Pregenerated sensors for PLA2G10 (Homo sapiens)
Ensembl gene IDs: ENSG00000069764, ENSG00000276870Ensembl transcript IDs: ENST00000438167.8, ENST00000621727.2
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAAGCACACGTAATATCCTaGAGGCCTCGCCGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: FITERTLYFLVQKSISSQAHVIS*RPRRTR Trigger: CCGGGTCCGGCGAGGCCTCCAGGATATTACGTGTGC...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR CCA 90 bp | TTGTTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTGCACACGTAATATCCTaGAGGCCTCGCCGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: LFITERTLYFLVQKSISSAHVIS*RPRRTR Trigger: CCGGGTCCGGCGAGGCCTCCAGGATATTACGTGTGC...ACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621727.2 |
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| CDS-3UTR TCA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAAGTAGCAGGAGCAGCATaGTTGGCAGGCACACAGGTA | + |
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Preference number: 4 (lower is better) Translates to: FITERTLYFLVQKSISSQVAGAA*LAGTQV Trigger: TACCTGTGTGCCTGCCAATCATGCTGCTCCTGCTAC...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR GCA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAATTGGCATTTGTTCTCTaGCGGTCCGCACAGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: FITERTLYFLVQKSISSQLAFVL*RSAQDA Trigger: AGCGTCCTGTGCGGACCGGCAGAGAACAAATGCCAA...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR GCA 90 bp | TTGTTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTTTGGCATTTGTTCTCTaGCGGTCCGCACAGGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFITERTLYFLVQKSISSLAFVL*RSAQDA Trigger: AGCGTCCTGTGCGGACCGGCAGAGAACAAATGCCAA...ACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621727.2 |
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| CDS-3UTR CCA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAACAACAGTCGTGGCCATaGCAGCACCAGTCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FITERTLYFLVQKSISSQQQSWP*QHQSMA Trigger: TGCCATTGACTGGTGCTGCCATGGCCACGACTGTTG...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR CCA 90 bp | TTGTTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAACAGTCGTGGCCATaGCAGCACCAGTCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFITERTLYFLVQKSISSQQSWP*QHQSMA Trigger: TGCCATTGACTGGTGCTGCCATGGCCACGACTGTTG...ACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621727.2 |
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| CDS-3UTR CCA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAAGTAGTCAGTCACACTTaGGCGAGTCCGGCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: FITERTLYFLVQKSISSQVVSHT*ASPAHI Trigger: TATGTGAGCCGGACTCGCCCAAGTGTGACTGACTAC...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR GCA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAACGCTTTATTTCCTTGTaGAAAAGAGCATTTCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: FITERTLYFLVQKSISSQRFISL*KRAFQV Trigger: GACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCG...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR GCA 90 bp | TTGTTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCGCTTTATTTCCTTGTaGAAAAGAGCATTTCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LFITERTLYFLVQKSISSRFISL*KRAFQV Trigger: GACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCG...ACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000621727.2 |
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| CDS-3UTR CAA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAAGGTAGTCAGTCACACTaGGGCGAGTCCGGCTCACAT | + |
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Preference number: 5 (lower is better) Translates to: FITERTLYFLVQKSISSQGSQSH*GESGSH Trigger: ATGTGAGCCGGACTCGCCCAAGTGTGACTGACTACC...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTGGTAGTCAGTCACACTaGGGCGAGTCCGGCTCACAT | + |
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Preference number: 5 (lower is better) Translates to: LFITERTLYFLVQKSISSGSQSH*GESGSH Trigger: ATGTGAGCCGGACTCGCCCAAGTGTGACTGACTACC...ACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621727.2 |
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| CDS-3UTR CAA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAAAACAGTTCTTGGCATTaGTTCTCTGCCGGTCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: FITERTLYFLVQKSISSQNSSWH*FSAGPH Trigger: GTGCGGACCGGCAGAGAACAAATGCCAAGAACTGTT...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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| CDS-3UTR CAA 90 bp | TTGTTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTAACAGTTCTTGGCATTaGTTCTCTGCCGGTCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: LFITERTLYFLVQKSISSNSSWH*FSAGPH Trigger: GTGCGGACCGGCAGAGAACAAATGCCAAGAACTGTT...ACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621727.2 |
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| CDS-3UTR CAA 90 bp | TGTTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAACATTTTATTTTATTaGGCCGGGCGCGGTGACTCA | + |
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Preference number: 5 (lower is better) Translates to: CSLLRGRFISLCKRAFQVNILFY*AGRGDS Trigger: TGAGTCACCGCGCCCGGCCAAATAAAATAAAATGTT...GACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000621727.2 |
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| CDS-3UTR CAA 90 bp | TTCATTACTGAGAGGACGCTTTATTTCCTTGTGCAAAAGAGCATTTCAAGTCAAGGACGCTTTATTTCCTaGTGCAAAAGAGCATTTCAA | + |
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Preference number: 5 (lower is better) Translates to: FITERTLYFLVQKSISSQGRFIS*CKRAFQ Trigger: TTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCC...TTGACTTGAAATGCTCTTTTGCACAAGGAAATAAAGCGTCCTCTCAGTAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000438167.8 ENST00000621727.2 |
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