RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLA2G4B (Homo sapiens)

Ensembl gene IDs: ENSG00000243708

Ensembl transcript IDs: ENST00000452633.5, ENST00000458483.4, ENST00000461382.5, ENST00000483748.5, ENST00000566076.1, ENST00000569354.1

Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGTGGACCCTGGGACCGTaGCACCTGAGCCCGAGGCTC +
Preference number: 2 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQWTLGP*HLSPRL
Trigger: GAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCA...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
3UTR-3UTR GCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTaGAACTCAGCAGCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVMTVPT*NSAARE
Trigger: TTCCCTGGCTGCTGAGTTGCAGGTGGGAACTGTCAT...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
3UTR-3UTR GCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGAGGCTCTGAAGCACTaGGTGATGACAGTTCCCACC +
Preference number: 2 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGEALKH*VMTVPT
Trigger: GGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTC...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
3UTR-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCATCCCAGCCCTCAGCCTaGACCCTGGGACCGTGCCAC +
Preference number: 2 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQASQPSA*TLGPCH
Trigger: GTGGCACGGTCCCAGGGTCCAGGCTGAGGGCTGGGA...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
3UTR-3UTR TCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCATGGGACCGTGCCACCTaGGCCCGAGGCTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAWDRAT*ARGSEA
Trigger: TGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCA...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
3UTR-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCATTACACAAATGGGCTTaGCCTCCTTACCCCACTGCA +
Preference number: 2 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQALHKWA*PPYPTA
Trigger: TGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAA...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
3UTR GCA 72 bp GTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTaGAAACTGCTGAGGCGCAAGGGAGCTCCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: VITQMGLASLPH*KLLRRKGAPSP
Trigger: AGGGCTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCCGCTGCCGCCTCCGCTaGACTGCCTGGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCRCRLR*TAWRRA
Trigger: GGCTCTGCGCCAGGCAGTGCAGCGGAGGCGGCAGCG...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTCCTGCCGGTACCGCTaGAGCTGGCTGGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCSCRYR*SWLGAS
Trigger: GCTGGCCCCCAGCCAGCTGCAGCGGTACCGGCAGGA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGCCGCCTCCGCTGCACTaGCTGGCGCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVPPPLH*LAQSLQ
Trigger: CTGGAGGCTCTGCGCCAGGCAGTGCAGCGGAGGCGG...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCCCGCCTCCGCTGCACTaGCTGGCGCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCPPPLH*LAQSLQ
Trigger: CTGGAGGCTCTGCGCCAGGCAGTGCAGCGGAGGCGG...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGCCATCAGTGGGGCCTaGGCTGCCGCCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCAISGA*AAASAA
Trigger: TGCAGCGGAGGCGGCAGCGCAGGCCCCACTGATGGC...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCCAGTGGGGCCTGCGCTaGCGCCTCCGCTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPQWGLR*RLRCTA
Trigger: GGCAGTGCAGCGGAGGCGGCAGCGCAGGCCCCACTG...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR TCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGAGGCGCCCCTCACCCTaGGGGCTCAGTGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVRRPSP*GLSEKL
Trigger: GAGCTTCTCACTGAGCCCTCAGGGTGAGGGGCGCCT...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCAGGTCTCCGTCCAGCTaGAGGGCCTGCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCRSPSS*RACLKA
Trigger: GGCCTTGAGGCAGGCCCTGCAGCTGGACGGAGACCT...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCCCGCCTCCGCTGCACTaGCTGGCGCAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPPPPLH*LAQSLQ
Trigger: CTGGAGGCTCTGCGCCAGGCAGTGCAGCGGAGGCGG...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCGCCATCAGTGGGGCCTaGGCTGCCGCCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPAISGA*AAASAA
Trigger: TGCAGCGGAGGCGGCAGCGCAGGCCCCACTGATGGC...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR CCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGCAGCGGTCCCAGAACTaGCTGGGCTCTGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVQRSQN*LGSEAQ
Trigger: CTGGGCCTCAGAGCCCAGCCAGTTCTGGGACCGCTG...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGGGTCGGAGAAGGTGTaGCACTCCCGAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCGSEKV*HSRGWS
Trigger: GCTCCAGCCTCGGGAGTGCCACACCTTCTCCGACCC...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCCCAGAACGCCATTGCTaGCGAGCCACTCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCPERHC*RATRHG
Trigger: ACCGTGGCGAGTGGCTCGTCAGCAATGGCGTTCTGG...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGCCCACTGCAAACTGCTaGGGCGCAAGGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVPTANC*GARELP
Trigger: TGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGG...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGGTAGGCGATGGGCCTaGAGGACACGAACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCGRRWA*RTRTVS
Trigger: GCTCACGGTTCGTGTCCTGCAGGCCCATCGCCTACC...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACCGCTGCCGCCTCCGCTaGACTGCCTGGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNRCRLR*TAWRRA
Trigger: GGCTCTGCGCCAGGCAGTGCAGCGGAGGCGGCAGCG...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR CCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGCGTGTCTGGAGCCTGTaGCTGCAGGCCGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQRVWSL*LQAVGS
Trigger: GCTGCCCACGGCCTGCAGCCACAGGCTCCAGACACG...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCCTGCTCCCAGCAGGCTaGGCAGTGGAAGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCLLPAG*AVEAEG
Trigger: ACCTTCCGCTTCCACTGCCCAGCCTGCTGGGAGCAG...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGGGGGCTCCTGGGACGTaGGGAAGACAAGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVGAPGT*GRQASP
Trigger: TGGTGAGGCTTGTCTTCCCCACGTCCCAGGAGCCCC...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCGGGATCCCCTGCTCCTaGCAGAACCGGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPGIPCS*QNRPRS
Trigger: GCTCCTGGGCCGGTTCTGCCAGGAGCAGGGGATCCC...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGGGCTACTGCTGTTCTTaGCCGTGCGTGTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVGYCCS*PCVSGA
Trigger: GGCTCCAGACACGCACGGTCAAGAACAGCAGTAGCC...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCACAAGCCTCACCACTTaGCCAGAGGGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCTSLTT*PEGRAL
Trigger: GAGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGT...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGTGGGACCGTGCCACCTaGGCCCGAGGCTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQWDRAT*ARGSEA
Trigger: TGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCA...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCAGCGGAAGGTGCCAGTaGCCACAGAGGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPSGRCQ*PQRPPA
Trigger: CGCAGGAGGCCTCTGTGGGCACTGGCACCTTCCGCT...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGAGTGGAAGCGGAAGGTaGCAGTGCCCACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVSGSGR*QCPQRP
Trigger: AGGCCTCTGTGGGCACTGGCACCTTCCGCTTCCACT...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCAGGTCTCCGTCCAGCTaGAGGGCCTGCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPRSPSS*RACLKA
Trigger: GGCCTTGAGGCAGGCCCTGCAGCTGGACGGAGACCT...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCGGGAACGGGATCCCCTaGTCCTGGCAGAACCGGCCC +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCGNGIP*SWQNRP
Trigger: GGGCCGGTTCTGCCAGGAGCAGGGGATCCCGTTCCC...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCGCTGCCGCCTCCGCTaGACTGCCTGGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGARCRLR*TAWRRA
Trigger: GGCTCTGCGCCAGGCAGTGCAGCGGAGGCGGCAGCG...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCGTGTCTGGAGCCTGTaGCTGCAGGCCGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVRVWSL*LQAVGS
Trigger: GCTGCCCACGGCCTGCAGCCACAGGCTCCAGACACG...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCAGGGTGTCAGCTGGTTaGGGAGCCCATCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCRVSAG*GAHPEW
Trigger: CCACTCTGGATGGGCTCCCCAACCAGCTGACACCCT...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGTCCGAGGGTGTCAGCTaGTTGGGGAGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVSEGVS*LGSPSR
Trigger: TCTGGATGGGCTCCCCAACCAGCTGACACCCTCGGA...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCTCCAGCAGGCACAGGTaGGGCTCCGAGGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPSSRHR*GSEGVS
Trigger: GCTGACACCCTCGGAGCCCCACCTGTGCCTGCTGGA...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACGGGCTCCGGGGCAGGTaGGGTCGGAGAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNGLRGR*GRRRCG
Trigger: GCCACACCTTCTCCGACCCCACCTGCCCCGGAGCCC...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTTCCCAGCCCTCAGCCTaGACCCTGGGACCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVSQPSA*TLGPCH
Trigger: GTGGCACGGTCCCAGGGTCCAGGCTGAGGGCTGGGA...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR TCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAGGCGCCCCTCACCCTaGGGGCTCAGTGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCRRPSP*GLSEKL
Trigger: GAGCTTCTCACTGAGCCCTCAGGGTGAGGGGCGCCT...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCTGGGACCGTGCCACCTaGGCCCGAGGCTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCWDRAT*ARGSEA
Trigger: TGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCA...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCACGCTCGGCCAGCTCCTaGCGGTACCGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSRSASS*RYRCSW
Trigger: CCAGCTGCAGCGGTACCGGCAGGAGCTGGCCGAGCG...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGTGTGGCTGCAGGCCGTaGGCAGCCAGAGAGTCACGT +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQCGCRP*AARESR
Trigger: ACGTGACTCTCTGGCTGCCCACGGCCTGCAGCCACA...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGTTGACCGTGCGTGTCTaGAGCCTGTGGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQLTVRV*SLWLQA
Trigger: GGCCTGCAGCCACAGGCTCCAGACACGCACGGTCAA...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGCAGGAAATTATGTGTaGCCTGGGCCAGTGGACGCC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCAGNYV*PGPVDA
Trigger: GGCGTCCACTGGCCCAGGCCACACATAATTTCCTGC...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTGCTGCTCTTCGGGGCTaGGCGAGATGGGTGGGAACG +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVAALRG*ARWVGT
Trigger: CGTTCCCACCCATCTCGCCCAGCCCCGAAGAGCAGC...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGGGCTCCGGGGCAGGTaGGGTCGGAGAAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSGLRGR*GRRRCG
Trigger: GCCACACCTTCTCCGACCCCACCTGCCCCGGAGCCC...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCCCAGCCCTCAGCCTaGACCCTGGGACCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNSQPSA*TLGPCH
Trigger: GTGGCACGGTCCCAGGGTCCAGGCTGAGGGCTGGGA...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR TCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTGCAGGACACGAACCGTaGGCAGGCAGGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVAGHEP*AGRSWT
Trigger: TGTCCAGGACCTGCCTGCTCACGGTTCGTGTCCTGC...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCCCAGAACGCCATTGCTaGCGAGCCACTCGCCACGGT +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCPERHC*RATRHG
Trigger: ACCGTGGCGAGTGGCTCGTCAGCAATGGCGTTCTGG...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTCTGCCCTTTGGTGTTaGGGGCACAGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCSALWC*GHSRWA
Trigger: TGCCCATCTACTGTGCCCTCAACACCAAAGGGCAGA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGAGTGGAAGCGGAAGGTaGCAGTGCCCACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQSGSGR*QCPQRP
Trigger: AGGCCTCTGTGGGCACTGGCACCTTCCGCTTCCACT...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACGCTCGGCCAGCTCCTaGCGGTACCGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGRSASS*RYRCSW
Trigger: CCAGCTGCAGCGGTACCGGCAGGAGCTGGCCGAGCG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTAACCGGCCCAGGAGCTaGAACTGCTGGAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVNRPRS*NCWKAP
Trigger: CGGAGCCTTCCAGCAGTTGCAGCTCCTGGGCCGGTT...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCATGGACCCTGGGACCGTaGCACCTGAGCCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSWTLGP*HLSPRL
Trigger: GAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCA...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCATGGACCCTGGGACCGTaGCACCTGAGCCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAWTLGP*HLSPRL
Trigger: GAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCA...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTTTGACCGTGCGTGTCTaGAGCCTGTGGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVLTVRV*SLWLQA
Trigger: GGCCTGCAGCCACAGGCTCCAGACACGCACGGTCAA...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTCTTCAGCAACTCAGTaGGCCCTGCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCSSATQ*ALPGPS
Trigger: AGAAGGACCTGGCAGGGCCCACTGAGTTGCTGAAGA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGTGTGGCCTGGGCCAGTaGACGCCACGTCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQCGLGQ*TPRQKI
Trigger: GATCTTCTGACGTGGCGTCCACTGGCCCAGGCCACA...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGAGGGTGTCAGCTGGTTaGGGAGCCCATCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQRVSAG*GAHPEW
Trigger: CCACTCTGGATGGGCTCCCCAACCAGCTGACACCCT...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCGGGGCTGGGCGAGATaGGTGGGAACGGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGARGWAR*VGTGSP
Trigger: AGGGGATCCCGTTCCCACCCATCTCGCCCAGCCCCG...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTGGCACTCCCGAGGCTaGAGCTGCTCTTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNWHSRG*SCSSGL
Trigger: CAGCCCCGAAGAGCAGCTCCAGCCTCGGGAGTGCCA...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTTCCCAGCCCTCAGCCTaGACCCTGGGACCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGASQPSA*TLGPCH
Trigger: GTGGCACGGTCCCAGGGTCCAGGCTGAGGGCTGGGA...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCCCTGCCAGGTCCTTCTaGGACCACTCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCPARSF*DHSGSS
Trigger: TGAGGACCCAGAGTGGTCTCAGAAGGACCTGGCAGG...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCTGCCAGGTCCTTCTaGGACCACTCTGGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVPARSF*DHSGSS
Trigger: TGAGGACCCAGAGTGGTCTCAGAAGGACCTGGCAGG...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGGTAGGGAGAGTCCGATaGAGACAGGTTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQVGRVR*RQVHLP
Trigger: GGGGAGGTGAACCTGTCTTCATCGGACTCTCCCTAC...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCATGGGACCGTGCCACCTaGGCCCGAGGCTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAWDRAT*ARGSEA
Trigger: TGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCA...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR TCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACCCCACTGCAAACTGCTaGGGCGCAAGGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNPTANC*GARELP
Trigger: TGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGG...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGGTCCTGGAGGTTGGCTaGATACAGGTTGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVVLEVG*IQVAPD
Trigger: ATCTGGAGCAACCTGTATGCAGCCAACCTCCAGGAC...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGATCCCGAGGCTGGAGCTaGTCTTCGGGGCTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGSRGWS*SSGLGE
Trigger: CTCGCCCAGCCCCGAAGAGCAGCTCCAGCCTCGGGA...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTGCTCTGAGGACTTCTaGTCTCCTGTCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCCSEDF*SPVSSS
Trigger: ACTGGAGGAGACAGGAGACCAGAAGTCCTCAGAGCA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCCTCATCAGGGGCTCCTaGGACGTGGGGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCLIRGS*DVGKTS
Trigger: GCTTGTCTTCCCCACGTCCCAGGAGCCCCTGATGAG...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTGTTGGTGAAGCAGCTTaGGTAGCCCAAGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVVGEAA*VAQAGT
Trigger: CGTGCCCGCTTGGGCTACCCAAGCTGCTTCACCAAC...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTTTGTCCAGGTTGGCCTaGTTCCTGACCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVLSRLA*FLTQRS
Trigger: GGACCGCTGGGTCAGGAACCAGGCCAACCTGGACAA...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCTGCTCTTCGGGGCTaGGCGAGATGGGTGGGAACG +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSAALRG*ARWVGT
Trigger: CGTTCCCACCCATCTCGCCCAGCCCCGAAGAGCAGC...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTTGGCACTCCCGAGGCTaGAGCTGCTCTTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGAWHSRG*SCSSGL
Trigger: CAGCCCCGAAGAGCAGCTCCAGCCTCGGGAGTGCCA...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGGGTCGGAGAAGGTGTaGCACTCCCGAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSGSEKV*HSRGWS
Trigger: GCTCCAGCCTCGGGAGTGCCACACCTTCTCCGACCC...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAGAGCCTCCAGCAGCTaGAAGGCTCCGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCRASSS*KAPWRL
Trigger: CAACCTCCACGGAGCCTTCCAGCTGCTGGAGGCTCT...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569354.1
CDS-3UTR TCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCAGGACACGAACCGTaGGCAGGCAGGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSAGHEP*AGRSWT
Trigger: TGTCCAGGACCTGCCTGCTCACGGTTCGTGTCCTGC...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGGCTGCCTGTGGATCCTaGAGTGAAAGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQAACGS*SESSGS
Trigger: GGAACCAGAGCTTTCACTTCAGGATCCACAGGCAGC...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTATCCTGCCGGCTGTTaGGGGTGGTTCTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCYPAGC*GWFFYL
Trigger: AAGATAGAAGAACCACCCTCAACAGCCGGCAGGATA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAGTCCAATGACAGGATaGGGTCCACGTCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCSPMTG*GPRPEW
Trigger: CCACTCGGGACGTGGACCTCATCCTGTCATTGGACT...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCCAACTCAGTGGGCCCTaGCAGGTCCTTCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCQLSGP*QVLLRP
Trigger: TGGTCTCAGAAGGACCTGGCAGGGCCCACTGAGTTG...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCAAACCGGCCCAGGAGCTaGAACTGCTGGAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSANRPRS*NCWKAP
Trigger: CGGAGCCTTCCAGCAGTTGCAGCTCCTGGGCCGGTT...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCACTGACCAGAGGAAAGTaGAGCACCGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSLTRGK*STAGAP
Trigger: CGGAGCCCCTGCGGTGCTGCACTTTCCTCTGGTCAG...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCACTGACCAGAGGAAAGTaGAGCACCGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSALTRGK*STAGAP
Trigger: CGGAGCCCCTGCGGTGCTGCACTTTCCTCTGGTCAG...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGAGAGCCTCCAGCAGCTaGTCCTGGTTGTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQRASSS*SWLLQT
Trigger: TGTCTGCAACAACCAGGAGCAGCTGCTGGAGGCTCT...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGGAGGCTCTGAAGCACTaGGTGATGACAGTTCCCACC +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQEALKH*VMTVPT
Trigger: GGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTC...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCTTAGAGGGTAGGCGATaGGCCTGCAGGACACGAACC +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCLEGRR*ACRTRT
Trigger: GGTTCGTGTCCTGCAGGCCCATCGCCTACCCTCTAA...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTTTAGAGGGTAGGCGATaGGCCTGCAGGACACGAACC +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVLEGRR*ACRTRT
Trigger: GGTTCGTGTCCTGCAGGCCCATCGCCTACCCTCTAA...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTGGTCCCAGAACTGGCTaGGCTCTGAGGCCCAGTATA +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVGPRTG*ALRPSI
Trigger: TATACTGGGCCTCAGAGCCCAGCCAGTTCTGGGACC...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACAGCGGTCCCAGAACTaGCTGGGCTCTGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGQRSQN*LGSEAQ
Trigger: CTGGGCCTCAGAGCCCAGCCAGTTCTGGGACCGCTG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGAAATTATGTGTGGCCTaGGCCAGTGGACGCCACGTC +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQKLCVA*ASGRHV
Trigger: GACGTGGCGTCCACTGGCCCAGGCCACACATAATTT...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCAGGCTACTGCTGTTCTTaGCCGTGCGTGTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAGYCCS*PCVSGA
Trigger: GGCTCCAGACACGCACGGTCAAGAACAGCAGTAGCC...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTGCTGCCTGTGGATCCTaGAGTGAAAGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVAACGS*SESSGS
Trigger: GGAACCAGAGCTTTCACTTCAGGATCCACAGGCAGC...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGCTGAACTCTGTGCTCTaGGGACTTCTGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQLNSVL*GLLVSC
Trigger: ACAGGAGACCAGAAGTCCTCAGAGCACAGAGTTCAG...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCAACAAGCCTCACCACTTaGCCAGAGGGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSATSLTT*PEGRAL
Trigger: GAGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGT...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAAGCCCGAGGCCCCGGTaGTGTAGGAGACGCAATCCA +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGSPRPR*CRRRNP
Trigger: TGGATTGCGTCTCCTACATCACCGGGGCCTCGGGCT...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGGTTGGCCTGGTTCCTaGCCCAGCGGTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGGWPGS*PSGPRT
Trigger: AGTTCTGGGACCGCTGGGTCAGGAACCAGGCCAACC...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCACGTCAGAAGATCGGTaGAAAACTCAGCTATCCTGC +
Preference number: 4 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCTSEDR*KTQLSC
Trigger: GCAGGATAGCTGAGTTTTTCACCGATCTTCTGACGT...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCACCCGGAAGGAGTCGCTaGCCAGAGGAAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSPGRSR*PEESAA
Trigger: TGCTGCACTTTCCTCTGGTCAGCGACTCCTTCCGGG...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTAGTGGCGCCTTTAGTTaGTCCTCGGGGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGASGAFS*SSGASC
Trigger: GCAGGATGCCCCCGAGGAGCAACTAAAGGCGCCACT...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCTCATGGGGCTCATCATaGAGCAGCGCCTCGTTGATG +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCSWGSS*SSASLM
Trigger: CATCAACGAGGCGCTGCTGCATGATGAGCCCCATGA...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCAAAGTGGTCAGGCTCTaGCCTTTGGTGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPKVVRL*PLVLRA
Trigger: TGCCCTCAACACCAAAGGGCAGAGCCTGACCACTTT...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTTCAGAAGGGGGACCTaGTCCTTGTCCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNFRRGT*SLSRLA
Trigger: GGCCAACCTGGACAAGGAGCAGGTCCCCCTTCTGAA...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTCAGTGGGGCCTGCGCTaGCGCCTCCGCTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAQWGLR*RLRCTA
Trigger: GGCAGTGCAGCGGAGGCGGCAGCGCAGGCCCCACTG...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACTGCTCCCAGCAGGCTaGGCAGTGGAAGCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGLLPAG*AVEAEG
Trigger: ACCTTCCGCTTCCACTGCCCAGCCTGCTGGGAGCAG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGGGGCTCCTGGGACGTaGGGAAGACAAGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGGAPGT*GRQASP
Trigger: TGGTGAGGCTTGTCTTCCCCACGTCCCAGGAGCCCC...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACGGTCCTCATAAAGGTTaGCCAAGGCCCAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNGPHKG*PRPRWS
Trigger: GCTCCACCTGGGCCTTGGCCAACCTTTATGAGGACC...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGTTGTTCTTGGTCACCTaGGTCTTCAGCAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVLFLVT*VFSNSV
Trigger: CACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAA...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACGGTCCCAGAACTGGCTaGGCTCTGAGGCCCAGTATA +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNGPRTG*ALRPSI
Trigger: TATACTGGGCCTCAGAGCCCAGCCAGTTCTGGGACC...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTTCCGAGGGTGTCAGCTaGTTGGGGAGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGASEGVS*LGSPSR
Trigger: TCTGGATGGGCTCCCCAACCAGCTGACACCCTCGGA...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACAGGAGCTGCAACTGCTaGAAGGCTCCGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNRSCNC*KAPWRL
Trigger: CAACCTCCACGGAGCCTTCCAGCAGTTGCAGCTCCT...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCACCTGAACCAGCCACCTaGACCTTCAGGCCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAPEPAT*TFRPSL
Trigger: TAAGGAGGGCCTGAAGGTTCAGGTGGCTGGTTCAGG...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452633.5
CDS-3UTR TCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACCCAGGAACCACAAGCTaGACTCTGTGCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNPGTTS*TLCSED
Trigger: GTCCTCAGAGCACAGAGTTCAGCTTGTGGTTCCTGG...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCTGCCCTTTGGTGTTaGGGGCACAGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNSALWC*GHSRWA
Trigger: TGCCCATCTACTGTGCCCTCAACACCAAAGGGCAGA...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTGTAGGGAGAGTCCGATaGAGACAGGTTCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGAVGRVR*RQVHLP
Trigger: GGGGAGGTGAACCTGTCTTCATCGGACTCTCCCTAC...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCGTCCTGGAGGTTGGCTaGATACAGGTTGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCVLEVG*IQVAPD
Trigger: ATCTGGAGCAACCTGTATGCAGCCAACCTCCAGGAC...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGCCATCAGTGGGGCCTaGGCTGCCGCCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAAISGA*AAASAA
Trigger: TGCAGCGGAGGCGGCAGCGCAGGCCCCACTGATGGC...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCATGACAGTTCCCACCTaGAACTCAGCAGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCMTVPT*NSAARE
Trigger: TTCCCTGGCTGCTGAGTTGCAGGTGGGAACTGTCAT...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTATGACAGTTCCCACCTaGAACTCAGCAGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVMTVPT*NSAARE
Trigger: TTCCCTGGCTGCTGAGTTGCAGGTGGGAACTGTCAT...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR GCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACGAGGCTCTGAAGCACTaGGTGATGACAGTTCCCACC +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNEALKH*VMTVPT
Trigger: GGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTC...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000569354.1
CDS-3UTR CCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACGGAATGATGGGGCAGTaGCCACAGGATCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNGMMGQ*PQDQGL
Trigger: CAGTCCTTGATCCTGTGGCCACTGCCCCATCATTCC...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCGGTCACCAGGTCCTaGTCAAAGACTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVPVTRS*SKTFSS
Trigger: GGAACTGAAAGTCTTTGACCAGGACCTGGTGACCGG...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACTCATCAGGGGCTCCTaGGACGTGGGGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGLIRGS*DVGKTS
Trigger: GCTTGTCTTCCCCACGTCCCAGGAGCCCCTGATGAG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGTTGGTGAAGCAGCTTaGGTAGCCCAAGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGVGEAA*VAQAGT
Trigger: CGTGCCCGCTTGGGCTACCCAAGCTGCTTCACCAAC...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCCCCCAAATTCAAAAGTaGTCAGGCTCTGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPPQIQK*SGSALW
Trigger: CCAAAGGGCAGAGCCTGACCACTTTTGAATTTGGGG...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACTCCACACCCACTCCTaGACCAGCCACCTGAACCTT +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGLHTHS*TSHLNL
Trigger: AAGGTTCAGGTGGCTGGTTCAGGAGTGGGTGTGGAG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452633.5
CDS-3UTR TCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCTGTGGATCCTGAAGTaGAAGCTCTGGTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVLWILK*KLWFQT
Trigger: TGTCTGGAACCAGAGCTTTCACTTCAGGATCCACAG...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCACCAGGAACCACAAGCTaGACTCTGTGCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSPGTTS*TLCSED
Trigger: GTCCTCAGAGCACAGAGTTCAGCTTGTGGTTCCTGG...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTTCAGGCCAGCCAGCTaGCCATACAGGGAAGTCATT +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNFRPAS*PYREVI
Trigger: AATGACTTCCCTGTATGGGCAGCTGGCTGGCCTGAA...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCATCCTGCCGGTACCGCTaGAGCTGGCTGGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQASCRYR*SWLGAS
Trigger: GCTGGCCCCCAGCCAGCTGCAGCGGTACCGGCAGGA...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCATCATGGGGCTCATCATaGAGCAGCGCCTCGTTGATG +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSSWGSS*SSASLM
Trigger: CATCAACGAGGCGCTGCTGCATGATGAGCCCCATGA...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGATTCAGAAGGGGGACCTaGTCCTTGTCCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGFRRGT*SLSRLA
Trigger: GGCCAACCTGGACAAGGAGCAGGTCCCCCTTCTGAA...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTAGAGCCTCCAGCAGCTaGTCCTGGTTGTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGARASSS*SWLLQT
Trigger: TGTCTGCAACAACCAGGAGCAGCTGCTGGAGGCTCT...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCAGGAATGATGGGGCAGTaGCCACAGGATCAAGGACTG +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAGMMGQ*PQDQGL
Trigger: CAGTCCTTGATCCTGTGGCCACTGCCCCATCATTCC...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCCATAATAGCTACCACTaGGATCTCATCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPHNSYH*DLILLQ
Trigger: CTGCAGGAGGATGAGATCCCAGTGGTAGCTATTATG...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCATCTTCAGCAACTCAGTaGGCCCTGCCAGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSASSATQ*ALPGPS
Trigger: AGAAGGACCTGGCAGGGCCCACTGAGTTGCTGAAGA...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCCAGTATAAGCTGTCCTaGAGGTTGGCTGCATACAGG +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCQYKLS*RLAAYR
Trigger: CCTGTATGCAGCCAACCTCCAGGACAGCTTATACTG...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACCAGAGCCAGGGATGTaGTGTCCCAATTGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGPEPGM*CPNWSQ
Trigger: TTGGGACCAATTGGGACATCACATCCCTGGCTCTGG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452633.5
CDS-3UTR TCA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACCTGTGGATCCTGAAGTaGAAGCTCTGGTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNLWILK*KLWFQT
Trigger: TGTCTGGAACCAGAGCTTTCACTTCAGGATCCACAG...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCACTGAACTCTGTGCTCTaGGGACTTCTGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSLNSVL*GLLVSC
Trigger: ACAGGAGACCAGAAGTCCTCAGAGCACAGAGTTCAG...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCACGTCAGAAGATCGGTaGAAAACTCAGCTATCCTGC +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCTSEDR*KTQLSC
Trigger: GCAGGATAGCTGAGTTTTTCACCGATCTTCTGACGT...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGAGGTTGTAGTCCAATaGCAGGATGAGGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSEVVVQ*QDEVHV
Trigger: GACGTGGACCTCATCCTGTCATTGGACTACAACCTC...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCGGTCAGCCAGACTCTaGAGGCGAAATTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGARSARL*RRNSTS
Trigger: GGAAGTTGAATTTCGCCTGCAGAGTCTGGCTGACCG...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCATTCAGGCCAGCCAGCTaGCCATACAGGGAAGTCATT +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAFRPAS*PYREVI
Trigger: AATGACTTCCCTGTATGGGCAGCTGGCTGGCCTGAA...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAGGGAACGGGATCCCCTaGTCCTGGCAGAACCGGCCC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAGNGIP*SWQNRP
Trigger: GGGCCGGTTCTGCCAGGAGCAGGGGATCCCGTTCCC...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGGCTGCTCCTGGTTGTTaGAGACATTGTAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQAAPGC*RHCNVS
Trigger: TGACACATTACAATGTCTGCAACAACCAGGAGCAGC...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCACCGGTCACCAGGTCCTaGTCAAAGACTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAPVTRS*SKTFSS
Trigger: GGAACTGAAAGTCTTTGACCAGGACCTGGTGACCGG...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTTTGTTCTTGGTCACCTaGGTCTTCAGCAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: PGTVPPEPEALKHCVMTVLFLVT*VFSNSV
Trigger: CACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAA...AACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCGGGATCCCCTGCTCCTaGCAGAACCGGCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGGIPCS*QNRPRS
Trigger: GCTCCTGGGCCGGTTCTGCCAGGAGCAGGGGATCCC...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCACGCATCAAACAGTACTaGCAACACAGGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSARIKQY*QHRVIS
Trigger: GGAGATGACCCTGTGTTGTCAGTACTGTTTGATGCG...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGAGGTTGTAGTCCAATaGCAGGATGAGGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGEVVVQ*QDEVHV
Trigger: GACGTGGACCTCATCCTGTCATTGGACTACAACCTC...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACGGTCAGCCAGACTCTaGAGGCGAAATTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGRSARL*RRNSTS
Trigger: GGAAGTTGAATTTCGCCTGCAGAGTCTGGCTGACCG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCGCTGCTCCTGGTTGTTaGAGACATTGTAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCAAPGC*RHCNVS
Trigger: TGACACATTACAATGTCTGCAACAACCAGGAGCAGC...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCACTTCTGAGACCACTCTaGGTCCTCATAAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSLLRPL*VLIKVG
Trigger: GCCAACCTTTATGAGGACCCAGAGTGGTCTCAGAAG...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCACAGTATAAGCTGTCCTaGAGGTTGGCTGCATACAGG +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAQYKLS*RLAAYR
Trigger: CCTGTATGCAGCCAACCTCCAGGACAGCTTATACTG...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCATCCAGCAGGCACAGGTaGGGCTCCGAGGGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQASSRHR*GSEGVS
Trigger: GCTGACACCCTCGGAGCCCCACCTGTGCCTGCTGGA...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCATTACACAAATGGGCTTaGCCTCCTTACCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSLHKWA*PPYPTA
Trigger: TGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAA...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGACGCATCAAACAGTACTaGCAACACAGGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGRIKQY*QHRVIS
Trigger: GGAGATGACCCTGTGTTGTCAGTACTGTTTGATGCG...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAAGCCCGAGGCCCCGGTaGTGTAGGAGACGCAATCCA +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQASPRPR*CRRRNP
Trigger: TGGATTGCGTCTCCTACATCACCGGGGCCTCGGGCT...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTCCCGGAAGGAGTCGCTaGCCAGAGGAAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAPGRSR*PEESAA
Trigger: TGCTGCACTTTCCTCTGGTCAGCGACTCCTTCCGGG...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCGGTAGGCGATGGGCCTaGAGGACACGAACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGGRRWA*RTRTVS
Trigger: GCTCACGGTTCGTGTCCTGCAGGCCCATCGCCTACC...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAAAAACTCAGCTATCCTaGCGGCTGTTGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGKTQLS*RLLRVV
Trigger: AACCACCCTCAACAGCCGGCAGGATAGCTGAGTTTT...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGGCCTCCCGTTGATCTaGGAGCTTGTGATCATGGGG +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAGLPLI*ELVIMG
Trigger: CCCCATGATCACAAGCTCTCAGATCAACGGGAGGCC...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTAGTCCAATGACAGGATaGGGTCCACGTCCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTASPMTG*GPRPEW
Trigger: CCACTCGGGACGTGGACCTCATCCTGTCATTGGACT...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCACGAATACTCAGCTCCTaGTCCCAGCAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQARILSS*SQQAGQ
Trigger: CTGCCCAGCCTGCTGGGAGCAGGAGCTGAGTATTCG...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAGTGGCGCCTTTAGTTaGTCCTCGGGGGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGSGAFS*SSGASC
Trigger: GCAGGATGCCCCCGAGGAGCAACTAAAGGCGCCACT...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTCAACTCAGTGGGCCCTaGCAGGTCCTTCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAQLSGP*QVLLRP
Trigger: TGGTCTCAGAAGGACCTGGCAGGGCCCACTGAGTTG...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTTGGCTGCATACAGGTTaGTCCAGATACCTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: QMGLASLPHCKLLRRKGAWLHTG*SRYLLR
Trigger: TCTTAGAAGGTATCTGGAGCAACCTGTATGCAGCCA...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGCCTCCTTACCCCACTaGAAACTGCTGAGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAASLPH*KLLRRK
Trigger: CTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGC...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCATTGTCCAGGTTGGCCTaGTTCCTGACCCAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQALSRLA*FLTQRS
Trigger: GGACCGCTGGGTCAGGAACCAGGCCAACCTGGACAA...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCTGTGGCCTGGGCCAGTaGACGCCACGTCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGCGLGQ*TPRQKI
Trigger: GATCTTCTGACGTGGCGTCCACTGGCCCAGGCCACA...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCGGCCTCCCGTTGATCTaGGAGCTTGTGATCATGGGG +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGGLPLI*ELVIMG
Trigger: CCCCATGATCACAAGCTCTCAGATCAACGGGAGGCC...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAGCCTCCTTACCCCACTaGAAACTGCTGAGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAASLPH*KLLRRK
Trigger: CTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGC...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAGGTCCTCATAAAGGTTaGCCAAGGCCCAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAGPHKG*PRPRWS
Trigger: GCTCCACCTGGGCCTTGGCCAACCTTTATGAGGACC...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAGCAGGAAATTATGTGTaGCCTGGGCCAGTGGACGCC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAAGNYV*PGPVDA
Trigger: GGCGTCCACTGGCCCAGGCCACACATAATTTCCTGC...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAGGAGCTGCAACTGCTaGAAGGCTCCGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGRSCNC*KAPWRL
Trigger: CAACCTCCACGGAGCCTTCCAGCAGTTGCAGCTCCT...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCAATTTGTATGAGTCTGTaGTGTATCAAGTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: EPEALKHCVMTVPTCNSAICMSL*CIKCSN
Trigger: GTTGGAGCACTTGATACATCACAGACTCATACAAAT...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452633.5
CDS-3UTR GCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTATGACAGTTCCCACCTaGAACTCAGCAGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAMTVPT*NSAARE
Trigger: TTCCCTGGCTGCTGAGTTGCAGGTGGGAACTGTCAT...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCGAGGCTCTGAAGCACTaGGTGATGACAGTTCCCACC +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGEALKH*VMTVPT
Trigger: GGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTC...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAAAATTATGTGTGGCCTaGGCCAGTGGACGCCACGTC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAKLCVA*ASGRHV
Trigger: GACGTGGCGTCCACTGGCCCAGGCCACACATAATTT...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAAAGTGGTCAGGCTCTaGCCTTTGGTGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGKVVRL*PLVLRA
Trigger: TGCCCTCAACACCAAAGGGCAGAGCCTGACCACTTT...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCTGCTCTGAGGACTTCTaGTCTCCTGTCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGCSEDF*SPVSSS
Trigger: ACTGGAGGAGACAGGAGACCAGAAGTCCTCAGAGCA...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTTTTGGGTGATTACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTCCCCAAATTCAAAAGTaGTCAGGCTCTGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VLGDYTNGLGLLTPLQTAPQIQK*SGSALW
Trigger: CCAAAGGGCAGAGCCTGACCACTTTTGAATTTGGGG...AGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAATCACCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR TCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCATATCCTGCCGGCTGTTaGGGGTGGTTCTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAYPAGC*GWFFYL
Trigger: AAGATAGAAGAACCACCCTCAACAGCCGGCAGGATA...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAAAACTCAGCTATCCTaGCGGCTGTTGAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGKTQLS*RLLRVV
Trigger: AACCACCCTCAACAGCCGGCAGGATAGCTGAGTTTT...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCACTTCTGAGACCACTCTaGGTCCTCATAAAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQALLRPL*VLIKVG
Trigger: GCCAACCTTTATGAGGACCCAGAGTGGTCTCAGAAG...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCTTACACAAATGGGCTTaGCCTCCTTACCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGLHKWA*PPYPTA
Trigger: TGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAA...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CCA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCACATAATAGCTACCACTaGGATCTCATCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAHNSYH*DLILLQ
Trigger: CTGCAGGAGGATGAGATCCCAGTGGTAGCTATTATG...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR GCA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCTGGCTGCATACAGGTTaGTCCAGATACCTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGWLHTG*SRYLLR
Trigger: TCTTAGAAGGTATCTGGAGCAACCTGTATGCAGCCA...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS CCA 90 bp TGTGGCACTCCCGAGGCTGGAGCTGCTCTTCGGGGCTGGGCGAGATaGGTGGGAACGGGATCCCCTGCTCCTGGCAGAACCGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: CGTPEAGAALRGWAR*VGTGSPAPGRTGPG
Trigger: TCCTGGGCCGGTTCTGCCAGGAGCAGGGGATCCCGTTCCCACCCATCTCGCCCAGCCCCGAAGAGCAGCTCCAGCCTCGGGAGTGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 90 bp CAGCAGCGCCTCGTTGATGAGGGCCCACAGGTTGGTGAAGCAGCTTaGGTAGCCCAAGCGGGCACGCTCGGCCAGCTCCTGCCGGTACCG +
Preference number: 5 (lower is better)
Translates to: QQRLVDEGPQVGEAA*VAQAGTLGQLLPVP
Trigger: CGGTACCGGCAGGAGCTGGCCGAGCGTGCCCGCTTGGGCTACCCAAGCTGCTTCACCAACCTGTGGGCCCTCATCAACGAGGCGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 90 bp CGGAGAAGGTGTGGCACTCCCGAGGCTGGAGCTGCTCTTCGGGGCTaGGCGAGATGGGTGGGAACGGGATCCCCTGCTCCTGGCAGAACC +
Preference number: 5 (lower is better)
Translates to: RRRCGTPEAGAALRG*ARWVGTGSPAPGRT
Trigger: GGTTCTGCCAGGAGCAGGGGATCCCGTTCCCACCCATCTCGCCCAGCCCCGAAGAGCAGCTCCAGCCTCGGGAGTGCCACACCTTCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 90 bp CAGGGTGTGACCCACGGAGAAGCGGGAAGCAGGCCCCTCCCTTTGTaGCCTGGGTCCCAGCCCCATCCAGGCGCCTTGCTTCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: QGVTHGEAGSRPLPL*PGSQPHPGALLPSL
Trigger: CAGGGAAGGAAGCAAGGCGCCTGGATGGGGCTGGGACCCAGGCCACAAAGGGAGGGGCCTGCTTCCCGCTTCTCCGTGGGTCACACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS-3UTR CAA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGCCACCAGAACGCCATaGCTGACGAGCCACTCGCCA +
Preference number: 5 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCATRTP*LTSHSP
Trigger: TGGCGAGTGGCTCGTCAGCAATGGCGTTCTGGTGGC...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGAGGGGGACCTGCTCCTaGTCCAGGTTGGCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVRGTCS*SRLAWF
Trigger: GAACCAGGCCAACCTGGACAAGGAGCAGGTCCCCCT...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS CCA 90 bp TGTGGCCTGGGTCCCAGCCCCATCCAGGCGCCTTGCTTCCTTCCCTaGGAGGCCAGTACCTGGGACGTGGGGAAGACAAGCCTCACCACT +
Preference number: 5 (lower is better)
Translates to: CGLGPSPIQAPCFLP*EASTWDVGKTSLTT
Trigger: AGTGGTGAGGCTTGTCTTCCCCACGTCCCAGGTACTGGCCTCCCAGGGAAGGAAGCAAGGCGCCTGGATGGGGCTGGGACCCAGGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS-3UTR CAA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTGCTCCTTGTCCAGGTaGGCCTGGTTCCTGACCCAG +
Preference number: 5 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCCSLSR*AWFLTQ
Trigger: CTGGGTCAGGAACCAGGCCAACCTGGACAAGGAGCA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS CCA 90 bp GGTACCGCTGCAGCTGGCTGGGGGCCAGCACACCCAGCTTGTTCTTaGTCACCTGGGTCTTCAGCAACTCAGTGGGCCCTGCCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: GTAAAGWGPAHPACS*SPGSSATQWALPGP
Trigger: AGGACCTGGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGCCCCCAGCCAGCTGCAGCGGTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS-3UTR CAA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGGCCACCAGAACGCCATaGCTGACGAGCCACTCGCCA +
Preference number: 5 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQATRTP*LTSHSP
Trigger: TGGCGAGTGGCTCGTCAGCAATGGCGTTCTGGTGGC...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCTGCAGCAGCGCCTCGTaGATGAGGGCCCACAGGTTG +
Preference number: 5 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPCSSAS*MRAHRL
Trigger: CAACCTGTGGGCCCTCATCAACGAGGCGCTGCTGCA...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp GGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCCCAGGAGGGTGTCAGCTGGTaGGGGAGCCCATCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GLGLLTPLQTAEAQGSSQEGVSW*GSPSRV
Trigger: CACTCTGGATGGGCTCCCCAACCAGCTGACACCCTC...CTGGGAGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS TCA 90 bp CCTCATAAAGGTTGGCCAAGGCCCAGGTGGAGCCCGAGGCCCCGGTaGTGTAGGAGACGCAATCCAAGAGGCCCAGCTCCTTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PHKGWPRPRWSPRPR*CRRRNPRGPAPSGQ
Trigger: CTGGCCTGAAGGAGCTGGGCCTCTTGGATTGCGTCTCCTACATCACCGGGGCCTCGGGCTCCACCTGGGCCTTGGCCAACCTTTATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 90 bp GCAACTGCTGGAAGGCTCCGTGGAGGTTGTAGTCCAATGACAGGATaGGGTCCACGTCCCGAGTGGGCTGCAGGAGGGGCAGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ATAGRLRGGCSPMTG*GPRPEWAAGGAGSW
Trigger: CCAGCTGCCTGCCCCTCCTGCAGCCCACTCGGGACGTGGACCTCATCCTGTCATTGGACTACAACCTCCACGGAGCCTTCCAGCAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS GCA 90 bp CAGTCAGAGGGGGTCACTAGGTCCTTAGAGGGTAGGCGATGGGCCTaGAGGACACGAACCGTGAGCAGGCAGGTCCTGGACACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: QSEGVTRSLEGRRWA*RTRTVSRQVLDTSA
Trigger: GGCAGAGGTGTCCAGGACCTGCCTGCTCACGGTTCGTGTCCTGCAGGCCCATCGCCTACCCTCTAAGGACCTAGTGACCCCCTCTGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS GCA 90 bp GGCTGGAAACAGGAACCAGAGCAGAGAGGCTGGGGACGGTATCTCTaGCCACAGAACCCATCTTGCTGCGTGGCCTGGAGGGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: GWKQEPEQRGWGRYL*PQNPSCCVAWRAPP
Trigger: GGGAGGTGCCCTCCAGGCCACGCAGCAAGATGGGTTCTGTGGGCAGAGATACCGTCCCCAGCCTCTCTGCTCTGGTTCCTGTTTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS CCA 90 bp TCCAGGCGCCTTGCTTCCTTCCCTGGGAGGCCAGTACCTGGGACGTaGGGAAGACAAGCCTCACCACTTGACCAGAGGGCAGGGCACTCA +
Preference number: 5 (lower is better)
Translates to: SRRLASFPGRPVPGT*GRQASPLDQRAGHS
Trigger: TGAGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGTCTTCCCCACGTCCCAGGTACTGGCCTCCCAGGGAAGGAAGCAAGGCGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS-3UTR CAA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTCCTGTCTCCTCCAGTaGAACGTGCAAGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCSCLLQ*NVQAGE
Trigger: CTCTCCTGCTTGCACGTTCAACTGGAGGAGACAGGA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS TCA 90 bp CTCATCAGGGGCTCCTGGGACGTGGGGAAGACAAGCCTCACCACTTaGCCAGAGGGCAGGGCACTCAGTGGCGCCTTTAGTTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LIRGSWDVGKTSLTT*PEGRALSGAFSCSS
Trigger: CGAGGAGCAACTAAAGGCGCCACTGAGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGTCTTCCCCACGTCCCAGGAGCCCCTGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS TCA 90 bp CAGGAGCTGCAACTGCTGGAAGGCTCCGTGGAGGTTGTAGTCCAATaGCAGGATGAGGTCCACGTCCCGAGTGGGCTGCAGGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QELQLLEGSVEVVVQ*QDEVHVPSGLQEGQ
Trigger: CTGCCCCTCCTGCAGCCCACTCGGGACGTGGACCTCATCCTGTCATTGGACTACAACCTCCACGGAGCCTTCCAGCAGTTGCAGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 90 bp TGGGAGGCCAGTACCTGGGACGTGGGGAAGACAAGCCTCACCACTTaGCCAGAGGGCAGGGCACTCAGTGGCGCCTTTAGTTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: WEASTWDVGKTSLTT*PEGRALSGAFSCSS
Trigger: CGAGGAGCAACTAAAGGCGCCACTGAGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGTCTTCCCCACGTCCCAGGTACTGGCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS CCA 90 bp CTTCAGCAACTCAGTGGGCCCTGCCAGGTCCTTCTGAGACCACTCTaGGTCCTCATAAAGGTTGGCCAAGGCCCAGGTGGAGCCCGAGGC +
Preference number: 5 (lower is better)
Translates to: LQQLSGPCQVLLRPL*VLIKVGQGPGGARG
Trigger: GCCTCGGGCTCCACCTGGGCCTTGGCCAACCTTTATGAGGACCCAGAGTGGTCTCAGAAGGACCTGGCAGGGCCCACTGAGTTGCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS-3UTR CAA 90 bp GGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCCATACAGGGAAGTCATaGCCCGGATCCCACCACCAG +
Preference number: 5 (lower is better)
Translates to: GTVPPEPEALKHCVMTVPHTGKS*PGSHHQ
Trigger: CTGGTGGTGGGATCCGGGCAATGACTTCCCTGTATG...GGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCGCCAGCACACCCAGCTaGTTCTTGGTCACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCASTPS*FLVTWV
Trigger: GACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGC...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp GTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCTGCTCCTTGTCCAGGTaGGCCTGGTTCCTGACCCAG +
Preference number: 5 (lower is better)
Translates to: VPPEPEALKHCVMTVPTCCSLSR*AWFLTQ
Trigger: CTGGGTCAGGAACCAGGCCAACCTGGACAAGGAGCA...GCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp AGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATTACACAAATGGGCTaGGCCTCCTTACCCCACTGC +
Preference number: 5 (lower is better)
Translates to: SLDPGTVPPEPEALKHCVITQMG*ASLPHC
Trigger: GCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAAT...CACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS CCA 90 bp TCCTTGTCCAGGTTGGCCTGGTTCCTGACCCAGCGGTCCCAGAACTaGCTGGGCTCTGAGGCCCAGTATAAGCTGTCCTGGAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SLSRLAWFLTQRSQN*LGSEAQYKLSWRLA
Trigger: AGCCAACCTCCAGGACAGCTTATACTGGGCCTCAGAGCCCAGCCAGTTCTGGGACCGCTGGGTCAGGAACCAGGCCAACCTGGACAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS-3UTR CAA 90 bp CCACCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACGCCAGCACACCCAGCTaGTTCTTGGTCACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: PPEPEALKHCVMTVPTCNASTPS*FLVTWV
Trigger: GACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGC...GTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCATGCAGCAGCGCCTCGTaGATGAGGGCCCACAGGTTG +
Preference number: 5 (lower is better)
Translates to: EPEALKHCVMTVPTCNSACSSAS*MRAHRL
Trigger: CAACCTGTGGGCCCTCATCAACGAGGCGCTGCTGCA...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAAGGGGGACCTGCTCCTaGTCCAGGTTGGCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSRGTCS*SRLAWF
Trigger: GAACCAGGCCAACCTGGACAAGGAGCAGGTCCCCCT...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGAGGGTGTCAGCTGGTaGGGGAGCCCATCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSEGVSW*GSPSRV
Trigger: CACTCTGGATGGGCTCCCCAACCAGCTGACACCCTC...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS TCA 90 bp GGTTGGCTGCATACAGGTTGCTCCAGATACCTGAAAGAGCGGCCGTaGGGGAAGAGGGCCCCCGACTCTTGTCCCAATCCTACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: GWLHTGCSRYLKERP*GKRAPDSCPNPTLP
Trigger: GGGAAGGGTAGGATTGGGACAAGAGTCGGGGGCCCTCTTCCCTCACGGCCGCTCTTTCAGGTATCTGGAGCAACCTGTATGCAGCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566076.1
CDS-3UTR CAA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTGACAAGCCTCACCACTaGACCAGAGGGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: QMGLASLPHCKLLRRKGADKPHH*TRGQGT
Trigger: AGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGTC...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp CTCAGCCTGGACCCTGGGACCGTGCCACCTGAGCCCGAGGCTCTGAAGCACTGCTTGGCTGCATACAGGTaGCTCCAGATACCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: LSLDPGTVPPEPEALKHCLAAYR*LQIPSK
Trigger: CTTAGAAGGTATCTGGAGCAACCTGTATGCAGCCAA...GCAGTGCTTCAGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS TCA 90 bp GATGGGCAGAGGGTTCTGGCCATGACTCAGGGCCTCCCGTTGATCTaGGAGCTTGTGATCATGGGGCTCATCATGCAGCAGCGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: DGQRVLAMTQGLPLI*ELVIMGLIMQQRLV
Trigger: AACGAGGCGCTGCTGCATGATGAGCCCCATGATCACAAGCTCTCAGATCAACGGGAGGCCCTGAGTCATGGCCAGAACCCTCTGCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 90 bp CGGACCCTCACAGGACCCAGGAACCACAAGCTGAACTCTGTGCTCTaGGGCTGGAAACAGGAACCAGAGCAGAGAGGCTGGGGACGGTAT +
Preference number: 5 (lower is better)
Translates to: RTLTGPRNHKLNSVL*GWKQEPEQRGWGRY
Trigger: ATACCGTCCCCAGCCTCTCTGCTCTGGTTCCTGTTTCCAGCCTCAGAGCACAGAGTTCAGCTTGTGGTTCCTGGGTCCTGTGAGGGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS-3UTR CAA 90 bp CCTGAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCACATACAGGGAAGTCATaGCCCGGATCCCACCACCAG +
Preference number: 5 (lower is better)
Translates to: PEPEALKHCVMTVPTCNSHTGKS*PGSHHQ
Trigger: CTGGTGGTGGGATCCGGGCAATGACTTCCCTGTATG...TGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS TCA 90 bp CACAGGATCAAGGACTGTCAGCTTTCTAACCCAGAGCCAGGGATGTaGTGTCCCAATTGGTCCCAAGTCCCTCCTACCCGCCGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: HRIKDCQLSNPEPGM*CPNWSQVPPTRRLC
Trigger: GCAGAGGCGGCGGGTAGGAGGGACTTGGGACCAATTGGGACATCACATCCCTGGCTCTGGGTTAGAAAGCTGACAGTCCTTGATCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452633.5
CDS GCA 90 bp CAGCTTGTTCTTGGTCACCTGGGTCTTCAGCAACTCAGTGGGCCCTaGCAGGTCCTTCTGAGACCACTCTGGGTCCTCATAAAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: QLVLGHLGLQQLSGP*QVLLRPLWVLIKVG
Trigger: GCCAACCTTTATGAGGACCCAGAGTGGTCTCAGAAGGACCTGGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 90 bp GCACACCCAGCTTGTTCTTGGTCACCTGGGTCTTCAGCAACTCAGTaGGCCCTGCCAGGTCCTTCTGAGACCACTCTGGGTCCTCATAAA +
Preference number: 5 (lower is better)
Translates to: AHPACSWSPGSSATQ*ALPGPSETTLGPHK
Trigger: TTTATGAGGACCCAGAGTGGTCTCAGAAGGACCTGGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTGGGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS-3UTR CAA 90 bp CAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGAGCTCTATCCTGCCGGCTGTaGAGGGTGGTTCTTCTATCT +
Preference number: 5 (lower is better)
Translates to: QMGLASLPHCKLLRRKGALSCRL*RVVLLS
Trigger: AGATAGAAGAACCACCCTCAACAGCCGGCAGGATAG...AGCTCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS GCA 90 bp CCATTCAGGGACCCCACCCTCGCAGCACCCTGGCTGCTGCTGGTCTaGACTTCATTACCTGGGCCCTTGAGATTGTATTCCCTTAACAAA +
Preference number: 5 (lower is better)
Translates to: PFRDPTLAAPWLLLV*TSLPGPLRLYSLNK
Trigger: TTTGTTAAGGGAATACAATCTCAAGGGCCCAGGTAATGAAGTGCAGACCAGCAGCAGCCAGGGTGCTGCGAGGGTGGGGTCCCTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS CCA 90 bp GTGGAAATGGAGGCCACGCAGGAAATTATGTGTGGCCTGGGCCAGTaGACGCCACGTCAGAAGATCGGTGAAAAACTCAGCTATCCTGCC +
Preference number: 5 (lower is better)
Translates to: VEMEATQEIMCGLGQ*TPRQKIGEKLSYPA
Trigger: GGCAGGATAGCTGAGTTTTTCACCGATCTTCTGACGTGGCGTCCACTGGCCCAGGCCACACATAATTTCCTGCGTGGCCTCCATTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS-3UTR CAA 90 bp GAGCCCGAGGCTCTGAAGCACTGCGTGATGACAGTTCCCACCTGCAACTCAGCAAGTTCCATGACATTCTaGAGCTGCCTGTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: EPEALKHCVMTVPTCNSASSMTF*SCLWIL
Trigger: CAGGATCCACAGGCAGCTCAAGAATGTCATGGAACT...TGCTGAGTTGCAGGTGGGAACTGTCATCACGCAGTGCTTCAGAGCCTCGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS TCA 90 bp AATTATGTGTGGCCTGGGCCAGTGGACGCCACGTCAGAAGATCGGTaGAAAACTCAGCTATCCTGCCGGCTGTTGAGGGTGGTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: NYVWPGPVDATSEDR*KTQLSCRLLRVVLL
Trigger: TAGAAGAACCACCCTCAACAGCCGGCAGGATAGCTGAGTTTTTCACCGATCTTCTGACGTGGCGTCCACTGGCCCAGGCCACACATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS CCA 90 bp AGAACTGGCTGGGCTCTGAGGCCCAGTATAAGCTGTCCTGGAGGTTaGCTGCATACAGGTTGCTCCAGATACCTTCTAAGAAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: RTGWALRPSISCPGG*LHTGCSRYLLRSRC
Trigger: GCATCTGCTTCTTAGAAGGTATCTGGAGCAACCTGTATGCAGCCAACCTCCAGGACAGCTTATACTGGGCCTCAGAGCCCAGCCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS-3UTR CAA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCGACAAGCCTCACCACTaGACCAGAGGGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGDKPHH*TRGQGT
Trigger: AGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGTC...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp ACACAAATGGGCTTGGCCTCCTTACCCCACTGCAAACTGCTGAGGCGCAAGGGATTGGCTGCATACAGGTaGCTCCAGATACCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: TQMGLASLPHCKLLRRKGLAAYR*LQIPSK
Trigger: CTTAGAAGGTATCTGGAGCAACCTGTATGCAGCCAA...TCCCTTGCGCCTCAGCAGTTTGCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS CCA 90 bp TCAAACAGTACTGACAACACAGGGTCATCTCCGGTCACCAGGTCCTaGTCAAAGACTTTCAGTTCCATGACATTCTTGAGCTGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SNSTDNTGSSPVTRS*SKTFSSMTFLSCLW
Trigger: CCACAGGCAGCTCAAGAATGTCATGGAACTGAAAGTCTTTGACCAGGACCTGGTGACCGGAGATGACCCTGTGTTGTCAGTACTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS-3UTR CAA 90 bp TGTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCCTATCCTGCCGGCTGTaGAGGGTGGTTCTTCTATCT +
Preference number: 5 (lower is better)
Translates to: CDVSSAPTTQGSAEGKTGLSCRL*RVVLLS
Trigger: AGATAGAAGAACCACCCTCAACAGCCGGCAGGATAG...GCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAATTACACAAATGGGCTaGGCCTCCTTACCCCACTGC +
Preference number: 5 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQAITQMG*ASLPHC
Trigger: GCAGTGGGGTAAGGAGGCCAAGCCCATTTGTGTAAT...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS-3UTR CAA 90 bp GTGATGTATCAAGTGCTCCAACTACTCAAGGTAGCGCAGAAGGGAAAACAGGCAAGTTCCATGACATTCTaGAGCTGCCTGTGGATCCTG +
Preference number: 5 (lower is better)
Translates to: VMYQVLQLLKVAQKGKQASSMTF*SCLWIL
Trigger: CAGGATCCACAGGCAGCTCAAGAATGTCATGGAACT...TGCCTGTTTTCCCTTCTGCGCTACCTTGAGTAGTTGGAGCACTTGATACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS GCA 72 bp TCGGGGCTGGGCGAGATGGGTGGGAACGGGATCCCCTaGTCCTGGCAGAACCGGCCCAGGAGCTGCAACTGC +
Preference number: 6 (lower is better)
Translates to: SGLGEMGGNGIP*SWQNRPRSCNC
Trigger: GCAGTTGCAGCTCCTGGGCCGGTTCTGCCAGGAGCAGGGGATCCCGTTCCCACCCATCTCGCCCAGCCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS GCA 72 bp GGGTCGGAGAAGGTGTGGCACTCCCGAGGCTGGAGCTaGTCTTCGGGGCTGGGCGAGATGGGTGGGAACGGG +
Preference number: 6 (lower is better)
Translates to: GSEKVWHSRGWS*SSGLGEMGGNG
Trigger: CCCGTTCCCACCCATCTCGCCCAGCCCCGAAGAGCAGCTCCAGCCTCGGGAGTGCCACACCTTCTCCGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 72 bp CCCGAGGCTGGAGCTGCTCTTCGGGGCTGGGCGAGATaGGTGGGAACGGGATCCCCTGCTCCTGGCAGAACC +
Preference number: 6 (lower is better)
Translates to: PEAGAALRGWAR*VGTGSPAPGRT
Trigger: GGTTCTGCCAGGAGCAGGGGATCCCGTTCCCACCCATCTCGCCCAGCCCCGAAGAGCAGCTCCAGCCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 72 bp GAGGAAAGTGCAGCACCGCAGGGGCTCCGGGGCAGGTaGGGTCGGAGAAGGTGTGGCACTCCCGAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: EESAAPQGLRGR*GRRRCGTPEAG
Trigger: TCCAGCCTCGGGAGTGCCACACCTTCTCCGACCCCACCTGCCCCGGAGCCCCTGCGGTGCTGCACTTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CAA 72 bp GTGACCCACGGAGAAGCGGGAAGCAGGCCCCTCCCTTaGTGGCCTGGGTCCCAGCCCCATCCAGGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: VTHGEAGSRPLP*WPGSQPHPGAL
Trigger: CAAGGCGCCTGGATGGGGCTGGGACCCAGGCCACAAAGGGAGGGGCCTGCTTCCCGCTTCTCCGTGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS CAA 90 bp GCTCAGGGTGTGACCCACGGAGAAGCGGGAAGCAGGCCCCTCCCTTaGTGGCCTGGGTCCCAGCCCCATCCAGGCGCCTTGCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: AQGVTHGEAGSRPLP*WPGSQPHPGALLPS
Trigger: GGAAGGAAGCAAGGCGCCTGGATGGGGCTGGGACCCAGGCCACAAAGGGAGGGGCCTGCTTCCCGCTTCTCCGTGGGTCACACCCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS TCA 72 bp GGTTGGCCAAGGCCCAGGTGGAGCCCGAGGCCCCGGTaGTGTAGGAGACGCAATCCAAGAGGCCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GWPRPRWSPRPR*CRRRNPRGPAP
Trigger: AGGAGCTGGGCCTCTTGGATTGCGTCTCCTACATCACCGGGGCCTCGGGCTCCACCTGGGCCTTGGCCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CAA 90 bp CGGTACCGCTGCAGCTGGCTGGGGGCCAGCACACCCAGCTTGTTCTaGGTCACCTGGGTCTTCAGCAACTCAGTGGGCCCTGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RYRCSWLGASTPSLF*VTWVFSNSVGPARS
Trigger: GGACCTGGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGCCCCCAGCCAGCTGCAGCGGTACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CAA 90 bp TCCTGCCGGTACCGCTGCAGCTGGCTGGGGGCCAGCACACCCAGCTaGTTCTTGGTCACCTGGGTCTTCAGCAACTCAGTGGGCCCTGCC +
Preference number: 6 (lower is better)
Translates to: SCRYRCSWLGASTPS*FLVTWVFSNSVGPA
Trigger: GGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGCCCCCAGCCAGCTGCAGCGGTACCGGCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 72 bp AGCAGGAGAGCTCCCGGGCCACCAGAACGCCATTGCTaGCGAGCCACTCGCCACGGTCAGCCAGACTCTGCA +
Preference number: 6 (lower is better)
Translates to: SRRAPGPPERHC*RATRHGQPDSA
Trigger: TGCAGAGTCTGGCTGACCGTGGCGAGTGGCTCGTCAGCAATGGCGTTCTGGTGGCCCGGGAGCTCTCCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS TCA 72 bp TGCTGCGTGGCCTGGAGGGCACCTCCCTCTCCCCGCTaGAATGGTCTGGTGGAGATGGATCCCCCACCACAG +
Preference number: 6 (lower is better)
Translates to: CCVAWRAPPSPR*NGLVEMDPPPQ
Trigger: CTGTGGTGGGGGATCCATCTCCACCAGACCATTTCAGCGGGGAGAGGGAGGTGCCCTCCAGGCCACGCAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS GCA 72 bp TCCTCGGGGGCATCCTGCAGGCGAATACTCAGCTCCTaGTCCCAGCAGGCTGGGCAGTGGAAGCGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: SSGASCRRILSS*SQQAGQWKRKV
Trigger: CACCTTCCGCTTCCACTGCCCAGCCTGCTGGGAGCAGGAGCTGAGTATTCGCCTGCAGGATGCCCCCGAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
ENST00000483748.5
CDS CCA 72 bp CTCGTTGATGAGGGCCCACAGGTTGGTGAAGCAGCTTaGGTAGCCCAAGCGGGCACGCTCGGCCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: LVDEGPQVGEAA*VAQAGTLGQLL
Trigger: CAGGAGCTGGCCGAGCGTGCCCGCTTGGGCTACCCAAGCTGCTTCACCAACCTGTGGGCCCTCATCAACGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CAA 72 bp TGCAAGCAGGAGAGCTCCCGGGCCACCAGAACGCCATaGCTGACGAGCCACTCGCCACGGTCAGCCAGACTC +
Preference number: 6 (lower is better)
Translates to: CKQESSRATRTP*LTSHSPRSARL
Trigger: GAGTCTGGCTGACCGTGGCGAGTGGCTCGTCAGCAATGGCGTTCTGGTGGCCCGGGAGCTCTCCTGCTTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452633.5
ENST00000458483.4
CDS GCA 72 bp GGGGTCACTAGGTCCTTAGAGGGTAGGCGATGGGCCTaGAGGACACGAACCGTGAGCAGGCAGGTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: GVTRSLEGRRWA*RTRTVSRQVLD
Trigger: GTCCAGGACCTGCCTGCTCACGGTTCGTGTCCTGCAGGCCCATCGCCTACCCTCTAAGGACCTAGTGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS CCA 72 bp CTGGGGGCCAGCACACCCAGCTTGTTCTTGGTCACCTaGGTCTTCAGCAACTCAGTGGGCCCTGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: LGASTPSLFLVT*VFSNSVGPARS
Trigger: GGACCTGGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 72 bp GGCTCCTGGGACGTGGGGAAGACAAGCCTCACCACTTaGCCAGAGGGCAGGGCACTCAGTGGCGCCTTTAGT +
Preference number: 6 (lower is better)
Translates to: GSWDVGKTSLTT*PEGRALSGAFS
Trigger: ACTAAAGGCGCCACTGAGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGTCTTCCCCACGTCCCAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS GCA 72 bp CAGGAACCAGAGCAGAGAGGCTGGGGACGGTATCTCTaGCCACAGAACCCATCTTGCTGCGTGGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: QEPEQRGWGRYL*PQNPSCCVAWR
Trigger: CCTCCAGGCCACGCAGCAAGATGGGTTCTGTGGGCAGAGATACCGTCCCCAGCCTCTCTGCTCTGGTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS CCA 72 bp AGGTTGGCCTGGTTCCTGACCCAGCGGTCCCAGAACTaGCTGGGCTCTGAGGCCCAGTATAAGCTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: RLAWFLTQRSQN*LGSEAQYKLSW
Trigger: CCAGGACAGCTTATACTGGGCCTCAGAGCCCAGCCAGTTCTGGGACCGCTGGGTCAGGAACCAGGCCAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS CAA 72 bp TGCAGCTGGCTGGGGGCCAGCACACCCAGCTTGTTCTaGGTCACCTGGGTCTTCAGCAACTCAGTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: CSWLGASTPSLF*VTWVFSNSVGP
Trigger: AGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGCCCCCAGCCAGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 72 bp GAAAGCTCTGGTTCCAGACAGGGCTACTGCTGTTCTTaGCCGTGCGTGTCTGGAGCCTGTGGCTGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: ESSGSRQGYCCS*PCVSGACGCRP
Trigger: CGGCCTGCAGCCACAGGCTCCAGACACGCACGGTCAAGAACAGCAGTAGCCCTGTCTGGAACCAGAGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS TCA 72 bp AGAGCACTGGCACACTCACCACCAGAACGCCATTGCTaGCGAGCCACTCGCCACGGTCAGCCAGACTCTGCA +
Preference number: 6 (lower is better)
Translates to: RALAHSPPERHC*RATRHGQPDSA
Trigger: TGCAGAGTCTGGCTGACCGTGGCGAGTGGCTCGTCAGCAATGGCGTTCTGGTGGTGAGTGTGCCAGTGCTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS TCA 72 bp CTGGAGGTTGGCTGCATACAGGTTGCTCCAGATACCTaGAAGAGCGGCCGTGAGGGAAGAGGGCCCCCGACT +
Preference number: 6 (lower is better)
Translates to: LEVGCIQVAPDT*KSGREGRGPPT
Trigger: AGTCGGGGGCCCTCTTCCCTCACGGCCGCTCTTTCAGGTATCTGGAGCAACCTGTATGCAGCCAACCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566076.1
CDS GCA 72 bp TGCCTCCCTGCGTTTTCCAGCCAAACATTTATCAAGTaGTCCCCGGGTGCCTGGCACTGGGCCGGTCACTCG +
Preference number: 6 (lower is better)
Translates to: CLPAFSSQTFIK*SPGAWHWAGHS
Trigger: CGAGTGACCGGCCCAGTGCCAGGCACCCGGGGAGCACTTGATAAATGTTTGGCTGGAAAACGCAGGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS CCA 72 bp CTCAGTGGGCCCTGCCAGGTCCTTCTGAGACCACTCTaGGTCCTCATAAAGGTTGGCCAAGGCCCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: LSGPCQVLLRPL*VLIKVGQGPGG
Trigger: TCCACCTGGGCCTTGGCCAACCTTTATGAGGACCCAGAGTGGTCTCAGAAGGACCTGGCAGGGCCCACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 72 bp GGGAAGACAAGAGCTGAGAGCCAGGGGCTGTCCCAGTaGGTTGGGGACTCACACTTCTGGTCTCCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: GKTRAESQGLSQ*VGDSHFWSPVS
Trigger: GGAGACAGGAGACCAGAAGTGTGAGTCCCCAACCCACTGGGACAGCCCCTGGCTCTCAGCTCTTGTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS CCA 72 bp CTTGCTTCCTTCCCTGGGAGGCCAGTACCTGGGACGTaGGGAAGACAAGCCTCACCACTTGACCAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LASFPGRPVPGT*GRQASPLDQRA
Trigger: TGCCCTCTGGTCAAGTGGTGAGGCTTGTCTTCCCCACGTCCCAGGTACTGGCCTCCCAGGGAAGGAAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS CAA 72 bp TACCGCTGCAGCTGGCTGGGGGCCAGCACACCCAGCTaGTTCTTGGTCACCTGGGTCTTCAGCAACTCAGTG +
Preference number: 6 (lower is better)
Translates to: YRCSWLGASTPS*FLVTWVFSNSV
Trigger: CACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGCTGGGTGTGCTGGCCCCCAGCCAGCTGCAGCGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 72 bp TGGCCTGGGCCAGTGGACGCCACGTCAGAAGATCGGTaGAAAACTCAGCTATCCTGCCGGCTGTTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: WPGPVDATSEDR*KTQLSCRLLRV
Trigger: CACCCTCAACAGCCGGCAGGATAGCTGAGTTTTTCACCGATCTTCTGACGTGGCGTCCACTGGCCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS TCA 72 bp CAACTGCTGGAAGGCTCCGTGGAGGTTGTAGTCCAATaGCAGGATGAGGTCCACGTCCCGAGTGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: QLLEGSVEVVVQ*QDEVHVPSGLQ
Trigger: CTGCAGCCCACTCGGGACGTGGACCTCATCCTGTCATTGGACTACAACCTCCACGGAGCCTTCCAGCAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 72 bp AGTACCTGGGACGTGGGGAAGACAAGCCTCACCACTTaGCCAGAGGGCAGGGCACTCAGTGGCGCCTTTAGT +
Preference number: 6 (lower is better)
Translates to: STWDVGKTSLTT*PEGRALSGAFS
Trigger: ACTAAAGGCGCCACTGAGTGCCCTGCCCTCTGGTCAAGTGGTGAGGCTTGTCTTCCCCACGTCCCAGGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483748.5
CDS CAA 72 bp TGGGGACTCACACTTCTGGTCTCCTGTCTCCTCCAGTaGAACGTGCAAGCAGGAGAGCTCCCGGGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: WGLTLLVSCLLQ*NVQAGELPGLS
Trigger: ACTCAGGCCCGGGAGCTCTCCTGCTTGCACGTTCAACTGGAGGAGACAGGAGACCAGAAGTGTGAGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS CAA 90 bp CCAGTGGGTTGGGGACTCACACTTCTGGTCTCCTGTCTCCTCCAGTaGAACGTGCAAGCAGGAGAGCTCCCGGGCCTGAGTCATGAAGAC +
Preference number: 6 (lower is better)
Translates to: PVGWGLTLLVSCLLQ*NVQAGELPGLSHED
Trigger: GTCTTCATGACTCAGGCCCGGGAGCTCTCCTGCTTGCACGTTCAACTGGAGGAGACAGGAGACCAGAAGTGTGAGTCCCCAACCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS GCA 72 bp CTTGGTCACCTGGGTCTTCAGCAACTCAGTGGGCCCTaGCAGGTCCTTCTGAGACCACTCTGGGTCCTCATA +
Preference number: 6 (lower is better)
Translates to: LGHLGLQQLSGP*QVLLRPLWVLI
Trigger: TATGAGGACCCAGAGTGGTCTCAGAAGGACCTGGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 72 bp GCTTGTTCTTGGTCACCTGGGTCTTCAGCAACTCAGTaGGCCCTGCCAGGTCCTTCTGAGACCACTCTGGGT +
Preference number: 6 (lower is better)
Translates to: ACSWSPGSSATQ*ALPGPSETTLG
Trigger: ACCCAGAGTGGTCTCAGAAGGACCTGGCAGGGCCCACTGAGTTGCTGAAGACCCAGGTGACCAAGAACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 72 bp AGGGTTCTGGCCATGACTCAGGGCCTCCCGTTGATCTaGGAGCTTGTGATCATGGGGCTCATCATGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RVLAMTQGLPLI*ELVIMGLIMQQ
Trigger: CTGCTGCATGATGAGCCCCATGATCACAAGCTCTCAGATCAACGGGAGGCCCTGAGTCATGGCCAGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS CCA 72 bp GAGGCCACGCAGGAAATTATGTGTGGCCTGGGCCAGTaGACGCCACGTCAGAAGATCGGTGAAAAACTCAGC +
Preference number: 6 (lower is better)
Translates to: EATQEIMCGLGQ*TPRQKIGEKLS
Trigger: GCTGAGTTTTTCACCGATCTTCTGACGTGGCGTCCACTGGCCCAGGCCACACATAATTTCCTGCGTGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS CCA 72 bp CTTTGTGGAAATGGAGGCCACGCAGGAAATTATGTGTaGCCTGGGCCAGTGGACGCCACGTCAGAAGATCGG +
Preference number: 6 (lower is better)
Translates to: LCGNGGHAGNYV*PGPVDATSEDR
Trigger: CCGATCTTCTGACGTGGCGTCCACTGGCCCAGGCCACACATAATTTCCTGCGTGGCCTCCATTTCCACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS TCA 72 bp AAGGACTGTCAGCTTTCTAACCCAGAGCCAGGGATGTaGTGTCCCAATTGGTCCCAAGTCCCTCCTACCCGC +
Preference number: 6 (lower is better)
Translates to: KDCQLSNPEPGM*CPNWSQVPPTR
Trigger: GCGGGTAGGAGGGACTTGGGACCAATTGGGACATCACATCCCTGGCTCTGGGTTAGAAAGCTGACAGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452633.5
CDS CCA 72 bp AACTGGCTGGGCTCTGAGGCCCAGTATAAGCTGTCCTaGAGGTTGGCTGCATACAGGTTGCTCCAGATACCT +
Preference number: 6 (lower is better)
Translates to: NWLGSEAQYKLS*RLAAYRLLQIP
Trigger: AGGTATCTGGAGCAACCTGTATGCAGCCAACCTCCAGGACAGCTTATACTGGGCCTCAGAGCCCAGCCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS CCA 72 bp TGGAAATGGAGGCCACGCAGGAAATTATGTGTGGCCTaGGCCAGTGGACGCCACGTCAGAAGATCGGTGAAA +
Preference number: 6 (lower is better)
Translates to: WKWRPRRKLCVA*ASGRHVRRSVK
Trigger: TTTCACCGATCTTCTGACGTGGCGTCCACTGGCCCAGGCCACACATAATTTCCTGCGTGGCCTCCATTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
ENST00000566076.1
CDS CAA 90 bp CCCTGGCTGCTGCTGGTCTGCACTTCATTACCTGGGCCCTTGAGATaGTATTCCCTTAACAAACTGAAATCCCAGGGTCCCCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: PWLLLVCTSLPGPLR*YSLNKLKSQGPQAE
Trigger: CTCAGCCTGGGGACCCTGGGATTTCAGTTTGTTAAGGGAATACAATCTCAAGGGCCCAGGTAATGAAGTGCAGACCAGCAGCAGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS CAA 90 bp GCAGCACCCTGGCTGCTGCTGGTCTGCACTTCATTACCTGGGCCCTaGAGATTGTATTCCCTTAACAAACTGAAATCCCAGGGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: AAPWLLLVCTSLPGP*RLYSLNKLKSQGPQ
Trigger: CTGGGGACCCTGGGATTTCAGTTTGTTAAGGGAATACAATCTCAAGGGCCCAGGTAATGAAGTGCAGACCAGCAGCAGCCAGGGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461382.5
CDS CAA 72 bp CAGTATAAGCTGTCCTGGAGGTTGGCTGCATACAGGTaGCTCCAGATACCTGAAAGAGCGGCCGTGAGGGAA +
Preference number: 6 (lower is better)
Translates to: QYKLSWRLAAYR*LQIPERAAVRE
Trigger: TTCCCTCACGGCCGCTCTTTCAGGTATCTGGAGCAACCTGTATGCAGCCAACCTCCAGGACAGCTTATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566076.1
CDS TCA 72 bp CAAATTCAAAAGTGGTCAGGCTCTGCCCTTTGGTGTTaGGGGCACAGTAGATGGGCAGAGGGTTCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: QIQKWSGSALWC*GHSRWAEGSGH
Trigger: ATGGCCAGAACCCTCTGCCCATCTACTGTGCCCTCAACACCAAAGGGCAGAGCCTGACCACTTTTGAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000483748.5
CDS TCA 72 bp TCCATGACATTCTTGAGCTGCCTGTGGATCCTGAAGTaGAAGCTCTGGTTCCAGACAGGGCTACTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: SMTFLSCLWILK*KLWFQTGLLLF
Trigger: GAACAGCAGTAGCCCTGTCTGGAACCAGAGCTTTCACTTCAGGATCCACAGGCAGCTCAAGAATGTCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS CCA 72 bp ACTGACAACACAGGGTCATCTCCGGTCACCAGGTCCTaGTCAAAGACTTTCAGTTCCATGACATTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: TDNTGSSPVTRS*SKTFSSMTFLS
Trigger: GCTCAAGAATGTCATGGAACTGAAAGTCTTTGACCAGGACCTGGTGACCGGAGATGACCCTGTGTTGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452633.5
ENST00000458483.4
ENST00000461382.5
CDS CAA 72 bp TGGCTGCTGCTGGTCTGCACTTCATTACCTGGGCCCTaGAGATTGTATTCCCTTAACAAACTGAAATCCCAG +
Preference number: 6 (lower is better)
Translates to: WLLLVCTSLPGP*RLYSLNKLKSQ
Trigger: CTGGGATTTCAGTTTGTTAAGGGAATACAATCTCAAGGGCCCAGGTAATGAAGTGCAGACCAGCAGCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461382.5