RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLAAT5 (Homo sapiens)

Ensembl gene IDs: ENSG00000168004

Ensembl transcript IDs: ENST00000301790.4, ENST00000394615.2, ENST00000536887.5, ENST00000538712.1, ENST00000539221.5, ENST00000540857.6

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCAACTCAGAACTCCTCACATCCAGCCCCCAGACTACCGCTCATaGGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGA +
Preference number: 1 (lower is better)
Translates to: SQLRTPHIQPPDYRS*AQAKVGVARVWHLG
Trigger: TCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR TCA 90 bp TCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTaGCCTTCCAGGAGCAGCCATGCAGCACATCCTCCAGACGACTGT +
Preference number: 1 (lower is better)
Translates to: SCPPARAGTSHLACY*PSRSSHAAHPPDDC
Trigger: ACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR GCA 90 bp ACCTGCTGGCTCCGGGGTACGCCATATCTGAGGCCATTGACAAAGTaGTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTG +
Preference number: 1 (lower is better)
Translates to: TCWLRGTPYLRPLTK*SQFPSIRLYCTILL
Trigger: CAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR TCA 90 bp CCTTCAGGCAGTTATTGGTTTGGGCTTTATGCTATCCACTACAGCTaGAATAACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTG +
Preference number: 1 (lower is better)
Translates to: PSGSYWFGLYAIHYS*NNCSSSLRSFHQGV
Trigger: CACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR TCA 90 bp TCCTCATCTTCAAAGTGTGGGGTATGCATTCCAGATCTCTCAGCCTaGTGGACAGCTTGGAAGTGGAAGGGACCAATGTCCAGCAAGTGG +
Preference number: 1 (lower is better)
Translates to: SSSSKCGVCIPDLSA*WTAWKWKGPMSSKW
Trigger: CCACTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CCA 90 bp CACACACACACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTaGGGTATGCATTCCAGATCTCTCAGCCTGATGGACAGCTTGGAA +
Preference number: 1 (lower is better)
Translates to: HTHTLRNSPFLIFKV*GMHSRSLSLMDSLE
Trigger: TTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR GCA 90 bp ACTAGGGATATCAGTTTCATCCTGGTCATGATTCACAGAAATGAGTaGAGAGGGAAGACAAAGTCAGATGCCCAGACTGCAGTGTTGGGG +
Preference number: 1 (lower is better)
Translates to: TRDISFILVMIHRNE*RGKTKSDAQTAVLG
Trigger: CCCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTCCCTCTGCACTCATTTCTGTGAATCATGACCAGGATGAAACTGATATCCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR TCA 90 bp CTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCTaGGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTG +
Preference number: 1 (lower is better)
Translates to: LAHKRYTLDTRSFPS*ESVGLCSYILDVFL
Trigger: CAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR GCA 90 bp ACAAAGAGAGTGAAATTAGATCCGTATATGAAATGCCTAGCACAGTaGCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: TKRVKLDPYMKCLAQ*LAHKRYTLDTRSFP
Trigger: TGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTTCATATACGGATCTAATTTCACTCTCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CCA 90 bp AGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCTaGAGTTTTCATCACCTTCAGGCAGTTATTGGTTTGGGCTTTATG +
Preference number: 1 (lower is better)
Translates to: RKHVLFACVSNSSSS*SFHHLQAVIGLGFM
Trigger: CATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000539221.5
3UTR CCA 90 bp GATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTaGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTC +
Preference number: 1 (lower is better)
Translates to: DPSHPESLWVYARIY*MYFWKGNWIHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR CCA 90 bp CCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTaGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACA +
Preference number: 1 (lower is better)
Translates to: PESLWVYARIYWMYF*KGNWIHCRFFQKFT
Trigger: TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR-3UTR TCA 90 bp GCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACGCCACATCTAGCTTGTTATTaGCCTTCCAGGAGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: AFAPSIRACSTCWLRGTPHLACY*PSRSSH
Trigger: ATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATG...TGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR CAA 90 bp GCGTGCTCTACCTGCTGGCTCCGGGGTACGCCATATCTGAGGCCATaGACAAAGTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACG +
Preference number: 2 (lower is better)
Translates to: ACSTCWLRGTPYLRP*TKCSQFPSIRLYCT
Trigger: CGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR-3UTR TCA 90 bp TCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACGCCATATCTGAGGCCACATCTAGCTTGTTATTaGCCTTCCAGGAGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: SIRACSTCWLRGTPYLRPHLACY*PSRSSH
Trigger: ATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATG...TGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR-3UTR CCA 90 bp ATAACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTTGGGGGAGCCAGATaGACCACGCAATCATCTTCT +
Preference number: 2 (lower is better)
Translates to: ITAPAAFAPSIRACSTCWLGGAR*TTQSSS
Trigger: AGAAGATGATTGCGTGGTCCATCTGGCTCCCCCAAG...CCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394615.2
3UTR CAA 90 bp GGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTaGTGTCTTCCTAGCCAACTCAGAACTCCTCACATCCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: GPMSSKWTLPHVHCA*CLPSQLRTPHIQPP
Trigger: TGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR TCA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAAGCTATCCACTACAGCTaGAATAACTGCTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKAIHYS*NNCSSS
Trigger: GCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGC...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
3UTR-3UTR TCA 90 bp AGCCAACTCAGAACTCCTCACATCCAGCCCCCAGACTACCGCTCATGGGCTCAGAGGTACCATGGGCCCTaGATAACGAATCTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: SQLRTPHIQPPDYRSWAQRYHGP*ITNLSF
Trigger: AAAACTGAGATTCGTTATTCAGGGCCCATGGTACCT...CTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR GCA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAAGAAGACAAAGTCAGATaGCCAGACTGCAGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKEDKVR*PDCSVG
Trigger: CCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTC...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CAA 90 bp TGGACAGCTTGGAAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTaGCCCCATGTCCATTGTGCCTTGTGTCTTCCTAGCCAACTCAGA +
Preference number: 2 (lower is better)
Translates to: WTAWKWKGPMSSKWT*PHVHCALCLPSQLR
Trigger: TCTGAGTTGGCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CAA 90 bp AAAGTGTGGGGTATGCATTCCAGATCTCTCAGCCTGATGGACAGCTaGGAAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCA +
Preference number: 2 (lower is better)
Translates to: KVWGMHSRSLSLMDS*EVEGTNVQQVDFAP
Trigger: TGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR TCA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAACCAACAGACCTTATCTaGAACACTCTGAGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKPTDLI*NTLRVP
Trigger: TGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGG...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR TCA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTATTGGGAACTCAACTaGTTCTCAGGCAGGGGAGTG +
Preference number: 2 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCAYWELN*FSGRGV
Trigger: CACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAATA...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR GCA 90 bp ATTGGTTTGGGCTTTATGCTATCCACTACAGCTGAAATAACTGCTCCAGCAGCCTTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGA +
Preference number: 2 (lower is better)
Translates to: IGLGFMLSTTAEITAPAAFQEQP*STSSRR
Trigger: TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAA...GGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR-3UTR GCA 90 bp ATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTTGTGTCTTCCTAGCTCAATCAGGCTGTACTaGACGATCTTGTTGACCATC +
Preference number: 2 (lower is better)
Translates to: MSSKWTLPHVHCALCLPSSIRLY*TILLTI
Trigger: GATGGTCAACAAGATCGTGCAGTACAGCCTGATTGA...GCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
3UTR-3UTR GCA 90 bp ACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTGGGGTATGCATTCCAGACCAGCAAGTGGACTTTaGCCCATGTCCATTGTGCCT +
Preference number: 2 (lower is better)
Translates to: TLRNSPFLIFKVWGMHSRPASGL*PMSIVP
Trigger: AGGCACAATGGACATGGGGCAAAGTCCACTTGCTGG...TCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR GCA 90 bp TTTCATCACCTTCAGGCAGTTATTGGTTTGGGCTTTATGCTATCCACTACAGCTTTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGA +
Preference number: 2 (lower is better)
Translates to: FHHLQAVIGLGFMLSTTAFQEQP*STSSRR
Trigger: TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAA...AGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR-3UTR CCA 90 bp ATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTTGTGTCTTCCTAGCAGGCAGTTATTGGTTTaGGCTTTATGCTATCCACTA +
Preference number: 2 (lower is better)
Translates to: MSSKWTLPHVHCALCLPSRQLLV*ALCYPL
Trigger: TAGTGGATAGCATAAAGCCCAAACCAATAACTGCCT...GCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
3UTR-3UTR TCA 90 bp TTTCAGCTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCTTTTTGTACGCTGGATaGTCTTGTCCACCGGCAAGG +
Preference number: 2 (lower is better)
Translates to: FQLPAITTIPSHNFRSSIFLYAG*SCPPAR
Trigger: CCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAA...GATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536887.5
3UTR-3UTR CCA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTATGCTCGTATATATTaGATGTATTTCTGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCAYARIY*MYFWKG
Trigger: ACCCTTCCAGAAATACATCCAATATATACGAGCATA...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CAA 90 bp TCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTATTGGTTaGGGCTTTATGCTATCCACTACAGCTGAAATAACTGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SSSSWSFHHLQAVIG*GFMLSTTAEITAPA
Trigger: TGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
3UTR-3UTR GCA 90 bp CAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCAACTTAAATGCCTAGCACAGTaGCTGGCGCATAAGAGATAC +
Preference number: 2 (lower is better)
Translates to: QLSLQSPAIISDLPSCQLKCLAQ*LAHKRY
Trigger: GTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTT...AAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CCA 90 bp AGGAGTGGGCATGTGCTTTATTATATCAACAAGACTAAGAAGCCGCACCCGAGTAACATAAGCAAGAGATaGATGAGTCCTCTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: RSGHVLYYINKTKKPHPSNISKR*MSPLCR
Trigger: TCTGCACAGAGGACTCATCCATCTCTTGCTTATGTT...ACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR TCA 90 bp TTCTCCTCTCCACTCCATGAGGAGTGGGCATGTGCTTTATTATATCAACAAGACTTATCTGAAACACTCTaGGGGTTCCATCTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: FSSPLHEEWACALLYQQDLSETL*GFHLAL
Trigger: AAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAA...GTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR TCA 90 bp TTCTCCTCTCCACTCCATGAGGAGTGGGCATGTGCTTTATTATATCAACAAGACGTTTCATCCTGGTCATaGTTCACAGAAATGAGTGCA +
Preference number: 2 (lower is better)
Translates to: FSSPLHEEWACALLYQQDVSSWS*FTEMSA
Trigger: TGCACTCATTTCTGTGAATCATGACCAGGATGAAAC...GTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CCA 90 bp ACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTGGGGTATGCATTCCAGAAGACATCTTCGTTACTaGAAATATTCAAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: TLRNSPFLIFKVWGMHSRRHLRY*KYSSRG
Trigger: ACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCT...TCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CCA 90 bp ATGTGCTTTATTATATCAACAAGACTAAGAAGCCGCACCCGAGTGGTCCCACTCAGACATCTTCGTTACTaGAAATATTCAAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: MCFIISTRLRSRTRVVPLRHLRY*KYSSRG
Trigger: ACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCT...GAGTGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR GCA 90 bp AAACATAAGCAAGAGATGGATGAGTCCTCTGTGCAGAAGTTACTAAACACTCCTGAGTCTGTGGGTCTATaGTCGTATATATTGGATGTA +
Preference number: 2 (lower is better)
Translates to: KHKQEMDESSVQKLLNTPESVGL*SYILDV
Trigger: TACATCCAATATATACGAGCATAGACCCACAGACTC...AGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCTTATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CCA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTC +
Preference number: 2 (lower is better)
Translates to: LPILRVCGSMLVYIGCISFWKGN*IHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAA...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR-3UTR CCA 90 bp CATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTC +
Preference number: 2 (lower is better)
Translates to: HPESLWVYARIYWMYFWKFWKGN*IHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAA...CTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR-3UTR CCA 90 bp AAACATAAGCAAGAGATGGATGAGTCCTCTGTGCAGAAGTTACTAAACACTCCTTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTC +
Preference number: 2 (lower is better)
Translates to: KHKQEMDESSVQKLLNTPFWKGN*IHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAA...AGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCTTATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CCA 72 bp AGAACTCCTCACATCCAGCCCCCAGACTACCGCTCATaGGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGG +
Preference number: 3 (lower is better)
Translates to: RTPHIQPPDYRS*AQAKVGVARVW
Trigger: CCAAACCCTGGCTACTCCCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CAA 90 bp AGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACTTCACCACGGCCCGATaGCTAAAGATGGAAGTAATG +
Preference number: 3 (lower is better)
Translates to: SSLRSFHQGVLYLLAPGYFTTAR*LKMEVM
Trigger: CATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAA...GTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR-3UTR CAA 90 bp AGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACTACGTCCCATCTAGCTaGTTATTGACCTTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: SSLRSFHQGVLYLLAPGYYVPSS*LLTFQE
Trigger: CTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTA...GTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR GCA 72 bp CTCCGGGGTACGCCATATCTGAGGCCATTGACAAAGTaGTCACAGTTCCCTTCAATCAGGCTGTACTGCACG +
Preference number: 3 (lower is better)
Translates to: LRGTPYLRPLTK*SQFPSIRLYCT
Trigger: CGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCTCAGATATGGCGTACCCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR-3UTR CAA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAACCATCTAGCTTGTTATaGACCTTCCAGGAGCAGCCA +
Preference number: 3 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKPSSLL*TFQEQP
Trigger: TGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
3UTR-3UTR CAA 90 bp GTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTGACCATCTTCCTCAAACTCCTCACTaGGGGGAGCCAGATGGACCA +
Preference number: 3 (lower is better)
Translates to: VLTVPFNQAVLHDLVDHLPQTPH*GEPDGP
Trigger: TGGTCCATCTGGCTCCCCCAAGTGAGGAGTTTGAGG...AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394615.2
3UTR-3UTR CAA 90 bp AGGAGTGGGCATGTGCTTTATTATATCAACAAGACTAAGAAGCCGCACCCGAGTGCCCAGACTGCAGTGTaGGGGAACAGGAGGCCATTG +
Preference number: 3 (lower is better)
Translates to: RSGHVLYYINKTKKPHPSAQTAV*GNRRPL
Trigger: CAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGC...ACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR GCA 72 bp CCATCTAGCTTGTTATTGACCTTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGACTGTATTTCACCACG +
Preference number: 3 (lower is better)
Translates to: PSSLLLTFQEQP*STSSRRLYFTT
Trigger: CGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR-3UTR CAA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCCAGGCAGTTATTGGTTaGGGCTTTATGCTATCCACT +
Preference number: 3 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCAQAVIG*GFMLST
Trigger: AGTGGATAGCATAAAGCCCAAACCAATAACTGCCTG...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
3UTR-3UTR CAA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTCTGAGGGTTCCATCTaGCTCTTTTCCACATTCTTC +
Preference number: 3 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCASEGSI*LFSTFF
Trigger: GAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGA...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CAA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAACTATGCTCGTATATATaGGATGTATTTCTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKLCSYI*DVFLEG
Trigger: CCCTTCCAGAAATACATCCAATATATACGAGCATAG...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CCA 72 bp ACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTaGGGTATGCATTCCAGATCTCTCAGCCTGATGGAC +
Preference number: 3 (lower is better)
Translates to: TLRNSPFLIFKV*GMHSRSLSLMD
Trigger: GTCCATCAGGCTGAGAGATCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR TCA 72 bp AGTTATTGGTTTGGGCTTTATGCTATCCACTACAGCTaGAATAACTGCTCCAGCAGCCTTCGCTCCTTCCAT +
Preference number: 3 (lower is better)
Translates to: SYWFGLYAIHYS*NNCSSSLRSFH
Trigger: ATGGAAGGAGCGAAGGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
3UTR CCA 72 bp CATCTTCGTTACTGGAAATATTCAAGCAGAGGTTTCTaGGATGTTTCTGATGGCACTCAAGCATCGGAGACC +
Preference number: 3 (lower is better)
Translates to: HLRYWKYSSRGF*DVSDGTQASET
Trigger: GGTCTCCGATGCTTGAGTGCCATCAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR TCA 72 bp AAGAGATACACACTAGATACCAGATCCTTCCCATCCTaGGAGTCTGTGGGTCTATGCTCGTATATATTGGAT +
Preference number: 3 (lower is better)
Translates to: KRYTLDTRSFPS*ESVGLCSYILD
Trigger: ATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR TCA 72 bp GGAGAAAAGCTTATGGAGATACCAACAGACCTTATCTaGAACACTCTGAGGGTTCCATCTTGCTCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: GEKLMEIPTDLI*NTLRVPSCSFP
Trigger: TGGAAAAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR GCA 72 bp GTGAAATTAGATCCGTATATGAAATGCCTAGCACAGTaGCTGGCGCATAAGAGATACACACTAGATACCAGA +
Preference number: 3 (lower is better)
Translates to: VKLDPYMKCLAQ*LAHKRYTLDTR
Trigger: TCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTTCATATACGGATCTAATTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CAA 90 bp CTTCGTTACTGGAAATATTCAAGCAGAGGTTTCTGGGATGTTTCTGATGGCACTGGAAGCATGTTCTTTTaGCTTGTGTCAGTAACTCTT +
Preference number: 3 (lower is better)
Translates to: LRYWKYSSRGFWDVSDGTGSMFF*LVSVTL
Trigger: AAGAGTTACTGACACAAGCAAAAAGAACATGCTTCC...AGTGCCATCAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR-3UTR CAA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCGGAAGCATGTTCTTTTaGCTTGTGTCAGTAACTCTT +
Preference number: 3 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFGSMFF*LVSVTL
Trigger: AAGAGTTACTGACACAAGCAAAAAGAACATGCTTCC...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR-3UTR CAA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTGGAAGCATGTTCTTTTaGCTTGTGTCAGTAACTCTT +
Preference number: 3 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSGSMFF*LVSVTL
Trigger: AAGAGTTACTGACACAAGCAAAAAGAACATGCTTCC...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR CCA 72 bp GCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTCCAGAAGTTCACAATT +
Preference number: 3 (lower is better)
Translates to: ARIYWMYFWKGN*IHCRFFQKFTI
Trigger: AATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACGCCATATCTGAGGCCACGGAGGCTGCTTGGCTaGGAGCTGGACCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: SIRACSTCWLRGTPYLRPRRLLG*ELDQRC
Trigger: GCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCG...TGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR GCA 90 bp ATAACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCCTTCCATCAGGGCGTaGTCTACCTGCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ITAPAAFAPSIRACSTCWPSIRA*STCWLR
Trigger: CCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGG...CCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CCA 90 bp GCACAGTGCCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCGGAGCCGCGGAAGCTTaGGCACTGGGGGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AQCLAHKRYTLDTRSFPSGAAEA*ALGAAR
Trigger: CCGAGCCGCCCCCAGTGCCCAAGCTTCCGCGGCTCC...GGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACGCCACTTGGGGGAGCCAGATaGACCACGCAATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AFAPSIRACSTCWLRGTPLGGAR*TTQSSS
Trigger: AGAAGATGATTGCGTGGTCCATCTGGCTCCCCCAAG...TGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS-3UTR GCA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAAAGGGCGTGCTCTACCTaGTGGCTCCGGGGTACGCCA +
Preference number: 4 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKRACST*WLRGTP
Trigger: TGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCT...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATAACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGGCGTGCTCTACCTGCTaGCTCCGGGGTACGCCATAT +
Preference number: 4 (lower is better)
Translates to: ITAPAAFAPSIRACSTCWACSTC*LRGTPY
Trigger: ATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGC...CCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR TCA 90 bp GAACTCCTCACATCCAGCCCCCAGACTACCGCTCATGGGCTCAGGCAAAGGTGGCTCCTCTCCACTCCATaGGGAGTGGGCATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: ELLTSSPQTTAHGLRQRWLLSTP*GVGMCF
Trigger: AAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAG...CCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GAACTCCTCACATCCAGCCCCCAGACTACCGCTCATGGGCTCAGGCAAAGGTGGTTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGA +
Preference number: 4 (lower is better)
Translates to: ELLTSSPQTTAHGLRQRWFQEQP*STSSRR
Trigger: TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAA...CCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GAACTCCTCACATCCAGCCCCCAGACTACCGCTCATGGGCTCAGGCAAAGGTGGGTCAGATGCCCAGACTaGAGTGTTGGGGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: ELLTSSPQTTAHGLRQRWVRCPD*SVGEQE
Trigger: CTCCTGTTCCCCAACACTGCAGTCTGGGCATCTGAC...CCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGATCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTGACCCTGAGCGCAGGCGGCTaGTCCTTGGGCCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: MILSTGKGRYVPSSLLLTLSAGG*SLGPVL
Trigger: CAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAG...GGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS-3UTR CCA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCCGGAGGCTGCTTGGCTaGGAGCTGGACCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCARRLLG*ELDQRC
Trigger: GCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCG...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CGACTGTATTTCACCACGGCCCGATTGCTAAAGATGGAAGTAATGCTGCCCACCAGGGCGTGCTCTACCTaGTGGCTCCGGGGTACGCCA +
Preference number: 4 (lower is better)
Translates to: RLYFTTARLLKMEVMLPTRACST*WLRGTP
Trigger: TGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCT...GGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR GCA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCCCTTCCATCAGGGCGTaGTCTACCTGCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCAPSIRA*STCWLR
Trigger: CCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGG...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCGTGCCCGGCGGAGGCTaGTTGGCTGGGAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSVPGGG*LAGSWT
Trigger: GGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGGGCAC...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp AACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTCATCTAGCTTGTTATTaGCCTTCCAGGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: NCSSSLRSFHQGVLYLLAHLACY*PSRSSH
Trigger: ATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATG...AGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR GCA 90 bp TCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACGCCATATCTGAGGCCATCAATCAGGCTGTACTaGACGATCTTGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: SIRACSTCWLRGTPYLRPSIRLY*TILLTI
Trigger: GATGGTCAACAAGATCGTGCAGTACAGCCTGATTGA...TGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR GCA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTACCTTCCATCAGGGCGTaGTCTACCTGCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HTRYQILPILRVCGSMLVPSIRA*STCWLR
Trigger: CCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGG...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCAGGGGACTACGCCCCTaGCGAGTTCCCAGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSRGLRP*RVPSRR
Trigger: GCGCCGACTGGGAACTCGCCAGGGGCGTAGTCCCCT...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATTGGTTTGGGCTTTATGCTATCCACTACAGCTGAAATAACTGCTCCAGCAGCCCCTTGGGCCCGGTACTaGCGGTTCGCGAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: IGLGFMLSTTAEITAPAAPWARY*RFARRV
Trigger: AACCCGCCTCGCGAACCGCCAGTACCGGGCCCAAGG...GGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS-3UTR CCA 90 bp ATTGGTTTGGGCTTTATGCTATCCACTACAGCTGAAATAACTGCTCCAGCAGCCCAGGCGGCTGGTCCTTaGGCCCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: IGLGFMLSTTAEITAPAAQAAGP*ARYWRF
Trigger: GAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTG...GGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS-3UTR CCA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCCTGAGCGCAGGCGGCTaGTCCTTGGGCCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSLSAGG*SLGPVL
Trigger: CAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAG...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GCACAGTGCCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: AQCLAHKRYTLDTRSFPSCLAGS*TNAANP
Trigger: GGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCA...GGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
3UTR CAA 72 bp TTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTaGTTATTGACCTTCCAGGAGCAGCCATGCAGCACA +
Preference number: 4 (lower is better)
Translates to: LSTGKGRYVPSS*LLTFQEQPCST
Trigger: TGTGCTGCATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR TCA 90 bp CTTCCAGGAGCAGCCATGCAGCACATCCTCCAGACGACTGTATTTCACCACGGCGCTATCCACTACAGCTaGAATAACTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPGAAMQHILQTTVFHHGAIHYS*NNCSSS
Trigger: GCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGC...GCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR GCA 90 bp AACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTAGGCCATTGACAAAGTaGTCACAGTTCCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: NCSSSLRSFHQGVLYLLARPLTK*SQFPSI
Trigger: GATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCT...AGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CCA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTCGGAAGCTTGGGCACTaGGGGCGGCTCGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSRKLGH*GRLGEE
Trigger: TTCCTCCCCGAGCCGCCCCCAGTGCCCAAGCTTCCG...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTATTGCTGAGCGCAGGCGGCTaGTCCTTGGGCCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: VSVTLPLAGVFITFRQLLLSAGG*SLGPVL
Trigger: CAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAG...CAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539221.5
CDS-3UTR CCA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCCGGCGGAGGCTGCTTaGCTGGGAGCTGGACCAACG +
Preference number: 4 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPPAEAA*LGAGPT
Trigger: CGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGG...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GCACAGTGCCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCTTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGA +
Preference number: 4 (lower is better)
Translates to: AQCLAHKRYTLDTRSFPSFQEQP*STSSRR
Trigger: TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAA...GGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCAAGGGCGTGCTCTACCTaGTGGCTCCGGGGTACGCCA +
Preference number: 4 (lower is better)
Translates to: LPAITTIPSHNFRSSILSRACST*WLRGTP
Trigger: TGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCT...TGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGTTCGCGAGGCGGGTTTaGGGAGGGGTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: SHPESLWVYARIYWMYFWFARRV*GGVGES
Trigger: GGATTCCCCCACCCCTCCCCAAACCCGCCTCGCGAA...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTACAGGCGGCTGGTCCTTaGGCCCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLQAAGP*ARYWRF
Trigger: GAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTG...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTGACCATCTTTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: VLTVPFNQAVLHDLVDHLCLAGS*TNAANP
Trigger: GGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCA...AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTCGGAGGCTGCTTGGCTaGGAGCTGGACCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSRRLLG*ELDQRC
Trigger: GCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCG...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTACCGGCGGAGGCTGCTTaGCTGGGAGCTGGACCAACG +
Preference number: 4 (lower is better)
Translates to: LRVCGSMLVYIGCISGRVPAEAA*LGAGPT
Trigger: CGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGG...TACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GCACAGTGCCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCCTCCAGTCTGCTTTCTaGCTGGGTGTGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AQCLAHKRYTLDTRSFPSLQSAF*LGVVSK
Trigger: CTTGGAGACCACACCCAGCCAGAAAGCAGACTGGAG...GGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGATCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTGACCTCCAGGTCTGGGTCTTaGTTTTCCCTGAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: MILSTGKGRYVPSSLLLTSRSGS*FSLSGA
Trigger: TGCCCCACTCAGGGAAAACCAAGACCCAGACCTGGA...GGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS-3UTR CCA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAACCAATGTCCAGCAAGTaGACTTTGCCCCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKPMSSK*TLPHVH
Trigger: ATGGACATGGGGCAAAGTCCACTTGCTGGACATTGG...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CAA 72 bp TGGAAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTaGCCCCATGTCCATTGTGCCTTGTGTCTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: WKWKGPMSSKWT*PHVHCALCLPS
Trigger: GCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CAA 72 bp GGTATGCATTCCAGATCTCTCAGCCTGATGGACAGCTaGGAAGTGGAAGGGACCAATGTCCAGCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GMHSRSLSLMDS*EVEGTNVQQVD
Trigger: GTCCACTTGCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCATCAGGCTGAGAGATCTGGAATGCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp ACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTGGGGTATGCATTCCAGATGCCCTGTTCTAATGTaGCCGGCGGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TLRNSPFLIFKVWGMHSRCPVLM*PAEAAW
Trigger: CCAAGCAGCCTCCGCCGGGCACATTAGAACAGGGCA...TCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp AACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTTTGGTTTGGGCTTTATaGTATCCACTACAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NCSSSLRSFHQGVLYLLALVWAL*YPLQLK
Trigger: TTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAA...AGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR GCA 90 bp ATGATCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTGACCCCAGCAAGTGGACTTTaGCCCATGTCCATTGTGCCT +
Preference number: 4 (lower is better)
Translates to: MILSTGKGRYVPSSLLLTPASGL*PMSIVP
Trigger: AGGCACAATGGACATGGGGCAAAGTCCACTTGCTGG...GGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR GCA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCCTCACCCTTGCTGGATaGTTCTGCCCTGTTCTAATG +
Preference number: 4 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCALTLAG*FCPVLM
Trigger: CATTAGAACAGGGCAGAAGCATCCAGCAAGGGTGAG...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp GAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATCGGAAGCTTGGGCACTaGGGGCGGCTCGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ESLWVYARIYWMYFWKGNRKLGH*GRLGEE
Trigger: TTCCTCCCCGAGCCGCCCCCAGTGCCCAAGCTTCCG...ATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp AAACATAAGCAAGAGATGGATGAGTCCTCTGTGCAGAAGTTACTAAACACTCCTAGGGGACTACGCCCCTaGCGAGTTCCCAGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: KHKQEMDESSVQKLLNTPRGLRP*RVPSRR
Trigger: GCGCCGACTGGGAACTCGCCAGGGGCGTAGTCCCCT...AGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCTTATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR CCA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTTCGCGAGGCGGGTTTaGGGAGGGGTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: ILPILRVCGSMLVYIGCIFARRV*GGVGES
Trigger: GGATTCCCCCACCCCTCCCCAAACCCGCCTCGCGAA...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CTGTGGGTCGAAAAGGGCAGGATTATCATAAATGGAAAGAAGCTAGAGACATTTCCTTGGGCCCGGTACTaGCGGTTCGCGAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: LWVEKGRIIINGKKLETFPWARY*RFARRV
Trigger: AACCCGCCTCGCGAACCGCCAGTACCGGGCCCAAGG...AAATGTCTCTAGCTTCTTTCCATTTATGATAATCCTGCCCTTTTCGACCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR CCA 90 bp GAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATCTGAGCGCAGGCGGCTaGTCCTTGGGCCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: ESLWVYARIYWMYFWKGNLSAGG*SLGPVL
Trigger: CAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAG...ATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTAGCCTTCTCCCCTTGCTaGATGCTTCTGCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: HTRYQILPILRVCGSMLVAFSPC*MLLPCS
Trigger: AGAACAGGGCAGAAGCATCCAGCAAGGGGAGAAGGC...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTACTCCAGTCTGCTTTCTaGCTGGGTGTGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HTRYQILPILRVCGSMLVLQSAF*LGVVSK
Trigger: CTTGGAGACCACACCCAGCCAGAAAGCAGACTGGAG...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGGCCCTGAATAACGAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTAGCGTGCTCTACCTGCTaGCTCCGGGGTACGCCATAT +
Preference number: 4 (lower is better)
Translates to: WALNNESQFFLRSSSSELACSTC*LRGTPY
Trigger: ATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGC...TAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CGACTGTATTTCACCACGGCCCGATTGCTAAAGATGGAAGTAATGCTGCCCACCTTGGTTTTCCCTGAGTaGGGCACAGCTGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: RLYFTTARLLKMEVMLPTLVFPE*GTAERL
Trigger: CAGACGTTCAGCTGTGCCCCACTCAGGGAAAACCAA...GGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS-3UTR TCA 90 bp ATGATCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTGACCTTTTTGTACGCTGGATaGTCTTGTCCACCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: MILSTGKGRYVPSSLLLTFLYAG*SCPPAR
Trigger: CCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAA...GGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR TCA 90 bp GCACAGTGCCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCCACACACACACACTTTaGGAAACTCGCCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AQCLAHKRYTLDTRSFPSHTHTL*ETRPSS
Trigger: TGAGGAAGGGCGAGTTTCTCAAAGTGTGTGTGTGTG...GGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGTGCCCTGTTCTAATGTaGCCGGCGGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SHPESLWVYARIYWMYFWCPVLM*PAEAAW
Trigger: CCAAGCAGCCTCCGCCGGGCACATTAGAACAGGGCA...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTACTTGCTGGATGCTTCTaGCCTGTTCTAATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: HTRYQILPILRVCGSMLVLAGCF*PVLMCP
Trigger: CGGGCACATTAGAACAGGGCAGAAGCATCCAGCAAG...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTGACCATCTTTTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGA +
Preference number: 4 (lower is better)
Translates to: VLTVPFNQAVLHDLVDHLFQEQP*STSSRR
Trigger: TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAA...AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCGGAGCCGCGGAAGCTTaGGCACTGGGGGCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFGAAEA*ALGAAR
Trigger: CCGAGCCGCCCCCAGTGCCCAAGCTTCCGCGGCTCC...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPCLAGS*TNAANP
Trigger: GGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCA...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GGTGGTTTCAGCTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: GGFSYQLSLQSPAIISDLCLAGS*TNAANP
Trigger: GGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCA...AAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATCAGGTCTCCAGGTCTaGGTCTTGGTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HTRYQILPILRVCGSMLVSGLQV*VLVFPQ
Trigger: CTGAGGGAAAACCAAGACCCAGACCTGGAGACCTGA...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GGTGGTTTCAGCTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTGCGTGCTCTACCTGCTaGCTCCGGGGTACGCCATAT +
Preference number: 4 (lower is better)
Translates to: GGFSYQLSLQSPAIISDLACSTC*LRGTPY
Trigger: ATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGC...AAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp AACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTAGACATCTTCGTTACTaGAAATATTCAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NCSSSLRSFHQGVLYLLARHLRY*KYSSRG
Trigger: ACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCT...AGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR TCA 90 bp GAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTACACTGTGGGTCGAAAAAGGTCCTCCTCCTCTaGGCTACACTGTGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: ESQFFLRSSSSELHCGSKKVLLL*ATLWVE
Trigger: TTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTT...TTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp ATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTTGTGTCTTCCTAGCCCAACAGACCTTATCTaGAACACTCTGAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: MSSKWTLPHVHCALCLPSPTDLI*NTLRVP
Trigger: TGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGG...GCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GGCTCAGGCAAAGGTGGGAGTAGCCAGGGTTTGGCACTTGGGAGACACTCAAAAGTTTCATCCTGGTCATaGTTCACAGAAATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GSGKGGSSQGLALGRHSKVSSWS*FTEMSA
Trigger: TGCACTCATTTCTGTGAATCATGACCAGGATGAAAC...TTTTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCCACCTTTGCCTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp TGGGCCCTGAATAACGAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTACTCCTCTCCACTCCATaGGGAGTGGGCATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: WALNNESQFFLRSSSSELLLSTP*GVGMCF
Trigger: AAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAG...TAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTATGCCCTGTTCTAATGTaGCCGGCGGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLCPVLM*PAEAAW
Trigger: CCAAGCAGCCTCCGCCGGGCACATTAGAACAGGGCA...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTCGGAAGCTTGGGCACTaGGGGCGGCTCGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSMLVYIGCISGRVIGYIRKLGH*GRLGEE
Trigger: TTCCTCCCCGAGCCGCCCCCAGTGCCCAAGCTTCCG...AATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGGCCCTGAATAACGAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTAGCCTTCTCCCCTTGCTaGATGCTTCTGCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WALNNESQFFLRSSSSELAFSPC*MLLPCS
Trigger: AGAACAGGGCAGAAGCATCCAGCAAGGGGAGAAGGC...TAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR TCA 90 bp GTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTGACCATCTTTTTTTGTACGCTGGATaGTCTTGTCCACCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VLTVPFNQAVLHDLVDHLFLYAG*SCPPAR
Trigger: CCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAA...AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR TCA 90 bp GTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTGACCATCTTGCTATCCACTACAGCTaGAATAACTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLTVPFNQAVLHDLVDHLAIHYS*NNCSSS
Trigger: GCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGC...AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR TCA 90 bp ATGTGCTTTATTATATCAACAAGACTAAGAAGCCGCACCCGAGTGGTCCCACTCAGATCCTTCCCATCCTaGGAGTCTGTGGGTCTATGC +
Preference number: 4 (lower is better)
Translates to: MCFIISTRLRSRTRVVPLRSFPS*ESVGLC
Trigger: GCATAGACCCACAGACTCTCAGGATGGGAAGGATCT...GAGTGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTATTGGAGCTGGACCAACGCTaGGAATCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: VSVTLPLAGVFITFRQLLELDQR*ESHGFF
Trigger: GAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTC...CAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000539221.5
CDS-3UTR GCA 90 bp AGGAGTGGGCATGTGCTTTATTATATCAACAAGACTAAGAAGCCGCACCCGAGTCTTGCTGGATGCTTCTaGCCTGTTCTAATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RSGHVLYYINKTKKPHPSLAGCF*PVLMCP
Trigger: CGGGCACATTAGAACAGGGCAGAAGCATCCAGCAAG...ACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAACAGCCTTCTCCCCTTaGTGGATGCTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PILRVCGSMLVYIGCISGTAFSP*WMLLPC
Trigger: ACAGGGCAGAAGCATCCAGCAAGGGGAGAAGGCTGT...TCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGATTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGA +
Preference number: 4 (lower is better)
Translates to: PILRVCGSMLVYIGCISGFQEQP*STSSRR
Trigger: TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAA...TCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCAGGGCGTGCTCTACCTaGTGGCTCCGGGGTACGCCA +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFRACST*WLRGTP
Trigger: TGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCT...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAAGGGGACTACGCCCCTaGCGAGTTCCCAGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTRGLRP*RVPSRR
Trigger: GCGCCGACTGGGAACTCGCCAGGGGCGTAGTCCCCT...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCCCTTGGGCCCGGTACTaGCGGTTCGCGAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFPWARY*RFARRV
Trigger: AACCCGCCTCGCGAACCGCCAGTACCGGGCCCAAGG...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCCCTTGGGCCCGGTACTaGCGGTTCGCGAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: ARIYWMYFWKGNWIHCRFPWARY*RFARRV
Trigger: AACCCGCCTCGCGAACCGCCAGTACCGGGCCCAAGG...GAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGCAGGCGGCTGGTCCTTaGGCCCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: YWMYFWKGNWIHCRFFQKQAAGP*ARYWRF
Trigger: GAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTG...CTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACACAGGCGGCTGGTCCTTaGGCCCGGTACTGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTQAAGP*ARYWRF
Trigger: GAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTG...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTCGGAGGCTGCTTGGCTaGGAGCTGGACCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: GSMLVYIGCISGRVIGYIRRLLG*ELDQRC
Trigger: GCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCG...AATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGCCGGCGGAGGCTGCTTaGCTGGGAGCTGGACCAACG +
Preference number: 4 (lower is better)
Translates to: YWMYFWKGNWIHCRFFQKPAEAA*LGAGPT
Trigger: CGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGG...CTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCCCGGCGGAGGCTGCTTaGCTGGGAGCTGGACCAACG +
Preference number: 4 (lower is better)
Translates to: ARIYWMYFWKGNWIHCRFPAEAA*LGAGPT
Trigger: CGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGG...GAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp TTGCTTGTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTTTTGTACGCTGGATaGTCTTGTCCACCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLVSVTLPLAGVFITFRQFLYAG*SCPPAR
Trigger: CCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAA...CTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000539221.5
CDS-3UTR TCA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAGATCCTTCCCATCCTaGGAGTCTGTGGGTCTATGC +
Preference number: 4 (lower is better)
Translates to: SHPESLWVYARIYWMYFWRSFPS*ESVGLC
Trigger: GCATAGACCCACAGACTCTCAGGATGGGAAGGATCT...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp CAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCAACTTTCAGGCAGGGGAGTGTaGGAAGAAATGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QLSLQSPAIISDLPSCQLSGRGV*EEMGKR
Trigger: CCTCTTCCCCATTTCTTCTCACACTCCCCTGCCTGA...AAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGACTTGCTGGATGCTTCTaGCCTGTTCTAATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PILRVCGSMLVYIGCISGLAGCF*PVLMCP
Trigger: CGGGCACATTAGAACAGGGCAGAAGCATCCAGCAAG...TCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTACAGCCTTCTCCCCTTaGTGGATGCTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPILRVCGSMLVYIGCISTAFSP*WMLLPC
Trigger: ACAGGGCAGAAGCATCCAGCAAGGGGAGAAGGCTGT...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACATTCGCGAGGCGGGTTTaGGGAGGGGTGGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTFARRV*GGVGES
Trigger: GGATTCCCCCACCCCTCCCCAAACCCGCCTCGCGAA...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GCACAGTGCCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCCATCCTGAGAGTCTGTaGGTCTATGCTCGTATATAT +
Preference number: 4 (lower is better)
Translates to: AQCLAHKRYTLDTRSFPSHPESL*VYARIY
Trigger: ATATATACGAGCATAGACCCACAGACTCTCAGGATG...GGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGACGGATTCTTCTGAGTaGGGCACAGCTGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: SHPESLWVYARIYWMYFWTDSSE*GTAERL
Trigger: CAGACGTTCAGCTGTGCCCCACTCAGAAGAATCCGT...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCCAGACTACCGCTCATaGGCTCAGGCAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VLFACVSNSSSSWSFHHLPDYRS*AQAKVG
Trigger: TCCCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGG...AAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp TTGCTTGTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGCCAATGTCCAGCAAGTaGACTTTGCCCCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLVSVTLPLAGVFITFRQPMSSK*TLPHVH
Trigger: ATGGACATGGGGCAAAGTCCACTTGCTGGACATTGG...CTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp ATGATCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTGACCCCACTCCATGAGGAGTaGGCATGTGCTTTATTATAT +
Preference number: 4 (lower is better)
Translates to: MILSTGKGRYVPSSLLLTPLHEE*ACALLY
Trigger: ATATAATAAAGCACATGCCCACTCCTCATGGAGTGG...GGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp CTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCAACTCCTCACCCTTGCTaGATGCTTCTGCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LPAITTIPSHNFRSSILSTPHPC*MLLPCS
Trigger: AGAACAGGGCAGAAGCATCCAGCAAGGGTGAGGAGT...TGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR TCA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGTATTGGGAACTCAACTaGTTCTCAGGCAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SHPESLWVYARIYWMYFWYWELN*FSGRGV
Trigger: CACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAATA...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTATTGCACACACACACACTTTaGGAAACTCGCCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSVTLPLAGVFITFRQLLHTHTL*ETRPSS
Trigger: TGAGGAAGGGCGAGTTTCTCAAAGTGTGTGTGTGTG...CAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR GCA 90 bp GAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATGAGCTGGACCAACGCTaGGAATCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: ESLWVYARIYWMYFWKGNELDQR*ESHGFF
Trigger: GAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTC...ATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCTGCCCTGTTCTAATGTaGCCGGCGGAGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFCPVLM*PAEAAW
Trigger: CCAAGCAGCCTCCGCCGGGCACATTAGAACAGGGCA...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCATCTCCCCTTGCTGGATaGTTCTGCCCTGTTCTAATG +
Preference number: 4 (lower is better)
Translates to: LPAITTIPSHNFRSSILSSPLAG*FCPVLM
Trigger: CATTAGAACAGGGCAGAAGCATCCAGCAAGGGGAGA...TGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR GCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACACCTTCCATCAGGGCGTaGTCTACCTGCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTPSIRA*STCWLR
Trigger: CCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGG...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp ATTGGTTTGGGCTTTATGCTATCCACTACAGCTGAAATAACTGCTCCAGCAGCCAAATGCCTAGCACAGTaGCTGGCGCATAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: IGLGFMLSTTAEITAPAAKCLAQ*LAHKRY
Trigger: GTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTT...GGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR GCA 90 bp AAACATAAGCAAGAGATGGATGAGTCCTCTGTGCAGAAGTTACTAAACACTCCTGTCAGATGCCCAGACTaGAGTGTTGGGGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: KHKQEMDESSVQKLLNTPVRCPD*SVGEQE
Trigger: CTCCTGTTCCCCAACACTGCAGTCTGGGCATCTGAC...AGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCTTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp AGGAGTGGGCATGTGCTTTATTATATCAACAAGACTAAGAAGCCGCACCCGAGTCTGGTACTCAGGTTCTaGTTCCAAGGAAGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: RSGHVLYYINKTKKPHPSLVLRF*FQGSLN
Trigger: GTTGAGACTTCCTTGGAAGCAGAACCTGAGTACCAG...ACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACATGCCCACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCAGGTCTCCAGGTCTaGGTCTTGGTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILPILRVCGSMLVYIGCISGLQV*VLVFPQ
Trigger: CTGAGGGAAAACCAAGACCCAGACCTGGAGACCTGA...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTACTTGGGGGAGCCAGATaGACCACGCAATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLLGGAR*TTQSSS
Trigger: AGAAGATGATTGCGTGGTCCATCTGGCTCCCCCAAG...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTCTTGGGGGAGCCAGATaGACCACGCAATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ILPILRVCGSMLVYIGCILGGAR*TTQSSS
Trigger: AGAAGATGATTGCGTGGTCCATCTGGCTCCCCCAAG...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGATCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTGACCAGGCAGTTATTGGTTTaGGCTTTATGCTATCCACTA +
Preference number: 4 (lower is better)
Translates to: MILSTGKGRYVPSSLLLTRQLLV*ALCYPL
Trigger: TAGTGGATAGCATAAAGCCCAAACCAATAACTGCCT...GGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CCA 90 bp CTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAGGAGTAGCCAGGGTTTaGCACTTGGGAGACACTCAA +
Preference number: 4 (lower is better)
Translates to: LRVCGSMLVYIGCISGRVGVARV*HLGDTQ
Trigger: TTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCC...TACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTTGGACAGCTTGGAAGTaGAAGGGACCAATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LPILRVCGSMLVYIGCISWTAWK*KGPMSS
Trigger: GCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCA...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTCTCAGGCTTTGGAATTaGACTCCAGTCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSLRLWN*TPVCFL
Trigger: CAGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAG...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GGTGGTTTCAGCTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCTCAGGCTTTGGAATTaGACTCCAGTCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GGFSYQLSLQSPAIISDLLRLWN*TPVCFL
Trigger: CAGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAG...AAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR TCA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTCATCTAGCTTGTTATTaGCCTTCCAGGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSHLACY*PSRSSH
Trigger: ATGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATG...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCCAACAGACCTTATCTaGAACACTCTGAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPPTDLI*NTLRVP
Trigger: TGGAACCCTCAGAGTGTTTCAGATAAGGTCTGTTGG...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTATCTCCCCTTGCTGGATaGTTCTGCCCTGTTCTAATG +
Preference number: 4 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLSPLAG*FCPVLM
Trigger: CATTAGAACAGGGCAGAAGCATCCAGCAAGGGGAGA...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTCCCCTTGCTGGATaGTTCTGCCCTGTTCTAATG +
Preference number: 4 (lower is better)
Translates to: ILPILRVCGSMLVYIGCISPLAG*FCPVLM
Trigger: CATTAGAACAGGGCAGAAGCATCCAGCAAGGGGAGA...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp ACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTGGGGTATGCATTCCAGAAGGCCATTGACAAAGTaGTCACAGTTCCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: TLRNSPFLIFKVWGMHSRRPLTK*SQFPSI
Trigger: GATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCT...TCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTAGAGTCTGTGGGTCTATaGTCGTATATATTGGATGTA +
Preference number: 4 (lower is better)
Translates to: HTRYQILPILRVCGSMLVESVGL*SYILDV
Trigger: TACATCCAATATATACGAGCATAGACCCACAGACTC...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TTTCAGCTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCGAAGACAAAGTCAGATaGCCAGACTGCAGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FQLPAITTIPSHNFRSSIEDKVR*PDCSVG
Trigger: CCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTC...GATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAGCGTGCTCTACCTGCTaGCTCCGGGGTACGCCATAT +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTACSTC*LRGTPY
Trigger: ATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGC...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTGACCATCTTCCTTCAGGCAGTTATTaGTTTGGGCTTTATGCTATC +
Preference number: 4 (lower is better)
Translates to: VLTVPFNQAVLHDLVDHLPSGSY*FGLYAI
Trigger: GATAGCATAAAGCCCAAACCAATAACTGCCTGAAGG...AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR TCA 90 bp AAACATAAGCAAGAGATGGATGAGTCCTCTGTGCAGAAGTTACTAAACACTCCTTTTTTGTACGCTGGATaGTCTTGTCCACCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: KHKQEMDESSVQKLLNTPFLYAG*SCPPAR
Trigger: CCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAA...AGGAGTGTTTAGTAACTTCTGCACAGAGGACTCATCCATCTCTTGCTTATGTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTAAGGTCCTCCTCCTCTaGGCTACACTGTGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: GSMLVYIGCISGRVIGYIKVLLL*ATLWVE
Trigger: TTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTT...AATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCTTATCTGAAACACTCTaGGGGTTCCATCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSLSETL*GFHLAL
Trigger: AAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAA...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATATTGGGAACTCAACTaGTTCTCAGGCAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VCGSMLVYIGCISGRVIGYWELN*FSGRGV
Trigger: CACTCCCCTGCCTGAGAATCAGTTGAGTTCCCAATA...TCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTAATAATGAATAGAGACTaGAGGAAGAGGTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: HTRYQILPILRVCGSMLVIMNRD*RKRYWE
Trigger: TTCCCAATACCTCTTCCTTCAGTCTCTATTCATTAT...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCGAGCTGGACCAACGCTaGGAATCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFELDQR*ESHGFF
Trigger: GAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTC...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAGCCTTCTCCCCTTaGTGGATGCTTCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFTAFSP*WMLLPC
Trigger: ACAGGGCAGAAGCATCCAGCAAGGGGAGAAGGCTGT...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCTTCCAGGAGCAGCCATaGAGCACATCCTCCAGACGA +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFFQEQP*STSSRR
Trigger: TCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAA...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTTCAATCAGGCTGTACTaGACGATCTTGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPSIRLY*TILLTI
Trigger: GATGGTCAACAAGATCGTGCAGTACAGCCTGATTGA...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTAGGCCATTGACAAAGTaGTCACAGTTCCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPRPLTK*SQFPSI
Trigger: GATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCT...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CCAAATAGGAGAAAAGCTTATGGAGATACCAACAGACCTTATCTGAAACACTCTCTTGGGGGAGCCAGATaGACCACGCAATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: PNRRKAYGDTNRPYLKHSLGGAR*TTQSSS
Trigger: AGAAGATGATTGCGTGGTCCATCTGGCTCCCCCAAG...AGAGTGTTTCAGATAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR CCA 90 bp GTGCTCACAGTTCCCTTCAATCAGGCTGTACTGCACGATCTTGTTGACCATCTTAGGCAGTTATTGGTTTaGGCTTTATGCTATCCACTA +
Preference number: 4 (lower is better)
Translates to: VLTVPFNQAVLHDLVDHLRQLLV*ALCYPL
Trigger: TAGTGGATAGCATAAAGCCCAAACCAATAACTGCCT...AAGATGGTCAACAAGATCGTGCAGTACAGCCTGATTGAAGGGAACTGTGAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CCA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCCCTTCAGGCAGTTATTaGTTTGGGCTTTATGCTATC +
Preference number: 4 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSPSGSY*FGLYAI
Trigger: GATAGCATAAAGCCCAAACCAATAACTGCCTGAAGG...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CGACTGTATTTCACCACGGCCCGATTGCTAAAGATGGAAGTAATGCTGCCCACCTATGCTCGTATATATTaGATGTATTTCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RLYFTTARLLKMEVMLPTYARIY*MYFWKG
Trigger: ACCCTTCCAGAAATACATCCAATATATACGAGCATA...GGTGGGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp ATGTGCTTTATTATATCAACAAGACTAAGAAGCCGCACCCGAGTGGTCCCACTCAACATAAGCAAGAGATaGATGAGTCCTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: MCFIISTRLRSRTRVVPLNISKR*MSPLCR
Trigger: TCTGCACAGAGGACTCATCCATCTCTTGCTTATGTT...GAGTGGGACCACTCGGGTGCGGCTTCTTAGTCTTGTTGATATAATAAAGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGGAGTCTCTGTCCCATTaGGTTCAAGCCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: SHPESLWVYARIYWMYFWESLSH*VQASKK
Trigger: CTTTTTACTGGCTTGAACCCAATGGGACAGAGACTC...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTGGGGTATGCATTCCAGACCAGGGTTTGGCACTTaGGAGACACTCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: TLRNSPFLIFKVWGMHSRPGFGT*ETLKNI
Trigger: AATATTTTTGAGTGTCTCCCAAGTGCCAAACCCTGG...TCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCCAGACTACCGCTCATaGGCTCAGGCAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSPDYRS*AQAKVG
Trigger: TCCCACCTTTGCCTGAGCCCATGAGCGGTAGTCTGG...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
3UTR CAA 72 bp CCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTATaGGTTTGGGCTTTATGCTATCCACTACAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PLAGVFITFRQL*VWALCYPLQLK
Trigger: TTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR TCA 90 bp GAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATCTCAGGCTTTGGAATTaGACTCCAGTCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ESLWVYARIYWMYFWKGNLRLWN*TPVCFL
Trigger: CAGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAG...ATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp TGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATAGATCCTTCCCATCCTaGGAGTCTGTGGGTCTATGC +
Preference number: 4 (lower is better)
Translates to: WVYARIYWMYFWKGNWIHRSFPS*ESVGLC
Trigger: GCATAGACCCACAGACTCTCAGGATGGGAAGGATCT...ATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp CATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGAGGTACCATGGGCCCTaGATAACGAATCTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HPESLWVYARIYWMYFWKRYHGP*ITNLSF
Trigger: AAAACTGAGATTCGTTATTCAGGGCCCATGGTACCT...CTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCAGGCAGGGGAGTGTaGGAAGAAATGGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFSGRGV*EEMGKR
Trigger: CCTCTTCCCCATTTCTTCTCACACTCCCCTGCCTGA...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAGAGCTGGACCAACGCTaGGAATCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTELDQR*ESHGFF
Trigger: GAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTC...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAAGGCCATTGACAAAGTaGTCACAGTTCCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: LRVCGSMLVYIGCISGRVRPLTK*SQFPSI
Trigger: GATTGAAGGGAACTGTGAGCACTTTGTCAATGGCCT...TACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTACACTGTGGGTCGAAATTGGTTTGGGCTTTATaGTATCCACTACAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: ESQFFLRSSSSELHCGSKLVWAL*YPLQLK
Trigger: TTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAA...TTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TTGCTTGTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTGGTTTGGGCTTTATaGTATCCACTACAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LLVSVTLPLAGVFITFRQLVWAL*YPLQLK
Trigger: TTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAA...CTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000539221.5
CDS-3UTR GCA 90 bp ATTGGTTTGGGCTTTATGCTATCCACTACAGCTGAAATAACTGCTCCAGCAGCCGAGTCTGTGGGTCTATaGTCGTATATATTGGATGTA +
Preference number: 4 (lower is better)
Translates to: IGLGFMLSTTAEITAPAAESVGL*SYILDV
Trigger: TACATCCAATATATACGAGCATAGACCCACAGACTC...GGCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTGCCTTCTCCCCTTGCTaGATGCTTCTGCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSAFSPC*MLLPCS
Trigger: AGAACAGGGCAGAAGCATCCAGCAAGGGGAGAAGGC...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACACTCCAGTCTGCTTTCTaGCTGGGTGTGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTLQSAF*LGVVSK
Trigger: CTTGGAGACCACACCCAGCCAGAAAGCAGACTGGAG...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGACCTTCAGGCAGTTATTaGTTTGGGCTTTATGCTATC +
Preference number: 4 (lower is better)
Translates to: PILRVCGSMLVYIGCISGPSGSY*FGLYAI
Trigger: GATAGCATAAAGCCCAAACCAATAACTGCCTGAAGG...TCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTAACTCTTCCTCTAGCTaGAGTTTTCATCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPNSSSS*SFHHLQ
Trigger: CTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTT...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACGGATTCTTCTGAGTaGGGCACAGCTGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFTDSSE*GTAERL
Trigger: CAGACGTTCAGCTGTGCCCCACTCAGAAGAATCCGT...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAACATAAGCAAGAGATaGATGAGTCCTCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSNISKR*MSPLCR
Trigger: TCTGCACAGAGGACTCATCCATCTCTTGCTTATGTT...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCTGGACAGCTTGGAAGTaGAAGGGACCAATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFWTAWK*KGPMSS
Trigger: GCTGGACATTGGTCCCTTCCACTTCCAAGCTGTCCA...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGACCACTCCATGAGGAGTaGGCATGTGCTTTATTATAT +
Preference number: 4 (lower is better)
Translates to: PILRVCGSMLVYIGCISGPLHEE*ACALLY
Trigger: ATATAATAAAGCACATGCCCACTCCTCATGGAGTGG...TCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGAAGGTACCATGGGCCCTaGATAACGAATCTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VCGSMLVYIGCISGRVIGRYHGP*ITNLSF
Trigger: AAAACTGAGATTCGTTATTCAGGGCCCATGGTACCT...TCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCCTTGCTGGATGCTTCTaGCCTGTTCTAATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFLAGCF*PVLMCP
Trigger: CGGGCACATTAGAACAGGGCAGAAGCATCCAGCAAG...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGTTGGTTTGGGCTTTATaGTATCCACTACAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SHPESLWVYARIYWMYFWLVWAL*YPLQLK
Trigger: TTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAA...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAGAGTCTGTGGGTCTATaGTCGTATATATTGGATGTA +
Preference number: 4 (lower is better)
Translates to: PILRVCGSMLVYIGCISGESVGL*SYILDV
Trigger: TACATCCAATATATACGAGCATAGACCCACAGACTC...TCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp GCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCCCAGCAAGTGGACTTTaGCCCATGTCCATTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ARIYWMYFWKGNWIHCRFPASGL*PMSIVP
Trigger: AGGCACAATGGACATGGGGCAAAGTCCACTTGCTGG...GAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCAGGTCTCCAGGTCTaGGTCTTGGTTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFSGLQV*VLVFPQ
Trigger: CTGAGGGAAAACCAAGACCCAGACCTGGAGACCTGA...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TTCTCCTCTCCACTCCATGAGGAGTGGGCATGTGCTTTATTATATCAACAAGACAGGCAGTTATTGGTTTaGGCTTTATGCTATCCACTA +
Preference number: 4 (lower is better)
Translates to: FSSPLHEEWACALLYQQDRQLLV*ALCYPL
Trigger: TAGTGGATAGCATAAAGCCCAAACCAATAACTGCCT...GTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTCATCCTGAGAGTCTGTaGGTCTATGCTCGTATATAT +
Preference number: 4 (lower is better)
Translates to: ILPILRVCGSMLVYIGCIHPESL*VYARIY
Trigger: ATATATACGAGCATAGACCCACAGACTCTCAGGATG...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGGCCCTGAATAACGAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTAAGACATCTTCGTTACTaGAAATATTCAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: WALNNESQFFLRSSSSELRHLRY*KYSSRG
Trigger: ACCTCTGCTTGAATATTTCCAGTAACGAAGATGTCT...TAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTCCAGGGTTTGGCACTTaGGAGACACTCAAAAATATT +
Preference number: 4 (lower is better)
Translates to: LPILRVCGSMLVYIGCISPGFGT*ETLKNI
Trigger: AATATTTTTGAGTGTCTCCCAAGTGCCAAACCCTGG...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTGGAGTAGCCAGGGTTTaGCACTTGGGAGACACTCAA +
Preference number: 4 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSGVARV*HLGDTQ
Trigger: TTGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCC...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCAACTTCTCATCTTCAAAGTGTaGGGTATGCATTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: QLSLQSPAIISDLPSCQLLIFKV*GMHSRS
Trigger: AGATCTGGAATGCATACCCCACACTTTGAAGATGAG...AAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACATTTTTGTACGCTGGATaGTCTTGTCCACCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTFLYAG*SCPPAR
Trigger: CCTTGCCGGTGGACAAGATCATCCAGCGTACAAAAA...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAGCTATCCACTACAGCTaGAATAACTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTAIHYS*NNCSSS
Trigger: GCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGC...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTGCTATCCACTACAGCTaGAATAACTGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSAIHYS*NNCSSS
Trigger: GCTGCTGGAGCAGTTATTTCAGCTGTAGTGGATAGC...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp GTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGAGTTTCATCCTGGTCATaGTTCACAGAAATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VCGSMLVYIGCISGRVIGVSSWS*FTEMSA
Trigger: TGCACTCATTTCTGTGAATCATGACCAGGATGAAAC...TCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTTTTCCCTCAGCTGCTTaGTTTATTAACTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPILRVCGSMLVYIGCISFPSAA*FINLPS
Trigger: TGAAGGCAAGTTAATAAAGCAAGCAGCTGAGGGAAA...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp CCAAATAGGAGAAAAGCTTATGGAGATACCAACAGACCTTATCTGAAACACTCTTCAATCAGGCTGTACTaGACGATCTTGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: PNRRKAYGDTNRPYLKHSSIRLY*TILLTI
Trigger: GATGGTCAACAAGATCGTGCAGTACAGCCTGATTGA...AGAGTGTTTCAGATAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATAAATGCCTAGCACAGTaGCTGGCGCATAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: WVYARIYWMYFWKGNWIHKCLAQ*LAHKRY
Trigger: GTATCTCTTATGCGCCAGGCACTGTGCTAGGCATTT...ATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAGAAGACAAAGTCAGATaGCCAGACTGCAGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTEDKVR*PDCSVG
Trigger: CCCAACACTGCAGTCTGGGCATCTGACTTTGTCTTC...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGCTATTTAGACCTGAGTaGGGCACAGCTGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: YWMYFWKGNWIHCRFFQKLFRPE*GTAERL
Trigger: CAGACGTTCAGCTGTGCCCCACTCAGGTCTAAATAG...CTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301790.4
ENST00000539221.5
CDS-3UTR CCA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCTATTTAGACCTGAGTaGGGCACAGCTGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSLFRPE*GTAERL
Trigger: CAGACGTTCAGCTGTGCCCCACTCAGGTCTAAATAG...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301790.4
ENST00000539221.5
CDS-3UTR GCA 90 bp GTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATTTCCCTCAGCTGCTTaGTTTATTAACTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VCGSMLVYIGCISGRVIGFPSAA*FINLPS
Trigger: TGAAGGCAAGTTAATAAAGCAAGCAGCTGAGGGAAA...TCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCTGGTACTCAGGTTCTaGTTCCAAGGAAGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSLVLRF*FQGSLN
Trigger: GTTGAGACTTCCTTGGAAGCAGAACCTGAGTACCAG...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CCAAATAGGAGAAAAGCTTATGGAGATACCAACAGACCTTATCTGAAACACTCTCCTTCAGGCAGTTATTaGTTTGGGCTTTATGCTATC +
Preference number: 4 (lower is better)
Translates to: PNRRKAYGDTNRPYLKHSPSGSY*FGLYAI
Trigger: GATAGCATAAAGCCCAAACCAATAACTGCCTGAAGG...AGAGTGTTTCAGATAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTTATGCTCGTATATATTaGATGTATTTCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSYARIY*MYFWKG
Trigger: ACCCTTCCAGAAATACATCCAATATATACGAGCATA...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CCAAATAGGAGAAAAGCTTATGGAGATACCAACAGACCTTATCTGAAACACTCTCTCATCTTCAAAGTGTaGGGTATGCATTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: PNRRKAYGDTNRPYLKHSLIFKV*GMHSRS
Trigger: AGATCTGGAATGCATACCCCACACTTTGAAGATGAG...AGAGTGTTTCAGATAAGGTCTGTTGGTATCTCCATAAGCTTTTCTCCTATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR TCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCTTATCTGAAACACTCTaGGGGTTCCATCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFLSETL*GFHLAL
Trigger: AAGAGCAAGATGGAACCCTCAGAGTGTTTCAGATAA...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTCAATCAGGCTGTACTaGACGATCTTGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: YWMYFWKGNWIHCRFFQKSIRLY*TILLTI
Trigger: GATGGTCAACAAGATCGTGCAGTACAGCCTGATTGA...CTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATCCTTCAGGCAGTTATTaGTTTGGGCTTTATGCTATC +
Preference number: 4 (lower is better)
Translates to: WVYARIYWMYFWKGNWIHPSGSY*FGLYAI
Trigger: GATAGCATAAAGCCCAAACCAATAACTGCCTGAAGG...ATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCAACTCTTCCTCTAGCTaGAGTTTTCATCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFNSSSS*SFHHLQ
Trigger: CTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTT...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTAACTCTTCCTCTAGCTaGAGTTTTCATCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSMLVYIGCISGRVIGYINSSSS*SFHHLQ
Trigger: CTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTT...AATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TTTCATCACCTTCAGGCAGTTATTGGTTTGGGCTTTATGCTATCCACTACAGCTTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: FHHLQAVIGLGFMLSTTAFWKGN*IHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAA...AGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CCA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: ILPILRVCGSMLVYIGCIFWKGN*IHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAA...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTATGCTCGTATATATTaGATGTATTTCTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ILPILRVCGSMLVYIGCIYARIY*MYFWKG
Trigger: ACCCTTCCAGAAATACATCCAATATATACGAGCATA...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATCATCCTGAGAGTCTGTaGGTCTATGCTCGTATATAT +
Preference number: 4 (lower is better)
Translates to: WVYARIYWMYFWKGNWIHHPESL*VYARIY
Trigger: ATATATACGAGCATAGACCCACAGACTCTCAGGATG...ATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp CTGTGGGTCGAAAAGGGCAGGATTATCATAAATGGAAAGAAGCTAGAGACATTTTCACTAAAACATGGCTaGGTTAGTTTGCAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LWVEKGRIIINGKKLETFSLKHG*VSLQLK
Trigger: TTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGA...AAATGTCTCTAGCTTCTTTCCATTTATGATAATCCTGCCCTTTTCGACCCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCGAGTCTCTGTCCCATTaGGTTCAAGCCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: ARIYWMYFWKGNWIHCRFESLSH*VQASKK
Trigger: CTTTTTACTGGCTTGAACCCAATGGGACAGAGACTC...GAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCAGGCAGTTATTGGTTTaGGCTTTATGCTATCCACTA +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFRQLLV*ALCYPL
Trigger: TAGTGGATAGCATAAAGCCCAAACCAATAACTGCCT...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp GGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTAGGCAGTTATTGGTTTaGGCTTTATGCTATCCACTA +
Preference number: 4 (lower is better)
Translates to: GSMLVYIGCISGRVIGYIRQLLV*ALCYPL
Trigger: TAGTGGATAGCATAAAGCCCAAACCAATAACTGCCT...AATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCAACTCTTCCTCTAGCTaGAGTTTTCATCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFNSSSS*SFHHLQ
Trigger: CTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTT...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACATTTCCCTCAGCTGCTTaGTTTATTAACTTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTFPSAA*FINLPS
Trigger: TGAAGGCAAGTTAATAAAGCAAGCAGCTGAGGGAAA...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR GCA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTTTGGTTTGGGCTTTATaGTATCCACTACAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSLVWAL*YPLQLK
Trigger: TTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAA...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR TCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCATAATGAATAGAGACTaGAGGAAGAGGTATTGGGAA +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFIMNRD*RKRYWE
Trigger: TTCCCAATACCTCTTCCTTCAGTCTCTATTCATTAT...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFFWKGN*IHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAA...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCACTAAAACATGGCTaGGTTAGTTTGCAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFSLKHG*VSLQLK
Trigger: TTTTAGCTGCAAACTAACCCAGCCATGTTTTAGTGA...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CCA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTTCTGGAAGGGTAATTaGATACATTGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFFWKGN*IHCRFF
Trigger: GAAGAATCTACAATGTATCCAATTACCCTTCCAGAA...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS CCA 90 bp TTTAGACCTGAGTGGGGCACAGCTGAACGTCTGAGCGCAGGCGGCTaGTCCTTGGGCCCGGTACTGGCGGTTCGCGAGGCGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: FRPEWGTAERLSAGG*SLGPVLAVREAGLG
Trigger: CCCCAAACCCGCCTCGCGAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCCCCACTCAGGTCTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301790.4
ENST00000539221.5
CDS CCA 90 bp GATTCTTCTGAGTGGGGCACAGCTGAACGTCTGAGCGCAGGCGGCTaGTCCTTGGGCCCGGTACTGGCGGTTCGCGAGGCGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: DSSEWGTAERLSAGG*SLGPVLAVREAGLG
Trigger: CCCCAAACCCGCCTCGCGAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCCCCACTCAGAAGAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS TCA 90 bp AGGTCTGGGTCTTGGTTTTCCCTGAGTGGGGCACAGCTGAACGTCTaGGCGCAGGCGGCTGGTCCTTGGGCCCGGTACTGGCGGTTCGCG +
Preference number: 5 (lower is better)
Translates to: RSGSWFSLSGAQLNV*AQAAGPWARYWRFA
Trigger: CGCGAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCCCCACTCAGGGAAAACCAAGACCCAGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS TCA 90 bp CTGCGAATCCCACGGATTCTTCTGAGTGGGGCACAGCTGAACGTCTaGGCGCAGGCGGCTGGTCCTTGGGCCCGGTACTGGCGGTTCGCG +
Preference number: 5 (lower is better)
Translates to: LRIPRILLSGAQLNV*AQAAGPWARYWRFA
Trigger: CGCGAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCCCCACTCAGAAGAATCCGTGGGATTCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR CAA 90 bp AACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTGCAGGCGGCTGGTCCTaGGGCCCGGTACTGGCGGTT +
Preference number: 5 (lower is better)
Translates to: NCSSSLRSFHQGVLYLLAAGGWS*GPVLAV
Trigger: AACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGC...AGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS CCA 90 bp CTGCCCTGTTCTAATGTGCCCGGCGGAGGCTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCCACGGATTCTTCTGAGTGGGGCACA +
Preference number: 5 (lower is better)
Translates to: LPCSNVPGGGCLAGS*TNAANPTDSSEWGT
Trigger: TGTGCCCCACTCAGAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGGGCACATTAGAACAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS CCA 90 bp CTGCCCTGTTCTAATGTGCCCGGCGGAGGCTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCCACGGATTCTTCTAATTCAAGGGGG +
Preference number: 5 (lower is better)
Translates to: LPCSNVPGGGCLAGS*TNAANPTDSSNSRG
Trigger: CCCCCTTGAATTAGAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGGGCACATTAGAACAGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000538712.1
ENST00000539221.5
CDS-3UTR CAA 90 bp TCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACGCCATATCTGAGGCCACCATCTAGCTTGTTATaGACCTTCCAGGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: SIRACSTCWLRGTPYLRPPSSLL*TFQEQP
Trigger: TGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG...TGGCCTCAGATATGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CAA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTACGGAGCCGCGGAAGCTaGGGCACTGGGGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLRSRGS*GTGGGS
Trigger: CGAGCCGCCCCCAGTGCCCAAGCTTCCGCGGCTCCG...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTATTGGCAGGCGGCTGGTCCTaGGGCCCGGTACTGGCGGTT +
Preference number: 5 (lower is better)
Translates to: VSVTLPLAGVFITFRQLLAGGWS*GPVLAV
Trigger: AACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGC...CAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539221.5
CDS-3UTR CAA 90 bp GCACAGTGCCTGGCGCATAAGAGATACACACTAGATACCAGATCCTTCCCATCCGTACGCTGGATGATCTaGTCCACCGGCAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AQCLAHKRYTLDTRSFPSVRWMI*STGKGR
Trigger: CCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTAC...GGATGGGAAGGATCTGGTATCTAGTGTGTATCTCTTATGCGCCAGGCACTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTCCGGGGTACGCCACATGGCTGGGTTAGTTaGCAGCTAAAAGGAATAAAT +
Preference number: 5 (lower is better)
Translates to: AFAPSIRACSTCWLRGTPHGWVS*QLKGIN
Trigger: ATTTATTCCTTTTAGCTGCAAACTAACCCAGCCATG...TGGCGTACCCCGGAGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CAA 90 bp ATGATCTTGTCCACCGGCAAGGGCAGGTACGTCCCATCTAGCTTGTTATTGACCCCTCAAACTCCTCACTaGGGGGAGCCAGATGGACCA +
Preference number: 5 (lower is better)
Translates to: MILSTGKGRYVPSSLLLTPQTPH*GEPDGP
Trigger: TGGTCCATCTGGCTCCCCCAAGTGAGGAGTTTGAGG...GGTCAATAACAAGCTAGATGGGACGTACCTGCCCTTGCCGGTGGACAAGATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS-3UTR CAA 90 bp AGCCAACTCAGAACTCCTCACATCCAGCCCCCAGACTACCGCTCATGGGCTCAGTACGTCCCATCTAGCTaGTTATTGACCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SQLRTPHIQPPDYRSWAQYVPSS*LLTFQE
Trigger: CTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTA...CTGAGCCCATGAGCGGTAGTCTGGGGGCTGGATGTGAGGAGTTCTGAGTTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CAGACGACTGTATTTCACCACGGCCCGATTGCTAAAGATGGAAGTAATGCTGCCGTACGCTGGATGATCTaGTCCACCGGCAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QTTVFHHGPIAKDGSNAAVRWMI*STGKGR
Trigger: CCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTAC...GGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CAA 90 bp CTTCCAGGAGCAGCCATGCAGCACATCCTCCAGACGACTGTATTTCACCACGGCCCATATCTGAGGCCATaGACAAAGTGCTCACAGTTC +
Preference number: 5 (lower is better)
Translates to: LPGAAMQHILQTTVFHHGPYLRP*TKCSQF
Trigger: GAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG...GCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CAA 90 bp ATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTTGTGTCTTCCTAGCTCCAGCAAGTGGACTTaGCCCCATGTCCATTGTGCC +
Preference number: 5 (lower is better)
Translates to: MSSKWTLPHVHCALCLPSSSKWT*PHVHCA
Trigger: GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGA...GCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCCGGAGCCGCGGAAGCTaGGGCACTGGGGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFRSRGS*GTGGGS
Trigger: CGAGCCGCCCCCAGTGCCCAAGCTTCCGCGGCTCCG...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCGTACGCTGGATGATCTaGTCCACCGGCAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSVRWMI*STGKGR
Trigger: CCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTAC...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp AACTGCTCCAGCAGCCTTCGCTCCTTCCATCAGGGCGTGCTCTACCTGCTGGCTGGAAGCATGTTCTTTTaGCTTGTGTCAGTAACTCTT +
Preference number: 5 (lower is better)
Translates to: NCSSSLRSFHQGVLYLLAGSMFF*LVSVTL
Trigger: AAGAGTTACTGACACAAGCAAAAAGAACATGCTTCC...AGCCAGCAGGTAGAGCACGCCCTGATGGAAGGAGCGAAGGCTGCTGGAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CAA 90 bp ACTTTGAGAAACTCGCCCTTCCTCATCTTCAAAGTGTGGGGTATGCATTCCAGAGCCCAGACTGCAGTGTaGGGGAACAGGAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: TLRNSPFLIFKVWGMHSRAQTAV*GNRRPL
Trigger: CAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGC...TCTGGAATGCATACCCCACACTTTGAAGATGAGGAAGGGCGAGTTTCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS CCA 90 bp TTGCCTTCATTCTCAGGCTTTGGAATTGAACTCCAGTCTGCTTTCTaGCTGGGTGTGGTCTCCAAGCTAACTACAGCCTTCTCCCCTTGC +
Preference number: 5 (lower is better)
Translates to: LPSFSGFGIELQSAF*LGVVSKLTTAFSPC
Trigger: GCAAGGGGAGAAGGCTGTAGTTAGCTTGGAGACCACACCCAGCCAGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAGAATGAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000538712.1
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CTTCCAGGAGCAGCCATGCAGCACATCCTCCAGACGACTGTATTTCACCACGGCACCTTCAGGCAGTTATaGGTTTGGGCTTTATGCTAT +
Preference number: 5 (lower is better)
Translates to: LPGAAMQHILQTTVFHHGTFRQL*VWALCY
Trigger: ATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGT...GCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CAA 90 bp CTTCCAGGAGCAGCCATGCAGCACATCCTCCAGACGACTGTATTTCACCACGGCACTTTTCTAGCTTTTTaGGGTGGTTTCAGCTACCAG +
Preference number: 5 (lower is better)
Translates to: LPGAAMQHILQTTVFHHGTFLAF*GGFSYQ
Trigger: CTGGTAGCTGAAACCACCCAAAAAAGCTAGAAAAGT...GCCGTGGTGAAATACAGTCGTCTGGAGGATGTGCTGCATGGCTGCTCCTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CAA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCGCAGGCGGCTGGTCCTaGGGCCCGGTACTGGCGGTT +
Preference number: 5 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFAGGWS*GPVLAV
Trigger: AACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGC...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCCTCCAGGTCTGGGTCTaGGTTTTCCCTCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSLQVWV*VFPQLL
Trigger: AAGCAGCTGAGGGAAAACCAAGACCCAGACCTGGAG...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCCTCAAACTCCTCACTaGGGGGAGCCAGATGGACCA +
Preference number: 5 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPPQTPH*GEPDGP
Trigger: TGGTCCATCTGGCTCCCCCAAGTGAGGAGTTTGAGG...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp ATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTGTACGCTGGATGATCTaGTCCACCGGCAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ILPILRVCGSMLVYIGCIVRWMI*STGKGR
Trigger: CCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTAC...AATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp ATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCTTGTGTCTTCCTAGCCCATATCTGAGGCCATaGACAAAGTGCTCACAGTTC +
Preference number: 5 (lower is better)
Translates to: MSSKWTLPHVHCALCLPSPYLRP*TKCSQF
Trigger: GAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG...GCTAGGAAGACACAAGGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCAACTTGCCCAGACTGCAGTGTaGGGGAACAGGAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: QLSLQSPAIISDLPSCQLAQTAV*GNRRPL
Trigger: CAATGGCCTCCTGTTCCCCAACACTGCAGTCTGGGC...AAGTTGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGTTATTGGGGAGTAGCCAGGGTTaGGCACTTGGGAGACACTCA +
Preference number: 5 (lower is better)
Translates to: VSVTLPLAGVFITFRQLLGSSQG*ALGRHS
Trigger: TGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCC...CAATAACTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CAA 90 bp CTACCAGCTATCACTACAATCCCCAGCCATAATTTCAGATCTTCCATCCTGTCAGGGAGTAGCCAGGGTTaGGCACTTGGGAGACACTCA +
Preference number: 5 (lower is better)
Translates to: LPAITTIPSHNFRSSILSGSSQG*ALGRHS
Trigger: TGAGTGTCTCCCAAGTGCCAAACCCTGGCTACTCCC...TGACAGGATGGAAGATCTGAAATTATGGCTGGGGATTGTAGTGATAGCTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTATACAGCCTTCTCCCCTaGCTGGATGCTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLYSLLP*LDASAL
Trigger: CAGGGCAGAAGCATCCAGCAAGGGGAGAAGGCTGTA...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CTTCGTTACTGGAAATATTCAAGCAGAGGTTTCTGGGATGTTTCTGATGGCACTTACAGCCTTCTCCCCTaGCTGGATGCTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LRYWKYSSRGFWDVSDGTYSLLP*LDASAL
Trigger: CAGGGCAGAAGCATCCAGCAAGGGGAGAAGGCTGTA...AGTGCCATCAGAAACATCCCAGAAACCTCTGCTTGAATATTTCCAGTAACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS-3UTR CAA 90 bp CAGACGACTGTATTTCACCACGGCCCGATTGCTAAAGATGGAAGTAATGCTGCCTTCACCACGGCCCGATaGCTAAAGATGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: QTTVFHHGPIAKDGSNAAFTTAR*LKMEVM
Trigger: CATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAA...GGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CAA 90 bp CACACTAGATACCAGATCCTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATTCACCACGGCCCGATaGCTAAAGATGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: HTRYQILPILRVCGSMLVFTTAR*LKMEVM
Trigger: CATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAA...TACGAGCATAGACCCACAGACTCTCAGGATGGGAAGGATCTGGTATCTAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGCTCCAGGTCTGGGTCTaGGTTTTCCCTCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: HPESLWVYARIYWMYFWKLQVWV*VFPQLL
Trigger: AAGCAGCTGAGGGAAAACCAAGACCCAGACCTGGAG...CTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATCCTCAAACTCCTCACTaGGGGGAGCCAGATGGACCA +
Preference number: 5 (lower is better)
Translates to: ESLWVYARIYWMYFWKGNPQTPH*GEPDGP
Trigger: TGGTCCATCTGGCTCCCCCAAGTGAGGAGTTTGAGG...ATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CAGACGACTGTATTTCACCACGGCCCGATTGCTAAAGATGGAAGTAATGCTGCCCAGGCAGTTATTGGTTaGGGCTTTATGCTATCCACT +
Preference number: 5 (lower is better)
Translates to: QTTVFHHGPIAKDGSNAAQAVIG*GFMLST
Trigger: AGTGGATAGCATAAAGCCCAAACCAATAACTGCCTG...GGCAGCATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAAATACAGTCGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CAA 90 bp AAGTGGAAGGGACCAATGTCCAGCAAGTGGACTTTGCCCCATGTCCATTGTGCCCATGGCTGGGTTAGTTaGCAGCTAAAAGGAATAAAT +
Preference number: 5 (lower is better)
Translates to: KWKGPMSSKWTLPHVHCAHGWVS*QLKGIN
Trigger: ATTTATTCCTTTTAGCTGCAAACTAACCCAGCCATG...GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGACATTGGTCCCTTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTACACTGTGGGTCGAAACATGTCCATTGTGCCTaGTGTCTTCCTAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: ESQFFLRSSSSELHCGSKHVHCA*CLPSQL
Trigger: GAGTTGGCTAGGAAGACACAAGGCACAATGGACATG...TTTCGACCCACAGTGTAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTATCAAACTCCTCACCCTaGCTGGATGCTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LRVCGSMLVYIGCISGRVSNSSP*LDASAL
Trigger: CAGGGCAGAAGCATCCAGCAAGGGTGAGGAGTTTGA...TACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CAA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCTACGTCCCATCTAGCTaGTTATTGACCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSYVPSS*LLTFQE
Trigger: CTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTA...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCGTACGCTGGATGATCTaGTCCACCGGCAAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFVRWMI*STGKGR
Trigger: CCTGCCCTTGCCGGTGGACAAGATCATCCAGCGTAC...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTGCTTGTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGCCATATCTGAGGCCATaGACAAAGTGCTCACAGTTC +
Preference number: 5 (lower is better)
Translates to: LLVSVTLPLAGVFITFRQPYLRP*TKCSQF
Trigger: GAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG...CTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CAA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCCTTCATTCTCAGGCTTaGGAATTGAACTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSLHSQA*ELNSSL
Trigger: CAGACTGGAGTTCAATTCCAAAGCCTGAGAATGAAG...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTACCATCTAGCTTGTTATaGACCTTCCAGGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLPSSLL*TFQEQP
Trigger: TGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTCCATCTAGCTTGTTATaGACCTTCCAGGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LPILRVCGSMLVYIGCISPSSLL*TFQEQP
Trigger: TGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GAGAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTTACGTCCCATCTAGCTaGTTATTGACCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: EKAREGSMFFLLVSVTLPYVPSS*LLTFQE
Trigger: CTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTA...AGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTCCTCTCCACTCCATGAGGAGTGGGCATGTGCTTTATTATATCAACAAGACTACGTCCCATCTAGCTaGTTATTGACCTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: FSSPLHEEWACALLYQQDYVPSS*LLTFQE
Trigger: CTCCTGGAAGGTCAATAACAAGCTAGATGGGACGTA...GTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTGCTTGTGTCAGTAACTCTTCCTCTAGCTGGAGTTTTCATCACCTTCAGGCAGCAGGCAGTTATTGGTTaGGGCTTTATGCTATCCACT +
Preference number: 5 (lower is better)
Translates to: LLVSVTLPLAGVFITFRQQAVIG*GFMLST
Trigger: AGTGGATAGCATAAAGCCCAAACCAATAACTGCCTG...CTGCCTGAAGGTGATGAAAACTCCAGCTAGAGGAAGAGTTACTGACACAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000539221.5
CDS-3UTR CAA 90 bp TTTCATCACCTTCAGGCAGTTATTGGTTTGGGCTTTATGCTATCCACTACAGCTCATGTCCATTGTGCCTaGTGTCTTCCTAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: FHHLQAVIGLGFMLSTTAHVHCA*CLPSQL
Trigger: GAGTTGGCTAGGAAGACACAAGGCACAATGGACATG...AGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGTGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS-3UTR CAA 90 bp CATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGACACACACACACACTTaGAGAAACTCGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HPESLWVYARIYWMYFWKTHTHT*RNSPFL
Trigger: GAGGAAGGGCGAGTTTCTCAAAGTGTGTGTGTGTGT...CTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTTACAGCCTTCTCCCCTaGCTGGATGCTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSYSLLP*LDASAL
Trigger: CAGGGCAGAAGCATCCAGCAAGGGGAGAAGGCTGTA...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCCTCCAGGTCTGGGTCTaGGTTTTCCCTCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFLQVWV*VFPQLL
Trigger: AAGCAGCTGAGGGAAAACCAAGACCCAGACCTGGAG...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCCTCAAACTCCTCACTaGGGGGAGCCAGATGGACCA +
Preference number: 5 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSPQTPH*GEPDGP
Trigger: TGGTCCATCTGGCTCCCCCAAGTGAGGAGTTTGAGG...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GCAGTTATTGGTTTGGGCTTTATGCTATCCACTACAGCTGAAATAACTGCTCCATTCACCACGGCCCGATaGCTAAAGATGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: AVIGLGFMLSTTAEITAPFTTAR*LKMEVM
Trigger: CATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAA...TGGAGCAGTTATTTCAGCTGTAGTGGATAGCATAAAGCCCAAACCAATAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394615.2
ENST00000536887.5
CDS-3UTR CAA 90 bp GTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGACCATCTAGCTTGTTATaGACCTTCCAGGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: VCGSMLVYIGCISGRVIGPSSLL*TFQEQP
Trigger: TGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG...TCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGGCCCTGAATAACGAATCTCAGTTTTTCTTAAGGTCCTCCTCCTCTGAGCTAACTTTTCTAGCTTTTTaGGGTGGTTTCAGCTACCAG +
Preference number: 5 (lower is better)
Translates to: WALNNESQFFLRSSSSELTFLAF*GGFSYQ
Trigger: CTGGTAGCTGAAACCACCCAAAAAAGCTAGAAAAGT...TAGCTCAGAGGAGGAGGACCTTAAGAAAAACTGAGATTCGTTATTCAGGGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTCCTCTCCACTCCATGAGGAGTGGGCATGTGCTTTATTATATCAACAAGACTCTGAGGGTTCCATCTaGCTCTTTTCCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: FSSPLHEEWACALLYQQDSEGSI*LFSTFF
Trigger: GAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGA...GTCTTGTTGATATAATAAAGCACATGCCCACTCCTCATGGAGTGGAGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTTCTGAGGGTTCCATCTaGCTCTTTTCCACATTCTTC +
Preference number: 5 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSSEGSI*LFSTFF
Trigger: GAAGAATGTGGAAAAGAGCAAGATGGAACCCTCAGA...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTCCAGCAAGTGGACTTaGCCCCATGTCCATTGTGCC +
Preference number: 5 (lower is better)
Translates to: WVYARIYWMYFWKGNWIHSSKWT*PHVHCA
Trigger: GGCACAATGGACATGGGGCAAAGTCCACTTGCTGGA...ATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp AAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTATCTCAGGCTTTGGAATaGAACTCCAGTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: KAREGSMFFLLVSVTLPLSQALE*NSSLLS
Trigger: AGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAGA...TAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTACAGGCAGTTATTGGTTaGGGCTTTATGCTATCCACT +
Preference number: 5 (lower is better)
Translates to: LRVCGSMLVYIGCISGRVQAVIG*GFMLST
Trigger: AGTGGATAGCATAAAGCCCAAACCAATAACTGCCTG...TACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCGGAAGCATGTTCTTTTaGCTTGTGTCAGTAACTCTT +
Preference number: 5 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSGSMFF*LVSVTL
Trigger: AAGAGTTACTGACACAAGCAAAAAGAACATGCTTCC...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTAGCCTATGCTCGTATATATaGGATGTATTTCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GKGRKHVLFACVSNSSSSLCSYI*DVFLEG
Trigger: CCCTTCCAGAAATACATCCAATATATACGAGCATAG...GCTAGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGGCTTGCTTTATTAACTaGCCTTCATTCTCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SHPESLWVYARIYWMYFWACFIN*PSFSGF
Trigger: AAAGCCTGAGAATGAAGGCAAGTTAATAAAGCAAGC...CCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGACCTTCAGGCAGTTATaGGTTTGGGCTTTATGCTAT +
Preference number: 5 (lower is better)
Translates to: HPESLWVYARIYWMYFWKTFRQL*VWALCY
Trigger: ATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGT...CTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GAAGGCAAGGGAAGGAAGCATGTTCTTTTTGCTTGTGTCAGTAACTCTTCCTCTGGAAGCATGTTCTTTTaGCTTGTGTCAGTAACTCTT +
Preference number: 5 (lower is better)
Translates to: EGKGRKHVLFACVSNSSSGSMFF*LVSVTL
Trigger: AAGAGTTACTGACACAAGCAAAAAGAACATGCTTCC...AGAGGAAGAGTTACTGACACAAGCAAAAAGAACATGCTTCCTTCCCTTGCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCTTCACCACGGCCCGATaGCTAAAGATGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFFTTAR*LKMEVM
Trigger: CATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAA...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACACCATCTAGCTTGTTATaGACCTTCCAGGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTPSSLL*TFQEQP
Trigger: TGGCTGCTCCTGGAAGGTCAATAACAAGCTAGATGG...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGCATGTTCTTTTaGCTTGTGTCAGTAACTCTT +
Preference number: 5 (lower is better)
Translates to: LPILRVCGSMLVYIGCISGSMFF*LVSVTL
Trigger: AAGAGTTACTGACACAAGCAAAAAGAACATGCTTCC...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp CTTCCCATCCTGAGAGTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTCTATGCTCGTATATATaGGATGTATTTCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: LPILRVCGSMLVYIGCISLCSYI*DVFLEG
Trigger: CCCTTCCAGAAATACATCCAATATATACGAGCATAG...AGAAATACATCCAATATATACGAGCATAGACCCACAGACTCTCAGGATGGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGACACACACACACACTTaGAGAAACTCGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YWMYFWKGNWIHCRFFQKTHTHT*RNSPFL
Trigger: GAGGAAGGGCGAGTTTCTCAAAGTGTGTGTGTGTGT...CTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCTCTCAGGCTTTGGAATaGAACTCCAGTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFSQALE*NSSLLS
Trigger: AGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAGA...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GTCTGTGGGTCTATGCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGAGCTTGCTTTATTAACTaGCCTTCATTCTCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: VCGSMLVYIGCISGRVIGACFIN*PSFSGF
Trigger: AAAGCCTGAGAATGAAGGCAAGTTAATAAAGCAAGC...TCCAATTACCCTTCCAGAAATACATCCAATATATACGAGCATAGACCCACAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTTCACCACGGCCCGATaGCTAAAGATGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFFTTAR*LKMEVM
Trigger: CATTACTTCCATCTTTAGCAATCGGGCCGTGGTGAA...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCCCATATCTGAGGCCATaGACAAAGTGCTCACAGTTC +
Preference number: 5 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFPYLRP*TKCSQF
Trigger: GAACTGTGAGCACTTTGTCAATGGCCTCAGATATGG...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCTCAGGCTTTGGAATaGAACTCCAGTCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFSQALE*NSSLLS
Trigger: AGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAGA...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCCTTCATTCTCAGGCTTaGGAATTGAACTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFLHSQA*ELNSSL
Trigger: CAGACTGGAGTTCAATTCCAAAGCCTGAGAATGAAG...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTCAGGCAGTTATTGGTTaGGGCTTTATGCTATCCACT +
Preference number: 5 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSQAVIG*GFMLST
Trigger: AGTGGATAGCATAAAGCCCAAACCAATAACTGCCTG...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCCAGGCAGTTATTGGTTaGGGCTTTATGCTATCCACT +
Preference number: 5 (lower is better)
Translates to: FWKGNWIHCRFFQKFTIFQAVIG*GFMLST
Trigger: AGTGGATAGCATAAAGCCCAAACCAATAACTGCCTG...GAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACCTTCAGGCAGTTATaGGTTTGGGCTTTATGCTAT +
Preference number: 5 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFTFRQL*VWALCY
Trigger: ATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGT...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp ATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAACCTTCAGGCAGTTATaGGTTTGGGCTTTATGCTAT +
Preference number: 5 (lower is better)
Translates to: MYFWKGNWIHCRFFQKFTTFRQL*VWALCY
Trigger: ATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGT...TGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp GCTCGTATATATTGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCACCTTCAGGCAGTTATaGGTTTGGGCTTTATGCTAT +
Preference number: 5 (lower is better)
Translates to: ARIYWMYFWKGNWIHCRFTFRQL*VWALCY
Trigger: ATAGCATAAAGCCCAAACCAATAACTGCCTGAAGGT...GAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCAATATATACGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TGGATGTATTTCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCCTATGCTCGTATATATaGGATGTATTTCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: WMYFWKGNWIHCRFFQKFLCSYI*DVFLEG
Trigger: CCCTTCCAGAAATACATCCAATATATACGAGCATAG...GAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGAAATACATCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536887.5
ENST00000539221.5
ENST00000540857.6
CDS-3UTR CAA 90 bp TCTGGAAGGGTAATTGGATACATTGTAGATTCTTCCAGAAGTTCACAATTTTCTGCTTGCTTTATTAACTaGCCTTCATTCTCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SGRVIGYIVDSSRSSQFSACFIN*PSFSGF
Trigger: AAAGCCTGAGAATGAAGGCAAGTTAATAAAGCAAGC...AGAAAATTGTGAACTTCTGGAAGAATCTACAATGTATCCAATTACCCTTCCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS CCA 72 bp CTACGCCCCTGGCGAGTTCCCAGTCGGCGCGGCCCCTaGTCGGCGGAGCCGCGGAAGCTTGGGCACTGGGGG +
Preference number: 6 (lower is better)
Translates to: LRPWRVPSRRGP*SAEPRKLGHWG
Trigger: CCCCCAGTGCCCAAGCTTCCGCGGCTCCGCCGACCAGGGGCCGCGCCGACTGGGAACTCGCCAGGGGCGTAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS CCA 72 bp GAGTGGGGCACAGCTGAACGTCTGAGCGCAGGCGGCTaGTCCTTGGGCCCGGTACTGGCGGTTCGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: EWGTAERLSAGG*SLGPVLAVREA
Trigger: CGCCTCGCGAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCCCCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000394615.2
ENST00000539221.5
ENST00000540857.6
CDS CAA 72 bp GGCACAGCTGAACGTCTGAGCGCAGGCGGCTGGTCCTaGGGCCCGGTACTGGCGGTTCGCGAGGCGGGTTTG +
Preference number: 6 (lower is better)
Translates to: GTAERLSAGGWS*GPVLAVREAGL
Trigger: CAAACCCGCCTCGCGAACCGCCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000539221.5
ENST00000540857.6
CDS TCA 72 bp CCACGGATTCTTCTGAGTGGGGCACAGCTGAACGTCTaGGCGCAGGCGGCTGGTCCTTGGGCCCGGTACTGG +
Preference number: 6 (lower is better)
Translates to: PRILLSGAQLNV*AQAAGPWARYW
Trigger: CCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCCCCACTCAGAAGAATCCGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540857.6
CDS TCA 72 bp TCTTGGTTTTCCCTGAGTGGGGCACAGCTGAACGTCTaGGCGCAGGCGGCTGGTCCTTGGGCCCGGTACTGG +
Preference number: 6 (lower is better)
Translates to: SWFSLSGAQLNV*AQAAGPWARYW
Trigger: CCAGTACCGGGCCCAAGGACCAGCCGCCTGCGCTCAGACGTTCAGCTGTGCCCCACTCAGGGAAAACCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394615.2
CDS GCA 72 bp GCCCACCTCAAACTCCTCACCCTTGCTGGATGCTTCTaGCCTGTTCTAATGTGCCCGGCGGAGGCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: AHLKLLTLAGCF*PVLMCPAEAAW
Trigger: CCAAGCAGCCTCCGCCGGGCACATTAGAACAGGGCAGAAGCATCCAGCAAGGGTGAGGAGTTTGAGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536887.5
CDS CCA 72 bp TCTAATGTGCCCGGCGGAGGCTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCCACGGATTCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: SNVPGGGCLAGS*TNAANPTDSSE
Trigger: CTCAGAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGGGCACATTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536887.5
ENST00000540857.6
CDS CCA 72 bp GAGAGTTCGAGCAAGCACCTTGACCGCTACGGAGAGTaGGCTCAGAGCTCTAGTCTAGCATCGTGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: ESSSKHLDRYGE*AQSSSLASCLA
Trigger: GGCCAGGCACGATGCTAGACTAGAGCTCTGAGCCCACTCTCCGTAGCGGTCAAGGTGCTTGCTCGAACTCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538712.1
CDS CCA 72 bp TCTAATGTGCCCGGCGGAGGCTGCTTGGCTGGGAGCTaGACCAACGCTGCGAATCCCACGGATTCTTCTAAT +
Preference number: 6 (lower is better)
Translates to: SNVPGGGCLAGS*TNAANPTDSSN
Trigger: ATTAGAAGAATCCGTGGGATTCGCAGCGTTGGTCCAGCTCCCAGCCAAGCAGCCTCCGCCGGGCACATTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301790.4
ENST00000538712.1
ENST00000539221.5
CDS CCA 72 bp TTCTCAGGCTTTGGAATTGAACTCCAGTCTGCTTTCTaGCTGGGTGTGGTCTCCAAGCTAACTACAGCCTTC +
Preference number: 6 (lower is better)
Translates to: FSGFGIELQSAF*LGVVSKLTTAF
Trigger: GAAGGCTGTAGTTAGCTTGGAGACCACACCCAGCCAGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000538712.1
ENST00000539221.5
ENST00000540857.6
CDS CAA 72 bp GCTTTATTAACTTGCCTTCATTCTCAGGCTTTGGAATaGAACTCCAGTCTGCTTTCTGGCTGGGTGTGGTCT +
Preference number: 6 (lower is better)
Translates to: ALLTCLHSQALE*NSSLLSGWVWS
Trigger: AGACCACACCCAGCCAGAAAGCAGACTGGAGTTCAATTCCAAAGCCTGAGAATGAAGGCAAGTTAATAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000538712.1
ENST00000539221.5
ENST00000540857.6
CDS CAA 72 bp GGTCTTGGTTTTCCCTCAGCTGCTTGCTTTATTAACTaGCCTTCATTCTCAGGCTTTGGAATTGAACTCCAG +
Preference number: 6 (lower is better)
Translates to: GLGFPSAACFIN*PSFSGFGIELQ
Trigger: CTGGAGTTCAATTCCAAAGCCTGAGAATGAAGGCAAGTTAATAAAGCAAGCAGCTGAGGGAAAACCAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301790.4
ENST00000538712.1
ENST00000539221.5
ENST00000540857.6