Pregenerated sensors for PLA2G2E (Homo sapiens)
Ensembl gene IDs: ENSG00000188784Ensembl transcript IDs: ENST00000375116.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTCAGAAGAGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCTaGGTGCTGAAGGGTCCATGGCTCCTGGGGCAGGGTTCTTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: IQKRELRSQKLVTVF*VLKGPWLLGQGSFY Trigger: GTAGAAAGAACCCTGCCCCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCTCTTCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTAGGGAGGGCCTTTGGTaGCAATGTTCCCCAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: AEIPEASDSLLGAEGSMAREGLW*QCSPGL Trigger: CAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCT...AGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCAAAGGGAGGGCCTTTaGTGCCAATGTTCCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: KRELRSQKLVTVFWVLKGQREGL*CQCSPG Trigger: GCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTG...ACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| 3UTR CAA 90 bp | GTGATGGTCCAGGACATATCTCTGAGCTCTCAAGGAGGGATGAGTTaGCAGGAAAGGAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: VMVQDISLSSQGGMS*QERNFPKGGPLVPM Trigger: CATTGGCACCAAAGGCCCTCCCTTTGGAAAATTCCTTTCCTGCAAACTCATCCCTCCTTGAGAGCTCAGAGATATGTCCTGGACCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| 3UTR-3UTR CCA 90 bp | TATTCACTTATTCAGAAGAGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCAGAGAAGGGGTAGCCTaGGAGGCTAGTGATGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: YSLIQKRELRSQKLVTVFREGVA*EASDGP Trigger: TGGACCATCACTAGCCTCCCAGGCTACCCCTTCTCT...GAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCTCTTCTGAATAAGTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCACCAAAGGGAGGGCCTTaGGTGCCAATGTTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RELRSQKLVTVFWVLKGPPKGGP*VPMFPR Trigger: CCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGG...TGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| 3UTR CCA 72 bp | AAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATaGCTCCTGGGGCAGGGTTCTTTCTACAGAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: KLVTVFWVLKGP*LLGQGSFYREG Trigger: CCCTTCTCTGTAGAAAGAACCCTGCCCCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | TCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTCCTGGGGTGGTCCACCGGCCAGTaGGAGCCACCGATGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: SQKLVTVFWVLKGPWLLGWSTGQ*EPPMPQ Trigger: CTGCGGCATCGGTGGCTCCCACTGGCCGGTGGACCA...CCCCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | ATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTCCTGGGCAGCACCAGTCAGTCTaGTCCACCGGCCAGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: IPEASDSLLGAEGSMAPGQHQSV*STGQWE Trigger: CTCCCACTGGCCGGTGGACCAGACTGACTGGTGCTG...CCCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | ATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTCCTGGGTCAGCCGCTGGCAGGTaGTCCTGCCGGCGCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: IPEASDSLLGAEGSMAPGSAAGR*SCRRRK Trigger: TTTTCTGCGCCGGCAGGACCACCTGCCAGCGGCTGA...CCCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR GCA 90 bp | GAGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCTGTAGGTGCCCAGGTTaGGGCGAAAGCAGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EGAEIPEASDSLLGAEGSCRCPG*GESRGQ Trigger: CTGCCCTCTGCTTTCGCCGCAACCTGGGCACCTACA...GGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | AGGAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTCAGCAGTCGTGGGCGTaGCAGCACCAGTCAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RNFPKGGPLVPMFPRPGTQQSWA*QHQSVW Trigger: CCAGACTGACTGGTGCTGCCACGCCCACGACTGCTG...AGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | GTGATGGTCCAGGACATATCTCTGAGCTCTCAAGGAGGGATGAGTTTGCAGGAATCGCAGGTCAGCCGCTaGCAGGTGGTCCTGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: VMVQDISLSSQGGMSLQESQVSR*QVVLPA Trigger: CGCCGGCAGGACCACCTGCCAGCGGCTGACCTGCGA...TTCCTGCAAACTCATCCCTCCTTGAGAGCTCAGAGATATGTCCTGGACCATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR TCA 90 bp | GAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTACCAGTCTTCTGGGTGCTaGAGGGTCCATGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EFSKGRAFGANVPQAWDYQSSGC*RVHGSW Trigger: CCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTG...GTAGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR GCA 90 bp | GAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTACGCGGGGTGGGCCCGGTaGACAGCTTGTTGGGATAAT | + |
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Preference number: 4 (lower is better) Translates to: EFSKGRAFGANVPQAWDYAGWAR*TACWDN Trigger: ATTATCCCAACAAGCTGTGCACCGGGCCCACCCCGC...GTAGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR GCA 90 bp | AGGAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTAGGGAGGGCCTTTGGTaGCAATGTTCCCCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RNFPKGGPLVPMFPRPGTREGLW*QCSPGL Trigger: CAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCT...AGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | ATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTACAGGTGCTGAAGGGTCCATaGCTCCTGGGGCAGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: IFQREGLWCQCSPGLGLQVLKGP*LLGQGS Trigger: AGAACCCTGCCCCAGGAGCCATGGACCCTTCAGCAC...CTGTAGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR TCA 90 bp | ATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTCCTGGGATCATCACCCCAAACTaGACCAGGTTCCCGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: IPEASDSLLGAEGSMAPGIITPN*TRFPVT Trigger: GGTCACCGGGAACCTGGTTCAGTTTGGGGTGATGAT...CCCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR GCA 90 bp | GAGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATTTGCGGTTGTAGGTaGCCAGGTTGCGGCGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: EGAEIPEASDSLLGAEGSICGCR*PGCGES Trigger: GCTTTCGCCGCAACCTGGGCACCTACAACCGCAAAT...GGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTACAGCGATTTCATCCCAGGTTaGGGGGAAGGGAGGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: FSKGRAFGANVPQAWDYSDFIPG*GEGRCT Trigger: TGTGCACCTCCCTTCCCCCCAACCTGGGATGAAATC...GCTGTAGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | AGGAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTCAAAGGGAGGGCCTTTaGTGCCAATGTTCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RNFPKGGPLVPMFPRPGTQREGL*CQCSPG Trigger: GCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTG...AGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | ATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTCCTGGGAGGGTCCATGGCTCCTaGGGCAGGGTTCTTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: IPEASDSLLGAEGSMAPGRVHGS*GRVLST Trigger: TGTAGAAAGAACCCTGCCCCAGGAGCCATGGACCCT...CCCAGGAGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR GCA 90 bp | GCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTAGTGGGAGCCACCGATaGCGCAGTAACAGCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: AEIPEASDSLLGAEGSMASGSHR*RSNSHS Trigger: ACTATGGCTGTTACTGCGGCATCGGTGGCTCCCACT...AGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | GCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCATGGCTAGAGAAGGGGTAGCCTaGGAGGCTAGTGATGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AEIPEASDSLLGAEGSMAREGVA*EASDGP Trigger: TGGACCATCACTAGCCTCCCAGGCTACCCCTTCTCT...AGCCATGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | AGGAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTCTAGTGACAGTCTTCTaGGTGCTGAAGGGTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: RNFPKGGPLVPMFPRPGTLVTVF*VLKGPW Trigger: CCATGGACCCTTCAGCACCCAGAAGACTGTCACTAG...AGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR TCA 90 bp | AGGAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTGCTCTCAAGGAGGGATaGGTTTGCAGGAAAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: RNFPKGGPLVPMFPRPGTALKEG*VCRKGI Trigger: AATTCCTTTCCTGCAAACTCATCCCTCCTTGAGAGC...AGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR GCA 90 bp | GAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTACGATAATGGGCATATTTaGGGTTGTAGGTGCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: EFSKGRAFGANVPQAWDYDNGHI*GCRCPG Trigger: ACCTGGGCACCTACAACCGCAAATATGCCCATTATC...GTAGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | AGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTCCACGGTGCACAGCTTGTTaGGATAATGGGCATATTTGC | + |
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Preference number: 4 (lower is better) Translates to: RELRSQKLVTVFWVLKGPRCTAC*DNGHIC Trigger: GCAAATATGCCCATTATCCCAACAAGCTGTGCACCG...TGGACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR TCA 90 bp | GCTGAAGGGTCCATGGCTCCTGGGGCAGGGTTCTTTCTACAGAGAAGGGGTAGCAAATGCCACGTTCGCTaGCAGAGAAAAGATACTTTT | + |
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Preference number: 4 (lower is better) Translates to: AEGSMAPGAGFFLQRRGSKCHVR*QRKDTF Trigger: AAAAGTATCTTTTCTCTGTCAGCGAACGTGGCATTT...GCTACCCCTTCTCTGTAGAAAGAACCCTGCCCCAGGAGCCATGGACCCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | GTGATGGTCCAGGACATATCTCTGAGCTCTCAAGGAGGGATGAGTTTGCAGGAAAGGAACACCAGCACGTaGGGAGATTTCATCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VMVQDISLSSQGGMSLQERNTST*GDFIPG Trigger: ACCTGGGATGAAATCTCCCCACGTGCTGGTGTTCCT...TTCCTGCAAACTCATCCCTCCTTGAGAGCTCAGAGATATGTCCTGGACCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CCA 90 bp | AAGAGGGAGCTGAGATCCCAGAAGCTAGTGACAGTCTTCTGGGTGCTGAAGGGTGATACTTTTCCAGTTTaGGCTCACAGCCCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KRELRSQKLVTVFWVLKGDTFPV*AHSPAS Trigger: AGAAGCTGGGCTGTGAGCCCAAACTGGAAAAGTATC...ACCCTTCAGCACCCAGAAGACTGTCACTAGCTTCTGGGATCTCAGCTCCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS GCA 90 bp | GGCAGCACCAGTCAGTCTGGTCCACCGGCCAGTGGGAGCCACCGATaGCGCAGTAACAGCCATAGTCGTTGTACTGCAGGGCGGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: GSTSQSGPPASGSHR*RSNSHSRCTAGRTC Trigger: GCAAGTCCGCCCTGCAGTACAACGACTATGGCTGTTACTGCGGCATCGGTGGCTCCCACTGGCCGGTGGACCAGACTGACTGGTGCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS GCA 90 bp | GCGGGGTGGGCCCGGTGCACAGCTTGTTGGGATAATGGGCATATTTaGGGTTGTAGGTGCCCAGGTTGCGGCGAAAGCAGAGGGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: AGWARCTACWDNGHI*GCRCPGCGESRGQP Trigger: GGGCTGCCCTCTGCTTTCGCCGCAACCTGGGCACCTACAACCGCAAATATGCCCATTATCCCAACAAGCTGTGCACCGGGCCCACCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CAA 90 bp | GCTGAAGGGTCCATGGCTCCTGGGGCAGGGTTCTTTCTACAGAGAAGGGGTAGCCAGAGGGCAGCCCTCTaGTCACACTCGCAGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: AEGSMAPGAGFFLQRRGSQRAAL*SHSQVS Trigger: GCTGACCTGCGAGTGTGACAAGAGGGCTGCCCTCTG...GCTACCCCTTCTCTGTAGAAAGAACCCTGCCCCAGGAGCCATGGACCCTTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS GCA 90 bp | CGGTGCACAGCTTGTTGGGATAATGGGCATATTTGCGGTTGTAGGTaGCCAGGTTGCGGCGAAAGCAGAGGGCAGCCCTCTTGTCACACT | + |
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Preference number: 5 (lower is better) Translates to: RCTACWDNGHICGCR*PGCGESRGQPSCHT Trigger: AGTGTGACAAGAGGGCTGCCCTCTGCTTTCGCCGCAACCTGGGCACCTACAACCGCAAATATGCCCATTATCCCAACAAGCTGTGCACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CAA 90 bp | GAATTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTACTACTGCAGGGCGGACTaGCCTGTCATCTTCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: EFSKGRAFGANVPQAWDYYCRAD*PVIFSI Trigger: GATCGAGAAGATGACAGGCAAGTCCGCCCTGCAGTA...GTAGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS-3UTR CAA 90 bp | TTTTCCAAAGGGAGGGCCTTTGGTGCCAATGTTCCCCAGGCCTGGGACTACAGCAGATACTTTTCCAGTTaGGGCTCACAGCCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FSKGRAFGANVPQAWDYSRYFSS*GSQPSF Trigger: GAAGCTGGGCTGTGAGCCCAAACTGGAAAAGTATCT...GCTGTAGTCCCAGGCCTGGGGAACATTGGCACCAAAGGCCCTCCCTTTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS CAA 72 bp | GTGCCCAGGTTGCGGCGAAAGCAGAGGGCAGCCCTCTaGTCACACTCGCAGGTCAGCCGCTGGCAGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VPRLRRKQRAAL*SHSQVSRWQVV Trigger: GACCACCTGCCAGCGGCTGACCTGCGAGTGTGACAAGAGGGCTGCCCTCTGCTTTCGCCGCAACCTGGGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS CCA 72 bp | AGGGCAGCCCTCTTGTCACACTCGCAGGTCAGCCGCTaGCAGGTGGTCCTGCCGGCGCAGAAAATGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: RAALLSHSQVSR*QVVLPAQKMPR Trigger: ACGTGGCATTTTCTGCGCCGGCAGGACCACCTGCCAGCGGCTGACCTGCGAGTGTGACAAGAGGGCTGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS GCA 72 bp | AGTCAGTCTGGTCCACCGGCCAGTGGGAGCCACCGATaGCGCAGTAACAGCCATAGTCGTTGTACTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SQSGPPASGSHR*RSNSHSRCTAG Trigger: CCCTGCAGTACAACGACTATGGCTGTTACTGCGGCATCGGTGGCTCCCACTGGCCGGTGGACCAGACTGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS TCA 72 bp | TCTCGATCATCACCCCAAACTGAACCAGGTTCCCGGTaGCCAGAGCCACCAGGAGGCAAAGGAACACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRSSPQTEPGSR*PEPPGGKGTPA Trigger: TGCTGGTGTTCCTTTGCCTCCTGGTGGCTCTGGTCACCGGGAACCTGGTTCAGTTTGGGGTGATGATCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS TCA 72 bp | GACTTGCCTGTCATCTTCTCGATCATCACCCCAAACTaGACCAGGTTCCCGGTGACCAGAGCCACCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: DLPVIFSIITPN*TRFPVTRATRR Trigger: CCTCCTGGTGGCTCTGGTCACCGGGAACCTGGTTCAGTTTGGGGTGATGATCGAGAAGATGACAGGCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS GCA 72 bp | GCTTGTTGGGATAATGGGCATATTTGCGGTTGTAGGTaGCCAGGTTGCGGCGAAAGCAGAGGGCAGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ACWDNGHICGCR*PGCGESRGQPS Trigger: AGAGGGCTGCCCTCTGCTTTCGCCGCAACCTGGGCACCTACAACCGCAAATATGCCCATTATCCCAACAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS GCA 72 bp | GCCCGGTGCACAGCTTGTTGGGATAATGGGCATATTTaGGGTTGTAGGTGCCCAGGTTGCGGCGAAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ARCTACWDNGHI*GCRCPGCGESR Trigger: TCTGCTTTCGCCGCAACCTGGGCACCTACAACCGCAAATATGCCCATTATCCCAACAAGCTGTGCACCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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| CDS GCA 72 bp | GATAATGGGCATATTTGCGGTTGTAGGTGCCCAGGTTaGGGCGAAAGCAGAGGGCAGCCCTCTTGTCACACT | + |
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Preference number: 6 (lower is better) Translates to: DNGHICGCRCPG*GESRGQPSCHT Trigger: AGTGTGACAAGAGGGCTGCCCTCTGCTTTCGCCGCAACCTGGGCACCTACAACCGCAAATATGCCCATTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375116.3 |
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