RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLA1A (Homo sapiens)

Ensembl gene IDs: ENSG00000144837

Ensembl transcript IDs: ENST00000273371.9, ENST00000472126.1, ENST00000475963.1, ENST00000488919.5, ENST00000494440.5, ENST00000495992.5

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGCCAAGTTCTGTAAAATaGGTTCTCCCTCCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMPSSVK*VLPPLQ
Trigger: CTGGAGGGGAGGGAGAACTCATTTTACAGAACTTGG...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
3UTR-3UTR GCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGTGGTCTACAATAAGCTaGACACACACATCCCTCATC +
Preference number: 2 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMWSTIS*THTSLI
Trigger: GATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCA...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
3UTR-3UTR GCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAATGGTCTACAATAAGCTaGACACACACATCCCTCATC +
Preference number: 2 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEWSTIS*THTSLI
Trigger: GATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCA...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGCGGGGTCCAGGCCTGTaGTCTGTCCCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMRGPGL*SVPAGL
Trigger: GAGGCCAGCTGGGACAGATCACAGGCCTGGACCCCG...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCGGGGTCCAGGCCTGTaGTCTGTCCCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPRGPGL*SVPAGL
Trigger: GAGGCCAGCTGGGACAGATCACAGGCCTGGACCCCG...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAAGAGCTGTCCCACCATaGCCCCAACGTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKRAVPP*PQRGPP
Trigger: TGGGGGCCCACGTTGGGGGCATGGTGGGACAGCTCT...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACAGAGCTGTCCCACCATaGCCCCAACGTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHRAVPP*PQRGPP
Trigger: TGGGGGCCCACGTTGGGGGCATGGTGGGACAGCTCT...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCAGCGCACTTTGGCTGTaGGGTAGGAGGTGCATCCCC +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLSALWL*GRRCIP
Trigger: GGGGATGCACCTCCTACCCCACAGCCAAAGTGCGCT...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAACCATGCCCCCAACGTaGGCCCCCAGGCTAACACCA +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPTMPPT*APRLTP
Trigger: TGGTGTTAGCCTGGGGGCCCACGTTGGGGGCATGGT...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAAGCGCACTTTGGCTGTaGGGTAGGAGGTGCATCCCC +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPSALWL*GRRCIP
Trigger: GGGGATGCACCTCCTACCCCACAGCCAAAGTGCGCT...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCGAAGTCAGCGCACTTTaGCTGTGGGGTAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLEVSAL*LWGRRC
Trigger: GCACCTCCTACCCCACAGCCAAAGTGCGCTGACTTC...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAGTGATCTGTCCCAGCTaGCCTCCGAAGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPVICPS*PPKSCP
Trigger: GGGACAGCTCTTCGGAGGCCAGCTGGGACAGATCAC...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCACTTCCACACTGGCCCTaGTGTACTCAGGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPLPHWP*CTQVQR
Trigger: CCGCTGGACCTGAGTACACCAGGGCCAGTGTGGAAG...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAACGGGGTCCAGGCCTGTaGTCTGTCCCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKERGPGL*SVPAGL
Trigger: GAGGCCAGCTGGGACAGATCACAGGCCTGGACCCCG...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGGGAGGAGAGGACGCCTaGGCCAGCCTGGAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMGGEDA*ASLEAQ
Trigger: TTGAGCTTCCAGGCTGGCTCAGGCGTCCTCTCCTCC...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494440.5
CDS-3UTR GCA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACAAGAGCTGTCCCACCATaGCCCCAACGTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTRAVPP*PQRGPP
Trigger: TGGGGGCCCACGTTGGGGGCATGGTGGGACAGCTCT...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAGAAGTCAGCGCACTTTaGCTGTGGGGTAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPEVSAL*LWGRRC
Trigger: GCACCTCCTACCCCACAGCCAAAGTGCGCTGACTTC...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCACCATGCCCCCAACGTaGGCCCCCAGGCTAACACCA +
Preference number: 4 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSTMPPT*APRLTP
Trigger: TGGTGTTAGCCTGGGGGCCCACGTTGGGGGCATGGT...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCCGGTGTCTGTGTGGATaGCTTCCACGAAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLRCLCG*LPRRGH
Trigger: ATGCCCTCTTCGTGGAAGCCATCCACACAGACACCG...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCGGAAGGCCTTGTAGCTaGCACAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLGRPCS*HRERPS
Trigger: TGATGGCCTTTCCCTGTGCCAGCTACAAGGCCTTCC...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTCGGGGTCCAGGCCTGTaGTCTGTCCCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSRGPGL*SVPAGL
Trigger: GAGGCCAGCTGGGACAGATCACAGGCCTGGACCCCG...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAGGTCTTGGCCTCCGTTaGCGAAGTAGTCCACATGTC +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPGLGLR*RSSPHV
Trigger: GACATGTGGACTACTTCGTCAACGGAGGCCAAGACC...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCACGAGGCTGTGATGCATaGAGTACGGAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPRGCDA*STEHWK
Trigger: CTTCCAGTGCTCCGTACTGCATGCATCACAGCCTCG...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCCGAGGCTGTGATGCATaGAGTACGGAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTRGCDA*STEHWK
Trigger: CTTCCAGTGCTCCGTACTGCATGCATCACAGCCTCG...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCTGCCTTCAAAAAGGTTaGCGCTCTGGAAGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLCLQKG*RSGSQR
Trigger: GCGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCA...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGCTTCCACACTGGCCCTaGTGTACTCAGGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMLPHWP*CTQVQR
Trigger: CCGCTGGACCTGAGTACACCAGGGCCAGTGTGGAAG...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCTTCCACACTGGCCCTaGTGTACTCAGGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPLPHWP*CTQVQR
Trigger: CCGCTGGACCTGAGTACACCAGGGCCAGTGTGGAAG...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCCGGTGTCTGTGTGGATaGCTTCCACGAAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTRCLCG*LPRRGH
Trigger: ATGCCCTCTTCGTGGAAGCCATCCACACAGACACCG...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCAATTCTCCAGGGCGCTaGTGTAGAGGTGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPNSPGR*CRGAQP
Trigger: GGGCTGTGCACCTCTACATCAGCGCCCTGGAGAATT...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAACGAGGCTGTGATGCATaGAGTACGGAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKRGCDA*STEHWK
Trigger: CTTCCAGTGCTCCGTACTGCATGCATCACAGCCTCG...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTGCCTTCAAAAAGGTTaGCGCTCTGGAAGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTCLQKG*RSGSQR
Trigger: GCGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCA...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTACCATGCCCCCAACGTaGGCCCCCAGGCTAACACCA +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSTMPPT*APRLTP
Trigger: TGGTGTTAGCCTGGGGGCCCACGTTGGGGGCATGGT...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACGGGAAAGGCCATCAGTaGACAGGAATTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHGKGHQ*TGILQG
Trigger: GCCCTGGAGAATTCCTGTCCACTGATGGCCTTTCCC...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACGGAAGGCCTTGTAGCTaGCACAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHGRPCS*HRERPS
Trigger: TGATGGCCTTTCCCTGTGCCAGCTACAAGGCCTTCC...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCCATTGTGGGGTGGCATaGGCTATGATTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLHCGVA*AMIPFP
Trigger: TGGGAAAGGAATCATAGCCCATGCCACCCCACAATG...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACAACGCCTGAGCCAGCCTaGAAGCTCAAGGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTTPEPA*KLKGQV
Trigger: AACCTGGCCCTTGAGCTTCCAGGCTGGCTCAGGCGT...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494440.5
CDS-3UTR TCA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACAACCTGGGGGCATCGCTaGGCTGGAAATCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTTWGHR*AGNLRA
Trigger: AGCTCTGAGATTTCCAGCTCAGCGATGCCCCCAGGT...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCGCACCAGGAGTTTATTaGGGAAAAGGGAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLAPGVY*GKGRSR
Trigger: TCGAGATCTCCCTTTTCCTCAATAAACTCCTGGTGC...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
CDS-3UTR TCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCACCAATGATGTGGATTaGGGATTCCGACACACCCAG +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTTNDVD*GFRHTQ
Trigger: CTGGGTGTGTCGGAATCCTCAATCCACATCATTGGT...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCGGTCTTGGCCTCCGTTaGCGAAGTAGTCCACATGTC +
Preference number: 4 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSGLGLR*RSSPHV
Trigger: GACATGTGGACTACTTCGTCAACGGAGGCCAAGACC...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGGGAGCGGCTCTATCTTaGCACCACCTTGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMGAALS*HHLVPP
Trigger: TGGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCC...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCGGAGCGGCTCTATCTTaGCACCACCTTGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPGAALS*HHLVPP
Trigger: TGGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCC...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTGGAGCGGCTCTATCTTaGCACCACCTTGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPGAALS*HHLVPP
Trigger: TGGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCC...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACGGGTGGCATGGGCTATaGTTCCTTTCCCATAGCGTT +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHGWHGL*FLSHSV
Trigger: AACGCTATGGGAAAGGAATCATAGCCCATGCCACCC...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCAGTTTTGGAGGTCACTaGTTCCTTCTACTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLSFGGH*FLLLAA
Trigger: GGCAGCTAGTAGAAGGAAGCAGTGACCTCCAAAACT...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACGGGGCATCGCTGAGCTaGAAATCTCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHGASLS*KSQSWY
Trigger: ATACCAGCTCTGAGATTTCCAGCTCAGCGATGCCCC...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000495992.5
CDS-3UTR CCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAATGCCTTCAAAAAGGTTaGCGCTCTGGAAGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKCLQKG*RSGSQR
Trigger: GCGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCA...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTACCATGCCCCCAACGTaGGCCCCCAGGCTAACACCA +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSTMPPT*APRLTP
Trigger: TGGTGTTAGCCTGGGGGCCCACGTTGGGGGCATGGT...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTGTGATCTGTCCCAGCTaGCCTCCGAAGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSVICPS*PPKSCP
Trigger: GGGACAGCTCTTCGGAGGCCAGCTGGGACAGATCAC...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGGTGATCTGTCCCAGCTaGCCTCCGAAGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMVICPS*PPKSCP
Trigger: GGGACAGCTCTTCGGAGGCCAGCTGGGACAGATCAC...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACTTGTCGGTGTCTGTGTaGATGGCTTCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHLSVSV*MASTKR
Trigger: CCTCTTCGTGGAAGCCATCCACACAGACACCGACAA...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAACTGCGTAAAAGAAGGTaGGGCAGCCAGGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKLRKRR*GSQVGL
Trigger: AAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAG...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCCATTGTGGGGTGGCATaGGCTATGATTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTHCGVA*AMIPFP
Trigger: TGGGAAAGGAATCATAGCCCATGCCACCCCACAATG...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCGTTTATCTGGCATTGTaGGGTGGCATGGGCTATGAT +
Preference number: 4 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLVYLAL*GGMGYD
Trigger: ATCATAGCCCATGCCACCCCACAATGCCAGATAAAC...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGACCTGGGGGCATCGCTaGGCTGGAAATCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMTWGHR*AGNLRA
Trigger: AGCTCTGAGATTTCCAGCTCAGCGATGCCCCCAGGT...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCAATGATGTGGATTaGGGATTCCGACACACCCAG +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHTNDVD*GFRHTQ
Trigger: CTGGGTGTGTCGGAATCCTCAATCCACATCATTGGT...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAACCAATGATGTGGATTaGGGATTCCGACACACCCAG +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKTNDVD*GFRHTQ
Trigger: CTGGGTGTGTCGGAATCCTCAATCCACATCATTGGT...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTAATTCTCCAGGGCGCTaGTGTAGAGGTGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSNSPGR*CRGAQP
Trigger: GGGCTGTGCACCTCTACATCAGCGCCCTGGAGAATT...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAAATTCTCCAGGGCGCTaGTGTAGAGGTGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKENSPGR*CRGAQP
Trigger: GGGCTGTGCACCTCTACATCAGCGCCCTGGAGAATT...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCGGGTGGCATGGGCTATaGTTCCTTTCCCATAGCGTT +
Preference number: 4 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSGWHGL*FLSHSV
Trigger: AACGCTATGGGAAAGGAATCATAGCCCATGCCACCC...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCATCTTTTCTCTGTCATTaGCAGGCAAAAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPSFLCH*QAKGQC
Trigger: GCACTGCCCTTTTGCCTGTCAATGACAGAGAAAAGA...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACCCAAGTTCTGTAAAATaGGTTCTCCCTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHPSSVK*VLPPLQ
Trigger: CTGGAGGGGAGGGAGAACTCATTTTACAGAACTTGG...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAACCAAGTTCTGTAAAATaGGTTCTCCCTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKPSSVK*VLPPLQ
Trigger: CTGGAGGGGAGGGAGAACTCATTTTACAGAACTTGG...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTGCTCAAGGGCCAGGTTaGTCAAGGAGCTCAACAATC +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPAQGPG*SRSSTI
Trigger: GATTGTTGAGCTCCTTGATCAACCTGGCCCTTGAGC...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494440.5
CDS-3UTR CCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTGGGGCATCGCTGAGCTaGAAATCTCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPGASLS*KSQSWY
Trigger: ATACCAGCTCTGAGATTTCCAGCTCAGCGATGCCCC...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGGAAGTCAGCGCACTTTaGCTGTGGGGTAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMEVSAL*LWGRRC
Trigger: GCACCTCCTACCCCACAGCCAAAGTGCGCTGACTTC...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCAAAAGGTTGGCGCTCTaGAAGTCAGCGCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPKRLAL*KSAHFG
Trigger: GCCAAAGTGCGCTGACTTCCAGAGCGCCAACCTTTT...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCTGCGTAAAAGAAGGTaGGGCAGCCAGGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPLRKRR*GSQVGL
Trigger: AAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAG...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACCATTGTGGGGTGGCATaGGCTATGATTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHHCGVA*AMIPFP
Trigger: TGGGAAAGGAATCATAGCCCATGCCACCCCACAATG...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAACATTGTGGGGTGGCATaGGCTATGATTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKHCGVA*AMIPFP
Trigger: TGGGAAAGGAATCATAGCCCATGCCACCCCACAATG...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTACCTGGGGGCATCGCTaGGCTGGAAATCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSTWGHR*AGNLRA
Trigger: AGCTCTGAGATTTCCAGCTCAGCGATGCCCCCAGGT...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000495992.5
CDS-3UTR TCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTAGGAGGTGCATCCCCTaGACTTCCAACGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSRRCIP*TSNAEP
Trigger: TGGCTCAGCGTTGGAAGTTCAGGGGATGCACCTCCT...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273371.9
ENST00000495992.5
CDS-3UTR TCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTTTCCCAGAGTGGCATTaGACCCAGAGTTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPFPEWH*TQSFGG
Trigger: ACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAA...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGTTCCCAGAGTGGCATTaGACCCAGAGTTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMFPEWH*TQSFGG
Trigger: ACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAA...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAGCACCAGGAGTTTATTaGGGAAAAGGGAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKAPGVY*GKGRSR
Trigger: TCGAGATCTCCCTTTTCCTCAATAAACTCCTGGTGC...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273371.9
ENST00000494440.5
CDS-3UTR TCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGACCAATGATGTGGATTaGGGATTCCGACACACCCAG +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMTNDVD*GFRHTQ
Trigger: CTGGGTGTGTCGGAATCCTCAATCCACATCATTGGT...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTGGTCTTGGCCTCCGTTaGCGAAGTAGTCCACATGTC +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSGLGLR*RSSPHV
Trigger: GACATGTGGACTACTTCGTCAACGGAGGCCAAGACC...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTAATTCTCCAGGGCGCTaGTGTAGAGGTGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSNSPGR*CRGAQP
Trigger: GGGCTGTGCACCTCTACATCAGCGCCCTGGAGAATT...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAGGAGCGGCTCTATCTTaGCACCACCTTGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEGAALS*HHLVPP
Trigger: TGGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCC...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCCCAAGTTCTGTAAAATaGGTTCTCCCTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPPSSVK*VLPPLQ
Trigger: CTGGAGGGGAGGGAGAACTCATTTTACAGAACTTGG...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAACTTCCTTCTACTAGCTaGCCACAGCTAGGATTCGAA +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKLPSTS*PQLGFE
Trigger: TTCGAATCCTAGCTGTGGGCAGCTAGTAGAAGGAAG...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAACGAGGCTGTGATGCATaGAGTACGGAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKERGCDA*STEHWK
Trigger: CTTCCAGTGCTCCGTACTGCATGCATCACAGCCTCG...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCATGGTCTACAATAAGCTaGACACACACATCCCTCATC +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPWSTIS*THTSLI
Trigger: GATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCA...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTGGTCTACAATAAGCTaGACACACACATCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTWSTIS*THTSLI
Trigger: GATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCA...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAACAAAGAGGAGAAACTaGACTTTGAGATCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPTKRRN*TLRSVP
Trigger: AGGCACCGATCTCAAAGTCCAGTTTCTCCTCTTTGT...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCATTGAACCCAGAGTTTTaGAGGTCACTGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPLNPEF*RSLLPS
Trigger: AGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAA...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGCGGTGTCTGTGTGGATaGCTTCCACGAAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMRCLCG*LPRRGH
Trigger: ATGCCCTCTTCGTGGAAGCCATCCACACAGACACCG...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAGGGAAAGGCCATCAGTaGACAGGAATTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEGKGHQ*TGILQG
Trigger: GCCCTGGAGAATTCCTGTCCACTGATGGCCTTTCCC...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTGGGAAAGGCCATCAGTaGACAGGAATTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSGKGHQ*TGILQG
Trigger: GCCCTGGAGAATTCCTGTCCACTGATGGCCTTTCCC...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGGGAAGGCCTTGTAGCTaGCACAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMGRPCS*HRERPS
Trigger: TGATGGCCTTTCCCTGTGCCAGCTACAAGGCCTTCC...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACGTTTATCTGGCATTGTaGGGTGGCATGGGCTATGAT +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHVYLAL*GGMGYD
Trigger: ATCATAGCCCATGCCACCCCACAATGCCAGATAAAC...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCCACATTTTTCACAGCTaGGAAGTAGACTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTHIFHS*EVDSCR
Trigger: TCTACAGGAGTCTACTTCTCAGCTGTGAAAAATGTG...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCGCACCAGGAGTTTATTaGGGAAAAGGGAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSAPGVY*GKGRSR
Trigger: TCGAGATCTCCCTTTTCCTCAATAAACTCCTGGTGC...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
CDS-3UTR TCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTGGTCTTGGCCTCCGTTaGCGAAGTAGTCCACATGTC +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSGLGLR*RSSPHV
Trigger: GACATGTGGACTACTTCGTCAACGGAGGCCAAGACC...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAGGGTGGCATGGGCTATaGTTCCTTTCCCATAGCGTT +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEGWHGL*FLSHSV
Trigger: AACGCTATGGGAAAGGAATCATAGCCCATGCCACCC...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGTCTTTTCTCTGTCATTaGCAGGCAAAAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMSFLCH*QAKGQC
Trigger: GCACTGCCCTTTTGCCTGTCAATGACAGAGAAAAGA...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTTCTTTTCTCTGTCATTaGCAGGCAAAAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPSFLCH*QAKGQC
Trigger: GCACTGCCCTTTTGCCTGTCAATGACAGAGAAAAGA...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACCAAGTTCTGTAAAATaGGTTCTCCCTCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTPSSVK*VLPPLQ
Trigger: CTGGAGGGGAGGGAGAACTCATTTTACAGAACTTGG...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCAGTTTTGGAGGTCACTaGTTCCTTCTACTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPSFGGH*FLLLAA
Trigger: GGCAGCTAGTAGAAGGAAGCAGTGACCTCCAAAACT...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCACAGATAACTATAACCTaGGTAAAAGAAGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPQITIT*VKEGGA
Trigger: TGCCCCACCTTCTTTTACGCAGGTTATAGTTATCTG...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAATGGTCTACAATAAGCTaGACACACACATCCCTCATC +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKWSTIS*THTSLI
Trigger: GATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCA...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTGGGGCATCGCTGAGCTaGAAATCTCAGAGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSGASLS*KSQSWY
Trigger: ATACCAGCTCTGAGATTTCCAGCTCAGCGATGCCCC...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTAAAAGGTTGGCGCTCTaGAAGTCAGCGCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSKRLAL*KSAHFG
Trigger: GCCAAAGTGCGCTGACTTCCAGAGCGCCAACCTTTT...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAAAAAGGTTGGCGCTCTaGAAGTCAGCGCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEKRLAL*KSAHFG
Trigger: GCCAAAGTGCGCTGACTTCCAGAGCGCCAACCTTTT...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAACAAAGAGGAGAAACTaGACTTTGAGATCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKTKRRN*TLRSVP
Trigger: AGGCACCGATCTCAAAGTCCAGTTTCTCCTCTTTGT...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTTTGTCGGTGTCTGTGTaGATGGCTTCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSLSVSV*MASTKR
Trigger: CCTCTTCGTGGAAGCCATCCACACAGACACCGACAA...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGTTGTCGGTGTCTGTGTaGATGGCTTCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMLSVSV*MASTKR
Trigger: CCTCTTCGTGGAAGCCATCCACACAGACACCGACAA...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCTGCGTAAAAGAAGGTaGGGCAGCCAGGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSLRKRR*GSQVGL
Trigger: AAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAG...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGCTGCGTAAAAGAAGGTaGGGCAGCCAGGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMLRKRR*GSQVGL
Trigger: AAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAG...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTGGGAAAGGCCATCAGTaGACAGGAATTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSGKGHQ*TGILQG
Trigger: GCCCTGGAGAATTCCTGTCCACTGATGGCCTTTCCC...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTGGAAGGCCTTGTAGCTaGCACAGGGAAAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSGRPCS*HRERPS
Trigger: TGATGGCCTTTCCCTGTGCCAGCTACAAGGCCTTCC...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCGTTTATCTGGCATTGTaGGGTGGCATGGGCTATGAT +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPVYLAL*GGMGYD
Trigger: ATCATAGCCCATGCCACCCCACAATGCCAGATAAAC...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCGGAGAAACTGGACTTTaGGATCGGTGCCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPGETGL*DRCLQK
Trigger: TTTTTGAAGGCACCGATCTCAAAGTCCAGTTTCTCC...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGTTCCCAGAGTGGCATTaGACCCAGAGTTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMFPEWH*TQSFGG
Trigger: ACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAA...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACCACATTTTTCACAGCTaGGAAGTAGACTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHHIFHS*EVDSCR
Trigger: TCTACAGGAGTCTACTTCTCAGCTGTGAAAAATGTG...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCATATGGTGATCTTAGATaGAGAGGTGATGTTACTGCT +
Preference number: 4 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPYGDLR*RGDVTA
Trigger: AGCAGTAACATCACCTCTTCATCTAAGATCACCATA...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTATGGTGATCTTAGATaGAGAGGTGATGTTACTGCT +
Preference number: 4 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTYGDLR*RGDVTA
Trigger: AGCAGTAACATCACCTCTTCATCTAAGATCACCATA...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACATTGTTCCTAAAACCCTaGACTTCCAACGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTLFLKP*TSNAEP
Trigger: TGGCTCAGCGTTGGAAGTTCAGGGTTTTAGGAACAA...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488919.5
CDS-3UTR GCA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACTTCCTTCTACTAGCTaGCCACAGCTAGGATTCGAA +
Preference number: 4 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTLPSTS*PQLGFE
Trigger: TTCGAATCCTAGCTGTGGGCAGCTAGTAGAAGGAAG...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACCAGATAACTATAACCTaGGTAAAAGAAGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHQITIT*VKEGGA
Trigger: TGCCCCACCTTCTTTTACGCAGGTTATAGTTATCTG...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTTGGTCTACAATAAGCTaGACACACACATCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPWSTIS*THTSLI
Trigger: GATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCA...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGACAAAGAGGAGAAACTaGACTTTGAGATCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMTKRRN*TLRSVP
Trigger: AGGCACCGATCTCAAAGTCCAGTTTCTCCTCTTTGT...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCTTGAACCCAGAGTTTTaGAGGTCACTGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSLNPEF*RSLLPS
Trigger: AGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAA...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTTGTCGGTGTCTGTGTaGATGGCTTCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSLSVSV*MASTKR
Trigger: CCTCTTCGTGGAAGCCATCCACACAGACACCGACAA...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCACATTTTTCACAGCTaGGAAGTAGACTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPHIFHS*EVDSCR
Trigger: TCTACAGGAGTCTACTTCTCAGCTGTGAAAAATGTG...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTTCTTTTCTCTGTCATTaGCAGGCAAAAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSSFLCH*QAKGQC
Trigger: GCACTGCCCTTTTGCCTGTCAATGACAGAGAAAAGA...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCCTAACACCAATGATGTaGATTGAGGATTCCGACACA +
Preference number: 4 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPLTPMM*IEDSDT
Trigger: TGTGTCGGAATCCTCAATCCACATCATTGGTGTTAG...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGGTTTATCTGGCATTGTaGGGTGGCATGGGCTATGAT +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMVYLAL*GGMGYD
Trigger: ATCATAGCCCATGCCACCCCACAATGCCAGATAAAC...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGTTGAACCCAGAGTTTTaGAGGTCACTGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMLNPEF*RSLLPS
Trigger: AGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAA...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCTGTACATGTTTCTATTaGATCCTAAGTACGAATGCC +
Preference number: 4 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSCTCFY*ILSTNA
Trigger: GGCATTCGTACTTAGGATTCAATAGAAACATGTACA...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAACAGATAACTATAACCTaGGTAAAAGAAGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEQITIT*VKEGGA
Trigger: TGCCCCACCTTCTTTTACGCAGGTTATAGTTATCTG...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGCTAACACCAATGATGTaGATTGAGGATTCCGACACA +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMLTPMM*IEDSDT
Trigger: TGTGTCGGAATCCTCAATCCACATCATTGGTGTTAG...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CCA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCTAACACCAATGATGTaGATTGAGGATTCCGACACA +
Preference number: 4 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSLTPMM*IEDSDT
Trigger: TGTGTCGGAATCCTCAATCCACATCATTGGTGTTAG...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAATATGGTGATCTTAGATaGAGAGGTGATGTTACTGCT +
Preference number: 4 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEYGDLR*RGDVTA
Trigger: AGCAGTAACATCACCTCTTCATCTAAGATCACCATA...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACATGTACATGTTTCTATTaGATCCTAAGTACGAATGCC +
Preference number: 4 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTCTCFY*ILSTNA
Trigger: GGCATTCGTACTTAGGATTCAATAGAAACATGTACA...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTCACATTAGCATTCGTTaGACGCAGAAGGGTTCTAAT +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSHISIR*TQKGSN
Trigger: ATTAGAACCCTTCTGCGTGCAACGAATGCTAATGTG...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR GCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTCAGATAACTATAACCTaGGTAAAAGAAGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSQITIT*VKEGGA
Trigger: TGCCCCACCTTCTTTTACGCAGGTTATAGTTATCTG...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTATGGTGATCTTAGATaGAGAGGTGATGTTACTGCT +
Preference number: 4 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSYGDLR*RGDVTA
Trigger: AGCAGTAACATCACCTCTTCATCTAAGATCACCATA...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR TCA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGTGTACATGTTTCTATTaGATCCTAAGTACGAATGCC +
Preference number: 4 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMCTCFY*ILSTNA
Trigger: GGCATTCGTACTTAGGATTCAATAGAAACATGTACA...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS CCA 90 bp TGTCCCAGCTGGCCTCCGAAGAGCTGTCCCACCATGCCCCCAACGTaGGCCCCCAGGCTAACACCAATGATGTGGATTGAGGATTCCGAC +
Preference number: 5 (lower is better)
Translates to: CPSWPPKSCPTMPPT*APRLTPMMWIEDSD
Trigger: GTCGGAATCCTCAATCCACATCATTGGTGTTAGCCTGGGGGCCCACGTTGGGGGCATGGTGGGACAGCTCTTCGGAGGCCAGCTGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 90 bp CCCACCATGCCCCCAACGTGGGCCCCCAGGCTAACACCAATGATGTaGATTGAGGATTCCGACACACCCAGCACCAGGAGTTTATTGAGG +
Preference number: 5 (lower is better)
Translates to: PTMPPTWAPRLTPMM*IEDSDTPSTRSLLR
Trigger: CCTCAATAAACTCCTGGTGCTGGGTGTGTCGGAATCCTCAATCCACATCATTGGTGTTAGCCTGGGGGCCCACGTTGGGGGCATGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
CDS CCA 90 bp TCCAGCAAGGAAGGCCTTGTAGCTGGCACAGGGAAAGGCCATCAGTaGACAGGAATTCTCCAGGGCGCTGATGTAGAGGTGCACAGCCCT +
Preference number: 5 (lower is better)
Translates to: SSKEGLVAGTGKGHQ*TGILQGADVEVHSP
Trigger: AGGGCTGTGCACCTCTACATCAGCGCCCTGGAGAATTCCTGTCCACTGATGGCCTTTCCCTGTGCCAGCTACAAGGCCTTCCTTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 90 bp AGAAACTGGACTTTGAGATCGGTGCCTTCAAAAAGGTTGGCGCTCTaGAAGTCAGCGCACTTTGGCTGTGGGGTAGGAGGTGCATCCCCC +
Preference number: 5 (lower is better)
Translates to: RNWTLRSVPSKRLAL*KSAHFGCGVGGASP
Trigger: GGGGGATGCACCTCCTACCCCACAGCCAAAGTGCGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCACCGATCTCAAAGTCCAGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494440.5
CDS TCA 90 bp CTGCGTAAAAGAAGGTGGGGCAGCCAGGTTGGTCTTGGCCTCCGTTaGCGAAGTAGTCCACATGTCCAACGGGAATCCGAATACCCAAAT +
Preference number: 5 (lower is better)
Translates to: LRKRRWGSQVGLGLR*RSSPHVQRESEYPN
Trigger: ATTTGGGTATTCGGATTCCCGTTGGACATGTGGACTACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS TCA 90 bp TGGCACAGGGAAAGGCCATCAGTGGACAGGAATTCTCCAGGGCGCTaGTGTAGAGGTGCACAGCCCTCATGTGATCACAGATCAGATAAC +
Preference number: 5 (lower is better)
Translates to: WHRERPSVDRNSPGR*CRGAQPSCDHRSDN
Trigger: GTTATCTGATCTGTGATCACATGAGGGCTGTGCACCTCTACATCAGCGCCCTGGAGAATTCCTGTCCACTGATGGCCTTTCCCTGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACGGTGGGGCAGCCAGGTaGGTCTTGGCCTCCGTTGAC +
Preference number: 5 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHGGAAR*VLASVD
Trigger: GTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACC...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCGGTGGGGCAGCCAGGTaGGTCTTGGCCTCCGTTGAC +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSGGAAR*VLASVD
Trigger: GTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACC...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTGGTGGGGCAGCCAGGTaGGTCTTGGCCTCCGTTGAC +
Preference number: 5 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPGGAAR*VLASVD
Trigger: GTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACC...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS GCA 90 bp GCATTGAACCCAGAGTTTTGGAGGTCACTGCTTCCTTCTACTAGCTaGCCACAGCTAGGATTCGAAGGGACAAAGAGGAGAAACTGGACT +
Preference number: 5 (lower is better)
Translates to: ALNPEFWRSLLPSTS*PQLGFEGTKRRNWT
Trigger: AGTCCAGTTTCTCCTCTTTGTCCCTTCGAATCCTAGCTGTGGGCAGCTAGTAGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000472126.1
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCGTGCCTTCAAAAAGGTaGGCGCTCTGGAAGTCAGCG +
Preference number: 5 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLVPSKR*ALWKSA
Trigger: CGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCAC...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCGGGAGCGGCTCTATCTaGACACCACCTTGTTCCACC +
Preference number: 5 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTGSGSI*TPPCST
Trigger: GGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCCC...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 90 bp TGGATAATTAGTTTGGTTCCCAGAGTGGCATTGAACCCAGAGTTTTaGAGGTCACTGCTTCCTTCTACTAGCTGCCCACAGCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: WIISLVPRVALNPEF*RSLLPSTSCPQLGF
Trigger: GAATCCTAGCTGTGGGCAGCTAGTAGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000472126.1
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAGTTCCCAGAGTGGCATaGAACCCAGAGTTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPVPRVA*NPEFWR
Trigger: CCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAAC...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCGCAGCCAGGTTGGTCTaGGCCTCCGTTGACGAAGTA +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSAARLV*ASVDEV
Trigger: TACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGC...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTGGGAGCGGCTCTATCTaGACACCACCTTGTTCCACC +
Preference number: 5 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPGSGSI*TPPCST
Trigger: GGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCCC...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCGGGAGCGGCTCTATCTaGACACCACCTTGTTCCACC +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSGSGSI*TPPCST
Trigger: GGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCCC...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAACCACCAGTCCTATCCTaGGGCAGGAAAGCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKPPVLS*GRKAEK
Trigger: CTTTTCTGCTTTCCTGCCCAAGGATAGGACTGGTGG...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTCTCTCTATCTTGACACCACCTaGTTCCACCAGTCCTATCCT +
Preference number: 5 (lower is better)
Translates to: VVMVYNKLHTHIPHHTSLYLDTT*FHQSYP
Trigger: AGGATAGGACTGGTGGAACAAGGTGGTGTCAAGATA...GAGAGAGGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCTTGGTTTATCTGGCATaGTGGGGTGGCATGGGCTAT +
Preference number: 5 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTLVYLA*WGGMGY
Trigger: ATAGCCCATGCCACCCCACAATGCCAGATAAACCAA...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 90 bp GTTGGAAGACTGAAACTTGAATTTCACTTGGTTTATCTGGCATTGTaGGGTGGCATGGGCTATGATTCCTTTCCCATAGCGTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: VGRLKLEFHLVYLAL*GGMGYDSFPIALLL
Trigger: AAGCAGCAACGCTATGGGAAAGGAATCATAGCCCATGCCACCCCACAATGCCAGATAAACCAAGTGAAATTCAAGTTTCAGTCTTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTGTTCCCAGAGTGGCATaGAACCCAGAGTTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPVPRVA*NPEFWR
Trigger: CCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAAC...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGGCAGCCAGGTTGGTCTaGGCCTCCGTTGACGAAGTA +
Preference number: 5 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMAARLV*ASVDEV
Trigger: TACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGC...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAGCAGCCAGGTTGGTCTaGGCCTCCGTTGACGAAGTA +
Preference number: 5 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEAARLV*ASVDEV
Trigger: TACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGC...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTGCAGCCAGGTTGGTCTaGGCCTCCGTTGACGAAGTA +
Preference number: 5 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSAARLV*ASVDEV
Trigger: TACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGC...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACTTGGTTTATCTGGCATaGTGGGGTGGCATGGGCTAT +
Preference number: 5 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHLVYLA*WGGMGY
Trigger: ATAGCCCATGCCACCCCACAATGCCAGATAAACCAA...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS TCA 90 bp GAAAAGGGAGATCTCGAGGCTCAACTTAATCACATTTTTCACAGCTaGGAAGTAGACTCCTGTAGACCCATAAATCCAGTCCACGGCAAT +
Preference number: 5 (lower is better)
Translates to: EKGDLEAQLNHIFHS*EVDSCRPINPVHGN
Trigger: ATTGCCGTGGACTGGATTTATGGGTCTACAGGAGTCTACTTCTCAGCTGTGAAAAATGTGATTAAGTTGAGCCTCGAGATCTCCCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
CDS GCA 90 bp TGTAGACCCATAAATCCAGTCCACGGCAATCACATTAGCATTCGTTaGACGCAGAAGGGTTCTAATAAATGTGTCAATCCAGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: CRPINPVHGNHISIR*TQKGSNKCVNPGRL
Trigger: AAGCCTTCCTGGATTGACACATTTATTAGAACCCTTCTGCGTGCAACGAATGCTAATGTGATTGCCGTGGACTGGATTTATGGGTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAGTGCCTTCAAAAAGGTaGGCGCTCTGGAAGTCAGCG +
Preference number: 5 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEVPSKR*ALWKSA
Trigger: CGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCAC...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAAGGAGAAACTGGACTTaGAGATCGGTGCCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPRRNWT*RSVPSK
Trigger: TTTTGAAGGCACCGATCTCAAAGTCCAGTTTCTCCT...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATTGAACCCAGAGTTTaGGAGGTCACTGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKIEPRV*EVTASF
Trigger: GAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAAT...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACCACCAGTCCTATCCTaGGGCAGGAAAGCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTPPVLS*GRKAEK
Trigger: CTTTTCTGCTTTCCTGCCCAAGGATAGGACTGGTGG...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACTATCTTGACACCACCTaGTTCCACCAGTCCTATCCT +
Preference number: 5 (lower is better)
Translates to: FSLVVMVYNKLHTHIPHHYLDTT*FHQSYP
Trigger: AGGATAGGACTGGTGGAACAAGGTGGTGTCAAGATA...GTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAAAGGTAACCTCGATGTaGGTGTCCTTGTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPKVTSM*VSLFLS
Trigger: ACTGAGAAACAAGGACACCAACATCGAGGTTACCTT...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAATCTTTTCTCTGTCATaGACAGGCAAAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPIFSLS*TGKRAV
Trigger: CACTGCCCTTTTGCCTGTCAATGACAGAGAAAAGAT...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCAGCTCAAGGGCCAGGTaGATCAAGGAGCTCAACAAT +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSSSRAR*IKELNN
Trigger: ATTGTTGAGCTCCTTGATCAACCTGGCCCTTGAGCT...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494440.5
CDS-3UTR CAA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTGTGCCTTCAAAAAGGTaGGCGCTCTGGAAGTCAGCG +
Preference number: 5 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSVPSKR*ALWKSA
Trigger: CGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCAC...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAAGGAGAAACTGGACTTaGAGATCGGTGCCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKRRNWT*RSVPSK
Trigger: TTTTGAAGGCACCGATCTCAAAGTCCAGTTTCTCCT...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCATTGAACCCAGAGTTTaGGAGGTCACTGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPIEPRV*EVTASF
Trigger: GAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAAT...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTATTGAACCCAGAGTTTaGGAGGTCACTGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPIEPRV*EVTASF
Trigger: GAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAAT...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp CGAATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAACCATGGATAATTAGTTaGGTTCCCAGAGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: RMPKEIKQVQLSMHGKAKPWIIS*VPRVAL
Trigger: CAATGCCACTCTGGGAACCAAACTAATTATCCATGG...TTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCATTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAACCACCAGTCCTATCCTaGGGCAGGAAAGCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEPPVLS*GRKAEK
Trigger: CTTTTCTGCTTTCCTGCCCAAGGATAGGACTGGTGG...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGCCACCAGTCCTATCCTaGGGCAGGAAAGCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMPPVLS*GRKAEK
Trigger: CTTTTCTGCTTTCCTGCCCAAGGATAGGACTGGTGG...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCTCCTTTCCCATAGCGTaGCTGCTTAGGTATGGTGAT +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSSFPIA*LLRYGD
Trigger: ATCACCATACCTAAGCAGCAACGCTATGGGAAAGGA...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGCCCAAGGAGATAAAGCAAGTGCAGTTAAGTATGCATGGGAAAGCTAAAATGTCCTTTCCCATAGCGTaGCTGCTTAGGTATGGTGAT +
Preference number: 5 (lower is better)
Translates to: MPKEIKQVQLSMHGKAKMSFPIA*LLRYGD
Trigger: ATCACCATACCTAAGCAGCAACGCTATGGGAAAGGA...CATTTTAGCTTTCCCATGCATACTTAACTGCACTTGCTTTATCTCCTTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTTCCTTTCCCATAGCGTaGCTGCTTAGGTATGGTGAT +
Preference number: 5 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPSFPIA*LLRYGD
Trigger: ATCACCATACCTAAGCAGCAACGCTATGGGAAAGGA...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCCCTCCAAGGAAACAGTCACACTaGCTTGTAAGTTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: IRSAKETKFCKMSSPSPPRKQSH*LVSSLV
Trigger: AACCAGTGAACTTACAAGCAAGTGTGACTGTTTCCT...TGGAGGGGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCAGGAAACAGTCACACTaGCTTGTAAGTTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTRKQSH*LVSSLV
Trigger: AACCAGTGAACTTACAAGCAAGTGTGACTGTTTCCT...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTGTTCCCAGAGTGGCATaGAACCCAGAGTTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSVPRVA*NPEFWR
Trigger: CCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAAC...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCGATGTTGGTGTCCTaGTTTCTCAGTTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPSMLVS*FLSSFK
Trigger: CTTGAAGGAACTGAGAAACAAGGACACCAACATCGA...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCAAGGTAACCTCGATGTaGGTGTCCTTGTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPKVTSM*VSLFLS
Trigger: ACTGAGAAACAAGGACACCAACATCGAGGTTACCTT...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAATTGGTTTATCTGGCATaGTGGGGTGGCATGGGCTAT +
Preference number: 5 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKELVYLA*WGGMGY
Trigger: ATAGCCCATGCCACCCCACAATGCCAGATAAACCAA...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCATCTTTTCTCTGTCATaGACAGGCAAAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSIFSLS*TGKRAV
Trigger: CACTGCCCTTTTGCCTGTCAATGACAGAGAAAAGAT...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 90 bp TTAGTTGAGAAGTCCTGTTGGTTATTTAACTCCCACCTGAATCCATaGATAATTAGTTTGGTTCCCAGAGTGGCATTGAACCCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: LVEKSCWLFNSHLNP*IISLVPRVALNPEF
Trigger: AAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATTCAGGTGGGAGTTAAATAACCAACAGGACTTCTCAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472126.1
CDS-3UTR CAA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAATCCGAATACCCAAATaGTCGGTGTCTGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEIRIPK*SVSVWM
Trigger: CATCCACACAGACACCGACAATTTGGGTATTCGGAT...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAATATCTTGACACCACCTaGTTCCACCAGTCCTATCCT +
Preference number: 5 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKEYLDTT*FHQSYP
Trigger: AGGATAGGACTGGTGGAACAAGGTGGTGTCAAGATA...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGTCCTTTCCCATAGCGTaGCTGCTTAGGTATGGTGAT +
Preference number: 5 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMSFPIA*LLRYGD
Trigger: ATCACCATACCTAAGCAGCAACGCTATGGGAAAGGA...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTCATCACACCAAACTTGAATTTCACTaGGTTTATCTGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: SLVVMVYNKLHTHIPHHTKLEFH*VYLALW
Trigger: CCACAATGCCAGATAAACCAAGTGAAATTCAAGTTT...GGTGTGATGAGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GAAAGAGCTTTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACAATCTTTTCTCTGTCATaGACAGGCAAAAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: ERALLFSLVVMVYNKLHTIFSLS*TGKRAV
Trigger: CACTGCCCTTTTGCCTGTCAATGACAGAGAAAAGAT...TGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAAAGCTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTGCTTTTCTCCTTAGTAGTAATGGTCTACAATAAGCTGCACACACACATCCCTAGGAAACAGTCACACTaGCTTGTAAGTTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: LLFSLVVMVYNKLHTHIPRKQSH*LVSSLV
Trigger: AACCAGTGAACTTACAAGCAAGTGTGACTGTTTCCT...AGGGATGTGTGTGTGCAGCTTATTGTAGACCATTACTACTAAGGAGAAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCAGGAAACAGTCACACTaGCTTGTAAGTTCACTGGTT +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSRKQSH*LVSSLV
Trigger: AACCAGTGAACTTACAAGCAAGTGTGACTGTTTCCT...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS TCA 90 bp TCCTCCCCTTGTTGCCCACTAACTTCTTATGGTATTATGGTTACTTaGTCATTCTTAGTTGAGAAGTCCTGTTGGTTATTTAACTCCCAC +
Preference number: 5 (lower is better)
Translates to: SSPCCPLTSYGIMVT*SFLVEKSCWLFNSH
Trigger: GTGGGAGTTAAATAACCAACAGGACTTCTCAACTAAGAATGATCAAGTAACCATAATACCATAAGAAGTTAGTGGGCAACAAGGGGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472126.1
CDS-3UTR CAA 90 bp GCTAAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGCCATGGATAATTAGTTaGGTTCCCAGAGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: AKMGMYIRSAKETKFCKMPWIIS*VPRVAL
Trigger: CAATGCCACTCTGGGAACCAAACTAATTATCCATGG...CATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTATCCGAATACCCAAATaGTCGGTGTCTGTGTGGATG +
Preference number: 5 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSIRIPK*SVSVWM
Trigger: CATCCACACAGACACCGACAATTTGGGTATTCGGAT...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp TTAAGTATGCATGGGAAAGCTAAAATGGGTATGTACATAAGATCGGCAAAGGAATCGATGTTGGTGTCCTaGTTTCTCAGTTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LSMHGKAKMGMYIRSAKESMLVS*FLSSFK
Trigger: CTTGAAGGAACTGAGAAACAAGGACACCAACATCGA...TTCCTTTGCCGATCTTATGTACATACCCATTTTAGCTTTCCCATGCATACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTAAGGTAACCTCGATGTaGGTGTCCTTGTTTCTCAGT +
Preference number: 5 (lower is better)
Translates to: MGMYIRSAKETKFCKMSSKVTSM*VSLFLS
Trigger: ACTGAGAAACAAGGACACCAACATCGAGGTTACCTT...AGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTCCATGGATAATTAGTTaGGTTCCCAGAGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSPWIIS*VPRVAL
Trigger: CAATGCCACTCTGGGAACCAAACTAATTATCCATGG...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp AAAATGGGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCGATGTTGGTGTCCTaGTTTCTCAGTTCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KMGMYIRSAKETKFCKMSSMLVS*FLSSFK
Trigger: CTTGAAGGAACTGAGAAACAAGGACACCAACATCGA...ACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACCCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp ATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCTCCAAACTTGAATTTCACTaGGTTTATCTGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: MYIRSAKETKFCKMSSPSKLEFH*VYLALW
Trigger: CCACAATGCCAGATAAACCAAGTGAAATTCAAGTTT...GGAGGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS-3UTR CAA 90 bp GGTATGTACATAAGATCGGCAAAGGAAACCAAGTTCTGTAAAATGAGTTCTCCCAAACTTGAATTTCACTaGGTTTATCTGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: GMYIRSAKETKFCKMSSPKLEFH*VYLALW
Trigger: CCACAATGCCAGATAAACCAAGTGAAATTCAAGTTT...GGGAGAACTCATTTTACAGAACTTGGTTTCCTTTGCCGATCTTATGTACATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp TGGCCTCCGAAGAGCTGTCCCACCATGCCCCCAACGTaGGCCCCCAGGCTAACACCAATGATGTGGATTGAG +
Preference number: 6 (lower is better)
Translates to: WPPKSCPTMPPT*APRLTPMMWIE
Trigger: CTCAATCCACATCATTGGTGTTAGCCTGGGGGCCCACGTTGGGGGCATGGTGGGACAGCTCTTCGGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp CCCCCAACGTGGGCCCCCAGGCTAACACCAATGATGTaGATTGAGGATTCCGACACACCCAGCACCAGGAGT +
Preference number: 6 (lower is better)
Translates to: PPTWAPRLTPMM*IEDSDTPSTRS
Trigger: ACTCCTGGTGCTGGGTGTGTCGGAATCCTCAATCCACATCATTGGTGTTAGCCTGGGGGCCCACGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
CDS TCA 72 bp AGAAGGTGGGGCAGCCAGGTTGGTCTTGGCCTCCGTTaGCGAAGTAGTCCACATGTCCAACGGGAATCCGAA +
Preference number: 6 (lower is better)
Translates to: RRWGSQVGLGLR*RSSPHVQRESE
Trigger: TTCGGATTCCCGTTGGACATGTGGACTACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp GAAGGCCTTGTAGCTGGCACAGGGAAAGGCCATCAGTaGACAGGAATTCTCCAGGGCGCTGATGTAGAGGTG +
Preference number: 6 (lower is better)
Translates to: EGLVAGTGKGHQ*TGILQGADVEV
Trigger: CACCTCTACATCAGCGCCCTGGAGAATTCCTGTCCACTGATGGCCTTTCCCTGTGCCAGCTACAAGGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp AAGGTTGGCGCTCTGGAAGTCAGCGCACTTTGGCTGTaGGGTAGGAGGTGCATCCCCATAGTGAGAAGGAGT +
Preference number: 6 (lower is better)
Translates to: KVGALEVSALWL*GRRCIPIVRRS
Trigger: ACTCCTTCTCACTATGGGGATGCACCTCCTACCCCACAGCCAAAGTGCGCTGACTTCCAGAGCGCCAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472126.1
CDS CAA 72 bp ACCTGCGTAAAAGAAGGTGGGGCAGCCAGGTTGGTCTaGGCCTCCGTTGACGAAGTAGTCCACATGTCCAAC +
Preference number: 6 (lower is better)
Translates to: TCVKEGGAARLV*ASVDEVVHMSN
Trigger: GTTGGACATGTGGACTACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CAA 72 bp CACTTCCTTGGGGAGCGGCTCTATCTTGACACCACCTaGTTCCACCAGTCCTATCCTTGGGCAGGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: HFLGERLYLDTT*FHQSYPWAGKQ
Trigger: CTGCTTTCCTGCCCAAGGATAGGACTGGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCCCCAAGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS TCA 72 bp GAAAGGCCATCAGTGGACAGGAATTCTCCAGGGCGCTaGTGTAGAGGTGCACAGCCCTCATGTGATCACAGA +
Preference number: 6 (lower is better)
Translates to: ERPSVDRNSPGR*CRGAQPSCDHR
Trigger: TCTGTGATCACATGAGGGCTGTGCACCTCTACATCAGCGCCCTGGAGAATTCCTGTCCACTGATGGCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS TCA 72 bp GGTAGACTTTCACTTCCTTGGGGAGCGGCTCTATCTTaGCACCACCTTGTTCCACCAGTCCTATCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: GRLSLPWGAALS*HHLVPPVLSLG
Trigger: GCCCAAGGATAGGACTGGTGGAACAAGGTGGTGTCAAGATAGAGCCGCTCCCCAAGGAAGTGAAAGTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp ACTTTGAGATCGGTGCCTTCAAAAAGGTTGGCGCTCTaGAAGTCAGCGCACTTTGGCTGTGGGGTAGGAGGT +
Preference number: 6 (lower is better)
Translates to: TLRSVPSKRLAL*KSAHFGCGVGG
Trigger: ACCTCCTACCCCACAGCCAAAGTGCGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCACCGATCTCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000472126.1
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp ACGGGAATCCGAATACCCAAATTGTCGGTGTCTGTGTaGATGGCTTCCACGAAGAGGGCATCTCCAGCATCC +
Preference number: 6 (lower is better)
Translates to: TGIRIPKLSVSV*MASTKRASPAS
Trigger: GGATGCTGGAGATGCCCTCTTCGTGGAAGCCATCCACACAGACACCGACAATTTGGGTATTCGGATTCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp AATCCAGACAGCGTCCAGCAAGGAAGGCCTTGTAGCTaGCACAGGGAAAGGCCATCAGTGGACAGGAATTCT +
Preference number: 6 (lower is better)
Translates to: NPDSVQQGRPCS*HRERPSVDRNS
Trigger: AGAATTCCTGTCCACTGATGGCCTTTCCCTGTGCCAGCTACAAGGCCTTCCTTGCTGGACGCTGTCTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS TCA 72 bp AACGTGGGCCCCCAGGCTAACACCAATGATGTGGATTaGGGATTCCGACACACCCAGCACCAGGAGTTTATT +
Preference number: 6 (lower is better)
Translates to: NVGPQANTNDVD*GFRHTQHQEFI
Trigger: AATAAACTCCTGGTGCTGGGTGTGTCGGAATCCTCAATCCACATCATTGGTGTTAGCCTGGGGGCCCACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
CDS TCA 72 bp AACGTGGGCCCCCAGGCTAACACCAATGATGTGGATTaGGGATTCCGACACACCCAGCACATTTTTCACAGC +
Preference number: 6 (lower is better)
Translates to: NVGPQANTNDVD*GFRHTQHIFHS
Trigger: GCTGTGAAAAATGTGCTGGGTGTGTCGGAATCCTCAATCCACATCATTGGTGTTAGCCTGGGGGCCCACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495992.5
CDS CCA 72 bp GAATCCGAATACCCAAATTGTCGGTGTCTGTGTGGATaGCTTCCACGAAGAGGGCATCTCCAGCATCCAAGC +
Preference number: 6 (lower is better)
Translates to: ESEYPNCRCLCG*LPRRGHLQHPS
Trigger: GCTTGGATGCTGGAGATGCCCTCTTCGTGGAAGCCATCCACACAGACACCGACAATTTGGGTATTCGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CAA 72 bp ACTATAACCTGCGTAAAAGAAGGTGGGGCAGCCAGGTaGGTCTTGGCCTCCGTTGACGAAGTAGTCCACATG +
Preference number: 6 (lower is better)
Translates to: TITCVKEGGAAR*VLASVDEVVHM
Trigger: CATGTGGACTACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAGGTTATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CAA 90 bp TGCCCACAGCTAGGATTCGAAGGGACAAAGAGGAGAAACTGGACTTaGAGATCGGTGCCTTCAAAAAGGTTGGCGCTCTGGAAGTCAGCG +
Preference number: 6 (lower is better)
Translates to: CPQLGFEGTKRRNWT*RSVPSKRLALWKSA
Trigger: CGCTGACTTCCAGAGCGCCAACCTTTTTGAAGGCACCGATCTCAAAGTCCAGTTTCTCCTCTTTGTCCCTTCGAATCCTAGCTGTGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000472126.1
ENST00000494440.5
ENST00000495992.5
CDS CAA 90 bp ATAACTATAACCTGCGTAAAAGAAGGTGGGGCAGCCAGGTTGGTCTaGGCCTCCGTTGACGAAGTAGTCCACATGTCCAACGGGAATCCG +
Preference number: 6 (lower is better)
Translates to: ITITCVKEGGAARLV*ASVDEVVHMSNGNP
Trigger: CGGATTCCCGTTGGACATGTGGACTACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAGGTTATAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CAA 90 bp GATCAGATAACTATAACCTGCGTAAAAGAAGGTGGGGCAGCCAGGTaGGTCTTGGCCTCCGTTGACGAAGTAGTCCACATGTCCAACGGG +
Preference number: 6 (lower is better)
Translates to: DQITITCVKEGGAAR*VLASVDEVVHMSNG
Trigger: CCCGTTGGACATGTGGACTACTTCGTCAACGGAGGCCAAGACCAACCTGGCTGCCCCACCTTCTTTTACGCAGGTTATAGTTATCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273371.9
ENST00000475963.1
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CAA 90 bp TCCCACCTGAATCCATGGATAATTAGTTTGGTTCCCAGAGTGGCATaGAACCCAGAGTTTTGGAGGTCACTGCTTCCTTCTACTAGCTGC +
Preference number: 6 (lower is better)
Translates to: SHLNPWIISLVPRVA*NPEFWRSLLPSTSC
Trigger: GCAGCTAGTAGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATTCAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472126.1
CDS CAA 90 bp TCGGTTGGAAGACTGAAACTTGAATTTCACTTGGTTTATCTGGCATaGTGGGGTGGCATGGGCTATGATTCCTTTCCCATAGCGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SVGRLKLEFHLVYLA*WGGMGYDSFPIALL
Trigger: CAGCAACGCTATGGGAAAGGAATCATAGCCCATGCCACCCCACAATGCCAGATAAACCAAGTGAAATTCAAGTTTCAGTCTTCCAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CAA 90 bp AAAACCCTGAATCCATGGATAATTAGTTTGGTTCCCAGAGTGGCATaGAACCCAGAGTTTTGGAGGTCACTGCTTCCTTCTACTAGCTGC +
Preference number: 6 (lower is better)
Translates to: KTLNPWIISLVPRVA*NPEFWRSLLPSTSC
Trigger: GCAGCTAGTAGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATTCAGGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS CAA 90 bp TCCTGTTGGTTATTTAACTCCCACCTGAATCCATGGATAATTAGTTaGGTTCCCAGAGTGGCATTGAACCCAGAGTTTTGGAGGTCACTG +
Preference number: 6 (lower is better)
Translates to: SCWLFNSHLNPWIIS*VPRVALNPEFWRSL
Trigger: CAGTGACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATTCAGGTGGGAGTTAAATAACCAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472126.1
CDS CAA 72 bp AATCCATGGATAATTAGTTTGGTTCCCAGAGTGGCATaGAACCCAGAGTTTTGGAGGTCACTGCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: NPWIISLVPRVA*NPEFWRSLLPS
Trigger: AGAAGGAAGCAGTGACCTCCAAAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000472126.1
ENST00000494440.5
ENST00000495992.5
CDS TCA 72 bp GATCTCGAGGCTCAACTTAATCACATTTTTCACAGCTaGGAAGTAGACTCCTGTAGACCCATAAATCCAGTC +
Preference number: 6 (lower is better)
Translates to: DLEAQLNHIFHS*EVDSCRPINPV
Trigger: GACTGGATTTATGGGTCTACAGGAGTCTACTTCTCAGCTGTGAAAAATGTGATTAAGTTGAGCCTCGAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
CDS CAA 72 bp AGACTGAAACTTGAATTTCACTTGGTTTATCTGGCATaGTGGGGTGGCATGGGCTATGATTCCTTTCCCATA +
Preference number: 6 (lower is better)
Translates to: RLKLEFHLVYLA*WGGMGYDSFPI
Trigger: TATGGGAAAGGAATCATAGCCCATGCCACCCCACAATGCCAGATAAACCAAGTGAAATTCAAGTTTCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS GCA 72 bp ATAAATCCAGTCCACGGCAATCACATTAGCATTCGTTaGACGCAGAAGGGTTCTAATAAATGTGTCAATCCA +
Preference number: 6 (lower is better)
Translates to: INPVHGNHISIR*TQKGSNKCVNP
Trigger: TGGATTGACACATTTATTAGAACCCTTCTGCGTGCAACGAATGCTAATGTGATTGCCGTGGACTGGATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273371.9
ENST00000488919.5
ENST00000494440.5
ENST00000495992.5
CDS CCA 72 bp AAGTCCTGTTGGTTATTTAACTCCCACCTGAATCCATaGATAATTAGTTTGGTTCCCAGAGTGGCATTGAAC +
Preference number: 6 (lower is better)
Translates to: KSCWLFNSHLNP*IISLVPRVALN
Trigger: GTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATTCAGGTGGGAGTTAAATAACCAACAGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472126.1
CDS CAA 72 bp TTTGTTCCTAAAACCCTGAATCCATGGATAATTAGTTaGGTTCCCAGAGTGGCATTGAACCCAGAGTTTTGG +
Preference number: 6 (lower is better)
Translates to: FVPKTLNPWIIS*VPRVALNPEFW
Trigger: CCAAAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATTCAGGGTTTTAGGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273371.9
ENST00000494440.5
ENST00000495992.5
CDS CAA 72 bp TTATTTAACTCCCACCTGAATCCATGGATAATTAGTTaGGTTCCCAGAGTGGCATTGAACCCAGAGTTTTGG +
Preference number: 6 (lower is better)
Translates to: LFNSHLNPWIIS*VPRVALNPEFW
Trigger: CCAAAACTCTGGGTTCAATGCCACTCTGGGAACCAAACTAATTATCCATGGATTCAGGTGGGAGTTAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472126.1