Pregenerated sensors for PLAAT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000127252Ensembl transcript IDs: ENST00000264735.4, ENST00000416012.1, ENST00000650797.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTGCCGGCACGAGGCTCTaGCCATGGGGAGCCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: IGIWNSNDALKISIHPRFAGTRL*PWGAAR Trigger: GCGGGCGGCTCCCCATGGTCAGAGCCTCGTGCCGGC...AAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000650797.1 |
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| CDS-3UTR GCA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTCTTGGCCTCGCAGCTaGCGACCTTGCCGCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: IIGIWNSNDALKISIHPRSWPRS*RPCRRR Trigger: CCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGA...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR GCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTTCTTGGCCTCGCAGCTaGCGACCTTGCCGCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLSWPRS*RPCRRR Trigger: CCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGA...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR CCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTCGGCTAGACCTCGCTTaGCCCCGAGCCCAGCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLRLDLA*PRAQLR Trigger: GCGAAGCTGGGCTCGGGGCCAAGCGAGGTCTAGCCG...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | GCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTTCTTTTCCTCCTCGGTTGGCCTGCTCTaGAACTCCTTCTCCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: AVFHNLIKTVSTPGFFSSSVGLL*NSFSIA Trigger: CGCTATGGAGAAGGAGTTTCAGAGCAGGCCAACCGA...GGAGGAAAAGAAACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS-3UTR CCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTTTCGATCAAGTCCCCTaGGCAGGGGTTGCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLFDQVP*AGVARV Trigger: TACCCTGGCAACCCCTGCCCAGGGGACTTGATCGAA...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTCCAGGGCCTTACTGCTaGATACAGACTTGGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLPGPYC*IQTWRL Trigger: CAAGCGCCAAGTCTGTATTCAGCAGTAAGGCCCTGG...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGCCAGGGCCTTACTGCTaGATACAGACTTGGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: IIGIWNSNDALKISIHPRPGPYC*IQTWRL Trigger: CAAGCGCCAAGTCTGTATTCAGCAGTAAGGCCCTGG...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTCGGTTGGCCTGCTCTaGAACTCCTTCTCCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: IIGIWNSNDALKISIHPRSVGLL*NSFSIA Trigger: CGCTATGGAGAAGGAGTTTCAGAGCAGGCCAACCGA...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | ATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTTCGGTTGGCCTGCTCTaGAACTCCTTCTCCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: IGIWNSNDALKISIHPRFSVGLL*NSFSIA Trigger: CGCTATGGAGAAGGAGTTTCAGAGCAGGCCAACCGA...AAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | GCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTTCTTTTCCTCCCTGTATTTCACAACTTaGTTAAGACTGTCTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: AVFHNLIKTVSTPGFFSSLYFTT*LRLSPP Trigger: GGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAG...GGAGGAAAAGAAACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS-3UTR TCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTACTCTGACCGCTTTATaGTTTCTTCCACAGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLTLTAL*FLPQGE Trigger: CTCTCCCTGTGGAAGAAATCATAAAGCGGTCAGAGT...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | TTACAATTTGCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTTCACTCTGACCGCTTTATaGTTTCTTCCACAGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LQFAVFHNLIKTVSTPGFTLTAL*FLPQGE Trigger: CTCTCCCTGTGGAAGAAATCATAAAGCGGTCAGAGT...GAAACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGCAAATTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS-3UTR TCA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGACTCTGACCGCTTTATaGTTTCTTCCACAGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: IIGIWNSNDALKISIHPRTLTAL*FLPQGE Trigger: CTCTCCCTGTGGAAGAAATCATAAAGCGGTCAGAGT...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | CCTTTACAATTTGCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTTCTCTGCTAGAATCTaGCCCAGCTTTTCCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: PLQFAVFHNLIKTVSTPGFSARI*PSFSKQ Trigger: TTGTTTGGAAAAGCTGGGTCAGATTCTAGCAGAGAA...ACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGCAAATTGTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS-3UTR GCA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGACATCCTTCAAGAGCTaGATTTTCACCAGGGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: IIGIWNSNDALKISIHPRTSFKS*IFTRAL Trigger: TAAGGCCCTGGTGAAAATGCAGCTCTTGAAGGATGT...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | CCTTTACAATTTGCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTCCAATTACAAACTCTaGCCGCTTTATGATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLQFAVFHNLIKTVSTPGSNYKL*PLYDFF Trigger: GAAGAAATCATAAAGCGGTCAGAGTTTGTAATTGGA...ACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGCAAATTGTAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS-3UTR GCA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGAATGCCATCTACAGGTaGTATGTTGATAACGTAACC | + |
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Preference number: 4 (lower is better) Translates to: IIGIWNSNDALKISIHPRNAIYR*YVDNVT Trigger: GGTTACGTTATCAACATAGCACCTGTAGATGGCATT...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR GCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTAATGCCATCTACAGGTaGTATGTTGATAACGTAACC | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLNAIYR*YVDNVT Trigger: GGTTACGTTATCAACATAGCACCTGTAGATGGCATT...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR CCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTTCCATCATAGGAATCTaGAACAGTAATGATGCACTG | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLSIIGI*NSNDAL Trigger: CAGTGCATCATTACTGTTCCAGATTCCTATGATGGA...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTTCCAATTACAAACTCTaGCCGCTTTATGATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GIWNSNDALKISIHPRFLSNYKL*PLYDFF Trigger: GAAGAAATCATAAAGCGGTCAGAGTTTGTAATTGGA...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGAATGTTCACAGTTGTTaGCAAGTAAGTTATAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IIGIWNSNDALKISIHPRNVHSC*QVSYRP Trigger: TGGCCTATAACTTACTTGTCAACAACTGTGAACATT...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | TTACAATTTGCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTTCAATGTTCACAGTTGTTaGCAAGTAAGTTATAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LQFAVFHNLIKTVSTPGFNVHSC*QVSYRP Trigger: TGGCCTATAACTTACTTGTCAACAACTGTGAACATT...GAAACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGCAAATTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS-3UTR CCA 90 bp | ATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTTCCATCATAGGAATCTaGAACAGTAATGATGCACTG | + |
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Preference number: 4 (lower is better) Translates to: IGIWNSNDALKISIHPRFSIIGI*NSNDAL Trigger: CAGTGCATCATTACTGTTCCAGATTCCTATGATGGA...AAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR TCA 90 bp | ATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTAATGTTCACAGTTGTTaGCAAGTAAGTTATAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IGIWNSNDALKISIHPRFNVHSC*QVSYRP Trigger: TGGCCTATAACTTACTTGTCAACAACTGTGAACATT...AAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CCA 90 bp | TCTTCTCGCACCGGGAGGCAGCTGTGTGTGTCCTGGGGTCTCTCTTaGCCTCGCAGCTGCCGACCTTGCCGCCGGCGGCCGCGGGACGAC | + |
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Preference number: 5 (lower is better) Translates to: SSRTGRQLCVSWGLS*PRSCRPCRRRPRDD Trigger: GTCGTCCCGCGGCCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGACACACACAGCTGCCTCCCGGTGCGAGAAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS GCA 90 bp | GGGAGGCAGCTGTGTGTGTCCTGGGGTCTCTCTTGGCCTCGCAGCTaGCGACCTTGCCGCCGGCGGCCGCGGGACGACTCCATCTGTACC | + |
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Preference number: 5 (lower is better) Translates to: GRQLCVSWGLSWPRS*RPCRRRPRDDSICT Trigger: GGTACAGATGGAGTCGTCCCGCGGCCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGACACACACAGCTGCCTCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS GCA 90 bp | CTGTGTGTGTCCTGGGGTCTCTCTTGGCCTCGCAGCTGCCGACCTTaGCGCCGGCGGCCGCGGGACGACTCCATCTGTACCCGGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: LCVSWGLSWPRSCRP*RRRPRDDSICTRET Trigger: TGTCTCCCGGGTACAGATGGAGTCGTCCCGCGGCCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGACACACACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CCA 90 bp | AAGCCGGGGTCTTCTTCTCGCACCGGGAGGCAGCTGTGTGTGTCCTaGGGTCTCTCTTGGCCTCGCAGCTGCCGACCTTGCCGCCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: KPGSSSRTGRQLCVS*GLSWPRSCRPCRRR Trigger: CCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGACACACACAGCTGCCTCCCGGTGCGAGAAGAAGACCCCGGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR CAA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTCCGGCTAGACCTCGCTaGGCCCCGAGCCCAGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: GIWNSNDALKISIHPRFLPARPR*APSPAS Trigger: CGAAGCTGGGCTCGGGGCCAAGCGAGGTCTAGCCGG...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000650797.1 |
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| CDS-3UTR CAA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGGTCCTGGGGTCTCTCTaGGCCTCGCAGCTGCCGACC | + |
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Preference number: 5 (lower is better) Translates to: IIGIWNSNDALKISIHPRVLGSL*ASQLPT Trigger: GGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGAC...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR CAA 90 bp | TTTGCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTTCTTTTCCGTACTTATCGCTCGGTaGGCCTGCTCTGAAACTCCT | + |
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Preference number: 5 (lower is better) Translates to: FAVFHNLIKTVSTPGFFSVLIAR*ACSETP Trigger: AGGAGTTTCAGAGCAGGCCAACCGAGCGATAAGTAC...GGAAAAGAAACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS-3UTR CAA 90 bp | ATCATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGCTGCTGAATACAGACTaGGCGCTTGTAAAGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: IIGIWNSNDALKISIHPRLLNTD*ALVKDA Trigger: TGCGTCCTTTACAAGCGCCAAGTCTGTATTCAGCAG...CCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR CAA 90 bp | GGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTCTTCTGCTGAATACAGACTaGGCGCTTGTAAAGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: GIWNSNDALKISIHPRFLLLNTD*ALVKDA Trigger: TGCGTCCTTTACAAGCGCCAAGTCTGTATTCAGCAG...AAGAAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR CAA 90 bp | ATAGGAATCTGGAACAGTAATGATGCACTGAAAATAAGTATTCACCCCAGGTTTGTACTTATCGCTCGGTaGGCCTGCTCTGAAACTCCT | + |
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Preference number: 5 (lower is better) Translates to: IGIWNSNDALKISIHPRFVLIAR*ACSETP Trigger: AGGAGTTTCAGAGCAGGCCAACCGAGCGATAAGTAC...AAACCTGGGGTGAATACTTATTTTCAGTGCATCATTACTGTTCCAGATTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS-3UTR CAA 90 bp | GCTGTATTTCACAACTTGATTAAGACTGTCTCCACCCCAGGTTTCTTTTCCTCCGCTGTATTTCACAACTaGATTAAGACTGTCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: AVFHNLIKTVSTPGFFSSAVFHN*IKTVST Trigger: GGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGC...GGAGGAAAAGAAACCTGGGGTGGAGACAGTCTTAATCAAGTTGTGAAATACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416012.1 |
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| CDS TCA 90 bp | CTCCTTCTCCATAGCGAAGCAATGTCACAAAATGTTCACAGTTGTTaGCAAGTAAGTTATAGGCCACCTCCTGTCCAATTACAAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: LLLHSEAMSQNVHSC*QVSYRPPPVQLQTL Trigger: CAGAGTTTGTAATTGGACAGGAGGTGGCCTATAACTTACTTGTCAACAACTGTGAACATTTTGTGACATTGCTTCGCTATGGAGAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264735.4 ENST00000416012.1 ENST00000650797.1 |
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| CDS GCA 72 bp | TCCTGGGGTCTCTCTTGGCCTCGCAGCTGCCGACCTTaGCGCCGGCGGCCGCGGGACGACTCCATCTGTACC | + |
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Preference number: 6 (lower is better) Translates to: SWGLSWPRSCRP*RRRPRDDSICT Trigger: GGTACAGATGGAGTCGTCCCGCGGCCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CAA 72 bp | GTCCTGGGGTCTCTCTTGGCCTCGCAGCTGCCGACCTaGCCGCCGGCGGCCGCGGGACGACTCCATCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: VLGSLLASQLPT*PPAAAGRLHLY Trigger: GTACAGATGGAGTCGTCCCGCGGCCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CAA 90 bp | GCTGTGTGTGTCCTGGGGTCTCTCTTGGCCTCGCAGCTGCCGACCTaGCCGCCGGCGGCCGCGGGACGACTCCATCTGTACCCGGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: AVCVLGSLLASQLPT*PPAAAGRLHLYPGD Trigger: GTCTCCCGGGTACAGATGGAGTCGTCCCGCGGCCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGACACACACAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CAA 90 bp | TTCTTCTCGCACCGGGAGGCAGCTGTGTGTGTCCTGGGGTCTCTCTaGGCCTCGCAGCTGCCGACCTTGCCGCCGGCGGCCGCGGGACGA | + |
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Preference number: 6 (lower is better) Translates to: FFSHREAAVCVLGSL*ASQLPTLPPAAAGR Trigger: TCGTCCCGCGGCCGCCGGCGGCAAGGTCGGCAGCTGCGAGGCCAAGAGAGACCCCAGGACACACACAGCTGCCTCCCGGTGCGAGAAGAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CCA 72 bp | CTGATAGCCAGGACGGAACACTTCGATCAAGTCCCCTaGGCAGGGGTTGCCAGGGTAGTTCAAACTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LIARTEHFDQVP*AGVARVVQTEA Trigger: TGCTTCAGTTTGAACTACCCTGGCAACCCCTGCCCAGGGGACTTGATCGAAGTGTTCCGTCCTGGCTATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CAA 90 bp | TTCAAGAGCTGCATTTTCACCAGGGCCTTACTGCTGAATACAGACTaGGCGCTTGTAAAGGACGCAGGAATGCCATCTACAGGTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: FKSCIFTRALLLNTD*ALVKDAGMPSTGAM Trigger: CATAGCACCTGTAGATGGCATTCCTGCGTCCTTTACAAGCGCCAAGTCTGTATTCAGCAGTAAGGCCCTGGTGAAAATGCAGCTCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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| CDS CAA 72 bp | TGCATTTTCACCAGGGCCTTACTGCTGAATACAGACTaGGCGCTTGTAAAGGACGCAGGAATGCCATCTACA | + |
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Preference number: 6 (lower is better) Translates to: CIFTRALLLNTD*ALVKDAGMPST Trigger: TGTAGATGGCATTCCTGCGTCCTTTACAAGCGCCAAGTCTGTATTCAGCAGTAAGGCCCTGGTGAAAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264735.4 ENST00000650797.1 |
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