Pregenerated sensors for PLAC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170965Ensembl transcript IDs: ENST00000359237.9, ENST00000466797.1, ENST00000473897.1, ENST00000476971.5
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTCATGAAGTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATaGGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATA | + |
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Preference number: 1 (lower is better) Translates to: IHEVAIGFSFSKVLT*GSQEHLFVRHLYTI Trigger: TATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCAACTTCATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| 3UTR CAA 90 bp | TCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTaGTCAGACATTTGTACACTATATACTAATTCTAGAAATAGCATC | + |
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Preference number: 2 (lower is better) Translates to: SLSQKCSHEGHKSTY*SDICTLYTNSRNSI Trigger: GATGCTATTTCTAGAATTAGTATATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| 3UTR TCA 72 bp | GTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATaGGGGTCACAAGAGCACTTATTTGTCAGACATTTG | + |
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Preference number: 3 (lower is better) Translates to: VAIGFSFSKVLT*GSQEHLFVRHL Trigger: CAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | AGTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCATGGAGCAGGGCTTGGTaGGCCATGGGGACTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SCYRFLFLKSAHMRVTRAWSRAW*AMGTFG Trigger: CCCAAAAGTCCCCATGGCTCACCAAGCCCTGCTCCA...TGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | CTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACACTGTGGCCCTGCTCTTaGTGGCTACTCTCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LFLKSAHMRVTRALICQTLWPCS*WLLSWS Trigger: GCTCCATGAGAGTAGCCAGCAAGAGCAGGGCCACAG...TGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | GTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAAGCCTCCTGAGCCCCTaGTTGGTGACAAGGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: VSLSQKCSHEGHKSTYLSSLLSP*LVTRDL Trigger: CAGGTCCCTTGTCACCAAGCAGGGGCTCAGGAGGCT...TGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | TGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTCATCCTTCTGGGCTGTaGCCCTGCTCTTGCTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: CYRFLFLKSAHMRVTRALHPSGL*PCSCWL Trigger: TAGCCAGCAAGAGCAGGGCCACAGCCCAGAAGGATG...AAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | TGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTTCGCAGTTGGGCCTTTaGCTGGACTGTGACAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: CYRFLFLKSAHMRVTRALSQLGL*LDCDKL Trigger: CAGCTTGTCACAGTCCAGTCAAAGGCCCAACTGCGA...AAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | AAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATCTGGGCTGTGGCCCTaGTCTTGCTGGCTACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KCSHEGHKSTYLSDICTLSGLWP*SCWLLS Trigger: TGAGAGTAGCCAGCAAGAGCAGGGCCACAGCCCAGA...TAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | AAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTGGCTGAACATGGTTTaGGGGGCAACCCAGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KSAHMRVTRALICQTFVHWLNMV*GATQAQ Trigger: TTGGGCCTGGGTTGCCCCCCAAACCATGTTCAGCCA...GTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | AAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTGGCCCTGCTCTTGCTaGCTACTCTCATGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSAHMRVTRALICQTFVHWPCSC*LLSWSR Trigger: CCTGCTCCATGAGAGTAGCCAGCAAGAGCAGGGCCA...GTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | GTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCACAGGAAGCCGTCCAGTaGGGATTTCTTCTTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VSLSQKCSHEGHKSTYLSQEAVQ*GFLLLA Trigger: TGCCAGAAGAAGAAATCCTCACTGGACGGCTTCCTG...TGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | CTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACACCTTTGACTGGACTGTaGCAAGCTGAACACCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: LFLKSAHMRVTRALICQTPLTGL*QAEHLV Trigger: TACGAGGTGTTCAGCTTGTCACAGTCCAGTCAAAGG...TGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | GTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGTGGACAATCGCAGTTaGGCCTTTGACTGGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: VSLSQKCSHEGHKSTYLSVDNRS*AFDWTV Trigger: CACAGTCCAGTCAAAGGCCCAACTGCGATTGTCCAC...TGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | CTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTCTGAAAACGCAGAGGTaGGGAGGATCATCAGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: LSQKCSHEGHKSTYLSDILKTQR*GGSSVL Trigger: TAGGACTGATGATCCTCCTCACCTCTGCGTTTTCAG...AATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | CTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTAGCATGAAGGGGTaGACTGTGACCATGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: LFLKSAHMRVTRALICQTFSMKG*TVTMNQ Trigger: CTGGTTCATGGTCACAGTGCACCCCTTCATGCTAAA...TGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | TGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTCAAGGGACCTGGGTATaGTCTTCTTCACTGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: CYRFLFLKSAHMRVTRALQGTWV*SSSLKT Trigger: TGTCTTCAGTGAAGAAGAGCATACCCAGGTCCCTTG...AAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | AGTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACCCAAGTGTAGTTCATaGAAGTGTACACACACATCG | + |
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Preference number: 4 (lower is better) Translates to: SCYRFLFLKSAHMRVTRAPKCSS*KCTHTS Trigger: CGATGTGTGTGTACACTTTCATGAACTACACTTGGG...TGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | TCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTAGGGAAGAAGGAACTTaGTGTGTCTGTATTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SQKCSHEGHKSTYLSDICREEGT*CVCICP Trigger: GGGGCAAATACAGACACAGCAAGTTCCTTCTTCCCT...ACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | AGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATACTGGTGAAGGCAGCTaGCAAATTTCCAAAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SAHMRVTRALICQTFVHYTGEGS*QISKGK Trigger: CTTCCCTTTGGAAATTTGGCAGCTGCCTTCACCAGT...ATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | GAAAAAGGCTTAATTCATGAAGTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCGAACTGGTAGGCGTGTaGCTGAACATGGTTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: EKGLIHEVAIGFSFSKVLELVGV*LNMVWG Trigger: CCCCCAAACCATGTTCAGCCACACGCCTACCAGTTC...GAGCACTTTTGAGAAAGAGAAACCTATAGCAACTTCATGAATTAAGCCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | AGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATATCAAGAAAGTGAGATaGCTGCAGAGGTTGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SAHMRVTRALICQTFVHYIKKVR*LQRLSL Trigger: GAGGCTCAACCTCTGCAGCCATCTCACTTTCTTGAT...ATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | TCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTTCAAAAGTGCTCACATaGGGGTCACAAGAGCACTTA | + |
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Preference number: 4 (lower is better) Translates to: SQKCSHEGHKSTYLSDICSKVLT*GSQEHL Trigger: TAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGA...ACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | CTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACAGATCACAAACTTAGATaGCGTGCCCTTAGAAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: LFLKSAHMRVTRALICQTDHKLR*RALRRV Trigger: TACTCTTCTAAGGGCACGCCATCTAAGTTTGTGATC...TGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | GAAAAAGGCTTAATTCATGAAGTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCCTTTGTGCTCACTGGTaGAGGCAGCTGCCAAATTTC | + |
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Preference number: 4 (lower is better) Translates to: EKGLIHEVAIGFSFSKVLLCAHW*RQLPNF Trigger: GAAATTTGGCAGCTGCCTTCACCAGTGAGCACAAAG...GAGCACTTTTGAGAAAGAGAAACCTATAGCAACTTCATGAATTAAGCCTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | GTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCATATGCTCTTCTTCACTaGAGACACAAGGTGGACAAT | + |
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Preference number: 4 (lower is better) Translates to: VSLSQKCSHEGHKSTYLSYALLH*RHKVDN Trigger: ATTGTCCACCTTGTGTCTTCAGTGAAGAAGAGCATA...TGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR GCA 90 bp | TCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTTGCTGTGTCTGTATTTaGCCCCAGGATTGGAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SQKCSHEGHKSTYLSDICCCVCI*PQDWKN Trigger: ATTTTTCCAATCCTGGGGGCAAATACAGACACAGCA...ACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CCA 90 bp | CTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTAAACCTGAGGATCACATaGACCCAATCATATCATCTG | + |
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Preference number: 4 (lower is better) Translates to: LKSAHMRVTRALICQTFVNLRIT*TQSYHL Trigger: CAGATGATATGATTGGGTCCATGTGATCCTCAGGTT...TACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | GAAAAAGGCTTAATTCATGAAGTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCTGGACTGTGACAAGCTaGACACCTCGTAGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: EKGLIHEVAIGFSFSKVLWTVTS*TPRSIS Trigger: AGAAATGCTACGAGGTGTTCAGCTTGTCACAGTCCA...GAGCACTTTTGAGAAAGAGAAACCTATAGCAACTTCATGAATTAAGCCTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR TCA 90 bp | AGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATATCATATCATCTGTGTaGAGAGACCAATCCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SAHMRVTRALICQTFVHYIISSV*RDQSSE Trigger: TTCTGAGGATTGGTCTCTTCACACAGATGATATGAT...ATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS TCA 90 bp | GAGCCCCTGCTTGGTGACAAGGGACCTGGGTATGCTCTTCTTCACTaGAGACACAAGGTGGACAATCGCAGTTGGGCCTTTGACTGGACT | + |
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Preference number: 5 (lower is better) Translates to: EPLLGDKGPGYALLH*RHKVDNRSWAFDWT Trigger: AGTCCAGTCAAAGGCCCAACTGCGATTGTCCACCTTGTGTCTTCAGTGAAGAAGAGCATACCCAGGTCCCTTGTCACCAAGCAGGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS GCA 90 bp | ATCAAGAAAGTGAGATGGCTGCAGAGGTTGAGCCTCCTGAGCCCCTaGTTGGTGACAAGGGACCTGGGTATGCTCTTCTTCACTGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: IKKVRWLQRLSLLSP*LVTRDLGMLFFTED Trigger: GTCTTCAGTGAAGAAGAGCATACCCAGGTCCCTTGTCACCAAGCAGGGGCTCAGGAGGCTCAACCTCTGCAGCCATCTCACTTTCTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS TCA 90 bp | GAAGACACAAGGTGGACAATCGCAGTTGGGCCTTTGACTGGACTGTaGCAAGCTGAACACCTCGTAGCATTTCTCATCCTTCTGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: EDTRWTIAVGPLTGL*QAEHLVAFLILLGC Trigger: ACAGCCCAGAAGGATGAGAAATGCTACGAGGTGTTCAGCTTGTCACAGTCCAGTCAAAGGCCCAACTGCGATTGTCCACCTTGTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS-3UTR CAA 90 bp | CTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACAAGATGGCTGCAGAGGTaGAGCCTCCTGAGCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LFLKSAHMRVTRALICQTRWLQR*SLLSPC Trigger: GCAGGGGCTCAGGAGGCTCAACCTCTGCAGCCATCT...TGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS CCA 90 bp | ATCTGTGTGAAGAGACCAATCCTCAGAAATATCAAGAAAGTGAGATaGCTGCAGAGGTTGAGCCTCCTGAGCCCCTGCTTGGTGACAAGG | + |
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Preference number: 5 (lower is better) Translates to: ICVKRPILRNIKKVR*LQRLSLLSPCLVTR Trigger: CCTTGTCACCAAGCAGGGGCTCAGGAGGCTCAACCTCTGCAGCCATCTCACTTTCTTGATATTTCTGAGGATTGGTCTCTTCACACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCACTCCTGAGCCCCTGCTaGGTGACAAGGGACCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VSLSQKCSHEGHKSTYLSLLSPC*VTRDLG Trigger: ACCCAGGTCCCTTGTCACCAAGCAGGGGCTCAGGAG...TGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CAA 90 bp | TGCTATAGGTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTCTCATGGAGCAGGGCTaGGTGAGCCATGGGGACTTT | + |
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Preference number: 5 (lower is better) Translates to: CYRFLFLKSAHMRVTRALLMEQG*VSHGDF Trigger: AAAGTCCCCATGGCTCACCAAGCCCTGCTCCATGAG...AAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAACCTATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS GCA 90 bp | GGTGAGGAGGATCATCAGTCCTATGAACTTAAAAACTTTCATCCCTaGAGCCAATCAGATAATGAACCACAGGAAACAGGAAGCCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GEEDHQSYELKNFHP*SQSDNEPQETGSRP Trigger: TGGACGGCTTCCTGTTTCCTGTGGTTCATTATCTGATTGGCTGCAGGGATGAAAGTTTTTAAGTTCATAGGACTGATGATCCTCCTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000359237.9 ENST00000473897.1 ENST00000476971.5 |
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| CDS-3UTR CAA 90 bp | CTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTAAGCACAGCACAGTCATaGGACTTTGTCCTGAACCGG | + |
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Preference number: 5 (lower is better) Translates to: LKSAHMRVTRALICQTFVSTAQS*DFVLNR Trigger: CCGGTTCAGGACAAAGTCCAATGACTGTGCTGTGCT...TACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CAA 90 bp | CATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATATACTAATGCTGTGGCCCTGCTCTaGCTGGCTACTCTCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: HEGHKSTYLSDICTLYTNAVALL*LATLME Trigger: CTCCATGAGAGTAGCCAGCAAGAGCAGGGCCACAGC...ATTAGTATATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS GCA 90 bp | CTGCCAAATTTCCAAAGGGAAGAAGGAACTTGCTGTGTCTGTATTTaGCCCCAGGATTGGAAAAATGTATCTCAGTCACTGGAACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LPNFQREEGTCCVCI*PQDWKNVSQSLELK Trigger: CTTCAGTTCCAGTGACTGAGATACATTTTTCCAATCCTGGGGGCAAATACAGACACAGCAAGTTCCTTCTTCCCTTTGGAAATTTGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CAA 90 bp | AGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATTGTACACACACATCGTaGTTTAGCATGAAGGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SAHMRVTRALICQTFVHYCTHTS*FSMKGC Trigger: GCACCCCTTCATGCTAAACAACGATGTGTGTGTACA...ATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTTTCTCAAAAGTGCTCACATGAGGGTCACAAGAGCACTTATTTGTCATATTTGCCCCCAGGATaGGAAAAATGTATCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: VSLSQKCSHEGHKSTYLSYLPPG*EKCISV Trigger: GACTGAGATACATTTTTCCAATCCTGGGGGCAAATA...TGACAAATAAGTGCTCTTGTGACCCTCATGTGAGCACTTTTGAGAAAGAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CAA 90 bp | GAAAAAGGCTTAATTCATGAAGTTGCTATAGGTTTCTCTTTCTCAAAAGTGCTCTTGCTGTGTCTGTATTaGCCCCCAGGATTGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: EKGLIHEVAIGFSFSKVLLLCLY*PPGLEK Trigger: TTTTTCCAATCCTGGGGGCAAATACAGACACAGCAA...GAGCACTTTTGAGAAAGAGAAACCTATAGCAACTTCATGAATTAAGCCTTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS-3UTR CAA 90 bp | CATGAGGGTCACAAGAGCACTTATTTGTCAGACATTTGTACACTATATACTAATCACAAGAGCACTTATTaGTCAGACATTTGTACACTA | + |
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Preference number: 5 (lower is better) Translates to: HEGHKSTYLSDICTLYTNHKSTY*SDICTL Trigger: TAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTG...ATTAGTATATAGTGTACAAATGTCTGACAAATAAGTGCTCTTGTGACCCTCATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS GCA 72 bp | TTTGGAGTTCATGAGGATGGACGCACAGGCAGTATGTaGCCCAAAGCCCTTGACCAGGCAGTAATGGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FGVHEDGRTGSM*PKALDQAVMGA Trigger: GGCCCCCATTACTGCCTGGTCAAGGGCTTTGGGGCACATACTGCCTGTGCGTCCATCCTCATGAACTCCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476971.5 |
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| CDS CAA 72 bp | AGATGGCTGCAGAGGTTGAGCCTCCTGAGCCCCTGCTaGGTGACAAGGGACCTGGGTATGCTCTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: RWLQRLSLLSPC*VTRDLGMLFFT Trigger: AGTGAAGAAGAGCATACCCAGGTCCCTTGTCACCAAGCAGGGGCTCAGGAGGCTCAACCTCTGCAGCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS TCA 72 bp | TTTGTCCTGTGGAGTAGCGGGGAGATTTGGAGTTCATaGGGATGGACGCACAGGCAGTATGTGCCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FVLWSSGEIWSS*GWTHRQYVPQS Trigger: GCTTTGGGGCACATACTGCCTGTGCGTCCATCCTCATGAACTCCAAATCTCCCCGCTACTCCACAGGACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476971.5 |
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| CDS CAA 90 bp | AAGAAAGTGAGATGGCTGCAGAGGTTGAGCCTCCTGAGCCCCTGCTaGGTGACAAGGGACCTGGGTATGCTCTTCTTCACTGAAGACACA | + |
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Preference number: 6 (lower is better) Translates to: KKVRWLQRLSLLSPC*VTRDLGMLFFTEDT Trigger: TGTGTCTTCAGTGAAGAAGAGCATACCCAGGTCCCTTGTCACCAAGCAGGGGCTCAGGAGGCTCAACCTCTGCAGCCATCTCACTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS CAA 90 bp | AGACCAATCCTCAGAAATATCAAGAAAGTGAGATGGCTGCAGAGGTaGAGCCTCCTGAGCCCCTGCTTGGTGACAAGGGACCTGGGTATG | + |
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Preference number: 6 (lower is better) Translates to: RPILRNIKKVRWLQR*SLLSPCLVTRDLGM Trigger: CATACCCAGGTCCCTTGTCACCAAGCAGGGGCTCAGGAGGCTCAACCTCTGCAGCCATCTCACTTTCTTGATATTTCTGAGGATTGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS TCA 72 bp | AATCGCAGTTGGGCCTTTGACTGGACTGTGACAAGCTaGACACCTCGTAGCATTTCTCATCCTTCTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NRSWAFDWTVTS*TPRSISHPSGL Trigger: CAGCCCAGAAGGATGAGAAATGCTACGAGGTGTTCAGCTTGTCACAGTCCAGTCAAAGGCCCAACTGCGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS TCA 72 bp | CTTGGTGACAAGGGACCTGGGTATGCTCTTCTTCACTaGAGACACAAGGTGGACAATCGCAGTTGGGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LGDKGPGYALLH*RHKVDNRSWAF Trigger: AAAGGCCCAACTGCGATTGTCCACCTTGTGTCTTCAGTGAAGAAGAGCATACCCAGGTCCCTTGTCACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS TCA 72 bp | AGGTGGACAATCGCAGTTGGGCCTTTGACTGGACTGTaGCAAGCTGAACACCTCGTAGCATTTCTCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: RWTIAVGPLTGL*QAEHLVAFLIL Trigger: AAGGATGAGAAATGCTACGAGGTGTTCAGCTTGTCACAGTCCAGTCAAAGGCCCAACTGCGATTGTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359237.9 ENST00000476971.5 |
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| CDS TCA 72 bp | CAGTCTCGTTTTCTTTGTCCAAAGGGTGGCACTCCTTaGCAGACTCCTCGTGTAAGTTTTCCTCGGGAATGT | + |
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Preference number: 6 (lower is better) Translates to: QSRFLCPKGGTP*QTPRVSFPREC Trigger: ACATTCCCGAGGAAAACTTACACGAGGAGTCTGTCAAGGAGTGCCACCCTTTGGACAAAGAAAACGAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466797.1 |
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| CDS GCA 72 bp | AAGTGTACACACACATCGTTGTTTAGCATGAAGGGGTaGACTGTGACCATGAACCAGTCTATGGAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: KCTHTSLFSMKG*TVTMNQSMEHS Trigger: GCTGTGCTCCATAGACTGGTTCATGGTCACAGTGCACCCCTTCATGCTAAACAACGATGTGTGTGTACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000359237.9 ENST00000473897.1 ENST00000476971.5 |
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| CDS CAA 72 bp | TCAGTCTCGTTTTCTTTGTCCAAAGGGTGGCACTCCTaGACAGACTCCTCGTGTAAGTTTTCCTCGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: SVSFSLSKGWHS*TDSSCKFSSGM Trigger: CATTCCCGAGGAAAACTTACACGAGGAGTCTGTCAAGGAGTGCCACCCTTTGGACAAAGAAAACGAGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466797.1 |
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| CDS CAA 90 bp | GAGGATTTCTTCTTCTGGCAGCTGGGGATAATTTGTCAGTTTCCTTaGAAATGTGGCTTTGTGCTCACTGGTGAAGGCAGCAAAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: EDFFFWQLGIICQFP*KCGFVLTGEGSKGW Trigger: CCACCCTTTGCTGCCTTCACCAGTGAGCACAAAGCCACATTTCAAAGGAAACTGACAAATTATCCCCAGCTGCCAGAAGAAGAAATCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473897.1 |
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| CDS CAA 90 bp | ATACTTGCCTTTCTCCTTCAGACTTCGTTGTCAGTCTCGTTTTCTTaGTCCTGTGGAGTAGCGGGGAGATTTGGAGTTCATGAGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: ILAFLLQTSLSVSFS*SCGVAGRFGVHEDG Trigger: TCCATCCTCATGAACTCCAAATCTCCCCGCTACTCCACAGGACAAAGAAAACGAGACTGACAACGAAGTCTGAAGGAGAAAGGCAAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476971.5 |
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| CDS TCA 72 bp | CCCAGGATTGGAAAAATGTATCTCAGTCACTGGAACTaGAGAGGGGTGGCCTTTACCTTCATAGGAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PRIGKMYLSHWN*RGVAFTFIGES Trigger: TGACTCTCCTATGAAGGTAAAGGCCACCCCTCTTCAGTTCCAGTGACTGAGATACATTTTTCCAATCCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS CAA 90 bp | GAGGATTTCTTCTTCTGGCAGCTGGGGATAATTTGTCAGTTTCCTTaGAAATGTGGCTTTGTGCTCACTGGTGAAGGCAGCTGCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: EDFFFWQLGIICQFP*KCGFVLTGEGSCQI Trigger: AATTTGGCAGCTGCCTTCACCAGTGAGCACAAAGCCACATTTCAAAGGAAACTGACAAATTATCCCCAGCTGCCAGAAGAAGAAATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS CAA 90 bp | GAGGATTTCTTCTTCTGGCAGCTGGGGATAATTTGTCAGTTTCCTTaGAAATGTGGCTTTGTGCTCACTGGTGAAGGCAGTTGTGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: EDFFFWQLGIICQFP*KCGFVLTGEGSCAK Trigger: CTTAGCACAACTGCCTTCACCAGTGAGCACAAAGCCACATTTCAAAGGAAACTGACAAATTATCCCCAGCTGCCAGAAGAAGAAATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476971.5 |
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| CDS CAA 72 bp | TTTCTCCTTCAGACTTCGTTGTCAGTCTCGTTTTCTTaGTCCTGTGGAGTAGCGGGGAGATTTGGAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: FLLQTSLSVSFS*SCGVAGRFGVH Trigger: ATGAACTCCAAATCTCCCCGCTACTCCACAGGACAAAGAAAACGAGACTGACAACGAAGTCTGAAGGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476971.5 |
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| CDS CAA 90 bp | GCTGCCAAATTTCCAAAGGGAAGAAGGAACTTGCTGTGTCTGTATTaGCCCCCAGGATTGGAAAAATGTATCTCAGTCACTGGAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: AAKFPKGRRNLLCLY*PPGLEKCISVTGTE Trigger: TTCAGTTCCAGTGACTGAGATACATTTTTCCAATCCTGGGGGCAAATACAGACACAGCAAGTTCCTTCTTCCCTTTGGAAATTTGGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS CAA 90 bp | AAACTAACCTTCTTCTGGCAGCTGGGGATAATTTGTCAGTTTCCTTaGAAATGTGGCTTTGTGCTCACTGGTGAAGGCAGTTGTGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: KLTFFWQLGIICQFP*KCGFVLTGEGSCAK Trigger: CTTAGCACAACTGCCTTCACCAGTGAGCACAAAGCCACATTTCAAAGGAAACTGACAAATTATCCCCAGCTGCCAGAAGAAGGTTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466797.1 |
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| CDS TCA 72 bp | AAAGTTAACCTGTTGGTTATCAGAGAAGGGGGACACTaGACACACAGAAAACTAACCTTCTTCTGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: KVNLLVIREGGH*THRKLTFFWQL Trigger: CAGCTGCCAGAAGAAGGTTAGTTTTCTGTGTGTTCAGTGTCCCCCTTCTCTGATAACCAACAGGTTAACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466797.1 |
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| CDS GCA 72 bp | TTCCAAAGGGAAGAAGGAACTTGCTGTGTCTGTATTTaGCCCCAGGATTGGAAAAATGTATCTCAGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: FQREEGTCCVCI*PQDWKNVSQSL Trigger: CAGTGACTGAGATACATTTTTCCAATCCTGGGGGCAAATACAGACACAGCAAGTTCCTTCTTCCCTTTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000359237.9 |
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| CDS GCA 72 bp | GATCATCAGTCCTATGAACTTAAAAACTTTCATCCCTaGAGCCAATCAGATAATGAACCACAGGAAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: DHQSYELKNFHP*SQSDNEPQETG Trigger: TCCTGTTTCCTGTGGTTCATTATCTGATTGGCTGCAGGGATGAAAGTTTTTAAGTTCATAGGACTGATGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000359237.9 ENST00000473897.1 ENST00000476971.5 |
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