RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLA2G4C (Homo sapiens)

Ensembl gene IDs: ENSG00000105499

Ensembl transcript IDs: ENST00000354276.7, ENST00000593765.5, ENST00000594156.5, ENST00000594790.1, ENST00000595161.5, ENST00000595487.5, ENST00000595899.5, ENST00000596138.1, ENST00000596352.5, ENST00000596353.1, ENST00000596510.5, ENST00000597377.1, ENST00000597713.1, ENST00000598457.5, ENST00000598488.1, ENST00000598813.5, ENST00000599063.5, ENST00000599111.5, ENST00000599239.5, ENST00000599300.5, ENST00000599921.6, ENST00000600170.1, ENST00000601946.1

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCAGGACCCCAAGGCAGGCAATGTGAGCCCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAACTGGGGCCTCATCAGCCTCAATCCT +
Preference number: 1 (lower is better)
Translates to: TQDPKAGNVSPQSSA*AQHSNNWGLISLNP
Trigger: AGGATTGAGGCTGATGAGGCCCCAGTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGGGGTCCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR TCA 90 bp GAGAAGATATTGCCCAAGTGGATCCAGAGACCCCTGCGAGGTACGTaGCGGCATCCAACAGGCCCTGTTCTTTCATCTCACTCAGGACCC +
Preference number: 1 (lower is better)
Translates to: EKILPKWIQRPLRGT*RHPTGPVLSSHSGP
Trigger: GGGTCCTGAGTGAGATGAAAGAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCCACTTGGGCAATATCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR GCA 90 bp ATTGTCAGACACTCATGCTCCAGCTCCAGGATCTCCCGAGGGACCTaGAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTC +
Preference number: 1 (lower is better)
Translates to: IVRHSCSSSRISRGT*RTNFTTFSSLDAFF
Trigger: GAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCATGAGTGTCTGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR GCA 90 bp GCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATaGTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTC +
Preference number: 1 (lower is better)
Translates to: AIWTLDMMLLIVRHS*SSSRISRGTCRTNF
Trigger: GAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR CCA 90 bp ATCGATGTTTCAGGTCAGCCTCGAGAGCTTCCATGTCACCATCATTaGTGTAGAGAGAAGATATTGCCCAAGTGGATCCAGAGACCCCTG +
Preference number: 1 (lower is better)
Translates to: IDVSGQPRELPCHHH*CREKILPKWIQRPL
Trigger: CAGGGGTCTCTGGATCCACTTGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTCTCGAGGCTGACCTGAAACATCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR TCA 90 bp TGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTaGATGACGCTATCAAAATCACAGTCTAGCTGGTCACTGGTGATT +
Preference number: 1 (lower is better)
Translates to: CRTNFTTFSSLDAFF*MTLSKSQSSWSLVI
Trigger: AATCACCAGTGACCAGCTAGACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR TCA 90 bp CTGGCTAGAAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTaGACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATG +
Preference number: 1 (lower is better)
Translates to: LARSAVIKEQWKALV*TITFILAIWTLDMM
Trigger: CATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTTCTAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR TCA 90 bp TCCAGAGACCCCTGCGAGGTACGTGACGGCATCCAACAGGCCCTGTTCTTTCATCCAAGGCAGGCAATGTaGGCCCGCAGTCCTCCGCCT +
Preference number: 2 (lower is better)
Translates to: SRDPCEVRDGIQQALFFHPRQAM*ARSPPP
Trigger: AGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGG...ATGAAAGAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR-3UTR TCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCCTAGCTGGTCACTGGTaGTTGGCCCTGTTAGGACAG +
Preference number: 2 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFLAGHW*LALLGQ
Trigger: CTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAG...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR GCA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTGCTGAGGCTCATCTATaGCAAGCAGCAACTTCGGGC +
Preference number: 2 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSAEAHL*QAATSG
Trigger: GCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGC...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
3UTR-3UTR CCA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCAAATCACAGTCTAGCTaGTCACTGGTGATTGGCCCT +
Preference number: 2 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDAKSQSS*SLVIGP
Trigger: AGGGCCAATCACCAGTGACCAGCTAGACTGTGATTT...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR TCA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGCCATaGAGCGTGTGGCTGAAGGGA +
Preference number: 2 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKVNSRP*SVWLKG
Trigger: TCCCTTCAGCCACACGCTTCATGGCCTTGAGTTCAC...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR TCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCGTGAACTCAAGGCCATaGAGCGTGTGGCTGAAGGGA +
Preference number: 2 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVVNSRP*SVWLKG
Trigger: TCCCTTCAGCCACACGCTTCATGGCCTTGAGTTCAC...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR TCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCTAGCTGGTCACTGGTaGTTGGCCCTGTTAGGACAG +
Preference number: 2 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLLAGHW*LALLGQ
Trigger: CTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAG...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR GCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTATCTCCCGAGGGACCTaGAGGACAAATTTCACCACC +
Preference number: 2 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSISRGT*RTNFTT
Trigger: GGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR CCA 90 bp AATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCACTAAAAAGTGAGAGATaGCCGGGTGCGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: NLLPKWVMETKAPSAEKPLKSER*PGAVAH
Trigger: ATGAGCCACCGCACCCGGCCATCTCTCACTTTTTAG...TGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR-3UTR CCA 90 bp CTGTCGGGTAAATCGATGTTTCAGGTCAGCCTCGAGAGCTTCCATGTCACCATCCTTCAGAGCTTCCCATaGTGCACTGCGGTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: LSGKSMFQVSLESFHVTILQSFP*CTAVRK
Trigger: TTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAG...GATGGTGACATGGAAGCTCTCGAGGCTGACCTGAAACATCGATTTACCCGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR-3UTR TCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCTTAGGACAGCCAAGGTaGACTCAAGGCCATGAAGCG +
Preference number: 2 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLLGQPR*TQGHEA
Trigger: CGCTTCATGGCCTTGAGTTCACCTTGGCTGTCCTAA...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR GCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCATCTCCCGAGGGACCTaGAGGACAAATTTCACCACC +
Preference number: 2 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLISRGT*RTNFTT
Trigger: GGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR TCA 90 bp TTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGAAGACATCTAAAAAGTaGGAGATGGCCGGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: LNLLPKWVMETKAPSAEKKTSKK*EMAGCG
Trigger: ACCGCACCCGGCCATCTCTCACTTTTTAGATGTCTT...CTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR-3UTR CCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTAAATCACAGTCTAGCTaGTCACTGGTGATTGGCCCT +
Preference number: 2 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSKSQSS*SLVIGP
Trigger: AGGGCCAATCACCAGTGACCAGCTAGACTGTGATTT...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR CCA 90 bp AATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCAAGAAACTGGAATGTCTaGAGAGCTGCCAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: NLLPKWVMETKAPSAEKPRNWNV*RAASIW
Trigger: CCAAATGCTGGCAGCTCTCCAGACATTCCAGTTTCT...TGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR-3UTR TCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCTTAGGACAGCCAAGGTaGACTCAAGGCCATGAAGCG +
Preference number: 2 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLLGQPR*TQGHEA
Trigger: CGCTTCATGGCCTTGAGTTCACCTTGGCTGTCCTAA...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR GCA 90 bp TTCTTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGGAATGTCTGGAGAGCTaGCAGCATTTGGGTGATAAT +
Preference number: 2 (lower is better)
Translates to: FLNLLPKWVMETKAPSAEECLES*QHLGDN
Trigger: ATTATCACCCAAATGCTGGCAGCTCTCCAGACATTC...CTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR-3UTR CCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTAGGCCCACAGTGCCCTaGAAGCTGAGGCTCATCTAT +
Preference number: 2 (lower is better)
Translates to: HDLSPSSYFYRANLCRATRPTVP*KLRLIY
Trigger: ATAGATGAGCCTCAGCTTCCAGGGCACTGTGGGCCT...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
3UTR-3UTR TCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTTTAGGACAGCCAAGGTaGACTCAAGGCCATGAAGCG +
Preference number: 2 (lower is better)
Translates to: HDLSPSSYFYRANLCRATLGQPR*TQGHEA
Trigger: CGCTTCATGGCCTTGAGTTCACCTTGGCTGTCCTAA...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR TCA 90 bp ATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCTTGGACGCCTTCTTCTaGATGACGCTATCAAAATCA +
Preference number: 2 (lower is better)
Translates to: IWTLDMMLLIVRHSCSSSLDAFF*MTLSKS
Trigger: TGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAA...GGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR TCA 90 bp TTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGTCAGGACACAGTTGCTaGACAAGTGAGTGCATTTTA +
Preference number: 2 (lower is better)
Translates to: LNLLPKWVMETKAPSAEKSGHSC*TSECIL
Trigger: TAAAATGCACTCACTTGTTCAGCAACTGTGTCCTGA...CTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR-3UTR GCA 90 bp ATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCAGAGTGAGTGCATTTTATaGTTAGGAAATAGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: ICFRSGLWKQRPPVQRSQSECIL*LGNRVR
Trigger: CCTTACCCTATTTCCTAAGCATAAAATGCACTCACT...CTGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR TCA 72 bp CCCAAGGCAGGCAATGTGAGCCCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAACTGGGGCCTCATCAGC +
Preference number: 3 (lower is better)
Translates to: PKAGNVSPQSSA*AQHSNNWGLIS
Trigger: GCTGATGAGGCCCCAGTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR GCA 72 bp CAGGCCCACAGTGCCCTGGAAGCTGAGGCTCATCTATaGCAAGCAGCAACTTCGGGCACTATCCTTCGGGTA +
Preference number: 3 (lower is better)
Translates to: QAHSALEAEAHL*QAATSGTILRV
Trigger: TACCCGAAGGATAGTGCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGCTTCCAGGGCACTGTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
3UTR TCA 72 bp TTGCCCAAGTGGATCCAGAGACCCCTGCGAGGTACGTaGCGGCATCCAACAGGCCCTGTTCTTTCATCTCAC +
Preference number: 3 (lower is better)
Translates to: LPKWIQRPLRGT*RHPTGPVLSSH
Trigger: GTGAGATGAAAGAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCCACTTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR TCA 72 bp GGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGCCATaGAGCGTGTGGCTGAAGGGAGTGAAGAACAGGAAG +
Preference number: 3 (lower is better)
Translates to: GPVRTAKVNSRP*SVWLKGVKNRK
Trigger: CTTCCTGTTCTTCACTCCCTTCAGCCACACGCTTCATGGCCTTGAGTTCACCTTGGCTGTCCTAACAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR GCA 72 bp ACATTGGACATGATGCTTCTGATTGTCAGACACTCATaGTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGG +
Preference number: 3 (lower is better)
Translates to: TLDMMLLIVRHS*SSSRISRGTCR
Trigger: CCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR CCA 72 bp CGGCCGCCTTTTCTTCTTTCTGGAGCCCAGGAATTATaGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTC +
Preference number: 3 (lower is better)
Translates to: RPPFLLSGAQEL*KLQSFPWCTAV
Trigger: GACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCAGAAAGAAGAAAAGGCGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR TCA 72 bp TCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATaGCGCTATCAAAATCACAGTCTAGCTGGTCACTGG +
Preference number: 3 (lower is better)
Translates to: SPPSAPWTPSSE*RYQNHSLAGHW
Trigger: CCAGTGACCAGCTAGACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR CCA 72 bp TCAGGTCAGCCTCGAGAGCTTCCATGTCACCATCATTaGTGTAGAGAGAAGATATTGCCCAAGTGGATCCAG +
Preference number: 3 (lower is better)
Translates to: SGQPRELPCHHH*CREKILPKWIQ
Trigger: CTGGATCCACTTGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTCTCGAGGCTGACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595487.5
3UTR-3UTR CAA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTCTGGCCATCTGGACATaGGACATGATGCTTCTGATT +
Preference number: 3 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSLAIWT*DMMLLI
Trigger: AATCAGAAGCATCATGTCCAATGTCCAGATGGCCAG...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR TCA 72 bp GGGGTGAACTCGAACCAGGTCTCAGGACACAGTTGCTaGACAAGTGAGTGCATTTTATGCTTAGGAAATAGG +
Preference number: 3 (lower is better)
Translates to: GVNSNQVSGHSC*TSECILCLGNR
Trigger: CCTATTTCCTAAGCATAAAATGCACTCACTTGTTCAGCAACTGTGTCCTGAGACCTGGTTCGAGTTCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR CCA 72 bp AAGAGAAACTGGAATGTCTGGAGAGCTGCCAGCATTTaGGTGATAATCGGACCTATGGAGAAGGAAGACATC +
Preference number: 3 (lower is better)
Translates to: KRNWNVWRAASI*VIIGPMEKEDI
Trigger: GATGTCTTCCTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCAGTTTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
3UTR TCA 72 bp AATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTaGATGACGCTATCAAAATCACAGTCTAGCTGGTCA +
Preference number: 3 (lower is better)
Translates to: NFTTFSSLDAFF*MTLSKSQSSWS
Trigger: TGACCAGCTAGACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR TCA 72 bp AGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTaGACTATCACATTCATTCTGGCCATCTGGACATTG +
Preference number: 3 (lower is better)
Translates to: SAVIKEQWKALV*TITFILAIWTL
Trigger: CAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR-3UTR CAA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATCTGGCCATCTGGACATaGGACATGATGCTTCTGATT +
Preference number: 3 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHLAIWT*DMMLLI
Trigger: AATCAGAAGCATCATGTCCAATGTCCAGATGGCCAG...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GCGGTCAGAAAATTCTCAGTCCTCCTGGGCATGATGGCGGGCGCCTGTAATCCCCCAAGGCAGGCAATGTaGGCCCGCAGTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: AVRKFSVLLGMMAGACNPPRQAM*ARSPPP
Trigger: AGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGG...GGGATTACAGGCGCCCGCCATCATGCCCAGGAGGACTGAGAATTTTCTGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR TCA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCCGGAATCTCCGCGGGTaGAGACTGCGGGGATCCTCG +
Preference number: 4 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDARNLRG*RLRGSS
Trigger: CGAGGATCCCCGCAGTCTTCACCCGCGGAGATTCCG...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCCCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFPQSSA*AQHSNN
Trigger: GTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGG...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp GATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCTGGGGCGTGTGCGCATaGGCGGTGGAGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: DLPRDLQDKFHHLQLLGRWGVCA*AVELVL
Trigger: GAGCACAAGCTCCACCGCGCATGCGCACACGCCCCA...GCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTGGGTCTGGGGCGTGTaGGCATGCGCGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SRGTCRTNFTTFSSLDAFWVWGV*ACAVEL
Trigger: AAGCTCCACCGCGCATGCGCACACGCCCCAGACCCA...GAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TCGGGCACTATCCTTCGGGTAGTAGAGCTGAACGAGCATAGGCATCAGAGCGACCCAAGGCAGGCAATGTaGGCCCGCAGTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SGTILRVVELNEHRHQSDPRQAM*ARSPPP
Trigger: AGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGG...GTCGCTCTGATGCCTATGCTCGTTCAGCTCTACTACCCGAAGGATAGTGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR GCA 90 bp GATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCTCCGCGGGTGAAGACTaGGGGGATCCTCGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: DLPRDLQDKFHHLQLLGRSAGED*GDPRCQ
Trigger: TTGGCACCGAGGATCCCCGCAGTCTTCACCCGCGGA...GCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACTGGGGCGTGTGCGCATaGGCGGTGGAGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDWGVCA*AVELVL
Trigger: GAGCACAAGCTCCACCGCGCATGCGCACACGCCCCA...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACTGGGTCTGGGGCGTGTaGGCATGCGCGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDWVWGV*ACAVEL
Trigger: AAGCTCCACCGCGCATGCGCACACGCCCCAGACCCA...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp GCGGTCAGAAAATTCTCAGTCCTCCTGGGCATGATGGCGGGCGCCTGTAATCCCGGATCCAGAGACCCCTaGGAGGTACGTGACGGCATC +
Preference number: 4 (lower is better)
Translates to: AVRKFSVLLGMMAGACNPGSRDP*EVRDGI
Trigger: GATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCC...GGGATTACAGGCGCCCGCCATCATGCCCAGGAGGACTGAGAATTTTCTGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR CCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTGAGGAGGTCGCGGGCTaGAGGTGTTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPEEVAG*RCFLLV
Trigger: GACCAGGAGGAAACACCTCCAGCCCGCGACCTCCTC...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GCGGTCAGAAAATTCTCAGTCCTCCTGGGCATGATGGCGGGCGCCTGTAATCCCTGTGCGCATGCGCGGTaGAGCTTGTGCTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: AVRKFSVLLGMMAGACNPCAHAR*SLCSGI
Trigger: GATTCCGGAGCACAAGCTCCACCGCGCATGCGCACA...GGGATTACAGGCGCCCGCCATCATGCCCAGGAGGACTGAGAATTTTCTGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR TCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGTTTCCTCCTGGTCCTaGGCAGGGCCAACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDVSSWS*AGPTWR
Trigger: CCTCCAGGTTGGCCCTGCTCAGGACCAGGAGGAAAC...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCAATTCTCAGTCCTCCTaGGCCTGGGTCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SRGTCRTNFTTFSSLDAFNSQSS*AWVWGV
Trigger: CACGCCCCAGACCCAGGCTCAGGAGGACTGAGAATT...GAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTAATTCTCAGTCCTCCTaGGCCTGGGTCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPNSQSS*AWVWGV
Trigger: CACGCCCCAGACCCAGGCTCAGGAGGACTGAGAATT...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTGGGCACCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: FRASHGALRSENSQSSWAPQSSA*AQHSNN
Trigger: GTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGG...TGCCCAGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR TCA 90 bp GGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCAGCGTGGTGAGGGGTaGACTCGAACCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GSPEGPAGQISPPSAPWTQRGEG*TRTRSL
Trigger: CAGAGACCTGGTTCGAGTTCACCCCTCACCACGCTG...CGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCCAGCGTGGTGAGGGGTaGACTCGAACCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFQRGEG*TRTRSL
Trigger: CAGAGACCTGGTTCGAGTTCACCCCTCACCACGCTG...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CACAGTGCCCTGGAAGCTGAGGCTCATCTATGCCAAGCAGCAACTTCGGGCACTAGTCGAAGGAGAGGATaGGGTGAACCTCCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: HSALEAEAHLCQAATSGTSRRRG*GEPPAS
Trigger: CGACGCGGGAGGTTCACCTCATCCTCTCCTTCGACT...AGTGCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGCTTCCAGGGCACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR TCA 90 bp AGTGGATCCAGAGACCCCTGCGAGGTACGTGACGGCATCCAACAGGCCCTGTTCAGGTGGAGGTGCCAGTaGGCAGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: SGSRDPCEVRDGIQQALFRWRCQ*AEIMPL
Trigger: CAATGGCATGATCTCTGCTCACTGGCACCTCCACCT...GAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR GCA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGGCGCGGTGGAGCTTGTaGTCCGGAATCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRARWSL*SGIRCG
Trigger: TCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGC...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTGGGCAGCGCGGTGGAGCTTGTaGTCCGGAATCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: FRASHGALRSENSQSSWAARWSL*SGIRCG
Trigger: TCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGC...TGCCCAGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp GTCCCACTCCTGTCGGGTAAATCGATGTTTCAGGTCAGCCTCGAGAGCTTCCATTGGGGCGTGTGCGCATaGGCGGTGGAGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VPLLSGKSMFQVSLESFHWGVCA*AVELVL
Trigger: GAGCACAAGCTCCACCGCGCATGCGCACACGCCCCA...ATGGAAGCTCTCGAGGCTGACCTGAAACATCGATTTACCCGACAGGAGTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR GCA 90 bp TGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGTGGGGCGTGTGCGCATaGGCGGTGGAGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: WSPGIMETSELPMVHCGQWGVCA*AVELVL
Trigger: GAGCACAAGCTCCACCGCGCATGCGCACACGCCCCA...CTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR CCA 90 bp GCCCTGGAAGCTGAGGCTCATCTATGCCAAGCAGCAACTTCGGGCACTATCCTTTTCCTTTTCCCCCTGTaGGAGGAGGTCGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALEAEAHLCQAATSGTILFLFPL*EEVAGW
Trigger: CCAGCCCGCGACCTCCTCCCACAGGGGGAAAAGGAA...AAGGATAGTGCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGCTTCCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR CCA 90 bp CACTCAGGACCCCAAGGCAGGCAATGTGAGCCCGCAGTCCTCCGCCTGAGCCCAGGAGCCCAGGAATTATaGAAACTTCAGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HSGPQGRQCEPAVLRLSPGAQEL*KLQSFP
Trigger: TGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCC...TGGGCTCAGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGGGGTCCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR CCA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTCAGGATGTAGCAGCTaGCGGGGGCCTTGGACCACA +
Preference number: 4 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDASGCSS*RGPWTT
Trigger: TGTGGTCCAAGGCCCCCGCCAGCTGCTACATCCTGA...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTTCGGGTAGTAGAGCTGAACGAGCATAGGCATCAGAGCGACTATGGTCTCCCAGTTTCCTCCTGGTCCTaGGCAGGGCCAACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRVVELNEHRHQSDYGLPVSSWS*AGPTWR
Trigger: CCTCCAGGTTGGCCCTGCTCAGGACCAGGAGGAAAC...TGGGAGACCATAGTCGCTCTGATGCCTATGCTCGTTCAGCTCTACTACCCGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR TCA 90 bp TCAGCACATGAAGTCTTCGTCTCTCCACGGCCGCCTTTTCTTCTTTCTGGAGCCCATTGCACTCCAGTCTaGGCCTGGGTCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SAHEVFVSPRPPFLLSGAHCTPV*AWVWGV
Trigger: CACGCCCCAGACCCAGGCTCAGACTGGAGTGCAATG...GGCTCCAGAAAGAAGAAAAGGCGGCCGTGGAGAGACGAAGACTTCATGTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR GCA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGTCCGCGGGTGAAGACTaGGGGGATCCTCGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRSAGED*GDPRCQ
Trigger: TTGGCACCGAGGATCCCCGCAGTCTTCACCCGCGGA...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTGGTGGGTCTGGGGCGTGTaGGCATGCGCGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NFRASHGALRSENSQSSWWVWGV*ACAVEL
Trigger: AAGCTCCACCGCGCATGCGCACACGCCCCAGACCCA...CCAGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR CCA 90 bp AGTGGATCCAGAGACCCCTGCGAGGTACGTGACGGCATCCAACAGGCCCTGTTCCAGCACAGCAACAACTaGGGCCTCATCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: SGSRDPCEVRDGIQQALFQHSNN*GLISLN
Trigger: ATTGAGGCTGATGAGGCCCCAGTTGTTGCTGTGCTG...GAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR CCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCATCAGAGCGACTATaGTCTCCCACCTACCCGGCC +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDASERL*SPTYPA
Trigger: GGCCGGGTAGGTGGGAGACCATAGTCGCTCTGATGC...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR TCA 90 bp AGTGGATCCAGAGACCCCTGCGAGGTACGTGACGGCATCCAACAGGCCCTGTTCAGAGCTTTCAGCACATaGAGTCTTCGTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: SGSRDPCEVRDGIQQALFRAFST*SLRLST
Trigger: CGTGGAGAGACGAAGACTTCATGTGCTGAAAGCTCT...GAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR TCA 90 bp CTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCAGCCCCTGCGAGGTACGTaGCGGCATCCAACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LDIGHDASDCQTLMLQLQPLRGT*RHPTGP
Trigger: AGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGG...CTGGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTGCCCCTGCGAGGTACGTaGCGGCATCCAACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KLQSFPWCTAVRKFSVLLPLRGT*RHPTGP
Trigger: AGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGG...CAGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR TCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTCCCCTGCGAGGTACGTaGCGGCATCCAACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSPLRGT*RHPTGP
Trigger: AGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGG...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCGTGAACTCAAGGCCATaGAGCGTGTGGCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SRGTCRTNFTTFSSLDAFVNSRP*SVWLKG
Trigger: TCCCTTCAGCCACACGCTTCATGGCCTTGAGTTCAC...GAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGGTGAACTCAAGGCCATaGAGCGTGTGGCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GSPEGPAGQISPPSAPWTVNSRP*SVWLKG
Trigger: TCCCTTCAGCCACACGCTTCATGGCCTTGAGTTCAC...CGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTAGCTGGTCACTGGTaGTTGGCCCTGTTAGGACAG +
Preference number: 4 (lower is better)
Translates to: DLPRDLQDKFHHLQLLGRLAGHW*LALLGQ
Trigger: CTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAG...GCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTAGCTGGTCACTGGTaGTTGGCCCTGTTAGGACAG +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQLAGHW*LALLGQ
Trigger: CTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAG...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTTGCTCCGGAATCCGGTaGGGAGGCTTGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSCSGIR*GGLGSL
Trigger: CAGGGAGCCCAAGCCTCCGCACCGGATTCCGGAGCA...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp GAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTGCGCGGTGGAGCTTGTaGTCCGGAATCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: ETSELPMVHCGQKILSPPARWSL*SGIRCG
Trigger: TCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGC...AGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACTGGGGCGTGTGCGCATaGGCGGTGGAGCTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDWGVCA*AVELVL
Trigger: GAGCACAAGCTCCACCGCGCATGCGCACACGCCCCA...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp GAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTTGGGTCTGGGGCGTGTaGGCATGCGCGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ETSELPMVHCGQKILSPPWVWGV*ACAVEL
Trigger: AAGCTCCACCGCGCATGCGCACACGCCCCAGACCCA...AGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGGTGCTCTTGCCTCCTaGCAGGAAGGTTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDGALAS*QEGCRS
Trigger: TGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACC...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp GATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCGGAGGTGCTTCCGGCTaGTCATTATCTTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: DLPRDLQDKFHHLQLLGRGGASG*SLSCPG
Trigger: TCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCC...GCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCGGAGGTGCTTCCGGCTaGTCATTATCTTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFGGASG*SLSCPG
Trigger: TCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCC...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCGGAGGTGCTTCCGGCTaGTCATTATCTTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDAGGASG*SLSCPG
Trigger: TCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCC...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGTCCACCAGGTGGAGGTaGTTCCGGCTGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQSTRWR*FRLLII
Trigger: GATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGA...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCCACCAGGTGGAGGTaGTTCCGGCTGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSSTRWR*FRLLII
Trigger: GATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGA...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTGCTGAGGCTCATCTATaGCAAGCAGCAACTTCGGGC +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPAEAHL*QAATSG
Trigger: GCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGC...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCGCTGAGGCTCATCTATaGCAAGCAGCAACTTCGGGC +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFAEAHL*QAATSG
Trigger: GCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGC...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTGGGCATGTGCGCATGCGCGGTaGAGCTTGTGCTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: FRASHGALRSENSQSSWACAHAR*SLCSGI
Trigger: GATTCCGGAGCACAAGCTCCACCGCGCATGCGCACA...TGCCCAGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR CCA 90 bp GGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGAGGCCCACAGTGCCCTaGAAGCTGAGGCTCATCTAT +
Preference number: 4 (lower is better)
Translates to: GSPEGPAGQISPPSAPWTRPTVP*KLRLIY
Trigger: ATAGATGAGCCTCAGCTTCCAGGGCACTGTGGGCCT...CGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTAGGCCCACAGTGCCCTaGAAGCTGAGGCTCATCTAT +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPRPTVP*KLRLIY
Trigger: ATAGATGAGCCTCAGCTTCCAGGGCACTGTGGGCCT...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGTTTCCTCCTGGTCCTaGGCAGGGCCAACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDVSSWS*AGPTWR
Trigger: CCTCCAGGTTGGCCCTGCTCAGGACCAGGAGGAAAC...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCCCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVPQSSA*AQHSNN
Trigger: GTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGG...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGTTGTACAGGAAGTTGTaGGTGGTCCCCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GSPEGPAGQISPPSAPWTLYRKL*VVPHSH
Trigger: GTGGGAATGGGGGACCACTCACAACTTCCTGTACAA...CGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCTTAGGACAGCCAAGGTaGACTCAAGGCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFLGQPR*TQGHEA
Trigger: CGCTTCATGGCCTTGAGTTCACCTTGGCTGTCCTAA...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CATCTATGCCAAGCAGCAACTTCGGGCACTATCCTTCGGGTAGTAGAGCTGAACGGATCCAGAGACCCCTaGGAGGTACGTGACGGCATC +
Preference number: 4 (lower is better)
Translates to: HLCQAATSGTILRVVELNGSRDP*EVRDGI
Trigger: GATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCC...GTTCAGCTCTACTACCCGAAGGATAGTGCCCGAAGTTGCTGCTTGGCATAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR CCA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCCAGCACAGCAACAACTaGGGCCTCATCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDAQHSNN*GLISLN
Trigger: ATTGAGGCTGATGAGGCCCCAGTTGTTGCTGTGCTG...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTCAGCACAGCAACAACTaGGGCCTCATCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSQHSNN*GLISLN
Trigger: ATTGAGGCTGATGAGGCCCCAGTTGTTGCTGTGCTG...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGCTCGAACCAGGTCTCTaGTGCTCTTGCCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRLEPGL*CSCLLP
Trigger: TGGCAGGAGGCAAGAGCACCAGAGACCTGGTTCGAG...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CATCTATGCCAAGCAGCAACTTCGGGCACTATCCTTCGGGTAGTAGAGCTGAACTCAGGATGTAGCAGCTaGCGGGGGCCTTGGACCACA +
Preference number: 4 (lower is better)
Translates to: HLCQAATSGTILRVVELNSGCSS*RGPWTT
Trigger: TGTGGTCCAAGGCCCCCGCCAGCTGCTACATCCTGA...GTTCAGCTCTACTACCCGAAGGATAGTGCCCGAAGTTGCTGCTTGGCATAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR CCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACAGGCCCACAGTGCCCTaGAAGCTGAGGCTCATCTAT +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDRPTVP*KLRLIY
Trigger: ATAGATGAGCCTCAGCTTCCAGGGCACTGTGGGCCT...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGCCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAAC +
Preference number: 4 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLPQSSA*AQHSNN
Trigger: GTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGG...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AACTGGAATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGGAGAAGCCAGCGTGGTaGGGGGTGAACTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: NWNVWRAASIWVIIGPMEEKPAW*GVNSNQ
Trigger: CTGGTTCGAGTTCACCCCTCACCACGCTGGCTTCTC...CTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR TCA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGAGAAGCCAGCGTGGTaGGGGGTGAACTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKEKPAW*GVNSNQ
Trigger: CTGGTTCGAGTTCACCCCTCACCACGCTGGCTTCTC...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTAGGATGTTCCCCTTGTaGACTTTCTTGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSRMFPL*TFLQPQ
Trigger: CTGAGGCTGCAAGAAAGTTCACAAGGGGAACATCCT...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGTGCTCCGGAATCCGGTaGGGAGGCTTGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLCSGIR*GGLGSL
Trigger: CAGGGAGCCCAAGCCTCCGCACCGGATTCCGGAGCA...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTGCTCCGGAATCCGGTaGGGAGGCTTGGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCCSGIR*GGLGSL
Trigger: CAGGGAGCCCAAGCCTCCGCACCGGATTCCGGAGCA...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCGCGCGGTGGAGCTTGTaGTCCGGAATCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCARWSL*SGIRCG
Trigger: TCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGC...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTGGATCCAGAGACCCCTaGGAGGTACGTGACGGCATC +
Preference number: 4 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSGSRDP*EVRDGI
Trigger: GATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCC...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGGCTGAGGCTCATCTATaGCAAGCAGCAACTTCGGGC +
Preference number: 4 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRAEAHL*QAATSG
Trigger: GCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGC...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGATTGTCAGACACTCATaGTCCAGCTCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQIVRHS*SSSRIS
Trigger: GGAGATCCTGGAGCTGGAGCATGAGTGTCTGACAAT...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCGAGGAGGTCGCGGGCTaGAGGTGTTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLEEVAG*RCFLLV
Trigger: GACCAGGAGGAAACACCTCCAGCCCGCGACCTCCTC...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGTGTGCGCATGCGCGGTaGAGCTTGTGCTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKCAHAR*SLCSGI
Trigger: GATTCCGGAGCACAAGCTCCACCGCGCATGCGCACA...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTCTTCAGAGCTTCCCATaGTGCACTGCGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPLQSFP*CTAVRK
Trigger: TTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAG...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR CCA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTAAGATATTGCCCAAGTaGATCCAGAGACCCCTGCGA +
Preference number: 4 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSKILPK*IQRPLR
Trigger: TCGCAGGGGTCTCTGGATCCACTTGGGCAATATCTT...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGTCAGACCTCGCTGCTTaGATGGTTTTCTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQSDLAA*MVFCRL
Trigger: GAGCCTACAGAAAACCATCCAAGCAGCGAGGTCTGA...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGTTCCGAAGTGGGTTATaGAAACAAAGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQFRSGL*KQRPPV
Trigger: CACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAA...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCCGAAGTGGGTTATaGAAACAAAGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDAFRSGL*KQRPPV
Trigger: CACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAA...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTACAGGAAGTTGTGAGTaGTCCCCCATTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSTGSCE*SPIPTL
Trigger: CAAAGTGGGAATGGGGGACCACTCACAACTTCCTGT...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCTTGTAGGCCCTGCTTaGTTGCTCCAGCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GSPEGPAGQISPPSAPWTLVGPA*LLQLFQ
Trigger: CTGAAAAAGCTGGAGCAACCAAGCAGGGCCTACAAG...CGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCCAAGGCAGGCAATGTaGGCCCGCAGTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SHKGAVEGIGLNYHIHSGPRQAM*ARSPPP
Trigger: AGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGG...GCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCACCCCTGCGAGGTACGTaGCGGCATCCAACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSPLRGT*RHPTGP
Trigger: AGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGG...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCGAGAAGCCAGCGTGGTaGGGGGTGAACTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVEKPAW*GVNSNQ
Trigger: CTGGTTCGAGTTCACCCCTCACCACGCTGGCTTCTC...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAAAGGAGAGGATGAGGTaGACCTCCCGCGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSKERMR*TSRVGG
Trigger: GCCCCCGACGCGGGAGGTTCACCTCATCCTCTCCTT...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCAGTCGAAGGAGAGGATaGGGTGAACCTCCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: IWTLDMMLLIVRHSCSSSSRRRG*GEPPAS
Trigger: CGACGCGGGAGGTTCACCTCATCCTCTCCTTCGACT...GGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGGTGTCAGCAAGCTTaGATGTGTCGTATGTGTCAC +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFRCQQA*MCRMCH
Trigger: GTGACACATACGACACATTCAAGCTTGCTGACACCT...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TTCTTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGCAGCGTGGTGAGGGGTaGACTCGAACCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLNLLPKWVMETKAPSAEQRGEG*TRTRSQ
Trigger: CTGAGACCTGGTTCGAGTTCACCCCTCACCACGCTG...CTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR TCA 90 bp TCTGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCTCTGGGCAACAAGAGTaGAACTCTGAGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SGAQELWKLQSFPWCTAVSGQQE*NSEPGS
Trigger: AGACCCAGGCTCAGAGTTTCACTCTTGTTGCCCAGA...GACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598488.1
CDS-3UTR TCA 90 bp GGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCGGGAGGAGAATCACTTaGACTCAGGAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GNFRASHGALRSENSQSSGRRIT*TQEVEV
Trigger: CACCTCCACCTCCTGAGTTCAAGTGATTCTCCTCCC...GGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACTGCGGGGATCCTCGGTaGCAAAGCTTCTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDCGDPR*QSFCGP
Trigger: AGGACCACAGAAGCTTTGGCACCGAGGATCCCCGCA...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGTGCGGGGATCCTCGGTaGCAAAGCTTCTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKCGDPR*QSFCGP
Trigger: AGGACCACAGAAGCTTTGGCACCGAGGATCCCCGCA...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACTCCTGCCAGGAAGGTTaGAGGTCATTGTCAATGGCT +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDSCQEG*RSLSMA
Trigger: AGCCATTGACAATGACCTGCAACCTTCCTGGCAGGA...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AACTGGAATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGGGTGCTCTTGCCTCCTaGCAGGAAGGTTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NWNVWRAASIWVIIGPMEGALAS*QEGCRS
Trigger: TGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACC...CTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR GCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTCCTTGTGAACTTTCTTaGAGCCTCAGTAATCGGGCA +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPPCELS*SLSNRA
Trigger: TGCCCGATTACTGAGGCTGCAAGAAAGTTCACAAGG...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGTCATGGGGCTGCTCCTaGTTTTCCAGGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKSWGCS*FSREVL
Trigger: CAGGACCTCCCTGGAAAAGCAGGAGCAGCCCCATGA...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACATTGTCAGACACTCATaGTCCAGCTCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDIVRHS*SSSRIS
Trigger: GGAGATCCTGGAGCTGGAGCATGAGTGTCTGACAAT...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCAGCTAACCTGGTGCTCTTaGCTCCTGCCAGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: ICFRSGLWKQRPPVQRSQLTWCS*LLPGRL
Trigger: CAACCTTCCTGGCAGGAGGCAAGAGCACCAGGTTAG...CTGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CCA 90 bp GTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTAGAAGTGCAGTCTTCCTTTTCCCCCTGTaGGAGGAGGTCGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLTSTELTCAELLARSAVFLFPL*EEVAGW
Trigger: CCAGCCCGCGACCTCCTCCCACAGGGGGAAAAGGAA...GACTGCACTTCTAGCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCGTGCCAAAGCTTCTGTaGTCCTCCTGCTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFVPKLL*SSCFPF
Trigger: AAAAGGAAAGCAGGAGGACCACAGAAGCTTTGGCAC...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTGTGCCAAAGCTTCTGTaGTCCTCCTGCTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPVPKLL*SSCFPF
Trigger: AAAAGGAAAGCAGGAGGACCACAGAAGCTTTGGCAC...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACAAGATATTGCCCAAGTaGATCCAGAGACCCCTGCGA +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDKILPK*IQRPLR
Trigger: TCGCAGGGGTCTCTGGATCCACTTGGGCAATATCTT...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCCGGGCTTCTTCATATTaGACAAATGAGACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFRASSY*TNETPA
Trigger: TGCCGGAGTCTCATTTGTCCAATATGAAGAAGCCCG...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTCGGGCTTCTTCATATTaGACAAATGAGACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPRASSY*TNETPA
Trigger: TGCCGGAGTCTCATTTGTCCAATATGAAGAAGCCCG...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACTTTCCAGGGAGGTCCTaGTCCAATTCTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDFPGRS*SNSRAS
Trigger: AGATGCTCGAGAATTGGACCAGGACCTCCCTGGAAA...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GCCCTGGAAGCTGAGGCTCATCTATGCCAAGCAGCAACTTCGGGCACTATCCTTTCAGCCTCTTCTACTTaGGGAAAGGGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ALEAEAHLCQAATSGTILSASST*GKGILW
Trigger: CCACAAGATCCCCTTTCCCCAAGTAGAAGAGGCTGA...AAGGATAGTGCCCGAAGTTGCTGCTTGGCATAGATGAGCCTCAGCTTCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR CCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCTCAGGATGTAGCAGCTaGCGGGGGCCTTGGACCACA +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVSGCSS*RGPWTT
Trigger: TGTGGTCCAAGGCCCCCGCCAGCTGCTACATCCTGA...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATCGGAATCTCCGCGGGTaGAGACTGCGGGGATCCTCG +
Preference number: 4 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHRNLRG*RLRGSS
Trigger: CGAGGATCCCCGCAGTCTTCACCCGCGGAGATTCCG...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCAATTCTCAGTCCTCCTaGGCCTGGGTCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCNSQSS*AWVWGV
Trigger: CACGCCCCAGACCCAGGCTCAGGAGGACTGAGAATT...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTTCGGGTAGTAGAGCTGAACGAGCATAGGCATCAGAGCGACTATGGTCTCCCACCAGTCTTCCCTTCTTaGATTTGCTTCCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRVVELNEHRHQSDYGLPPVFPS*ICFRSG
Trigger: CCCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGG...TGGGAGACCATAGTCGCTCTGATGCCTATGCTCGTTCAGCTCTACTACCCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR TCA 90 bp CTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATAAGGAGAGGATGAGGTaGACCTCCCGCGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LNYHIHSGHLDIGHDASDKERMR*TSRVGG
Trigger: GCCCCCGACGCGGGAGGTTCACCTCATCCTCTCCTT...ATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGAAGGAGAGGATGAGGTaGACCTCCCGCGTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: YHIHSGHLDIGHDASDCQKERMR*TSRVGG
Trigger: GCCCCCGACGCGGGAGGTTCACCTCATCCTCTCCTT...CTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCCACAGGCATCTATGTTaGACAGGGGAAAATGCATCA +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFHRHLC*TGENAS
Trigger: TGATGCATTTTCCCCTGTTCAACATAGATGCCTGTG...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACCTAGCTGGTCACTGGTaGTTGGCCCTGTTAGGACAG +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDLAGHW*LALLGQ
Trigger: CTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAG...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CAGGCCCACAGTGCCCTGGAAGCTGAGGCTCATCTATGCCAAGCAGCAACTTCGACGCCTTCTTCTGAATaGCGCTATCAAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: QAHSALEAEAHLCQAATSTPSSE*RYQNHS
Trigger: ACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGT...CGAAGTTGCTGCTTGGCATAGATGAGCCTCAGCTTCCAGGGCACTGTGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR TCA 90 bp TATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCACAAGAGTGAAACTCTaGGCCTGGGTCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: YGNFRASHGALRSENSQSTRVKL*AWVWGV
Trigger: CACGCCCCAGACCCAGGCTCAGAGTTTCACTCTTGT...GGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598488.1
CDS-3UTR TCA 90 bp GAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCTGGGAGGAGAATCACTTaGACTCAGGAGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ETSELPMVHCGQKILSPPGRRIT*TQEVEV
Trigger: CACCTCCACCTCCTGAGTTCAAGTGATTCTCCTCCC...AGGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp CTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGGGTCTGGGGCGTGTaGGCATGCGCGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LNYHIHSGHLDIGHDASDWVWGV*ACAVEL
Trigger: AAGCTCCACCGCGCATGCGCACACGCCCCAGACCCA...ATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGCAGAGCTTCCCATGGTaGACTGCGGTCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRQSFPW*TAVRKF
Trigger: GAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTG...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR GCA 90 bp TCCAGAGACCCCTGCGAGGTACGTGACGGCATCCAACAGGCCCTGTTCTTTCATGTAGAGAGAAGATATTaGCCAAGTGGATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SRDPCEVRDGIQQALFFHVERRY*PSGSRD
Trigger: GTCTCTGGATCCACTTGGGCAATATCTTCTCTCTAC...ATGAAAGAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR GCA 90 bp GATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCGTAGAGAGAAGATATTaGCCAAGTGGATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: DLPRDLQDKFHHLQLLGRVERRY*PSGSRD
Trigger: GTCTCTGGATCCACTTGGGCAATATCTTCTCTCTAC...GCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TGGAATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGTGCACTCTAACCTGGTaGTCTTGCCTCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WNVWRAASIWVIIGPMEKCTLTW*SCLLPG
Trigger: TCCTGGCAGGAGGCAAGAGCACCAGGTTAGAGTGCA...CTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAGAGGAGGTCGCGGGCTaGAGGTGTTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSEEVAG*RCFLLV
Trigger: GACCAGGAGGAAACACCTCCAGCCCGCGACCTCCTC...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTAGAAGTGCAGTCTGTGCGCATGCGCGGTaGAGCTTGTGCTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: VLTSTELTCAELLARSAVCAHAR*SLCSGI
Trigger: GATTCCGGAGCACAAGCTCCACCGCGCATGCGCACA...GACTGCACTTCTAGCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAAAGATATTGCCCAAGTaGATCCAGAGACCCCTGCGA +
Preference number: 4 (lower is better)
Translates to: LEPRNYGNFRASHGALRSKILPK*IQRPLR
Trigger: TCGCAGGGGTCTCTGGATCCACTTGGGCAATATCTT...TGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR CCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTGCAGGTCATTGTCAATaGCTGCAAATATTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPAGHCQ*LQILGR
Trigger: CCTACCCAATATTTGCAGCCATTGACAATGACCTGC...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCTCGAACCAGGTCTCTaGTGCTCTTGCCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLLEPGL*CSCLLP
Trigger: TGGCAGGAGGCAAGAGCACCAGAGACCTGGTTCGAG...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCCCAGCATCCACCAGGTaGAGGTGCTTCCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLPASTR*RCFRLL
Trigger: GAGCAGCCGGAAGCACCTCCACCTGGTGGATGCTGG...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTCAGCGTGGTGAGGGGTaGACTCGAACCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLNYHIHSGHLDIGHDASQRGEG*TRTRSL
Trigger: CAGAGACCTGGTTCGAGTTCACCCCTCACCACGCTG...AGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAGAGAAGCCAGCGTGGTaGGGGGTGAACTCGAACCAG +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSEKPAW*GVNSNQ
Trigger: CTGGTTCGAGTTCACCCCTCACCACGCTGGCTTCTC...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGAGGTGTCAGCAAGCTTaGATGTGTCGTATGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRRCQQA*MCRMCH
Trigger: GTGACACATACGACACATTCAAGCTTGCTGACACCT...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGTTAGGACAGCCAAGGTaGACTCAAGGCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKLGQPR*TQGHEA
Trigger: CGCTTCATGGCCTTGAGTTCACCTTGGCTGTCCTAA...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTGGAAGGCATTGGTCTaGACTATCACATTCATTCTG +
Preference number: 4 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSWKALV*TITFIL
Trigger: CAGAATGAATGTGATAGTTCAGACCAATGCCTTCCA...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGTGGAAGGCATTGGTCTaGACTATCACATTCATTCTG +
Preference number: 4 (lower is better)
Translates to: GSPEGPAGQISPPSAPWTWKALV*TITFIL
Trigger: CAGAATGAATGTGATAGTTCAGACCAATGCCTTCCA...CGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGTGGAAGGCATTGGTCTaGACTATCACATTCATTCTG +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQWKALV*TITFIL
Trigger: CAGAATGAATGTGATAGTTCAGACCAATGCCTTCCA...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TTCTTTCTGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCACTGAGGTGGAGGTGCCAGTaGGCAGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: FFLEPRNYGNFRASHGALRWRCQ*AEIMPL
Trigger: CAATGGCATGATCTCTGCTCACTGGCACCTCCACCT...CAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCAGAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp GGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCCCAGAGCTTCCCATGGTaGACTGCGGTCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: GNFRASHGALRSENSQSSQSFPW*TAVRKF
Trigger: GAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTG...GGAGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCGAACCAGGTCTCTGGTaGTCTTGCCTCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCEPGLW*SCLLPG
Trigger: TCCTGGCAGGAGGCAAGAGCACCAGAGACCTGGTTC...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCGGGTCCTCATGGGGCTaGTCCTGCTTTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SHKGAVEGIGLNYHIHSGGSSWG*SCFSRE
Trigger: CTCCCTGGAAAAGCAGGAGCAGCCCCATGAGGACCC...GCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCGGGTCCTCATGGGGCTaGTCCTGCTTTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLGSSWG*SCFSRE
Trigger: CTCCCTGGAAAAGCAGGAGCAGCCCCATGAGGACCC...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCTCCACCAGGTGGAGGTaGTTCCGGCTGCTCATTATC +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVSTRWR*FRLLII
Trigger: GATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGA...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGGCCTTTTCTTCTTTCTaGAGCCCAGGAATTATGGAA +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQAFSSF*SPGIME
Trigger: TTCCATAATTCCTGGGCTCCAGAAAGAAGAAAAGGC...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR CCA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATCCAGCATCCACCAGGTaGAGGTGCTTCCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHPASTR*RCFRLL
Trigger: GAGCAGCCGGAAGCACCTCCACCTGGTGGATGCTGG...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGAAAATGCATCACCACTaGTCCAGTTTCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LQLQDLPRDLQDKFHHLQKMHHH*SSFSFQ
Trigger: CTGAAAGGAGAAACTGGACCAGTGGTGATGCATTTT...CTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTAAAATGCATCACCACTaGTCCAGTTTCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPKMHHH*SSFSFQ
Trigger: CTGAAAGGAGAAACTGGACCAGTGGTGATGCATTTT...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TGCTCCAGCTCCAGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCCTATCACATTCATTCTaGCCATCTGGACATTGGACA +
Preference number: 4 (lower is better)
Translates to: CSSSRISRGTCRTNFTTFLSHSF*PSGHWT
Trigger: TGTCCAATGTCCAGATGGCCAGAATGAATGTGATAG...GAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCTGGAGCTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTATCACATTCATTCTaGCCATCTGGACATTGGACA +
Preference number: 4 (lower is better)
Translates to: DLPRDLQDKFHHLQLLGRLSHSF*PSGHWT
Trigger: TGTCCAATGTCCAGATGGCCAGAATGAATGTGATAG...GCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCGTGGGAAGGGAGTGTTaGTGGCTAAACCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLVGREC*WLNQHP
Trigger: TGGATGCTGGTTTAGCCATCAACACTCCCTTCCCAC...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGAGTCGAAGGAGAGGATaGGGTGAACCTCCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: YHIHSGHLDIGHDASDCQSRRRG*GEPPAS
Trigger: CGACGCGGGAGGTTCACCTCATCCTCTCCTTCGACT...CTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTAGAAGTGCAGTCGTGAACTCAAGGCCATaGAGCGTGTGGCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: VLTSTELTCAELLARSAVVNSRP*SVWLKG
Trigger: TCCCTTCAGCCACACGCTTCATGGCCTTGAGTTCAC...GACTGCACTTCTAGCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTGCGGGGATCCTCGGTaGCAAAGCTTCTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHCGDPR*QSFCGP
Trigger: AGGACCACAGAAGCTTTGGCACCGAGGATCCCCGCA...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCTTTCTGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCACTGCCAGAGCTTCCCATGGTaGACTGCGGTCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: SFWSPGIMETSELPMVHCQSFPW*TAVRKF
Trigger: GAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTG...GCAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR GCA 90 bp TGGAATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGTCCTGCCAGGAAGGTTaGAGGTCATTGTCAATGGCT +
Preference number: 4 (lower is better)
Translates to: WNVWRAASIWVIIGPMEKSCQEG*RSLSMA
Trigger: AGCCATTGACAATGACCTGCAACCTTCCTGGCAGGA...CTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR GCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACTCCTGCCAGGAAGGTTaGAGGTCATTGTCAATGGCT +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDSCQEG*RSLSMA
Trigger: AGCCATTGACAATGACCTGCAACCTTCCTGGCAGGA...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACGGTGCTCTTGCCTCCTaGCAGGAAGGTTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHGALAS*QEGCRS
Trigger: TGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACC...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGGGGCTGCTCCTaGTTTTCCAGGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHSWGCS*FSREVL
Trigger: CAGGACCTCCCTGGAAAAGCAGGAGCAGCCCCATGA...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGAGGGTCCTCATGGGGCTaGTCCTGCTTTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ITFILAIWTLDMMLLIVRGSSWG*SCFSRE
Trigger: CTCCCTGGAAAAGCAGGAGCAGCCCCATGAGGACCC...TCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGATGTGCGCATGCGCGGTaGAGCTTGTGCTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: ITFILAIWTLDMMLLIVRCAHAR*SLCSGI
Trigger: GATTCCGGAGCACAAGCTCCACCGCGCATGCGCACA...TCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GAGCTTTCAGCACATGAAGTCTTCGTCTCTCCACGGCCGCCTTTTCTTCTTTCTCTTCAGAGCTTCCCATaGTGCACTGCGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ELSAHEVFVSPRPPFLLSLQSFP*CTAVRK
Trigger: TTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAG...AGAAAGAAGAAAAGGCGGCCGTGGAGAGACGAAGACTTCATGTGCTGAAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR CCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACTCAGACCTCGCTGCTTaGATGGTTTTCTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDSDLAA*MVFCRL
Trigger: GAGCCTACAGAAAACCATCCAAGCAGCGAGGTCTGA...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTACAGGAAGTTGTGAGTaGTCCCCCATTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSTGSCE*SPIPTL
Trigger: CAAAGTGGGAATGGGGGACCACTCACAACTTCCTGT...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATAGCTGGCGGGGGCCTTaGACCACAAATCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHSWRGP*TTNPAQ
Trigger: CTGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCT...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATAGCTGGCGGGGGCCTTaGACCACAAATCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LNYHIHSGHLDIGHDASDSWRGP*TTNPAQ
Trigger: CTGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCT...ATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACAGCAGTGGAAGGCATTaGTCTGAACTATCACATTCA +
Preference number: 4 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDSSGRH*SELSHS
Trigger: TGAATGTGATAGTTCAGACCAATGCCTTCCACTGCT...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGGAACATTGCACTCTAACCTaGTGCTCTTGCCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NVWRAASIWVIIGPMEKEHCTLT*CSCLLP
Trigger: TGGCAGGAGGCAAGAGCACCAGGTTAGAGTGCAATG...TTCCTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CCA 90 bp CTTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAACTAAAAAGTGAGAGATaGCCGGGTGCGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LEFASEVGYGNKGPQCRELKSER*PGAVAH
Trigger: ATGAGCCACCGCACCCGGCCATCTCTCACTTTTTAG...TTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR TCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCAGAGCTTTCAGCACATaGAGTCTTCGTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVRAFST*SLRLST
Trigger: CGTGGAGAGACGAAGACTTCATGTGCTGAAAGCTCT...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TTCTTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGCCAGTCTTCCCTTCTTaGATTTGCTTCCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLNLLPKWVMETKAPSAEPVFPS*ICFRSG
Trigger: CCCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGG...CTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR TCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCAGGATGTTCCCCTTGTaGACTTTCTTGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVRMFPL*TFLQPQ
Trigger: CTGAGGCTGCAAGAAAGTTCACAAGGGGAACATCCT...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGTTGTACAGGAAGTTGTaGGTGGTCCCCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLLYRKL*VVPHSH
Trigger: GTGGGAATGGGGGACCACTCACAACTTCCTGTACAA...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCGTGGGAAGGGAGTGTTaGTGGCTAAACCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCVGREC*WLNQHP
Trigger: TGGATGCTGGTTTAGCCATCAACACTCCCTTCCCAC...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGGAAAAGACATCTAAAAAGTaGGAGATGGCCGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: NVWRAASIWVIIGPMEKEKTSKK*EMAGCG
Trigger: ACCGCACCCGGCCATCTCTCACTTTTTAGATGTCTT...TTCCTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR GCA 90 bp ATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCCAGAGCTTCCCATGGTaGACTGCGGTCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: IWTLDMMLLIVRHSCSSSQSFPW*TAVRKF
Trigger: GAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTG...GGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR GCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGATCCAGAGACCCCTaGGAGGTACGTGACGGCATC +
Preference number: 4 (lower is better)
Translates to: HDLSPSSYFYRANLCRATGSRDP*EVRDGI
Trigger: GATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCC...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTGAACCAGGTCTCTGGTaGTCTTGCCTCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IGLNYHIHSGHLDIGHDAEPGLW*SCLLPG
Trigger: TCCTGGCAGGAGGCAAGAGCACCAGAGACCTGGTTC...AGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTCATGGGGCTGCTCCTaGTTTTCCAGGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LNYHIHSGHLDIGHDASDSWGCS*FSREVL
Trigger: CAGGACCTCCCTGGAAAAGCAGGAGCAGCCCCATGA...ATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCATTGTCAGACACTCATaGTCCAGCTCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLIVRHS*SSSRIS
Trigger: GGAGATCCTGGAGCTGGAGCATGAGTGTCTGACAAT...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCAGGAATGTCTGGAGAGCTaGCAGCATTTGGGTGATAAT +
Preference number: 4 (lower is better)
Translates to: ICFRSGLWKQRPPVQRSQECLES*QHLGDN
Trigger: ATTATCACCCAAATGCTGGCAGCTCTCCAGACATTC...CTGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR GCA 90 bp ATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTCAGAGATCATGCCATTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: METSELPMVHCGQKILSPQRSCH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAATGGCATGATCTCTG...AGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598488.1
CDS-3UTR CCA 90 bp TATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCCTTCAGAGCTTCCCATaGTGCACTGCGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: YGNFRASHGALRSENSQSLQSFP*CTAVRK
Trigger: TTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAG...GGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR CCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTCGGGCTTCTTCATATTaGACAAATGAGACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSRASSY*TNETPA
Trigger: TGCCGGAGTCTCATTTGTCCAATATGAAGAAGCCCG...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATCTCGAACCAGGTCTCTaGTGCTCTTGCCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LNYHIHSGHLDIGHDASDLEPGL*CSCLLP
Trigger: TGGCAGGAGGCAAGAGCACCAGAGACCTGGTTCGAG...ATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCACCGCCTTCATCTTCTaGGGGAGGATGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SHKGAVEGIGLNYHIHSGTAFIF*GRMFPL
Trigger: CAAGGGGAACATCCTCCCCCAGAAGATGAAGGCGGT...GCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACACCGCCTTCATCTTCTaGGGGAGGATGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHTAFIF*GRMFPL
Trigger: CAAGGGGAACATCCTCCCCCAGAAGATGAAGGCGGT...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAACCGCCTTCATCTTCTaGGGGAGGATGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSTAFIF*GRMFPL
Trigger: CAAGGGGAACATCCTCCCCCAGAAGATGAAGGCGGT...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCTTTCCAGGGAGGTCCTaGTCCAATTCTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVFPGRS*SNSRAS
Trigger: AGATGCTCGAGAATTGGACCAGGACCTCCCTGGAAA...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCTCAGCCTCTTCTACTTaGGGAAAGGGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: IWTLDMMLLIVRHSCSSSSASST*GKGILW
Trigger: CCACAAGATCCCCTTTCCCCAAGTAGAAGAGGCTGA...GGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTAGCTGGCGGGGGCCTTaGACCACAAATCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HDLSPSSYFYRANLCRATSWRGP*TTNPAQ
Trigger: CTGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCT...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCAGCTCAAAAGAGAAACTaGAATGTCTGGAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLLPKWVMETKAPSAEKPAQKRN*NVWRAA
Trigger: GGCAGCTCTCCAGACATTCCAGTTTCTCTTTTGAGC...TGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR TCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTTTCATATTGGACAAATaGGACTCCGGCAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSFILDK*DSGSSL
Trigger: CAGAGAACTGCCGGAGTCTCATTTGTCCAATATGAA...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCAGAATCCATCAAGTTACTaGGTGAGCCTTTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: LDIGHDASDCQTLMLQLQNPSSY*VSLSFR
Trigger: CCGAAAGGAAAGGCTCACTCAGTAACTTGATGGATT...CTGGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTTGTACAGGAAGTTGTaGGTGGTCCCCCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHLYRKL*VVPHSH
Trigger: GTGGGAATGGGGGACCACTCACAACTTCCTGTACAA...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCGTGGGAAGGGAGTGTTaGTGGCTAAACCAGCATCCA +
Preference number: 4 (lower is better)
Translates to: SHKGAVEGIGLNYHIHSGVGREC*WLNQHP
Trigger: TGGATGCTGGTTTAGCCATCAACACTCCCTTCCCAC...GCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCAGCACAGGCATCTATGTTaGACAGGGGAAAATGCATCA +
Preference number: 4 (lower is better)
Translates to: LDIGHDASDCQTLMLQLQHRHLC*TGENAS
Trigger: TGATGCATTTTCCCCTGTTCAACATAGATGCCTGTG...CTGGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTTAGGACAGCCAAGGTaGACTCAAGGCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: DLSPSSYFYRANLCRATGLGQPR*TQGHEA
Trigger: CGCTTCATGGCCTTGAGTTCACCTTGGCTGTCCTAA...GCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGTAGAGAGAAGATATTaGCCAAGTGGATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDVERRY*PSGSRD
Trigger: GTCTCTGGATCCACTTGGGCAATATCTTCTCTCTAC...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGTGCTCTTGCCTCCTaGCAGGAAGGTTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HDLSPSSYFYRANLCRATGALAS*QEGCRS
Trigger: TGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACC...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCCCTTGTGAACTTTCTTaGAGCCTCAGTAATCGGGCA +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVPCELS*SLSNRA
Trigger: TGCCCGATTACTGAGGCTGCAAGAAAGTTCACAAGG...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTATGTGTCACTCCATaGCTCAATATCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKVCVTP*LNITST
Trigger: TGTGGAGGTGATATTGAGGCATGGAGTGACACATAC...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAATCTCCCGAGGGACCTaGAGGACAAATTTCACCACC +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSISRGT*RTNFTT
Trigger: GGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp GGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTTCGGCTTGTAGGCCCTaGTTGGTTGCTCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLNYHIHSGHLDIGHDASSACRP*LVAPAF
Trigger: AAAAGCTGGAGCAACCAAGCAGGGCCTACAAGCCGA...AGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TTTCTTCTTTCTGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCAGTGAGCAGAGATCATaGCATTGCACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLLSGAQELWKLQSFPWCSEQRS*HCTPVW
Trigger: CCAGACTGGAGTGCAATGGCATGATCTCTGCTCACT...GCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCAGAAAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598488.1
CDS-3UTR CCA 90 bp ATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCTGGAGCCCAGGAATTATaGAAACTTCAGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: METSELPMVHCGQKILSPGAQEL*KLQSFP
Trigger: TGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCC...AGGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR CCA 90 bp GGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTCAGCACAGCAACAACTaGGGCCTCATCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLNYHIHSGHLDIGHDASQHSNN*GLISLN
Trigger: ATTGAGGCTGATGAGGCCCCAGTTGTTGCTGTGCTG...AGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGAAGATATTGCCCAAGTaGATCCAGAGACCCCTGCGA +
Preference number: 4 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLKILPK*IQRPLR
Trigger: TCGCAGGGGTCTCTGGATCCACTTGGGCAATATCTT...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AACTGGAATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGGCAGGTCATTGTCAATaGCTGCAAATATTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: NWNVWRAASIWVIIGPMEAGHCQ*LQILGR
Trigger: CCTACCCAATATTTGCAGCCATTGACAATGACCTGC...CTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CCA 90 bp GAAAGTCAGGTCTCTCTCAGGGTGAGTTCTGACCAGTCTTCCCTTCTTGAATTTTTCCGAAGTGGGTTATaGAAACAAAGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ESQVSLRVSSDQSSLLEFFRSGL*KQRPPV
Trigger: CACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAA...AAATTCAAGAAGGGAAGACTGGTCAGAACTCACCCTGAGAGAGACCTGACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CCA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCGTCAGATTCCTTAACTaGTCAAAAATGTATTCCCTA +
Preference number: 4 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDAVRFLN*SKMYSL
Trigger: TAGGGAATACATTTTTGACCAGTTAAGGAATCTGAC...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCACAGGAAGTTGTGAGTaGTCCCCCATTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCTGSCE*SPIPTL
Trigger: CAAAGTGGGAATGGGGGACCACTCACAACTTCCTGT...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGAGAAACTGGAATGTCTaGAGAGCTGCCAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: LNLLPKWVMETKAPSAEKRNWNV*RAASIW
Trigger: CCAAATGCTGGCAGCTCTCCAGACATTCCAGTTTCT...CTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR TCA 90 bp AGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCAGAGCTTTCAGCACATaGAGTCTTCGTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: SHKGAVEGIGLNYHIHSGRAFST*SLRLST
Trigger: CGTGGAGAGACGAAGACTTCATGTGCTGAAAGCTCT...GCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCCCAGTCTTCCCTTCTTaGATTTGCTTCCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLPVFPS*ICFRSG
Trigger: CCCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGG...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCAGGATGTTCCCCTTGTaGACTTTCTTGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SHKGAVEGIGLNYHIHSGRMFPL*TFLQPQ
Trigger: CTGAGGCTGCAAGAAAGTTCACAAGGGGAACATCCT...GCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCAGGTGTCAGCAAGCTTaGATGTGTCGTATGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCRCQQA*MCRMCH
Trigger: GTGACACATACGACACATTCAAGCTTGCTGACACCT...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACTTGGACGCCTTCTTCTaGATGACGCTATCAAAATCA +
Preference number: 4 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDLDAFF*MTLSKS
Trigger: TGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAA...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp TGGAATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGTCAGGACACAGTTGCTaGACAAGTGAGTGCATTTTA +
Preference number: 4 (lower is better)
Translates to: WNVWRAASIWVIIGPMEKSGHSC*TSECIL
Trigger: TAAAATGCACTCACTTGTTCAGCAACTGTGTCCTGA...CTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR GCA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCGTAGAGAGAAGATATTaGCCAAGTGGATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLVERRY*PSGSRD
Trigger: GTCTCTGGATCCACTTGGGCAATATCTTCTCTCTAC...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCGGCTTGTAGGCCCTaGTTGGTTGCTCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHSACRP*LVAPAF
Trigger: AAAAGCTGGAGCAACCAAGCAGGGCCTACAAGCCGA...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCCTTCAGAGCTTCCCATaGTGCACTGCGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLLQSFP*CTAVRK
Trigger: TTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAG...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR CCA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGGAGCCCAGGAATTATaGAAACTTCAGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLGAQEL*KLQSFP
Trigger: TGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCC...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR CCA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCGCAGGTCATTGTCAATaGCTGCAAATATTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVAGHCQ*LQILGR
Trigger: CCTACCCAATATTTGCAGCCATTGACAATGACCTGC...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTTCCGAAGTGGGTTATaGAAACAAAGGCCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DLSPSSYFYRANLCRATGFRSGL*KQRPPV
Trigger: CACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAA...GCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCTTTCCAGGGAGGTCCTaGTCCAATTCTCGAGCATCT +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLFPGRS*SNSRAS
Trigger: AGATGCTCGAGAATTGGACCAGGACCTCCCTGGAAA...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCAGAGCAGTGGAAGGCATTaGTCTGAACTATCACATTCA +
Preference number: 4 (lower is better)
Translates to: LDIGHDASDCQTLMLQLQSSGRH*SELSHS
Trigger: TGAATGTGATAGTTCAGACCAATGCCTTCCACTGCT...CTGGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GAAAGTCAGGTCTCTCTCAGGGTGAGTTCTGACCAGTCTTCCCTTCTTGAATTTAGAGCTGCCAGCATTTaGGTGATAATCGGACCTATG +
Preference number: 4 (lower is better)
Translates to: ESQVSLRVSSDQSSLLEFRAASI*VIIGPM
Trigger: CATAGGTCCGATTATCACCCAAATGCTGGCAGCTCT...AAATTCAAGAAGGGAAGACTGGTCAGAACTCACCCTGAGAGAGACCTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CCA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACCTTGTAGGCCCTGCTTaGTTGCTCCAGCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHLVGPA*LLQLFQ
Trigger: CTGAAAAAGCTGGAGCAACCAAGCAGGGCCTACAAG...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATAGAGCTTTCAGCACATaGAGTCTTCGTCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHRAFST*SLRLST
Trigger: CGTGGAGAGACGAAGACTTCATGTGCTGAAAGCTCT...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp GTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTAGAAGTGCAGTCTTCATATTGGACAAATaGGACTCCGGCAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLTSTELTCAELLARSAVFILDK*DSGSSL
Trigger: CAGAGAACTGCCGGAGTCTCATTTGTCCAATATGAA...GACTGCACTTCTAGCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACCAGTCTTCCCTTCTTaGATTTGCTTCCGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ITFILAIWTLDMMLLIVRPVFPS*ICFRSG
Trigger: CCCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGG...TCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCAATCCATCAAGTTACTaGGTGAGCCTTTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCNPSSY*VSLSFR
Trigger: CCGAAAGGAAAGGCTCACTCAGTAACTTGATGGATT...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCCTGCCAGGAAGGTTaGAGGTCATTGTCAATGGCT +
Preference number: 4 (lower is better)
Translates to: IGLNYHIHSGHLDIGHDASCQEG*RSLSMA
Trigger: AGCCATTGACAATGACCTGCAACCTTCCTGGCAGGA...AGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTTGAACAGGGGAAAATaGATCACCACTGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCLNRGK*ITTGPV
Trigger: AACTGGACCAGTGGTGATGCATTTTCCCCTGTTCAA...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAGTGCCAAAGCTTCTGTaGTCCTCCTGCTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSVPKLL*SSCFPF
Trigger: AAAAGGAAAGCAGGAGGACCACAGAAGCTTTGGCAC...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCGGAGCCCAGGAATTATaGAAACTTCAGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SHKGAVEGIGLNYHIHSGGAQEL*KLQSFP
Trigger: TGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCC...GCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR CCA 90 bp ATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCAGACCTCGCTGCTTaGATGGTTTTCTGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: IGLNYHIHSGHLDIGHDASDLAA*MVFCRL
Trigger: GAGCCTACAGAAAACCATCCAAGCAGCGAGGTCTGA...AGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAAAATCACAGTCTAGCTaGTCACTGGTGATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSKSQSS*SLVIGP
Trigger: AGGGCCAATCACCAGTGACCAGCTAGACTGTGATTT...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCAAATCACAGTCTAGCTaGTCACTGGTGATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLKSQSS*SLVIGP
Trigger: AGGGCCAATCACCAGTGACCAGCTAGACTGTGATTT...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
3UTR CAA 72 bp AAAGAGAAACTGGAATGTCTGGAGAGCTGCCAGCATTaGGGTGATAATCGGACCTATGGAGAAGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: KEKLECLESCQH*GDNRTYGEGRH
Trigger: ATGTCTTCCTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCAGTTTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR TCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCTTCATATTGGACAAATaGGACTCCGGCAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLFILDK*DSGSSL
Trigger: CAGAGAACTGCCGGAGTCTCATTTGTCCAATATGAA...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp ATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCCACAGGCATCTATGTTaGACAGGGGAAAATGCATCA +
Preference number: 4 (lower is better)
Translates to: IHSGHLDIGHDASDCQTLHRHLC*TGENAS
Trigger: TGATGCATTTTCCCCTGTTCAACATAGATGCCTGTG...GAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGTTGGACGCCTTCTTCTaGATGACGCTATCAAAATCA +
Preference number: 4 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLLDAFF*MTLSKS
Trigger: TGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAA...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp GGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTTTGAACAGGGGAAAATaGATCACCACTGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GLNYHIHSGHLDIGHDASLNRGK*ITTGPV
Trigger: AACTGGACCAGTGGTGATGCATTTTCCCCTGTTCAA...AGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACGTATGTGTCACTCCATaGCTCAATATCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHVCVTP*LNITST
Trigger: TGTGGAGGTGATATTGAGGCATGGAGTGACACATAC...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCAAGTGAGTGCATTTTATaGTTAGGAAATAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: NLLPKWVMETKAPSAEKPSECIL*LGNRVR
Trigger: CCTTACCCTATTTCCTAAGCATAAAATGCACTCACT...TGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CCA 90 bp GAGCTTCCATGTCACCATCATTGGTGTAGAGAGAAGATATTGCCCAAGTGGATCGCCTTTTCTTCTTTCTaGAGCCCAGGAATTATGGAA +
Preference number: 4 (lower is better)
Translates to: ELPCHHHWCREKILPKWIAFSSF*SPGIME
Trigger: TTCCATAATTCCTGGGCTCCAGAAAGAAGAAAAGGC...GATCCACTTGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS-3UTR CCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTTCAGCCTCTTCTACTTaGGGAAAGGGGATCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HDLSPSSYFYRANLCRATSASST*GKGILW
Trigger: CCACAAGATCCCCTTTCCCCAAGTAGAAGAGGCTGA...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp CTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATAAATCACAGTCTAGCTaGTCACTGGTGATTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LNYHIHSGHLDIGHDASDKSQSS*SLVIGP
Trigger: AGGGCCAATCACCAGTGACCAGCTAGACTGTGATTT...ATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTAGAAGTGCAGTCAGCAGTGGAAGGCATTaGTCTGAACTATCACATTCA +
Preference number: 4 (lower is better)
Translates to: VLTSTELTCAELLARSAVSSGRH*SELSHS
Trigger: TGAATGTGATAGTTCAGACCAATGCCTTCCACTGCT...GACTGCACTTCTAGCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp GGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTTCTTCTTTCTTCCCATaGTGCACTGCGGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLNYHIHSGHLDIGHDASSSFFP*CTAVRK
Trigger: TTTTCTGACCGCAGTGCACCATGGGAAGAAAGAAGA...AGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599111.5
CDS-3UTR TCA 90 bp GGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTTTGGACGCCTTCTTCTaGATGACGCTATCAAAATCA +
Preference number: 4 (lower is better)
Translates to: GLNYHIHSGHLDIGHDASLDAFF*MTLSKS
Trigger: TGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAA...AGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTCCTTGTGAACTTTCTTaGAGCCTCAGTAATCGGGCA +
Preference number: 4 (lower is better)
Translates to: HDLSPSSYFYRANLCRATPCELS*SLSNRA
Trigger: TGCCCGATTACTGAGGCTGCAAGAAAGTTCACAAGG...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTTGAACAGGGGAAAATaGATCACCACTGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHLNRGK*ITTGPV
Trigger: AACTGGACCAGTGGTGATGCATTTTCCCCTGTTCAA...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp ATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTGTATGTGTCACTCCATaGCTCAATATCACCTCCACA +
Preference number: 4 (lower is better)
Translates to: IGLNYHIHSGHLDIGHDAVCVTP*LNITST
Trigger: TGTGGAGGTGATATTGAGGCATGGAGTGACACATAC...AGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR GCA 90 bp TATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGTCTTTCTTCCCATGGTaGACTGCGGTCAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: YHIHSGHLDIGHDASDCQSFFPW*TAVRKF
Trigger: GAATTTTCTGACCGCAGTGCACCATGGGAAGAAAGA...CTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599111.5
CDS-3UTR CCA 90 bp CTCAGAGCTCCACTTGGCTGTGGAGAGATAGCCCATGATTTAAGCCCAAGTTCTGTCAGATTCCTTAACTaGTCAAAAATGTATTCCCTA +
Preference number: 4 (lower is better)
Translates to: LRAPLGCGEIAHDLSPSSVRFLN*SKMYSL
Trigger: TAGGGAATACATTTTTGACCAGTTAAGGAATCTGAC...AGAACTTGGGCTTAAATCATGGGCTATCTCTCCACAGCCAAGTGGAGCTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCACTATCACATTCATTCTaGCCATCTGGACATTGGACA +
Preference number: 4 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSLSHSF*PSGHWT
Trigger: TGTCCAATGTCCAGATGGCCAGAATGAATGTGATAG...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATACGCCTTCTTCTGAATaGCGCTATCAAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHTPSSE*RYQNHS
Trigger: ACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGT...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp ATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTGCCTTTTCTTCTTTCTaGAGCCCAGGAATTATGGAA +
Preference number: 4 (lower is better)
Translates to: IGLNYHIHSGHLDIGHDAAFSSF*SPGIME
Trigger: TTCCATAATTCCTGGGCTCCAGAAAGAAGAAAAGGC...AGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000599921.6
CDS-3UTR CCA 90 bp TATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGAAAATGCATCACCACTaGTCCAGTTTCTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: YHIHSGHLDIGHDASDCQKMHHH*SSFSFQ
Trigger: CTGAAAGGAGAAACTGGACCAGTGGTGATGCATTTT...CTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR TCA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTACGCCTTCTTCTGAATaGCGCTATCAAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: HDLSPSSYFYRANLCRATTPSSE*RYQNHS
Trigger: ACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGT...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CCA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGTCAGATTCCTTAACTaGTCAAAAATGTATTCCCTA +
Preference number: 4 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLVRFLN*SKMYSL
Trigger: TAGGGAATACATTTTTGACCAGTTAAGGAATCTGAC...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS GCA 90 bp CCTGAGCCTGGGTCTGGGGCGTGTGCGCATGCGCGGTGGAGCTTGTaGTCCGGAATCCGGTGCGGAGGCTTGGGCTCCCTGCGCTTAGCG +
Preference number: 5 (lower is better)
Translates to: PEPGSGACAHARWSL*SGIRCGGLGSLRLA
Trigger: CGCTAAGCGCAGGGAGCCCAAGCCTCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGCATGCGCACACGCCCCAGACCCAGGCTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS GCA 90 bp ACTGAGCCTGGGTCTGGGGCGTGTGCGCATGCGCGGTGGAGCTTGTaGTCCGGAATCCGGTGCGGAGGCTTGGGCTCCCTGCGCTTAGCG +
Preference number: 5 (lower is better)
Translates to: TEPGSGACAHARWSL*SGIRCGGLGSLRLA
Trigger: CGCTAAGCGCAGGGAGCCCAAGCCTCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGCATGCGCACACGCCCCAGACCCAGGCTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596138.1
CDS CCA 90 bp CTCAGTCCTCCTGAGCCTGGGTCTGGGGCGTGTGCGCATGCGCGGTaGAGCTTGTGCTCCGGAATCCGGTGCGGAGGCTTGGGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LSPPEPGSGACAHAR*SLCSGIRCGGLGSL
Trigger: CAGGGAGCCCAAGCCTCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGCATGCGCACACGCCCCAGACCCAGGCTCAGGAGGACTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS TCA 90 bp ACTCAGGACCCCAAGGCAGGCAATGTGAGCCCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAACTGGGGCCTGAGCCTGGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: TQDPKAGNVSPQSSA*AQHSNNWGLSLGLG
Trigger: CCCCAGACCCAGGCTCAGGCCCCAGTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGGGGTCCTGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596352.5
CDS TCA 90 bp GGTGAACCTCCCGCGTCGGGGGCAGCACGAGTGGGAAGGGAGTGTTaGTGGCTAAACCAGCATCCACCAGGTGGAGGTGCTTCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: GEPPASGAARVGREC*WLNQHPPGGGASGC
Trigger: GCAGCCGGAAGCACCTCCACCTGGTGGATGCTGGTTTAGCCATCAACACTCCCTTCCCACTCGTGCTGCCCCCGACGCGGGAGGTTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354276.7
ENST00000595161.5
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599239.5
ENST00000599300.5
ENST00000599921.6
CDS CCA 90 bp GGTCCTCCTGCTTTCCTTTTCCCCCTGTGGGAGGAGGTCGCGGGCTaGAGGTGTTTCCTCCTGGTCCTGAGCAGGGCCAACCTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: GPPAFLFPLWEEVAG*RCFLLVLSRANLEV
Trigger: TACCTCCAGGTTGGCCCTGCTCAGGACCAGGAGGAAACACCTCCAGCCCGCGACCTCCTCCCACAGGGGGAAAAGGAAAGCAGGAGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000596138.1
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 90 bp GGGGAGAGTCATCTGCCAGGAAGAGGGGCCCGGGAAGGTCTGGGATaGCTTTGGATCAGAAGTTCGTTGGATGTGGCCGACCGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: GESHLPGRGAREGLG*LWIRSSLDVADRGC
Trigger: GCACCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGGCAGATGACTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CCA 90 bp GAAGCGGGGAGAGTCATCTGCCAGGAAGAGGGGCCCGGGAAGGTCTaGGATGGCTTTGGATCAGAAGTTCGTTGGATGTGGCCGACCGCG +
Preference number: 5 (lower is better)
Translates to: EAGRVICQEEGPGKV*DGFGSEVRWMWPTA
Trigger: CGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGGCAGATGACTCTCCCCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS GCA 90 bp AGTCGCTGGACAGCTCCTTCAGCCGGAATCTCCGCGGGTGAAGACTaGGGGGATCCTCGGTGCCAAAGCTTCTGTGGTCCTCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: SRWTAPSAGISAGED*GDPRCQSFCGPPAF
Trigger: GAAAGCAGGAGGACCACAGAAGCTTTGGCACCGAGGATCCCCGCAGTCTTCACCCGCGGAGATTCCGGCTGAAGGAGCTGTCCAGCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000596138.1
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 90 bp GTCCTGTGCCCACTGTTGGGCTTAGCAAAGACAGTGGGGGAGGGCTaGGACTGTCACGGGCTCATGGGTTCTCCTTGTCCACTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: VLCPLLGLAKTVGEG*DCHGLMGSPCPLSL
Trigger: CAGGCTCAGTGGACAAGGAGAACCCATGAGCCCGTGACAGTCCCAGCCCTCCCCCACTGTCTTTGCTAAGCCCAACAGTGGGCACAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596138.1
CDS-3UTR CAA 90 bp TCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCCATGCGCGGTGGAGCTaGTGCTCCGGAATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: SRGTCRTNFTTFSSLDAFHARWS*CSGIRC
Trigger: GCACCGGATTCCGGAGCACAAGCTCCACCGCGCATG...GAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS TCA 90 bp GGACTCTGGGTGTGTCTGTGCCTGGACACCGGGTCATCACAGAGGTaGGAGGTTGGATGTCTGGGGGTGAGACTGGCTGTACCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: GLWVCLCLDTGSSQR*EVGCLGVRLAVPGS
Trigger: TGACCCAGGTACAGCCAGTCTCACCCCCAGACATCCAACCTCTCACCTCTGTGATGACCCGGTGTCCAGGCACAGACACACCCAGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS GCA 90 bp AGACACGCGCTCGGGGCTGGAGACGTGCACACCCGGGGAAGGAGGTaGACAGGTGAGGAGCTAGGCTGTTGCAGTTCAAACTGGTATGAA +
Preference number: 5 (lower is better)
Translates to: RHALGAGDVHTRGRR*TGEELGCCSSNWYE
Trigger: TTCATACCAGTTTGAACTGCAACAGCCTAGCTCCTCACCTGTGCACCTCCTTCCCCGGGTGTGCACGTCTCCAGCCCCGAGCGCGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CCA 90 bp AGTCATCTGCCAGGAAGAGGGGCCCGGGAAGGTCTGGGATGGCTTTaGATCAGAAGTTCGTTGGATGTGGCCGACCGCGGGTGCTCGAAA +
Preference number: 5 (lower is better)
Translates to: SHLPGRGAREGLGWL*IRSSLDVADRGCSK
Trigger: TTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGGCAGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS-3UTR CAA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGATCCGGTGCGGAGGCTaGGGCTCCCTGCGCTTAGCG +
Preference number: 5 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRIRCGG*GSLRLA
Trigger: CGCTAAGCGCAGGGAGCCCAAGCCTCCGCACCGGAT...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCCAGCTGGCGGGGGCCTaGGACCACAAATCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDAQLAGA*DHKSSS
Trigger: TGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCTG...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS GCA 90 bp CCACCAGGTGGAGGTGCTTCCGGCTGCTCATTATCTTGTCCCGGATaGCACCTGTGGTGCCCAGGAAGAAAGAGGATCAGCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PPGGGASGCSLSCPG*HLWCPGRKRISCFW
Trigger: CCAGAAGCAGCTGATCCTCTTTCTTCCTGGGCACCACAGGTGGCATCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCCACCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS-3UTR CAA 90 bp TGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGCATGCGCGGTGGAGCTaGTGCTCCGGAATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: WSPGIMETSELPMVHCGQHARWS*CSGIRC
Trigger: GCACCGGATTCCGGAGCACAAGCTCCACCGCGCATG...CTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS TCA 90 bp TGGACACCGGGTCATCACAGAGGTGAGAGGTTGGATGTCTGGGGGTaGGACTGGCTGTACCTGGGTCATCTCAGGAAGGCAGTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: WTPGHHRGERLDVWG*DWLYLGHLRKAVAS
Trigger: TGAAGCCACTGCCTTCCTGAGATGACCCAGGTACAGCCAGTCTCACCCCCAGACATCCAACCTCTCACCTCTGTGATGACCCGGTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS-3UTR CAA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGATCCGGTGCGGAGGCTaGGGCTCCCTGCGCTTAGCG +
Preference number: 5 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKIRCGG*GSLRLA
Trigger: CGCTAAGCGCAGGGAGCCCAAGCCTCCGCACCGGAT...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTCGGCTGCTCATTATCTaGTCCCGGATGCCACCGTGT +
Preference number: 5 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPRLLII*SRMPPC
Trigger: ACACGGTGGCATCCGGGACAAGATAATGAGCAGCCG...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGCAGCTGGCGGGGGCCTaGGACCACAAATCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRQLAGA*DHKSSS
Trigger: TGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCTG...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS CCA 90 bp GGAAGGAGGTGCACAGGTGAGGAGCTAGGCTGTTGCAGTTCAAACTaGTATGAATGGGCAGGCAGGACGCAGAAGCGGGGAGAGTCATCT +
Preference number: 5 (lower is better)
Translates to: GRRCTGEELGCCSSN*YEWAGRTQKRGESS
Trigger: AGATGACTCTCCCCGCTTCTGCGTCCTGCCTGCCCATTCATACCAGTTTGAACTGCAACAGCCTAGCTCCTCACCTGTGCACCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS-3UTR CAA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCCTCCTGCCAGGAAGGTaGCAGGTCATTGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDALLPGR*QVIVNG
Trigger: GCCATTGACAATGACCTGCAACCTTCCTGGCAGGAG...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS GCA 90 bp GGTGGAGCCATCGTTAGCCCAATTTTACAGCTGAGGAAACCGACATaGACAGAAGTTCGTTGGATGTGGCCGACCGCGGGTGCTCGAAAG +
Preference number: 5 (lower is better)
Translates to: GGAIVSPILQLRKPT*TEVRWMWPTAGARK
Trigger: CTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGTGCATGTCGGTTTCCTCAGCTGTAAAATTGGGCTAACGATGGCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595161.5
CDS-3UTR CAA 90 bp TATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGAAAATTCTCAGTCCCATGCGCGGTGGAGCTaGTGCTCCGGAATCCGGTGC +
Preference number: 5 (lower is better)
Translates to: YGNFRASHGALRSENSQSHARWS*CSGIRC
Trigger: GCACCGGATTCCGGAGCACAAGCTCCACCGCGCATG...GGACTGAGAATTTTCTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595487.5
ENST00000598488.1
CDS-3UTR CAA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACCAGCTGGCGGGGGCCTaGGACCACAAATCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDQLAGA*DHKSSS
Trigger: TGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCTG...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCCCCCATTCCCACTTaGAAGCGCAAATGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPSPIPT*KRKCLF
Trigger: AAACAGGCATTTGCGCTTCAAAGTGGGAATGGGGGA...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCCCCCATTCCCACTTaGAAGCGCAAATGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSSPIPT*KRKCLF
Trigger: AAACAGGCATTTGCGCTTCAAAGTGGGAATGGGGGA...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCTTGTAGGCCCTGCTaGGTTGCTCCAGCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDACRPC*VAPAFS
Trigger: TGAAAAAGCTGGAGCAACCAAGCAGGGCCTACAAGC...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TGGAGCCCAGGAATTATGGAAACTTCAGAGCTTCCCATGGTGCACTGCGGTCAGGCAGAGATCATGCCATaGCACTCCAGTCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: WSPGIMETSELPMVHCGQAEIMP*HSSLGN
Trigger: GTTGCCCAGACTGGAGTGCAATGGCATGATCTCTGC...CTGACCGCAGTGCACCATGGGAAGCTCTGAAGTTTCCATAATTCCTGGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598488.1
CDS CCA 90 bp AATGCATCACCACTGGTCCAGTTTCTCCTTTCAGGATGTAGCAGCTaGCGGGGGCCTTGGACCACAAATCCAGCTCAGCCTCTTCTACTT +
Preference number: 5 (lower is better)
Translates to: NASPLVQFLLSGCSS*RGPWTTNPAQPLLL
Trigger: AAGTAGAAGAGGCTGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCTGCTACATCCTGAAAGGAGAAACTGGACCAGTGGTGATGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 90 bp ACACTTATCACACTACACATGGTACCTTTCCTTTCGGGGTCCTCATaGGGCTGCTCCTGCTTTTCCAGGGAGGTCCTGGTCCAATTCTCG +
Preference number: 5 (lower is better)
Translates to: TLITLHMVPFLSGSS*GCSCFSREVLVQFS
Trigger: CGAGAATTGGACCAGGACCTCCCTGGAAAAGCAGGAGCAGCCCCATGAGGACCCCGAAAGGAAAGGTACCATGTGTAGTGTGATAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593765.5
CDS-3UTR CAA 90 bp CAGGCCCACAGTGCCCTGGAAGCTGAGGCTCATCTATGCCAAGCAGCAACTTCGCTTCCCTTCTTGAATTaGCTTCCGAAGTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: QAHSALEAEAHLCQAATSLPFLN*LPKWVM
Trigger: CATAACCCACTTCGGAAGCAAATTCAAGAAGGGAAG...CGAAGTTGCTGCTTGGCATAGATGAGCCTCAGCTTCCAGGGCACTGTGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354276.7
CDS-3UTR CAA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTACCAGTCTTCCCTTCTaGAATTTGCTTCCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSTSLPF*NLLPKW
Trigger: CCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGGT...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp CCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCCCTGACATTCTTCTaGGCTAATGCCAAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: PEGPAGQISPPSAPWTPSSLTFF*ANAKSS
Trigger: GCTACTCTTGGCATTAGCCAAGAAGAATGTCAGGGA...AGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTCTGGCCATCTGGACATaGGACATGATGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: SPEGPAGQISPPSAPWTPLAIWT*DMMLLI
Trigger: AATCAGAAGCATCATGTCCAATGTCCAGATGGCCAG...AGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp GATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCGGCAGTTCTCTGGTTaGCTTAGAGATAACCATGTA +
Preference number: 5 (lower is better)
Translates to: DLPRDLQDKFHHLQLLGRRQFSG*LRDNHV
Trigger: TACATGGTTATCTCTAAGCAAACCAGAGAACTGCCG...GCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCCGGCTGCTCATTATCTaGTCCCGGATGCCACCGTGT +
Preference number: 5 (lower is better)
Translates to: IWTLDMMLLIVRHSCSSSRLLII*SRMPPC
Trigger: ACACGGTGGCATCCGGGACAAGATAATGAGCAGCCG...GGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCGAAGGTTGCAGGTCATaGTCAATGGCTGCAAATATT +
Preference number: 5 (lower is better)
Translates to: ISRGTCRTNFTTFSSLDAEGCRS*SMAANI
Trigger: AATATTTGCAGCCATTGACAATGACCTGCAACCTTC...GGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TTGAATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCTCCTGCCAGGAAGGTaGCAGGTCATTGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: LNLLPKWVMETKAPSAEKLLPGR*QVIVNG
Trigger: GCCATTGACAATGACCTGCAACCTTCCTGGCAGGAG...CTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CAA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCTCCTGCCAGGAAGGTaGCAGGTCATTGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLLLPGR*QVIVNG
Trigger: GCCATTGACAATGACCTGCAACCTTCCTGGCAGGAG...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGCGGCTGCTCATTATCTaGTCCCGGATGCCACCGTGT +
Preference number: 5 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLRLLII*SRMPPC
Trigger: ACACGGTGGCATCCGGGACAAGATAATGAGCAGCCG...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGTCCCTGACATTCTTCTaGGCTAATGCCAAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRSLTFF*ANAKSS
Trigger: GCTACTCTTGGCATTAGCCAAGAAGAATGTCAGGGA...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGTGAACTCAAGGCTGGCCATCTGGACATaGGACATGATGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: SSWSLVIGPVRTAKVNSRLAIWT*DMMLLI
Trigger: AATCAGAAGCATCATGTCCAATGTCCAGATGGCCAG...CCTTGAGTTCACCTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGGAATCTAACCTGGTGCTCTaGCCTCCTGCCAGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: NVWRAASIWVIIGPMEKESNLVL*PPARKV
Trigger: AACCTTCCTGGCAGGAGGCAAGAGCACCAGGTTAGA...TTCCTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS GCA 90 bp AAGCGTGAGCCACCATGTTGGCCTCTTAAAGGTTTTCTTGATCCATaGAAAGCAAGTGCATGTCCTCTGGTCACTTCTGGGACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: KREPPCWPLKGFLDP*KASACPLVTSGTSL
Trigger: GAGGGAAGTCCCAGAAGTGACCAGAGGACATGCACTTGCTTTGCATGGATCAAGAAAACCTTTAAGAGGCCAACATGGTGGCTCACGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599063.5
CDS-3UTR CAA 90 bp GTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTAGAAGTGCAGTCCTCCTGCCAGGAAGGTaGCAGGTCATTGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: VLTSTELTCAELLARSAVLLPGR*QVIVNG
Trigger: GCCATTGACAATGACCTGCAACCTTCCTGGCAGGAG...GACTGCACTTCTAGCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCAGACCAGTCTTCCCTTCTaGAATTTGCTTCCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: ICFRSGLWKQRPPVQRSQTSLPF*NLLPKW
Trigger: CCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGGT...CTGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CAA 90 bp GAGCTTCCATGTCACCATCATTGGTGTAGAGAGAAGATATTGCCCAAGTGGATCGCAGAGATCATGCCATaGCACTCCAGTCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: ELPCHHHWCREKILPKWIAEIMP*HSSLSL
Trigger: CAGGCTCAGACTGGAGTGCAATGGCATGATCTCTGC...GATCCACTTGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595487.5
CDS TCA 90 bp CCAAGAGTAGCACCACCACATCTAGAGTGTAGGTGTCAGCAAGCTTaGATGTGTCGTATGTGTCACTCCATGCCTCAATATCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PRVAPPHLECRCQQA*MCRMCHSMPQYHLH
Trigger: GTGGAGGTGATATTGAGGCATGGAGTGACACATACGACACATTCAAGCTTGCTGACACCTACACTCTAGATGTGGTGGTGCTACTCTTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 90 bp ATCGATGTTTCAGGTCAGCCTCGAGAGCTTCCATGTCACCATCATTaGTGTAGAGAGAAGATATTGCCCTGGAGGACAGAGGAAGAGAGT +
Preference number: 5 (lower is better)
Translates to: IDVSGQPRELPCHHH*CREKILPWRTEEES
Trigger: ACTCTCTTCCTCTGTCCTCCAGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTCTCGAGGCTGACCTGAAACATCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597377.1
CDS-3UTR CAA 90 bp ATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCCTCAGCCTCTTCTACTaGGGGAAAGGGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: ILAIWTLDMMLLIVRHSCLSLFY*GKGDLV
Trigger: CACAAGATCCCCTTTCCCCAAGTAGAAGAGGCTGAG...GCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AGGATCTCCCGAGGGACCTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACTTTATTGAGCACTTGTaGTATTCTCAGAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: RISRGTCRTNFTTFSSLDFIEHL*YSQSST
Trigger: AGTGGAGCTCTGAGAATACAACAAGTGCTCAATAAA...GTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAGGTCCCTCGGGAGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGGAAGAGAGCTGCCAGCATTaGGGTGATAATCGGACCTAT +
Preference number: 5 (lower is better)
Translates to: NVWRAASIWVIIGPMEKEESCQH*GDNRTY
Trigger: ATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTC...TTCCTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS CCA 90 bp ATCGATGTTTCAGGTCAGCCTCGAGAGCTTCCATGTCACCATCATTaGTGTAGAGAGAAGATATTGCCCTCATCAGCCTCAATCCTTAGC +
Preference number: 5 (lower is better)
Translates to: IDVSGQPRELPCHHH*CREKILPSSASILS
Trigger: GCTAAGGATTGAGGCTGATGAGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTCTCGAGGCTGACCTGAAACATCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595899.5
CDS-3UTR CAA 90 bp CTGCAGGACAAATTTCACCACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACCGGCAGTTCTCTGGTTaGCTTAGAGATAACCATGTA +
Preference number: 5 (lower is better)
Translates to: LQDKFHHLQLLGRLLLNDRQFSG*LRDNHV
Trigger: TACATGGTTATCTCTAAGCAAACCAGAGAACTGCCG...GTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTGGTGAAATTTGTCCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAATGGCTGCAAATATaGGGTAGGGTAGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: SGHLDIGHDASDCQTLMLQWLQI*GRVVSL
Trigger: AAGGGACACTACCCTACCCAATATTTGCAGCCATTG...GAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AATTTGCTTCCGAAGTGGGTTATGGAAACAAAGGCCCCCAGTGCAGAGAAGCCACTTCCCTTCTTGAATTaGCTTCCGAAGTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: NLLPKWVMETKAPSAEKPLPFLN*LPKWVM
Trigger: CATAACCCACTTCGGAAGCAAATTCAAGAAGGGAAG...TGGCTTCTCTGCACTGGGGGCCTTTGTTTCCATAACCCACTTCGGAAGCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CAA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGCTTCCCTTCTTGAATTaGCTTCCGAAGTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKLPFLN*LPKWVM
Trigger: CATAACCCACTTCGGAAGCAAATTCAAGAAGGGAAG...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCATGCTCCAGCTCCACCAGTCTTCCCTTCTaGAATTTGCTTCCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: IWTLDMMLLIVRHSCSSSTSLPF*NLLPKW
Trigger: CCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGGT...GGAGCTGGAGCATGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCACCAGTCTTCCCTTCTaGAATTTGCTTCCGAAGTGG +
Preference number: 5 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVTSLPF*NLLPKW
Trigger: CCACTTCGGAAGCAAATTCAAGAAGGGAAGACTGGT...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp GATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCCTCAGCCTCTTCTACTaGGGGAAAGGGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: DLSPSSYFYRANLCRATGLSLFY*GKGDLV
Trigger: CACAAGATCCCCTTTCCCCAAGTAGAAGAGGCTGAG...GCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACCTCAGCCTCTTCTACTaGGGGAAAGGGGATCTTGTG +
Preference number: 5 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHLSLFY*GKGDLV
Trigger: CACAAGATCCCCTTTCCCCAAGTAGAAGAGGCTGAG...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp CACCTTCAGCTCCTTGGACGCCTTCTTCTGAATGACGCTATCAAAATCACAGTCTCCCTGACATTCTTCTaGGCTAATGCCAAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: HLQLLGRLLLNDAIKITVSLTFF*ANAKSS
Trigger: GCTACTCTTGGCATTAGCCAAGAAGAATGTCAGGGA...GACTGTGATTTTGATAGCGTCATTCAGAAGAAGGCGTCCAAGGAGCTGAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp GAAAGTCAGGTCTCTCTCAGGGTGAGTTCTGACCAGTCTTCCCTTCTTGAATTTCAATGGCTGCAAATATaGGGTAGGGTAGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: ESQVSLRVSSDQSSLLEFQWLQI*GRVVSL
Trigger: AAGGGACACTACCCTACCCAATATTTGCAGCCATTG...AAATTCAAGAAGGGAAGACTGGTCAGAACTCACCCTGAGAGAGACCTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CAA 90 bp TCAAAATCACAGTCTAGCTGGTCACTGGTGATTGGCCCTGTTAGGACAGCCAAGGAAGGTTGCAGGTCATaGTCAATGGCTGCAAATATT +
Preference number: 5 (lower is better)
Translates to: SKSQSSWSLVIGPVRTAKEGCRS*SMAANI
Trigger: AATATTTGCAGCCATTGACAATGACCTGCAACCTTC...CTTGGCTGTCCTAACAGGGCCAATCACCAGTGACCAGCTAGACTGTGATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TGGAATGTCTGGAGAGCTGCCAGCATTTGGGTGATAATCGGACCTATGGAGAAGGAAGGTTGCAGGTCATaGTCAATGGCTGCAAATATT +
Preference number: 5 (lower is better)
Translates to: WNVWRAASIWVIIGPMEKEGCRS*SMAANI
Trigger: AATATTTGCAGCCATTGACAATGACCTGCAACCTTC...CTTCTCCATAGGTCCGATTATCACCCAAATGCTGGCAGCTCTCCAGACATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597713.1
CDS-3UTR CAA 90 bp GATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTGGCTCCCCCATTCCCACTTaGAAGCGCAAATGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: DLSPSSYFYRANLCRATGSPIPT*KRKCLF
Trigger: AAACAGGCATTTGCGCTTCAAAGTGGGAATGGGGGA...GCCAGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGGCTTGTAGGCCCTGCTaGGTTGCTCCAGCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: YHIHSGHLDIGHDASDCQACRPC*VAPAFS
Trigger: TGAAAAAGCTGGAGCAACCAAGCAGGGCCTACAAGC...CTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599111.5
ENST00000599921.6
CDS TCA 90 bp TTGAAGCGCAAATGCCTGTTTTCTTCACAAAATCCATCAAGTTACTaGGTGAGCCTAGGGAAAGAAGCCGAGACAGCCAAGGTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: LKRKCLFSSQNPSSY*VSLGKEAETAKVSS
Trigger: TGAACTCACCTTGGCTGTCTCGGCTTCTTTCCCTAGGCTCACTCAGTAACTTGATGGATTTTGTGAAGAAAACAGGCATTTGCGCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596353.1
CDS TCA 90 bp TTGAAGCGCAAATGCCTGTTTTCTTCACAAAATCCATCAAGTTACTaGGTGAGCCACCATGGCCGGCTAGGATGCATGTTCTCATTTCAG +
Preference number: 5 (lower is better)
Translates to: LKRKCLFSSQNPSSY*VSHHGRLGCMFSFQ
Trigger: CTGAAATGAGAACATGCATCCTAGCCGGCCATGGTGGCTCACTCAGTAACTTGATGGATTTTGTGAAGAAAACAGGCATTTGCGCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS-3UTR CAA 90 bp GGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTCGGCAGTTCTCTGGTTaGCTTAGAGATAACCATGTA +
Preference number: 5 (lower is better)
Translates to: GLNYHIHSGHLDIGHDASRQFSG*LRDNHV
Trigger: TACATGGTTATCTCTAAGCAAACCAGAGAACTGCCG...AGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AAGTGCAGTCATAAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATCAATGGCTGCAAATATaGGGTAGGGTAGTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: KCSHKGAVEGIGLNYHIHQWLQI*GRVVSL
Trigger: AAGGGACACTACCCTACCCAATATTTGCAGCCATTG...ATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTTATGACTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp TTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTCACTTCCCTTCTTGAATTaGCTTCCGAAGTGGGTTATG +
Preference number: 5 (lower is better)
Translates to: FILAIWTLDMMLLIVRHSLPFLN*LPKWVM
Trigger: CATAACCCACTTCGGAAGCAAATTCAAGAAGGGAAG...TGAGTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp CATGATTTAAGCCCAAGTTCTTACTTCTACAGAGCTAACTTGTGCAGAGCTACTCTGGCCATCTGGACATaGGACATGATGCTTCTGATT +
Preference number: 5 (lower is better)
Translates to: HDLSPSSYFYRANLCRATLAIWT*DMMLLI
Trigger: AATCAGAAGCATCATGTCCAATGTCCAGATGGCCAG...AGTAGCTCTGCACAAGTTAGCTCTGTAGAAGTAAGAACTTGGGCTTAAATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp AAAGGAGCAGTGGAAGGCATTGGTCTGAACTATCACATTCATTCTGGCCATCTGTTTATTGAGCACTTGTaGTATTCTCAGAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: KGAVEGIGLNYHIHSGHLFIEHL*YSQSST
Trigger: AGTGGAGCTCTGAGAATACAACAAGTGCTCAATAAA...CAGATGGCCAGAATGAATGTGATAGTTCAGACCAATGCCTTCCACTGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ATTGGTCTGAACTATCACATTCATTCTGGCCATCTGGACATTGGACATGATGCTGAAGGTTGCAGGTCATaGTCAATGGCTGCAAATATT +
Preference number: 5 (lower is better)
Translates to: IGLNYHIHSGHLDIGHDAEGCRS*SMAANI
Trigger: AATATTTGCAGCCATTGACAATGACCTGCAACCTTC...AGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGTGATAGTTCAGACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS-3UTR CAA 90 bp ACATTCATTCTGGCCATCTGGACATTGGACATGATGCTTCTGATTGTCAGACACTTTATTGAGCACTTGTaGTATTCTCAGAGCTCCACT +
Preference number: 5 (lower is better)
Translates to: TFILAIWTLDMMLLIVRHFIEHL*YSQSST
Trigger: AGTGGAGCTCTGAGAATACAACAAGTGCTCAATAAA...GTGTCTGACAATCAGAAGCATCATGTCCAATGTCCAGATGGCCAGAATGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354276.7
ENST00000599111.5
ENST00000599921.6
CDS GCA 72 bp GGGTCTGGGGCGTGTGCGCATGCGCGGTGGAGCTTGTaGTCCGGAATCCGGTGCGGAGGCTTGGGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: GSGACAHARWSL*SGIRCGGLGSL
Trigger: CAGGGAGCCCAAGCCTCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGCATGCGCACACGCCCCAGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000596138.1
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS CAA 72 bp CCTGGGTCTGGGGCGTGTGCGCATGCGCGGTGGAGCTaGTGCTCCGGAATCCGGTGCGGAGGCTTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PGSGACAHARWS*CSGIRCGGLGS
Trigger: GGAGCCCAAGCCTCCGCACCGGATTCCGGAGCACAAGCTCCACCGCGCATGCGCACACGCCCCAGACCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000595899.5
ENST00000596138.1
ENST00000596352.5
ENST00000598488.1
ENST00000598813.5
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS TCA 72 bp CCCAAGGCAGGCAATGTGAGCCCGCAGTCCTCCGCCTaGGCCCAGCACAGCAACAACTGGGGCCTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: PKAGNVSPQSSA*AQHSNNWGLSL
Trigger: CAGGCTCAGGCCCCAGTTGTTGCTGTGCTGGGCTCAGGCGGAGGACTGCGGGCTCACATTGCCTGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596352.5
CDS TCA 72 bp GGGACTGTCACGGGCTCATGGGTTCTCCTTGTCCACTaGGCCTGGGTCTGGGGCGTGTGCGCATGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: GTVTGSWVLLVH*AWVWGVCACAV
Trigger: CACCGCGCATGCGCACACGCCCCAGACCCAGGCTCAGTGGACAAGGAGAACCCATGAGCCCGTGACAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596138.1
CDS GCA 72 bp ATGGGCAGGCAGGACGCAGAAGCGGGGAGAGTCATCTaGCAGGAAGAGGGGCCCGGGAAGGTCTGGGATGGC +
Preference number: 6 (lower is better)
Translates to: MGRQDAEAGRVI*QEEGPGKVWDG
Trigger: GCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGGCAGATGACTCTCCCCGCTTCTGCGTCCTGCCTGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS TCA 72 bp CCCGCGTCGGGGGCAGCACGAGTGGGAAGGGAGTGTTaGTGGCTAAACCAGCATCCACCAGGTGGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: PASGAARVGREC*WLNQHPPGGGA
Trigger: AGCACCTCCACCTGGTGGATGCTGGTTTAGCCATCAACACTCCCTTCCCACTCGTGCTGCCCCCGACGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354276.7
ENST00000595161.5
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599239.5
ENST00000599300.5
ENST00000599921.6
CDS CCA 72 bp CCAGGAAGAGGGGCCCGGGAAGGTCTGGGATGGCTTTaGATCAGAAGTTCGTTGGATGTGGCCGACCGCGGG +
Preference number: 6 (lower is better)
Translates to: PGRGAREGLGWL*IRSSLDVADRG
Trigger: CCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CAA 90 bp AGAGGGGCCCGGGAAGGTCTGGGATGGCTTTGGATCAGAAGTTCGTaGGATGTGGCCGACCGCGGGTGCTCGAAAGGATCTCCGGCACTG +
Preference number: 6 (lower is better)
Translates to: RGAREGLGWLWIRSS*DVADRGCSKGSPAL
Trigger: CAGTGCCGGAGATCCTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS TCA 72 bp TCGCTGGACAGCTCCTTCAGCCGGAATCTCCGCGGGTaGAGACTGCGGGGATCCTCGGTGCCAAAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: SLDSSFSRNLRG*RLRGSSVPKLL
Trigger: CAGAAGCTTTGGCACCGAGGATCCCCGCAGTCTTCACCCGCGGAGATTCCGGCTGAAGGAGCTGTCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000596138.1
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS GCA 72 bp CTCGGGGCTGGAGACGTGCACACCCGGGGAAGGAGGTaGACAGGTGAGGAGCTAGGCTGTTGCAGTTCAAAC +
Preference number: 6 (lower is better)
Translates to: LGAGDVHTRGRR*TGEELGCCSSN
Trigger: GTTTGAACTGCAACAGCCTAGCTCCTCACCTGTGCACCTCCTTCCCCGGGTGTGCACGTCTCCAGCCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CAA 90 bp GAGTCATCTGCCAGGAAGAGGGGCCCGGGAAGGTCTGGGATGGCTTaGGATCAGAAGTTCGTTGGATGTGGCCGACCGCGGGTGCTCGAA +
Preference number: 6 (lower is better)
Translates to: ESSARKRGPGRSGMA*DQKFVGCGRPRVLE
Trigger: TTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGGCAGATGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS GCA 72 bp ACAGCTCCTTCAGCCGGAATCTCCGCGGGTGAAGACTaGGGGGATCCTCGGTGCCAAAGCTTCTGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: TAPSAGISAGED*GDPRCQSFCGP
Trigger: AGGACCACAGAAGCTTTGGCACCGAGGATCCCCGCAGTCTTCACCCGCGGAGATTCCGGCTGAAGGAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000596138.1
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 72 bp GTCTGGGATGGCTTTGGATCAGAAGTTCGTTGGATGTaGCCGACCGCGGGTGCTCGAAAGGATCTCCGGCAC +
Preference number: 6 (lower is better)
Translates to: VWDGFGSEVRWM*PTAGARKDLRH
Trigger: GTGCCGGAGATCCTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CCA 72 bp CATCTGCCAGGAAGAGGGGCCCGGGAAGGTCTGGGATaGCTTTGGATCAGAAGTTCGTTGGATGTGGCCGAC +
Preference number: 6 (lower is better)
Translates to: HLPGRGAREGLG*LWIRSSLDVAD
Trigger: GTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGGCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CCA 72 bp CCACTGTTGGGCTTAGCAAAGACAGTGGGGGAGGGCTaGGACTGTCACGGGCTCATGGGTTCTCCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: PLLGLAKTVGEG*DCHGLMGSPCP
Trigger: TGGACAAGGAGAACCCATGAGCCCGTGACAGTCCCAGCCCTCCCCCACTGTCTTTGCTAAGCCCAACAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596138.1
CDS CCA 72 bp CTGAGGAAACCGACATGCACAGAAGTTCGTTGGATGTaGCCGACCGCGGGTGCTCGAAAGGATCTCCGGCAC +
Preference number: 6 (lower is better)
Translates to: LRKPTCTEVRWM*PTAGARKDLRH
Trigger: GTGCCGGAGATCCTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGTGCATGTCGGTTTCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595161.5
CDS TCA 72 bp GTGTGTCTGTGCCTGGACACCGGGTCATCACAGAGGTaGGAGGTTGGATGTCTGGGGGTGAGACTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: VCLCLDTGSSQR*EVGCLGVRLAV
Trigger: TACAGCCAGTCTCACCCCCAGACATCCAACCTCTCACCTCTGTGATGACCCGGTGTCCAGGCACAGACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS GCA 72 bp GGAATCTCCGCGGGTGAAGACTGCGGGGATCCTCGGTaGCAAAGCTTCTGTGGTCCTCCTGCTTTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: GISAGEDCGDPR*QSFCGPPAFLF
Trigger: GAAAAGGAAAGCAGGAGGACCACAGAAGCTTTGGCACCGAGGATCCCCGCAGTCTTCACCCGCGGAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594156.5
ENST00000596138.1
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS GCA 72 bp GGAGGTGCTTCCGGCTGCTCATTATCTTGTCCCGGATaGCACCTGTGGTGCCCAGGAAGAAAGAGGATCAGC +
Preference number: 6 (lower is better)
Translates to: GGASGCSLSCPG*HLWCPGRKRIS
Trigger: GCTGATCCTCTTTCTTCCTGGGCACCACAGGTGGCATCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS GCA 72 bp CTAAACCAGCATCCACCAGGTGGAGGTGCTTCCGGCTaGTCATTATCTTGTCCCGGATGCCACCTGTGGTGC +
Preference number: 6 (lower is better)
Translates to: LNQHPPGGGASG*SLSCPGCHLWC
Trigger: GCACCACAGGTGGCATCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGATGCTGGTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS GCA 72 bp CGGGGAAGGAGGTGCACAGGTGAGGAGCTAGGCTGTTaGAGTTCAAACTGGTATGAATGGGCAGGCAGGACG +
Preference number: 6 (lower is better)
Translates to: RGRRCTGEELGC*SSNWYEWAGRT
Trigger: CGTCCTGCCTGCCCATTCATACCAGTTTGAACTGCAACAGCCTAGCTCCTCACCTGTGCACCTCCTTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS GCA 72 bp CCAGCTCCAGATCAAACAAGTGGATCCAGAGACCCCTaGGAGGTACGTGACGGCATCCAACAGGCCCTGTTC +
Preference number: 6 (lower is better)
Translates to: PAPDQTSGSRDP*EVRDGIQQALF
Trigger: GAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCCACTTGTTTGATCTGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598813.5
CDS CCA 72 bp CCACTGGTCCAGTTTCTCCTTTCAGGATGTAGCAGCTaGCGGGGGCCTTGGACCACAAATCCAGCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: PLVQFLLSGCSS*RGPWTTNPAQP
Trigger: AGGCTGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCTGCTACATCCTGAAAGGAGAAACTGGACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 72 bp GGGAAGGTCTGGGATGGCTTTGGATCAGAAGTTCGTTaGATGTGGCCGACCGCGGGTGCTCGAAAGGATCTC +
Preference number: 6 (lower is better)
Translates to: GKVWDGFGSEVR*MWPTAGARKDL
Trigger: GAGATCCTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CAA 72 bp GGCCTTGGACCACAAATCCAGCTCAGCCTCTTCTACTaGGGGAAAGGGGATCTTGTGGCGGCGGCAGTAGTC +
Preference number: 6 (lower is better)
Translates to: GLGPQIQLSLFY*GKGDLVAAAVV
Trigger: GACTACTGCCGCCGCCACAAGATCCCCTTTCCCCAAGTAGAAGAGGCTGAGCTGGATTTGTGGTCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599300.5
ENST00000599921.6
CDS CAA 72 bp CGGGAAGGTCTGGGATGGCTTTGGATCAGAAGTTCGTaGGATGTGGCCGACCGCGGGTGCTCGAAAGGATCT +
Preference number: 6 (lower is better)
Translates to: REGLGWLWIRSS*DVADRGCSKGS
Trigger: AGATCCTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CAA 90 bp AAACCAGCATCCACCAGGTGGAGGTGCTTCCGGCTGCTCATTATCTaGTCCCGGATGCCACCTGTGGTGCCCAGGAAGAAAGAGGATCAG +
Preference number: 6 (lower is better)
Translates to: KPASTRWRCFRLLII*SRMPPVVPRKKEDQ
Trigger: CTGATCCTCTTTCTTCCTGGGCACCACAGGTGGCATCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGATGCTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS TCA 72 bp GGTCATCACAGAGGTGAGAGGTTGGATGTCTGGGGGTaGGACTGGCTGTACCTGGGTCATCTCAGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GHHRGERLDVWG*DWLYLGHLRKA
Trigger: TGCCTTCCTGAGATGACCCAGGTACAGCCAGTCTCACCCCCAGACATCCAACCTCTCACCTCTGTGATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS CCA 72 bp TCCGGCTGCTCATTATCTTGTCCCGGATGCCACCTGTaGTGCCCAGGAAGAAAGAGGATCAGCTGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SGCSLSCPGCHL*CPGRKRISCFW
Trigger: CCAGAAGCAGCTGATCCTCTTTCTTCCTGGGCACCACAGGTGGCATCCGGGACAAGATAATGAGCAGCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CCA 72 bp AGAGTCATCTGCCAGGAAGAGGGGCCCGGGAAGGTCTaGGATGGCTTTGGATCAGAAGTTCGTTGGATGTGG +
Preference number: 6 (lower is better)
Translates to: RVICQEEGPGKV*DGFGSEVRWMW
Trigger: CCACATCCAACGAACTTCTGATCCAAAGCCATCCCAGACCTTCCCGGGCCCCTCTTCCTGGCAGATGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CCA 72 bp TGCACAGGTGAGGAGCTAGGCTGTTGCAGTTCAAACTaGTATGAATGGGCAGGCAGGACGCAGAAGCGGGGA +
Preference number: 6 (lower is better)
Translates to: CTGEELGCCSSN*YEWAGRTQKRG
Trigger: TCCCCGCTTCTGCGTCCTGCCTGCCCATTCATACCAGTTTGAACTGCAACAGCCTAGCTCCTCACCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS TCA 72 bp CTTACCAAGTGGATCCAGAGACCCCTGCGAGGTACGTaGCGGCATCCAACAGGCCCTGTTCTTTCATCTCAC +
Preference number: 6 (lower is better)
Translates to: LTKWIQRPLRGT*RHPTGPVLSSH
Trigger: GTGAGATGAAAGAACAGGGCCTGTTGGATGCCGTCACGTACCTCGCAGGGGTCTCTGGATCCACTTGGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600170.1
CDS GCA 72 bp GTGAACTCGAACCAGGTCTCTGGTGCTCTTGCCTCCTaGCAGGAAGGTTGCAGGTCATTGTCAATGGCTGCA +
Preference number: 6 (lower is better)
Translates to: VNSNQVSGALAS*QEGCRSLSMAA
Trigger: TGCAGCCATTGACAATGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACCAGAGACCTGGTTCGAGTTCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000598457.5
ENST00000599111.5
ENST00000599921.6
ENST00000601946.1
CDS GCA 72 bp CTAAACCAGCATCCACCAGGTGGAGGTGCTTCCGGCTaGTCATTATCTTGTCCCGGATGCCACCGTGTTTGT +
Preference number: 6 (lower is better)
Translates to: LNQHPPGGGASG*SLSCPGCHRVC
Trigger: ACAAACACGGTGGCATCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGATGCTGGTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354276.7
ENST00000595161.5
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599300.5
ENST00000599921.6
CDS GCA 72 bp GTGTTGATGGCTAAACCAGCATCCACCAGGTGGAGGTaGTTCCGGCTGCTCATTATCTTGTCCCGGATGCCA +
Preference number: 6 (lower is better)
Translates to: VLMAKPASTRWR*FRLLIILSRMP
Trigger: TGGCATCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGATGCTGGTTTAGCCATCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354276.7
ENST00000595161.5
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599239.5
ENST00000599300.5
ENST00000599921.6
CDS CCA 72 bp TTTCTCCTTTCAGGATGTAGCAGCTGGCGGGGGCCTTaGACCACAAATCCAGCTCAGCCTCTTCTACTTGGG +
Preference number: 6 (lower is better)
Translates to: FLLSGCSSWRGP*TTNPAQPLLLG
Trigger: CCCAAGTAGAAGAGGCTGAGCTGGATTTGTGGTCCAAGGCCCCCGCCAGCTGCTACATCCTGAAAGGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599300.5
ENST00000599921.6
CDS CCA 72 bp TTACAGCTGAGGAAACCGACATGCACAGAAGTTCGTTaGATGTGGCCGACCGCGGGTGCTCGAAAGGATCTC +
Preference number: 6 (lower is better)
Translates to: LQLRKPTCTEVR*MWPTAGARKDL
Trigger: GAGATCCTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGTGCATGTCGGTTTCCTCAGCTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595161.5
CDS CAA 72 bp TCCACCAGGTGGAGGTGCTTCCGGCTGCTCATTATCTaGTCCCGGATGCCACCGTGTTTGTACAGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: STRWRCFRLLII*SRMPPCLYRKL
Trigger: CAACTTCCTGTACAAACACGGTGGCATCCGGGACAAGATAATGAGCAGCCGGAAGCACCTCCACCTGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354276.7
ENST00000595161.5
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599300.5
ENST00000599921.6
CDS GCA 72 bp GTCCTCCTGCCAAAGAAATGGCTCTTCTTAGTCCTGTaGCCACTGTTGGGCTTAGCAAAGACAGTGGGGGAG +
Preference number: 6 (lower is better)
Translates to: VLLPKKWLFLVL*PLLGLAKTVGE
Trigger: CTCCCCCACTGTCTTTGCTAAGCCCAACAGTGGGCACAGGACTAAGAAGAGCCATTTCTTTGGCAGGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596138.1
CDS CAA 72 bp TTTACAGCTGAGGAAACCGACATGCACAGAAGTTCGTaGGATGTGGCCGACCGCGGGTGCTCGAAAGGATCT +
Preference number: 6 (lower is better)
Translates to: FTAEETDMHRSS*DVADRGCSKGS
Trigger: AGATCCTTTCGAGCACCCGCGGTCGGCCACATCCAACGAACTTCTGTGCATGTCGGTTTCCTCAGCTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595161.5
CDS TCA 72 bp TTGTCCCGGATGCCACCGTGTTTGTACAGGAAGTTGTaGGTGGTCCCCCATTCCCACTTTGAAGCGCAAATG +
Preference number: 6 (lower is better)
Translates to: LSRMPPCLYRKL*VVPHSHFEAQM
Trigger: CATTTGCGCTTCAAAGTGGGAATGGGGGACCACTCACAACTTCCTGTACAAACACGGTGGCATCCGGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354276.7
ENST00000595161.5
ENST00000596353.1
ENST00000596510.5
ENST00000599111.5
ENST00000599300.5
ENST00000599921.6
ENST00000601946.1
CDS TCA 72 bp CAGCTGCTTCTGGGGACGTGTTTGTACAGGAAGTTGTaGGTGGTCCCCCATTCCCACTTTGAAGCGCAAATG +
Preference number: 6 (lower is better)
Translates to: QLLLGTCLYRKL*VVPHSHFEAQM
Trigger: CATTTGCGCTTCAAAGTGGGAATGGGGGACCACTCACAACTTCCTGTACAAACACGTCCCCAGAAGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599239.5
CDS CCA 72 bp TTACTACCTCTCCCTCCCTCTAAATGTTTGCTTACCTaGTGCTCTTGCCTCCTGCCAGGAAGGTTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LLPLPPSKCLLT*CSCLLPGRLQV
Trigger: GACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACCAGGTAAGCAAACATTTAGAGGGAGGGAGAGGTAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599063.5
CDS TCA 72 bp CCCAAGCCTCTCATCTGCCAGACTGAAGTCAGTAGATaGACTCTGGCTGACTTTCCCCACATTTCCACTTGG +
Preference number: 6 (lower is better)
Translates to: PKPLICQTEVSR*TLADFPHISTW
Trigger: CCAAGTGGAAATGTGGGGAAAGTCAGCCAGAGTTCATCTACTGACTTCAGTCTGGCAGATGAGAGGCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS GCA 72 bp CCTCTAAATGTTTGCTTACCTGGTGCTCTTGCCTCCTaGCAGGAAGGTTGCAGGTCATTGTCAATGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PLNVCLPGALAS*QEGCRSLSMAA
Trigger: TGCAGCCATTGACAATGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACCAGGTAAGCAAACATTTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599063.5
CDS CCA 72 bp TCAGGTCAGCCTCGAGAGCTTCCATGTCACCATCATTaGTGTAGAGAGAAGATATTGCCCTGGAGGACAGAG +
Preference number: 6 (lower is better)
Translates to: SGQPRELPCHHH*CREKILPWRTE
Trigger: CTCTGTCCTCCAGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTCTCGAGGCTGACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597377.1
CDS CCA 72 bp AGGGTAGTGTCCCTTCTTCCACGGGCTTCTTCATATTaGACAAATGAGACTCCGGCAGTTCTCTGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: RVVSLLPRASSY*TNETPAVLWFA
Trigger: AGCAAACCAGAGAACTGCCGGAGTCTCATTTGTCCAATATGAAGAAGCCCGTGGAAGAAGGGACACTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000597377.1
ENST00000598457.5
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 72 bp TCAGGTCAGCCTCGAGAGCTTCCATGTCACCATCATTaGTGTAGAGAGAAGATATTGCCCTCATCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: SGQPRELPCHHH*CREKILPSSAS
Trigger: TGAGGCTGATGAGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTCTCGAGGCTGACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594156.5
ENST00000595899.5
CDS CAA 72 bp AGGAAGGTTGCAGGTCATTGTCAATGGCTGCAAATATaGGGTAGGGTAGTGTCCCTTCTTCCACGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: RKVAGHCQWLQI*GRVVSLLPRAS
Trigger: AGAAGCCCGTGGAAGAAGGGACACTACCCTACCCAATATTTGCAGCCATTGACAATGACCTGCAACCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354276.7
ENST00000597377.1
ENST00000597713.1
ENST00000598457.5
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS CAA 72 bp ACTCTAACCTGGTGCTCTTGCCTCCTGCCAGGAAGGTaGCAGGTCATTGTCAATGGCTGCAAATATTGGGTA +
Preference number: 6 (lower is better)
Translates to: TLTWCSCLLPGR*QVIVNGCKYWV
Trigger: TACCCAATATTTGCAGCCATTGACAATGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACCAGGTTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597377.1
ENST00000597713.1
CDS CAA 72 bp TTGCTTACCTGGTGCTCTTGCCTCCTGCCAGGAAGGTaGCAGGTCATTGTCAATGGCTGCAAATATTGGGTA +
Preference number: 6 (lower is better)
Translates to: LLTWCSCLLPGR*QVIVNGCKYWV
Trigger: TACCCAATATTTGCAGCCATTGACAATGACCTGCAACCTTCCTGGCAGGAGGCAAGAGCACCAGGTAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599063.5
CDS CAA 90 bp CCCACCTACCCGGCCACGTTCATCAACTCTCTAAGGATCTTCTTCTaGTTTTCCCTGACATTCTTCTTGGCTAATGCCAAGAGTAGCACC +
Preference number: 6 (lower is better)
Translates to: PTYPATFINSLRIFF*FSLTFFLANAKSST
Trigger: GGTGCTACTCTTGGCATTAGCCAAGAAGAATGTCAGGGAAAACAAGAAGAAGATCCTTAGAGAGTTGATGAACGTGGCCGGGTAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354276.7
ENST00000596510.5
CDS CAA 72 bp AGCGTGAGCCACCATGTTGGCCTCTTAAAGGTTTTCTaGATCCATGCAAAGCAAGTGCATGTCCTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SVSHHVGLLKVF*IHAKQVHVLWS
Trigger: TGACCAGAGGACATGCACTTGCTTTGCATGGATCAAGAAAACCTTTAAGAGGCCAACATGGTGGCTCACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599063.5
CDS CAA 90 bp CCTCGAGAGCTTCCATGTCACCATCATTGGTGTAGAGAGAAGATATaGCCCTGGAGGACAGAGGAAGAGAGTGAGTTGGGCATTTTAAGT +
Preference number: 6 (lower is better)
Translates to: PRELPCHHHWCREKI*PWRTEEESELGILS
Trigger: ACTTAAAATGCCCAACTCACTCTCTTCCTCTGTCCTCCAGGGCAATATCTTCTCTCTACACCAATGATGGTGACATGGAAGCTCTCGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597377.1
CDS TCA 72 bp GTCCCTTCTTCCACGGGCTTCTTCATATTGGACAAATaGGACTCCGGCAGTTCTCTGGTTTGCTTAGAGATA +
Preference number: 6 (lower is better)
Translates to: VPSSTGFFILDK*DSGSSLVCLEI
Trigger: TATCTCTAAGCAAACCAGAGAACTGCCGGAGTCTCATTTGTCCAATATGAAGAAGCCCGTGGAAGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354276.7
ENST00000597377.1
ENST00000598457.5
ENST00000599063.5
ENST00000599111.5
ENST00000599921.6
CDS TCA 72 bp TCCATGCCTCAATATCACCTCCACAGGCATCTATGTTaGACAGGGGAAAATGCATCACCACTGGTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: SMPQYHLHRHLC*TGENASPLVQF
Trigger: AAACTGGACCAGTGGTGATGCATTTTCCCCTGTTCAACATAGATGCCTGTGGAGGTGATATTGAGGCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS TCA 72 bp GCACCACCACATCTAGAGTGTAGGTGTCAGCAAGCTTaGATGTGTCGTATGTGTCACTCCATGCCTCAATAT +
Preference number: 6 (lower is better)
Translates to: APPHLECRCQQA*MCRMCHSMPQY
Trigger: ATATTGAGGCATGGAGTGACACATACGACACATTCAAGCTTGCTGACACCTACACTCTAGATGTGGTGGTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS TCA 72 bp AAATGCCTGTTTTCTTCACAAAATCCATCAAGTTACTaGGTGAGCCACCATGGCCGGCTAGGATGCATGTTC +
Preference number: 6 (lower is better)
Translates to: KCLFSSQNPSSY*VSHHGRLGCMF
Trigger: GAACATGCATCCTAGCCGGCCATGGTGGCTCACTCAGTAACTTGATGGATTTTGTGAAGAAAACAGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS GCA 72 bp GTCAGCAAGCTTGAATGTGTCGTATGTGTCACTCCATaGCTCAATATCACCTCCACAGGCATCTATGTTGAA +
Preference number: 6 (lower is better)
Translates to: VSKLECVVCVTP*LNITSTGIYVE
Trigger: TTCAACATAGATGCCTGTGGAGGTGATATTGAGGCATGGAGTGACACATACGACACATTCAAGCTTGCTGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS CCA 72 bp TATTCCAGTAAATTATTGAACATGAGGCGGAAGCTGTaGGAAACCCCAAACTATTGCCAGTCGGTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: YSSKLLNMRRKL*ETPNYCQSVRS
Trigger: GCTTCTGACCGACTGGCAATAGTTTGGGGTTTCCCACAGCTTCCGCCTCATGTTCAATAATTTACTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600170.1
CDS CAA 72 bp CCGGCCACGTTCATCAACTCTCTAAGGATCTTCTTCTaGTTTTCCCTGACATTCTTCTTGGCTAATGCCAAG +
Preference number: 6 (lower is better)
Translates to: PATFINSLRIFF*FSLTFFLANAK
Trigger: CTTGGCATTAGCCAAGAAGAATGTCAGGGAAAACAAGAAGAAGATCCTTAGAGAGTTGATGAACGTGGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS TCA 72 bp AAATGCCTGTTTTCTTCACAAAATCCATCAAGTTACTaGGTGAGCCTAGGGAAAGAAGCCGAGACAGCCAAG +
Preference number: 6 (lower is better)
Translates to: KCLFSSQNPSSY*VSLGKEAETAK
Trigger: CTTGGCTGTCTCGGCTTCTTTCCCTAGGCTCACTCAGTAACTTGATGGATTTTGTGAAGAAAACAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596353.1
CDS GCA 72 bp ACGCTACTTCACTCTCAGAATTTTTCACCGGATACCTaGTCTCGCCTCTCCTTGTCTCTCCATATAATTTAC +
Preference number: 6 (lower is better)
Translates to: TLLHSQNFSPDT*SRLSLSLHIIY
Trigger: GTAAATTATATGGAGAGACAAGGAGAGGCGAGAGCAGGTATCCGGTGAAAAATTCTGAGAGTGAAGTAGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596510.5
CDS TCA 72 bp TTGCTGGGCCAAATAGTATTTCTGGATCTAGATCCTTaGGGAATTCCACACTGTCTCCTACAATGGTTGAAC +
Preference number: 6 (lower is better)
Translates to: LLGQIVFLDLDP*GIPHCLLQWLN
Trigger: GTTCAACCATTGTAGGAGACAGTGTGGAATTCCTCAAGGATCTAGATCCAGAAATACTATTTGGCCCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593765.5
CDS CAA 72 bp CTAAGGATCTTCTTCTTGTTTTCCCTGACATTCTTCTaGGCTAATGCCAAGAGTAGCACCACCACATCTAGA +
Preference number: 6 (lower is better)
Translates to: LRIFFLFSLTFF*ANAKSSTTTSR
Trigger: TCTAGATGTGGTGGTGCTACTCTTGGCATTAGCCAAGAAGAATGTCAGGGAAAACAAGAAGAAGATCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354276.7
ENST00000594790.1
ENST00000596510.5
ENST00000599111.5
ENST00000599921.6
CDS CAA 72 bp ATTGCTGGGCCAAATAGTATTTCTGGATCTAGATCCTaGAGGAATTCCACACTGTCTCCTACAATGGTTGAA +
Preference number: 6 (lower is better)
Translates to: IAGPNSISGSRS*RNSTLSPTMVE
Trigger: TTCAACCATTGTAGGAGACAGTGTGGAATTCCTCAAGGATCTAGATCCAGAAATACTATTTGGCCCAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593765.5
CDS CAA 90 bp AGTAATGGGATTGCTGGGCCAAATAGTATTTCTGGATCTAGATCCTaGAGGAATTCCACACTGTCTCCTACAATGGTTGAACTAATTTAC +
Preference number: 6 (lower is better)
Translates to: SNGIAGPNSISGSRS*RNSTLSPTMVELIY
Trigger: GTAAATTAGTTCAACCATTGTAGGAGACAGTGTGGAATTCCTCAAGGATCTAGATCCAGAAATACTATTTGGCCCAGCAATCCCATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593765.5
CDS CAA 72 bp ATTTACATTCCTTTGGGCATATACCCAGTAATGGGATaGCTGGGCCAAATAGTATTTCTGGATCTAGATCCT +
Preference number: 6 (lower is better)
Translates to: IYIPLGIYPVMG*LGQIVFLDLDP
Trigger: AGGATCTAGATCCAGAAATACTATTTGGCCCAGCAATCCCATTACTGGGTATATGCCCAAAGGAATGTAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593765.5
CDS TCA 72 bp ATCCTTGAGGAATTCCACACTGTCTCCTACAATGGTTaGACTAATTTACATTGGGGGATTACATTCCAACAT +
Preference number: 6 (lower is better)
Translates to: ILEEFHTVSYNG*TNLHWGITFQH
Trigger: ATGTTGGAATGTAATCCCCCAATGTAAATTAGTTCAACCATTGTAGGAGACAGTGTGGAATTCCTCAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593765.5
CDS CAA 90 bp ACATACATGTGCCTGTATCTTTCTAACAGAATGATTTACATTCCTTaGGGCATATACCCAGTAATGGGATTGCTGGGCCAAATAGTATTT +
Preference number: 6 (lower is better)
Translates to: TYMCLYLSNRMIYIP*GIYPVMGLLGQIVF
Trigger: AAATACTATTTGGCCCAGCAATCCCATTACTGGGTATATGCCCAAAGGAATGTAAATCATTCTGTTAGAAAGATACAGGCACATGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593765.5