIL*KVVSSS Trigger: ACTTGAGGAGACCACCTTTCATAAGATGGATTCAAA...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR TCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGCGCAGGTATTGTATTTaGATCCATCTTATGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVRRYCI*IHLMKG Trigger: ACCTTTCATAAGATGGATTCAAATACAATACCTGCG...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR GCA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGAGGAAAGGGCTCTaGAATCATAATTTGACATTA | + |
|
Preference number: 4 (lower is better) Translates to: SKNLGKSNCSTERFERRVLRKGL*NHNLTL Trigger: TAATGTCAAATTATGATTGCAGAGCCCTTTCCTCAA...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS GCA 90 bp | GACACTGAAGAGACCGGTGCTCCAGCCCCCGCCAGTCTGGACAATTaGTGTGATTGTCGTCCTGCCACTGGCTCCCCGAACAGGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DTEETGAPAPASLDN*CDCRPATGSPNRLL Trigger: AAGCAGCCTGTTCGGGGAGCCAGTGGCAGGACGACAATCACAGCAATTGTCCAGACTGGCGGGGGCTGGAGCACCGGTCTCTTCAGTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS CCA 90 bp | TCTCTGCAGACACTGAAGAGACCGGTGCTCCAGCCCCCGCCAGTCTaGACAATTGCTGTGATTGTCGTCCTGCCACTGGCTCCCCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: SLQTLKRPVLQPPPV*TIAVIVVLPLAPRT Trigger: TGTTCGGGGAGCCAGTGGCAGGACGACAATCACAGCAATTGTCCAGACTGGCGGGGGCTGGAGCACCGGTCTCTTCAGTGTCTGCAGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS-3UTR CAA 90 bp | GTCTCTCCCTGGTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCTGGGAGGTCCTCATCTaGAGTTCCCGGGCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSPWCQFSVQRWTQVTTAWEVLI*SSRATW Trigger: CCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCA...GGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS GCA 90 bp | ACAATTGCTGTGATTGTCGTCCTGCCACTGGCTCCCCGAACAGGCTaGTTCACCACAGCGCTGGCTGGTACATGGCCTCTCAAGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TIAVIVVLPLAPRTG*FTTALAGTWPLKLE Trigger: TTCCAACTTGAGAGGCCATGTACCAGCCAGCGCTGTGGTGAAGCAGCCTGTTCGGGGAGCCAGTGGCAGGACGACAATCACAGCAATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS-3UTR CAA 90 bp | GTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCCACAGATTTCATAGACTaGGGAGGTCCTCATCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPGPPGRWKKPNSSAPPATDFID*GGPHLE Trigger: CTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGT...GGCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CAA 90 bp | AGTTCCCGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTGCACCGCCAGCGTGTTTTCTTGTCCTTaGGGCTATCCTTTTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRATWQMEKAQQQCTASVFSCP*GYPFSL Trigger: AAGGGAAAAAGGATAGCCCAAAGGACAAGAAAACAC...GCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCGGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS TCA 90 bp | ATAATGCCTGGCGATGTCACAAAATTCTCCTATCTCTGCAGACACTaGAGAGACCGGTGCTCCAGCCCCCGCCAGTCTGGACAATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IMPGDVTKFSYLCRH*RDRCSSPRQSGQLL Trigger: CAGCAATTGTCCAGACTGGCGGGGGCTGGAGCACCGGTCTCTTCAGTGTCTGCAGAGATAGGAGAATTTTGTGACATCGCCAGGCATTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS TCA 90 bp | ACCCAGTCCAGACGGAATCTAGTAACTGAAGCAAGGCTTGCCTGGTaGTGTCCTCACAACAGCTCTGAATCCTCAAGGTCTCAGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TQSRRNLVTEARLAW*CPHNSSESSRSQEP Trigger: AGGCTCCTGAGACCTTGAGGATTCAGAGCTGTTGTGAGGACATCACCAGGCAAGCCTTGCTTCAGTTACTAGATTCCGTCTGGACTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 90 bp | GACAGAATAGACCACAGAAACAAATTCTCCTATCTCTGCAGACACTaGAGAGACCGGTGCTCCAGCCCCCGCCAGTCTGGACAATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DRIDHRNKFSYLCRH*RDRCSSPRQSGQLL Trigger: CAGCAATTGTCCAGACTGGCGGGGGCTGGAGCACCGGTCTCTTCAGTGTCTGCAGAGATAGGAGAATTTGTTTCTGTGGTCTATTCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS GCA 90 bp | GCCAGTCTTCACACAGTGTGCCCTGTATTTTATGTCTCTCCCTGGTaGCAATTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASLHTVCPVFYVSPW*QFSVQRWTQVTTAN Trigger: GTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGGGCACACTGTGTGAAGACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTGGGAGGTCCTCATCTaGAGTTCCCGGGCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKNLGKSNCSTERFERRVWEVLI*SSRATW Trigger: CCAGGTGGCCCGGGAACTCAAGATGAGGACCTCCCA...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGGGAGGAGGAGTTATCTaGCTGTCAAACCAGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKSNCSTERFERRVLGSKGGGVI*LSNQGV Trigger: GACACCCTGGTTTGACAGCAAGATAACTCCTCCTCC...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CCA 90 bp | CCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCAGTGCAAAGGTaGACCCAGGTAACAACGGCCAACAAAGACACTCTCCATAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVFYVSPWCQFSVQR*TQVTTANKDTLHNA Trigger: GGCATTATGGAGAGTGTCTTTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | CCTAGGGCAAGACCAGAATCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCAGGAGGAGGAGTTATCTaGCTGTCAAACCAGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRARPESVFYVSPWCQFSGGGVI*LSNQGV Trigger: GACACCCTGGTTTGACAGCAAGATAACTCCTCCTCC...TGAGAATTGGCACCAGGGAGAGACATAAAATACAGATTCTGGTCTTGCCCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CAA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGGTGGTCTCCTCAAGTTaGAGCTATGGTAGATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKSNCSTERFERRVLGSKVVSSS*SYGRLS Trigger: TGACAATCTACCATAGCTCAAACTTGAGGAGACCAC...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGACAGATTTCATAGACTaGGGAGGTCCTCATCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKSNCSTERFERRVLGSKTDFID*GGPHLE Trigger: CTCAAGATGAGGACCTCCCAAGTCTATGAAATCTGT...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR CAA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGTTCCACTGAGAGGTTaGAGAGGAGGGTGTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KNLGKSNCSTERFERRVLVPLRG*RGGCWG Trigger: TCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAAC...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGTGCAAAGGTGGACCCAGGTAACAACGGCCAACAAAGACACTCTCCATAGAGGTGAGTATATGTaGAGTAAGGAAAGATCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVQRWTQVTTANKDTLHRGEYM*SKERSS Trigger: TGAGGATCTTTCCTTACTCAACATATACTCACCTCT...ATGGAGAGTGTCTTTGTTGGCCGTTGTTACCTGGGTCCACCTTTGCACTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CAA 90 bp | GGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAAGGCGCAGGTATTGTATTaGAATCCATCTTATGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSNCSTERFERRVLGSKAQVLY*NPSYER Trigger: CCTTTCATAAGATGGATTCAAATACAATACCTGCGC...CTTACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR CAA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGCTAGCTAAGTGCCACTaGACCGTTCCTTGGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SKNLGKSNCSTERFERRVLAKCH*TVPWKI Trigger: AATCTTCCAAGGAACGGTCAAGTGGCACTTAGCTAG...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR CAA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTCTATCCTTTTTCCCTTaGGCAATAAGCTGGTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LGKSNCSTERFERRVLGSLSFFP*AISWFL Trigger: TAGAAACCAGCTTATTGCCAAAGGGAAAAAGGATAG...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
||
| CDS-3UTR CAA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTAGAGGTGAGTATATGTaGAGTAAGGAAAGATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LGKSNCSTERFERRVLGSRGEYM*SKERSS Trigger: TGAGGATCTTTCCTTACTCAACATATACTCACCTCT...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGACCCATAGAGAATGGTaGCTTAGGGTTCTGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: KNLGKSNCSTERFERRVLTHREW*LRVLNF Trigger: GAAGTTCAGAACCCTAAGCAACCATTCTCTATGGGT...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGAGCTATGGTAGATaGTCACAAGCCTCAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SKNLGKSNCSTERFERRVLSYGR*SQASKP Trigger: AGGCTTTGAGGCTTGTGACAATCTACCATAGCTCAA...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | TTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGGGGAGTCTTTCAGCGCAGGTATaGTATTTGAATCCATCTTAT | + |
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Preference number: 5 (lower is better) Translates to: LGKSNCSTERFERRVLGSLSAQV*YLNPSY Trigger: ATAAGATGGATTCAAATACAATACCTGCGCTGAAAG...ACTCCCCAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | CCTAGGGCAAGACCAGAATCTGTATTTTATGTCTCTCCCTGGTGCCAATTCTCAACATGGCCTCTCAAGTaGGAAATAAAATGTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: PRARPESVFYVSPWCQFSTWPLK*EIKCSS Trigger: AGATGAACATTTTATTTCCAACTTGAGAGGCCATGT...TGAGAATTGGCACCAGGGAGAGACATAAAATACAGATTCTGGTCTTGCCCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS-3UTR CAA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGGTGTTTTCTTGTCCTTaGGGCTATCCTTTTTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: SKNLGKSNCSTERFERRVVFSCP*GYPFSL Trigger: AAGGGAAAAAGGATAGCCCAAAGGACAAGAAAACAC...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CCA 90 bp | AAATTCTCTGCTCTTCCATTAACTTCATTGATAATGCCAGGAAAGTaGCATTTCTTTCCTACCCAGTCCAGACGGAATCTAGTAACTGAA | + |
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Preference number: 5 (lower is better) Translates to: KFSALPLTSLIMPGK*HFFPTQSRRNLVTE Trigger: TTCAGTTACTAGATTCCGTCTGGACTGGGTAGGAAAGAAATGCCACTTTCCTGGCATTATCAATGAAGTTAATGGAAGAGCAGAGAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 90 bp | GTATTGTATTTGAATCCATCTTATGAAAGGTGGTCTCCTCAAGTTTaGGCTATGGTAGATTGTCACAAGCCTCAAAGCCTTTTCAGAACT | + |
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Preference number: 5 (lower is better) Translates to: VLYLNPSYERWSPQV*AMVDCHKPQSLFRT Trigger: AGTTCTGAAAAGGCTTTGAGGCTTGTGACAATCTACCATAGCTCAAACTTGAGGAGACCACCTTTCATAAGATGGATTCAAATACAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | AAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGTTGATCTGTAGGGAGATATaGCTGGAGTATAGAGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: KNLGKSNCSTERFERRVLICREI*LEYRVN Trigger: ATTTACTCTATACTCCAGCAATATCTCCCTACAGAT...CAACACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS-3UTR CAA 90 bp | AGTAAAAACTTAGGAAAAAGCAATTGTTCCACTGAGAGGTTTGAGAGGAGGGTGACATGGCCTCTCAAGTaGGAAATAAAATGTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: SKNLGKSNCSTERFERRVTWPLK*EIKCSS Trigger: AGATGAACATTTTATTTCCAACTTGAGAGGCCATGT...CACCCTCCTCTCAAACCTCTCAGTGGAACAATTGCTTTTTCCTAAGTTTTTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS GCA 90 bp | ATTGTCACAAGCCTCAAAGCCTTTTCAGAACTTCTAGAAATTCTCTaGTCTTCCATTAACTTCATTGATAATGCCAGGAAAGTGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: IVTSLKAFSELLEIL*SSINFIDNARKVAF Trigger: AAATGCCACTTTCCTGGCATTATCAATGAAGTTAATGGAAGAGCAGAGAATTTCTAGAAGTTCTGAAAAGGCTTTGAGGCTTGTGACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 90 bp | TATATTCTTTTCATCAGACCCATAGAGAATGGTTGCTTAGGGTTCTaGACTTCAAAGCATTTATTGAACCAGGTTGTTAGGAAAAGCCTA | + |
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Preference number: 5 (lower is better) Translates to: YILFIRPIENGCLGF*TSKHLLNQVVRKSL Trigger: TAGGCTTTTCCTAACAACCTGGTTCAATAAATGCTTTGAAGTTCAGAACCCTAAGCAACCATTCTCTATGGGTCTGATGAAAAGAATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 72 bp | CGGTGCTCCAGCCCCCGCCAGTCTGGACAATTGCTGTaGTTGTCGTCCTGCCACTGGCTCCCCGAACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RCSSPRQSGQLL*LSSCHWLPEQA Trigger: AGCCTGTTCGGGGAGCCAGTGGCAGGACGACAATCACAGCAATTGTCCAGACTGGCGGGGGCTGGAGCACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS GCA 72 bp | GAGACCGGTGCTCCAGCCCCCGCCAGTCTGGACAATTaGTGTGATTGTCGTCCTGCCACTGGCTCCCCGAAC | + |
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Preference number: 6 (lower is better) Translates to: ETGAPAPASLDN*CDCRPATGSPN Trigger: GTTCGGGGAGCCAGTGGCAGGACGACAATCACAGCAATTGTCCAGACTGGCGGGGGCTGGAGCACCGGTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS GCA 72 bp | GTGATTGTCGTCCTGCCACTGGCTCCCCGAACAGGCTaGTTCACCACAGCGCTGGCTGGTACATGGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VIVVLPLAPRTG*FTTALAGTWPL Trigger: GAGAGGCCATGTACCAGCCAGCGCTGTGGTGAAGCAGCCTGTTCGGGGAGCCAGTGGCAGGACGACAATCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS GCA 72 bp | CGGGCCACCTGGCAGATGGAAAAAGCCCAACAGCAGTaGACCGCCAGCCAGTCTTCACACAGTGTGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RATWQMEKAQQQ*TASQSSHSVPC Trigger: ACAGGGCACACTGTGTGAAGACTGGCTGGCGGTGCACTGCTGTTGGGCTTTTTCCATCTGCCAGGTGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CCA 72 bp | ACACTGAAGAGACCGGTGCTCCAGCCCCCGCCAGTCTaGACAATTGCTGTGATTGTCGTCCTGCCACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TLKRPVLQPPPV*TIAVIVVLPLA Trigger: AGCCAGTGGCAGGACGACAATCACAGCAATTGTCCAGACTGGCGGGGGCTGGAGCACCGGTCTCTTCAGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS TCA 72 bp | GGCGATGTCACAAAATTCTCCTATCTCTGCAGACACTaGAGAGACCGGTGCTCCAGCCCCCGCCAGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GDVTKFSYLCRH*RDRCSSPRQSG Trigger: TCCAGACTGGCGGGGGCTGGAGCACCGGTCTCTTCAGTGTCTGCAGAGATAGGAGAATTTTGTGACATCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS TCA 72 bp | GACCACAGAAACAAATTCTCCTATCTCTGCAGACACTaGAGAGACCGGTGCTCCAGCCCCCGCCAGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: DHRNKFSYLCRH*RDRCSSPRQSG Trigger: TCCAGACTGGCGGGGGCTGGAGCACCGGTCTCTTCAGTGTCTGCAGAGATAGGAGAATTTGTTTCTGTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CCA 72 bp | GGCTCCCCGAACAGGCTGCTTCACCACAGCGCTGGCTaGTACATGGCCTCTCAAGTTGGAAATAAAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSPNRLLHHSAG*YMASQVGNKMF Trigger: GAACATTTTATTTCCAACTTGAGAGGCCATGTACCAGCCAGCGCTGTGGTGAAGCAGCCTGTTCGGGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000311450.9 ENST00000512998.1 |
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| CDS TCA 72 bp | CTTCATCCCCTGAACTGCTGGTCCAATTCAGCCAGATaGTGCAAGTCCCATAGCCAACCCAAAAGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LHPLNCWSNSAR*CKSHSQPKSRS Trigger: GCTCCTGCTTTTGGGTTGGCTATGGGACTTGCATCATCTGGCTGAATTGGACCAGCAGTTCAGGGGATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS GCA 72 bp | CACACAGTGTGCCCTGTATTTTATGTCTCTCCCTGGTaGCAATTCTCAGTGCAAAGGTGGACCCAGGTAACA | + |
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Preference number: 6 (lower is better) Translates to: HTVCPVFYVSPW*QFSVQRWTQVT Trigger: TGTTACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGGGCACACTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CCA 72 bp | CTTCACACAGTGTGCCCTGTATTTTATGTCTCTCCCTaGTGCCAATTCTCAGTGCAAAGGTGGACCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LHTVCPVFYVSP*CQFSVQRWTQV Trigger: TACCTGGGTCCACCTTTGCACTGAGAATTGGCACCAGGGAGAGACATAAAATACAGGGCACACTGTGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 72 bp | AGACGGAATCTAGTAACTGAAGCAAGGCTTGCCTGGTaGTGTCCTCACAACAGCTCTGAATCCTCAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RRNLVTEARLAW*CPHNSSESSRS Trigger: AGACCTTGAGGATTCAGAGCTGTTGTGAGGACATCACCAGGCAAGCCTTGCTTCAGTTACTAGATTCCGTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 72 bp | TTTCTTTCCTACCCAGTCCAGACGGAATCTAGTAACTaGAGCAAGGCTTGCCTGGTGATGTCCTCACAACAG | + |
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Preference number: 6 (lower is better) Translates to: FLSYPVQTESSN*SKACLVMSSQQ Trigger: CTGTTGTGAGGACATCACCAGGCAAGCCTTGCTTCAGTTACTAGATTCCGTCTGGACTGGGTAGGAAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 72 bp | AAGATTCAGAAGGCTGAAAATTTCTGCCATGCCATGTaGCTGAGAAGCAGCAGAGACCTCTCTTCATCCCCT | + |
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Preference number: 6 (lower is better) Translates to: KIQKAENFCHAM*LRSSRDLSSSP Trigger: AGGGGATGAAGAGAGGTCTCTGCTGCTTCTCAGTCACATGGCATGGCAGAAATTTTCAGCCTTCTGAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CCA 72 bp | GTAACAACGGCCAACAAAGACACTCTCCATAATGCCTaGCGATGTCACAAAATTCTCCTATCTCTGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: VTTANKDTLHNA*RCHKILLSLQT Trigger: TGTCTGCAGAGATAGGAGAATTTTGTGACATCGCCAGGCATTATGGAGAGTGTCTTTGTTGGCCGTTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512998.1 |
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| CDS CCA 72 bp | AACATTTATCTAGCTAAGTGCCACTTGACCGTTCCTTaGAAGATTCAGAAGGCTGAAAATTTCTGCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: NIYLAKCHLTVP*KIQKAENFCHA Trigger: GGCATGGCAGAAATTTTCAGCCTTCTGAATCTTCCAAGGAACGGTCAAGTGGCACTTAGCTAGATAAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 72 bp | TTGAATCCATCTTATGAAAGGTGGTCTCCTCAAGTTTaGGCTATGGTAGATTGTCACAAGCCTCAAAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LNPSYERWSPQV*AMVDCHKPQSL Trigger: AAGGCTTTGAGGCTTGTGACAATCTACCATAGCTCAAACTTGAGGAGACCACCTTTCATAAGATGGATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 72 bp | TTCATCAGACCCATAGAGAATGGTTGCTTAGGGTTCTaGACTTCAAAGCATTTATTGAACCAGGTTGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: FIRPIENGCLGF*TSKHLLNQVVR Trigger: CCTAACAACCTGGTTCAATAAATGCTTTGAAGTTCAGAACCCTAAGCAACCATTCTCTATGGGTCTGATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS TCA 72 bp | TCTTTCAGCGCAGGTATTGTATTTGAATCCATCTTATaGAAGGTGGTCTCCTCAAGTTTGAGCTATGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SFSAGIVFESIL*KVVSSSLSYGR Trigger: TCTACCATAGCTCAAACTTGAGGAGACCACCTTTCATAAGATGGATTCAAATACAATACCTGCGCTGAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CAA 90 bp | CACCTAACTGTGGACACATTCATCTTACTAATCTGTAGGGAGATATaGCTGGAGTATAGAGTAAATAGAAGAAAAAGACTTATCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: HLTVDTFILLICREI*LEYRVNRRKRLIFG Trigger: ACCAAAGATAAGTCTTTTTCTTCTATTTACTCTATACTCCAGCAATATCTCCCTACAGATTAGTAAGATGAATGTGTCCACAGTTAGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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| CDS CAA 72 bp | GTGGACACATTCATCTTACTAATCTGTAGGGAGATATaGCTGGAGTATAGAGTAAATAGAAGAAAAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: VDTFILLICREI*LEYRVNRRKRL Trigger: AAGTCTTTTTCTTCTATTTACTCTATACTCCAGCAATATCTCCCTACAGATTAGTAAGATGAATGTGTCCAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311450.9 |
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