RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000144283

Ensembl transcript IDs: ENST00000389757.7, ENST00000389759.8, ENST00000411900.5, ENST00000421462.5, ENST00000426248.7, ENST00000452162.5, ENST00000457109.5, ENST00000462335.1, ENST00000479398.5, ENST00000480171.7, ENST00000481115.2, ENST00000486254.3, ENST00000492496.1, ENST00000494945.1, ENST00000495123.5, ENST00000628904.2, ENST00000629219.1

Found 783 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGAGGCAGCCAGGGCTCAGTAGCTGGGCAGTCGACTCCGCAAGCTaGCTCGAGTGTTCTTCAGAAGGCACCCCAGAAGGGCTCCCGGCT +
Preference number: 1 (lower is better)
Translates to: MRQPGLSSWAVDSAS*LECSSEGTPEGLPA
Trigger: AGCCGGGAGCCCTTCTGGGGTGCCTTCTGAAGAACACTCGAGCCAGCTTGCGGAGTCGACTGCCCAGCTACTGAGCCCTGGCTGCCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 90 bp CGGGTCTCTGTGAGTACGGAGAGGCTGCCCGTGCAGCAGGTAATGTaGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCA +
Preference number: 1 (lower is better)
Translates to: RVSVSTERLPVQQVM*WRNMHWGSEVGGRS
Trigger: TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGCTGCACGGGCAGCCTCTCCGTACTCACAGAGACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR TCA 90 bp TCAGGAACATCTGGCGACCTCTGCCATCTAACAAGGGCTGTCTGCTaGGCTCCGCCAGGTATGAGGCAGCCAGGGCTCAGTAGCTGGGCA +
Preference number: 1 (lower is better)
Translates to: SGTSGDLCHLTRAVC*APPGMRQPGLSSWA
Trigger: TGCCCAGCTACTGAGCCCTGGCTGCCTCATACCTGGCGGAGCTCAGCAGACAGCCCTTGTTAGATGGCAGAGGTCGCCAGATGTTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 90 bp GAGAGGCTGCCCGTGCAGCAGGTAATGTGGTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATC +
Preference number: 1 (lower is better)
Translates to: ERLPVQQVMWWRNMH*GSEVGGRSLTESQI
Trigger: GATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGCTGCACGGGCAGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR CCA 90 bp GTCTCTGTGAGTACGGAGAGGCTGCCCGTGCAGCAGGTAATGTGGTaGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTG +
Preference number: 1 (lower is better)
Translates to: VSVSTERLPVQQVMW*RNMHWGSEVGGRSL
Trigger: CAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGCTGCACGGGCAGCCTCTCCGTACTCACAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR TCA 90 bp GGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTaGCGGAGAGCCAAATCCACTACCCAGAGAAGTTCTCAGAGACCC +
Preference number: 1 (lower is better)
Translates to: GGGICTGVQRSGVGH*RRAKSTTQRSSQRP
Trigger: GGGTCTCTGAGAACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR CCA 90 bp CCAATACCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGGTTTGGGCTGCGGTACACTGGGCTG +
Preference number: 1 (lower is better)
Translates to: PIPTEPVRYNAVCDP*SSTVPWFGLRYTGL
Trigger: CAGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGGTATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
3UTR CCA 90 bp TTTCCAATACCTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGGTTTGGGCTGCGGTACACTGGGCTG +
Preference number: 1 (lower is better)
Translates to: FPIPEPVRYNAVCDP*SSTVPWFGLRYTGL
Trigger: CAGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGGTATTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR TCA 90 bp CTAGCTGACTGGCAACAATCTGCCTTTCCACTTCCAGTTCTCGGGTaGGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTATCCTGC +
Preference number: 1 (lower is better)
Translates to: LADWQQSAFPLPVLG*VAETEALADAQVSC
Trigger: GCAGGATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTGGAAAGGCAGATTGTTGCCAGTCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
3UTR TCA 90 bp CGGAGAGCCAAATCCACTACCCAGAGAAGTTCTCAGAGACCCCCTTaGAGGAGACACGCCTGTGCTGATAACATAAGAAGGAGACTGTGC +
Preference number: 1 (lower is better)
Translates to: RRAKSTTQRSSQRPP*RRHACADNIRRRLC
Trigger: GCACAGTCTCCTTCTTATGTTATCAGCACAGGCGTGTCTCCTTCAAGGGGGTCTCTGAGAACTTCTCTGGGTAGTGGATTTGGCTCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR CCA 90 bp CCTATGAATGAATGCTGCTGTCTGTTGTCTGCCTTGCTCACGTTCTaGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTCGGAA +
Preference number: 1 (lower is better)
Translates to: PMNECCCLLSALLTF*LLWKLPASWYPLSE
Trigger: TTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR TCA 90 bp CCAGATCTGAAGATACCAGGTTCAGGGAAGTCAGTGATTGGAAACTaGAGTGGTTACGTCCCAGAAGTCCTGATGCCAGTTCCTCAGGAA +
Preference number: 1 (lower is better)
Translates to: PDLKIPGSGKSVIGN*SGYVPEVLMPVPQE
Trigger: TTCCTGAGGAACTGGCATCAGGACTTCTGGGACGTAACCACTTCAGTTTCCAATCACTGACTTCCCTGAACCTGGTATCTTCAGATCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR GCA 90 bp GCTCGCACTGGTATTTCCATTTCACTTTGGATGCTCATCTTGGGCTaGTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTCTT +
Preference number: 1 (lower is better)
Translates to: ARTGISISLWMLILG*CPFGKKTQFSLGCL
Trigger: AAGACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 90 bp TCTGAAGATACCAGGTTCAGGGAAGTCAGTGATTGGAAACTGAAGTaGTTACGTCCCAGAAGTCCTGATGCCAGTTCCTCAGGAACATCT +
Preference number: 1 (lower is better)
Translates to: SEDTRFREVSDWKLK*LRPRSPDASSSGTS
Trigger: AGATGTTCCTGAGGAACTGGCATCAGGACTTCTGGGACGTAACCACTTCAGTTTCCAATCACTGACTTCCCTGAACCTGGTATCTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR GCA 90 bp CTTGAATTCCTCACCACATGGTTGTTAGTTGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCCTTGCTCACGTTCTGGCTGTTGTGG +
Preference number: 1 (lower is better)
Translates to: LEFLTTWLLVDPMNE*CCLLSALLTFWLLW
Trigger: CCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGGATCAACTAACAACCATGTGGTGAGGAATTCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR CCA 90 bp TTCATGCTCGCACTGGTATTTCCATTTCACTTTGGATGCTCATCTTaGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGT +
Preference number: 1 (lower is better)
Translates to: FMLALVFPFHFGCSS*AAVHSARKRSFLLG
Trigger: ACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 90 bp GATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCATTTCACTTTaGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAG +
Preference number: 1 (lower is better)
Translates to: DLRNFHARTGISISL*MLILGCCPFGKKTQ
Trigger: CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 90 bp GGCAAATTTCTAAGCTTGTCTCTTTGTAGCTACTGCTCAAGGGGGTaGCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAG +
Preference number: 1 (lower is better)
Translates to: GKFLSLSLCSYCSRG*QLLSYFRKLLQTSK
Trigger: CTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAGAAATTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR GCA 90 bp GAATTCCTCACCACATGGTTGTTAGTTGATCCTATGAATGAATGCTaGTGTCTGTTGTCTGCCTTGCTCACGTTCTGGCTGTTGTGGAAA +
Preference number: 1 (lower is better)
Translates to: EFLTTWLLVDPMNEC*CLLSALLTFWLLWK
Trigger: TTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGGATCAACTAACAACCATGTGGTGAGGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR TCA 90 bp TACAGGCCTCTTTCTGGCTCTGTTAGGTCTGATTGGAGACCCAGGTaGGTTATTTTCAACCCAAATTTGGATCCGTTTTTGAAATGCTGC +
Preference number: 1 (lower is better)
Translates to: YRPLSGSVRSDWRPR*VIFNPNLDPFLKCC
Trigger: GCAGCATTTCAAAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAGAGCCAGAAAGAGGCCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR GCA 90 bp TTAGGAACTTTCATGCTCGCACTGGTATTTCCATTTCACTTTGGATaGTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: LGTFMLALVFPFHFG*SSWAAVHSARKRSF
Trigger: AAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGCATGAAAGTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR GCA 90 bp TTGCTGATAGAAGGCAAATTTCTAAGCTTGTCTCTTTGTAGCTACTaGTCAAGGGGGTGGCAACTGTTGAGCTACTTCAGAAAGCTGCTT +
Preference number: 1 (lower is better)
Translates to: LLIEGKFLSLSLCSY*SRGWQLLSYFRKLL
Trigger: AAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAGAAATTTGCCTTCTATCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR-3UTR TCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCAAGGTCTGCCGGGAGGTaGCTGACCCAATCCGCCGTA +
Preference number: 2 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPRSAGR*LTQSAV
Trigger: TACGGCGGATTGGGTCAGTCACCTCCCGGCAGACCT...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR TCA 90 bp CGAGGGTCTCTGATTCCTAACAGTGCTGGTGAGGAAGAGGTGCTGCCGACTGACGGAGGCGGGTCTCTGTaGGTACGGAGAGGCTGCCCG +
Preference number: 2 (lower is better)
Translates to: RGSLIPNSAGEEEVLPTDGGGSL*VRRGCP
Trigger: CGGGCAGCCTCTCCGTACTCACAGAGACCCGCCTCC...GTCAGTCGGCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR-3UTR GCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACTTGGGATTGGAGGTCTaGCGGGAGGTGACTGACCCA +
Preference number: 2 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDLGLEV*REVTDP
Trigger: TGGGTCAGTCACCTCCCGGCAGACCTCCAATCCCAA...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACTGGGCTGCGGTACACTaGGCTGTAATAGGTCCTCCC +
Preference number: 2 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDWAAVH*AVIGPP
Trigger: GGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCA...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTGGGGACCCCACTCTaGCGGTGGTTTGGTATTGAG +
Preference number: 2 (lower is better)
Translates to: DDDPTWPWDGEATRVCASVGTPL*RWFGIE
Trigger: CTCAATACCAAACCACCGCCAGAGTGGGGTCCCCAC...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGG +
Preference number: 2 (lower is better)
Translates to: DDDPTWPWDGEATRVCASAVCDP*SSTVPW
Trigger: CCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGC...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR TCA 90 bp CGAGGGTCTCTGATTCCTAACAGTGCTGGTGAGGAAGAGGTGCTGCCGACTGACAGGTCTGCCGGGAGGTaGCTGACCCAATCCGCCGTA +
Preference number: 2 (lower is better)
Translates to: RGSLIPNSAGEEEVLPTDRSAGR*LTQSAV
Trigger: TACGGCGGATTGGGTCAGTCACCTCCCGGCAGACCT...GTCAGTCGGCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR-3UTR GCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCAGCTACTCGAGTCTGTaGATCCGTCAGGGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: DDDPTWPWDGEATRVCASSYSSL*IRQGQW
Trigger: CCACTGACCCTGACGGATGCACAGACTCGAGTAGCT...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTGAGGGGTTGGTCCGTTaGGATTGGAGGTCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVEGLVR*DWRSAG
Trigger: CCCGGCAGACCTCCAATCCCAACGGACCAACCCCTC...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
3UTR-3UTR CCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 2 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACGCTGTCTGGCCTGGGTaGAACCATCCTCTCATAAAT +
Preference number: 2 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDAVWPG*NHPLIN
Trigger: ATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGC...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp GTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTCTCAGCCTGTCAGGCTGTCTaGCCTGGGTGGAACCATCCT +
Preference number: 2 (lower is better)
Translates to: VGGRSLTESQIHYPEKFSACQAV*PGWNHP
Trigger: AGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGC...TGAGAACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR CCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTGCAGCAGGTAATGTaGTGGAGGAATATGCACTGG +
Preference number: 2 (lower is better)
Translates to: DDDPTWPWDGEATRVCASVQQVM*WRNMHW
Trigger: CCAGTGCATATTCCTCCACCACATTACCTGCTGCAC...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp ATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCGAGGGGTTGGTCCGTTaGGATTGGAGGTCTGCCGGG +
Preference number: 2 (lower is better)
Translates to: IGVMCKSGDTAERRSCPSEGLVR*DWRSAG
Trigger: CCCGGCAGACCTCCAATCCCAACGGACCAACCCCTC...GCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 2 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCATCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPSGCLA*VEPSSH
Trigger: ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGA...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR TCA 90 bp TCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTCGGAATCTGCCGGGAGGTGACTaGCCCAATCCGCCGTATAGC +
Preference number: 2 (lower is better)
Translates to: SRSGCCGNSLLPGIHCRNLPGGD*PNPPYS
Trigger: GCTATACGGCGGATTGGGTCAGTCACCTCCCGGCAG...ATTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR TCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCAAACAGTCCTTTGCAGTaGAGGTCCCAGATGCTGTGG +
Preference number: 2 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPNSPLQ*RSQMLW
Trigger: CCACAGCATCTGGGACCTTCACTGCAAAGGACTGTT...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACACCAGGGCTCAGTAGCTaGGCAGTCGACTCCGCAAGC +
Preference number: 2 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTPGLSS*AVDSAS
Trigger: GCTTGCGGAGTCGACTGCCCAGCTACTGAGCCCTGG...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTACCCCACTCTGGCGGTaGTTTGGTATTGAGGGGTTG +
Preference number: 2 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSTPLWR*FGIEGL
Trigger: CAACCCCTCAATACCAAACCACCGCCAGAGTGGGGT...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSSGCLA*VEPSSH
Trigger: ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGACCCCACTCTGGCGGTaGTTTGGTATTGAGGGGTTG +
Preference number: 2 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLTPLWR*FGIEGL
Trigger: CAACCCCTCAATACCAAACCACCGCCAGAGTGGGGT...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGGACCCCACCTGGCCTTaGGATGGGGAAGCTACTCGA +
Preference number: 2 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRDPTWP*DGEATR
Trigger: TCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 2 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR CAA 90 bp AGGACTGAAGGGTGGAAACTGCAAGACCTGAGAAGGCCTCAGACTTaGGGCCTGGTGTCCCTCATTGCCTCCACAGATGGAGAAAAGCTC +
Preference number: 2 (lower is better)
Translates to: RTEGWKLQDLRRPQT*GLVSLIASTDGEKL
Trigger: GAGCTTTTCTCCATCTGTGGAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGTTTCCACCCTTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 90 bp GATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTCCATGGTTaGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATA +
Preference number: 2 (lower is better)
Translates to: DTTPSAILGAPQFHG*GCGTLGCNRSSPHI
Trigger: TATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 2 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 2 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGCACCTGGCCTTGGGATaGGGAAGCTACTCGAGTCTG +
Preference number: 2 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRHLALG*GSYSSL
Trigger: CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTG...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp CCTTTCCACTTCCAGTTCTCGGGTGAGTCGCTGAAACTGAAGCTCTTGCAGACGATTCTGACTGGCACCTaGAGCGGCTCTACATGCCAG +
Preference number: 2 (lower is better)
Translates to: PFHFQFSGESLKLKLLQTILTGT*SGSTCQ
Trigger: CTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAAT...CGTCTGCAAGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
3UTR-3UTR TCA 90 bp TTCCAGTTCTCGGGTGAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTATTGCATGTTCCGATTCTaGCTGGCACCTGGAGCGGCT +
Preference number: 2 (lower is better)
Translates to: FQFSGESLKLKLLQTHKYCMFRF*LAPGAA
Trigger: AGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCA...ATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
3UTR-3UTR CCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACATGCTGTGTGGTGCTATaGGGACCTCTGCCTACCCTA +
Preference number: 2 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTCCVVL*GPLPTL
Trigger: TAGGGTAGGCAGAGGTCCCCATAGCACCACACAGCA...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACACTCAGACTTTGGGCCTaGTGTCCCTCATTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTLRLWA*CPSLPP
Trigger: TGGAGGCAATGAGGGACACCAGGCCCAAAGTCTGAG...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHWRNMH*GSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCA...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 2 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR CAA 90 bp CTGGCTCGAGTGTTCTTCAGAAGGCACCCCAGAAGGGCTCCCGGCTaGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCATTT +
Preference number: 2 (lower is better)
Translates to: LARVFFRRHPRRAPG*QILGTFMLALVFPF
Trigger: AAATGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCTTCTGGGGTGCCTTCTGAAGAACACTCGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR TCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAGGAAACTGCAAGACCTaGGAAGGCCTCAGACTTTGG +
Preference number: 2 (lower is better)
Translates to: RAPGLQILGTFMLALVFPGNCKT*EGLRLW
Trigger: CCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGTTTCC...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR TCA 90 bp GTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTCTCATGCTCTAGATGGAACTaGACTAACTCTTCTCATGGC +
Preference number: 2 (lower is better)
Translates to: VGGRSLTESQIHYPEKFSCSRWN*TNSSHG
Trigger: GCCATGAGAAGAGTTAGTTCAGTTCCATCTAGAGCA...TGAGAACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR GCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATTATATAGGAGTAATGTaGAAGTCGGGAGACACGGCA +
Preference number: 2 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHYIGVM*KSGDTA
Trigger: TGCCGTGTCTCCCGACTTGCACATTACTCCTATATA...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR GCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSDPMNE*CCLLSA
Trigger: GGCAGACAACAGACAGCAGCATTCATTCATAGGATC...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR CCA 90 bp CTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTGCCTACCCTACTGTaGGGCTTCTTTCCCCTACCC +
Preference number: 2 (lower is better)
Translates to: LWMLILGCCPFGKKTQFSLPTLL*GFFPLP
Trigger: GGGTAGGGGAAAGAAGCCCCACAGTAGGGTAGGCAG...AGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCACCTGGCCTTGGGATaGGGAAGCTACTCGAGTCTG +
Preference number: 2 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLHLALG*GSYSSL
Trigger: CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTG...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR CAA 90 bp AGGTTTGCTGGAGCCAGGGTACAGGCCTTTATGTGTGGCATCCCCTaGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTC +
Preference number: 2 (lower is better)
Translates to: RFAGARVQAFMCGIP*AIVILHRWLGPIVF
Trigger: GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCCACACATAAAGGCCTGTACCCTGGCTCCAGCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR-3UTR TCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTGAGCTCCGCCAGGTATaGGGCAGCCAGGGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFELRQV*GSQGSV
Trigger: TACTGAGCCCTGGCTGCCTCATACCTGGCGGAGCTC...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGCAGCAGGTAATGTGGTaGAGGAATATGCACTGGGGT +
Preference number: 2 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKQQVMW*RNMHWG
Trigger: ACCCCAGTGCATATTCCTCCACCACATTACCTGCTG...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR TCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTACAAGGGCTGTCTGCTaGGCTCCGCCAGGTATGAGG +
Preference number: 2 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFTRAVC*APPGMR
Trigger: CCTCATACCTGGCGGAGCTCAGCAGACAGCCCTTGT...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR TCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCTCAGAGACCCCCTTaGAGGAGACACGCCTGTGCT +
Preference number: 2 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQSQRPP*RRHACA
Trigger: AGCACAGGCGTGTCTCCTTCAAGGGGGTCTCTGAGA...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR GCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCTGCCAACCAAATAAATaGCCAACCACTGTTCTTATG +
Preference number: 2 (lower is better)
Translates to: TARPEKASDFGPGVPHCLCQPNK*PTTVLM
Trigger: CATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCA...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR GCA 90 bp GGCATCCCCTTGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTCTTCCATGGTTTGGGCTaGGGTACACTGGGCTGTAAT +
Preference number: 2 (lower is better)
Translates to: GIPLAIVILHRWLGPIVFFHGLG*GTLGCN
Trigger: ATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAA...GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR CAA 90 bp CTAAGCTTGTCTCTTTGTAGCTACTGCTCAAGGGGGTGGCAACTGTaGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LSLSLCSYCSRGWQL*SYFRKLLQTSKISP
Trigger: TGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR-3UTR GCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGCCTGGTGTCCCTCATTaGCTCCACAGATGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQPGVPH*LHRWRK
Trigger: TTTTCTCCATCTGTGGAGGCAATGAGGGACACCAGG...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR GCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGAGTGAAGGTCCCAGATaGTGTGGTACGGCGGTCATC +
Preference number: 2 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQSEGPR*CGTAVI
Trigger: GATGACCGCCGTACCACAGCATCTGGGACCTTCACT...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATGAAGGCCTCAGACTTTaGGCCTGGTGTCCCTCATTG +
Preference number: 2 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDEGLRL*AWCPSL
Trigger: CAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTC...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp CATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: HPLINVILLLSELLHVMNWRNMH*GSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCA...GTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQWRNMH*GSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCA...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR CAA 90 bp ACCACATGGTTGTTAGTTGATCCTATGAATGAATGCTGCTGTCTGTaGTCTGCCTTGCTCACGTTCTGGCTGTTGTGGAAACTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: TTWLLVDPMNECCCL*SALLTFWLLWKLPA
Trigger: AGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGGATCAACTAACAACCATGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR GCA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTGTGGTGGAGGAATATaGACTGGGGTTCAGAGGTCG +
Preference number: 2 (lower is better)
Translates to: LINVILLLSELLHVMNSPCGGGI*TGVQRS
Trigger: CGACCTCTGAACCCCAGTGCATATTCCTCCACCACA...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR CAA 90 bp TTTCATGCTCGCACTGGTATTTCCATTTCACTTTGGATGCTCATCTaGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: FHARTGISISLWMLI*GCCPFGKKTQFSLG
Trigger: CCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 90 bp GTTACGCACAATGGTCTCTTGCTGATAGAAGGCAAATTTCTAAGCTaGTCTCTTTGTAGCTACTGCTCAAGGGGGTGGCAACTGTTGAGC +
Preference number: 2 (lower is better)
Translates to: VTHNGLLLIEGKFLS*SLCSYCSRGWQLLS
Trigger: GCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAGAAATTTGCCTTCTATCAGCAAGAGACCATTGTGCGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR CAA 90 bp TTGTTAGTTGATCCTATGAATGAATGCTGCTGTCTGTTGTCTGCCTaGCTCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTAT +
Preference number: 2 (lower is better)
Translates to: LLVDPMNECCCLLSA*LTFWLLWKLPASWY
Trigger: ATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGGATCAACTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR TCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATCAACACTTCTGGGTTTaGCTTGCCATGGGCGTTAGT +
Preference number: 2 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDQHFWV*LAMGVS
Trigger: ACTAACGCCCATGGCAAGTCAAACCCAGAAGTGTTG...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR TCA 90 bp GGCATCCCCTTGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTCAATTGCTCCATGTCATaGACAGTCCTTTGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: GIPLAIVILHRWLGPIVFNCSMS*TVLCSE
Trigger: TTCACTGCAAAGGACTGTTCATGACATGGAGCAATT...GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR-3UTR CCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCGGGTTTGACTTGCCATaGGCGTTAGTTCCTAGTTTT +
Preference number: 2 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTGFDLP*ALVPSF
Trigger: AAAACTAGGAACTAACGCCCATGGCAAGTCAAACCC...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR TCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCGCTTCAACCCAGATCTaGAGATACCAGGTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIASTQI*RYQVQG
Trigger: TCCCTGAACCTGGTATCTTCAGATCTGGGTTGAAGC...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR GCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCAGTAATGCTGTGTGGTaGTATGGGGACCTCTGCCTA +
Preference number: 2 (lower is better)
Translates to: LLGLIGDPGELFSTQIWISNAVW*YGDLCL
Trigger: TAGGCAGAGGTCCCCATAGCACCACACAGCATTACT...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCTTCCTCAGGAACATCTaGCGACCTCTGCCATCTAAC +
Preference number: 2 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIFLRNI*RPLPSN
Trigger: GTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAA...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR GCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCCATTTCACTTTGGATaGTCATCTTGGGCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIPFHFG*SSWAAV
Trigger: GACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGG...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGCTTAATTCTTTGGTGTaGTCCATCTCACAAAGTATA +
Preference number: 2 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQLNSLV*SISQSI
Trigger: TATACTTTGTGAGATGGACCACACCAAAGAATTAAG...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCAGGGAAGTCAGTGATTaGAAACTGAAGTGGTTACGT +
Preference number: 2 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIREVSD*KLKWLR
Trigger: ACGTAACCACTTCAGTTTCCAATCACTGACTTCCCT...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATCATAGCTTAATTCTTTaGTGTGGTCCATCTCACAAA +
Preference number: 2 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDHSLIL*CGPSHK
Trigger: TTTGTGAGATGGACCACACCAAAGAATTAAGCTATG...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 72 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCTGGCCTTGGGATGGGG +
Preference number: 3 (lower is better)
Translates to: PDAVVRRSSLSV*GTTTPPGLGMG
Trigger: CCCCATCCCAAGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CAA 90 bp CGAGTCTGTGCATCCGTCAGGGTCAGTGGGGACCCCACTCTGGCGGTGGTTTGGGTTGGTCCGTTGGGATaGGAGGTCTGCCGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: RVCASVRVSGDPTLAVVWVGPLG*EVCREV
Trigger: CACCTCCCGGCAGACCTCCAATCCCAACGGACCAAC...CCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR CCA 72 bp GCTCCGCCAGGTATGAGGCAGCCAGGGCTCAGTAGCTaGGCAGTCGACTCCGCAAGCTGGCTCGAGTGTTCT +
Preference number: 3 (lower is better)
Translates to: APPGMRQPGLSS*AVDSASWLECS
Trigger: AGAACACTCGAGCCAGCTTGCGGAGTCGACTGCCCAGCTACTGAGCCCTGGCTGCCTCATACCTGGCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 72 bp GCGTTTGGGGGACGACGACCCCACCTGGCCTTGGGATaGGGAAGCTACTCGAGTCTGTGCATCCGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: AFGGRRPHLALG*GSYSSLCIRQG
Trigger: ACCCTGACGGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTCCCCCAAACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CAA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCACAGTTCCATGGTTaGGGCTGCGGTACACTGGGC +
Preference number: 3 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDPQFHG*GCGTLG
Trigger: GCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGG...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CAA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCCGCCGTCTGCGATCCTaGGAGCTCCACAGTTCCATG +
Preference number: 3 (lower is better)
Translates to: DDDPTWPWDGEATRVCASRRLRS*ELHSSM
Trigger: CATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCG...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR CCA 72 bp GGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGTCTGCCGGGAGGTGAC +
Preference number: 3 (lower is better)
Translates to: GPHSGGGLVLRG*SVGIGGLPGGD
Trigger: GTCACCTCCCGGCAGACCTCCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CAA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 3 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR TCA 72 bp TCTGGCGACCTCTGCCATCTAACAAGGGCTGTCTGCTaGGCTCCGCCAGGTATGAGGCAGCCAGGGCTCAGT +
Preference number: 3 (lower is better)
Translates to: SGDLCHLTRAVC*APPGMRQPGLS
Trigger: ACTGAGCCCTGGCTGCCTCATACCTGGCGGAGCTCAGCAGACAGCCCTTGTTAGATGGCAGAGGTCGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 72 bp CCCGTGCAGCAGGTAATGTGGTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAG +
Preference number: 3 (lower is better)
Translates to: PVQQVMWWRNMH*GSEVGGRSLTE
Trigger: CTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGCTGCACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR CCA 72 bp AGTACGGAGAGGCTGCCCGTGCAGCAGGTAATGTGGTaGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGT +
Preference number: 3 (lower is better)
Translates to: STERLPVQQVMW*RNMHWGSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGCTGCACGGGCAGCCTCTCCGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR CCA 72 bp GGAAGCTACTCGAGTCTGTGCATCCGTCAGGGTCAGTaGGGACCCCACTCTGGCGGTGGTTTGGTATTGAGG +
Preference number: 3 (lower is better)
Translates to: GSYSSLCIRQGQ*GPHSGGGLVLR
Trigger: CCTCAATACCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCGAGTAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CAA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTGGCGGTGGTTTGGTATaGAGGGGTTGGTCCGTTGGG +
Preference number: 3 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSGGGLV*RGWSVG
Trigger: CCCAACGGACCAACCCCTCAATACCAAACCACCGCC...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CAA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATCACTCTGGCGGTGGTTaGGTATTGAGGGGTTGGTCC +
Preference number: 3 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHHSGGG*VLRGWS
Trigger: GGACCAACCCCTCAATACCAAACCACCGCCAGAGTG...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR CCA 72 bp CCTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGGTTTGGGCTGCGGTAC +
Preference number: 3 (lower is better)
Translates to: PEPVRYNAVCDP*SSTVPWFGLRY
Trigger: GTACCGCAGCCCAAACCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR-3UTR CAA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCTCACGTTCTGGCTGTaGTGGAAACTCCCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSLTFWL*WKLPAS
Trigger: GGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR TCA 72 bp CAGGAGCTAGGACTGAAGGGTGGAAACTGCAAGACCTaGGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCA +
Preference number: 3 (lower is better)
Translates to: QELGLKGGNCKT*EGLRLWAWCPS
Trigger: TGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGTTTCCACCCTTCAGTCCTAGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 72 bp ACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGGTTTGGGCTGCGGTAC +
Preference number: 3 (lower is better)
Translates to: TEPVRYNAVCDP*SSTVPWFGLRY
Trigger: GTACCGCAGCCCAAACCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
3UTR-3UTR CAA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 3 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR TCA 72 bp GTGGCTGGGTCCTATCGTATTCAGAGCGAGGGTCTCTaGTTCCTAACAGTGCTGGTGAGGAAGAGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: VAGSYRIQSEGL*FLTVLVRKRCC
Trigger: GCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCGCTCTGAATACGATAGGACCCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR TCA 72 bp ATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTaGCGGAGAGCCAAATCCACTACCCAGAGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: ICTGVQRSGVGH*RRAKSTTQRSS
Trigger: AGAACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR TCA 72 bp TCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTaGAGGTCCCAGATGCTGTGGTACGGCGGTCATCCC +
Preference number: 3 (lower is better)
Translates to: SELLHVMNSPLQ*RSQMLWYGGHP
Trigger: GGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CAA 90 bp CATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 3 (lower is better)
Translates to: HPLINVILLLSELLHVMNVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...GTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CAA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTGCTTACACCAGTATTaGGCACGTCTGTTGATCTCC +
Preference number: 3 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSCLHQY*ARLLIS
Trigger: GGAGATCAACAGACGTGCCAAATACTGGTGTAAGCA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR CAA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGTCAGAAACTCTAGGTTaGCTTACACCAGTATTTGGC +
Preference number: 3 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWSETLG*LTPVFG
Trigger: GCCAAATACTGGTGTAAGCAAACCTAGAGTTTCTGA...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR CCA 72 bp GAGCTCCACAGTTCCATGGTTTGGGCTGCGGTACACTaGGCTGTAATAGGTCCTCCCCTCATATATAGGAGT +
Preference number: 3 (lower is better)
Translates to: ELHSSMVWAAVH*AVIGPPLIYRS
Trigger: ACTCCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR CCA 72 bp TGTCTGTTGTCTGCCTTGCTCACGTTCTGGCTGTTGTaGAAACTCCCTGCTTCCTGGTATCCACTGTCGGAA +
Preference number: 3 (lower is better)
Translates to: CLLSALLTFWLL*KLPASWYPLSE
Trigger: TTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR CCA 72 bp GAATGCTGCTGTCTGTTGTCTGCCTTGCTCACGTTCTaGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCA +
Preference number: 3 (lower is better)
Translates to: ECCCLLSALLTF*LLWKLPASWYP
Trigger: TGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR CAA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTGCCTGGTGTCCCTCATaGCCTCCACAGATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCAWCPS*PPQMEK
Trigger: TTTCTCCATCTGTGGAGGCAATGAGGGACACCAGGC...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CAA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTTTTGGTATTGAGGGGTaGGTCCGTTGGGATTGGAGG +
Preference number: 3 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTFGIEG*VRWDWR
Trigger: CCTCCAATCCCAACGGACCAACCCCTCAATACCAAA...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CAA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGTTTGGTATTGAGGGGTaGGTCCGTTGGGATTGGAGG +
Preference number: 3 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRFGIEG*VRWDWR
Trigger: CCTCCAATCCCAACGGACCAACCCCTCAATACCAAA...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CAA 90 bp GGCATCCCCTTGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTCGGCAGAACGAAGGTCTaGCCCAAGCTGACTATGCTG +
Preference number: 3 (lower is better)
Translates to: GIPLAIVILHRWLGPIVFGRTKV*PKLTML
Trigger: CAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCC...GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR-3UTR CAA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGCTGCTGCTGTCCGAATaGCTCCATGTCATGAACAGT +
Preference number: 3 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRLLLSE*LHVMNS
Trigger: ACTGTTCATGACATGGAGCAATTCGGACAGCAGCAG...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR-3UTR CAA 90 bp AGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTTATTTGGCACGTCTGTaGATCTCCAAGGAAATGACT +
Preference number: 3 (lower is better)
Translates to: RGRGSVTDGEPNPLPREVYLARL*ISKEMT
Trigger: AGTCATTTCCTTGGAGATCAACAGACGTGCCAAATA...AACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR CAA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATGAATGCTGCTGTCTGTaGTCTGCCTTGCTCACGTTC +
Preference number: 3 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDECCCL*SALLTF
Trigger: GAACGTGAGCAAGGCAGACAACAGACAGCAGCATTC...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR CCA 72 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCATAAATGTCATACTGCT +
Preference number: 3 (lower is better)
Translates to: HRNSVSLSGCLA*VEPSSHKCHTA
Trigger: AGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR CCA 72 bp TGTGGCATCCCCTTGGCTATTGTAATACTGCATAGGTaGCTGGGTCCTATCGTATTCAGAGCGAGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: CGIPLAIVILHR*LGPIVFRARVS
Trigger: AGAGACCCTCGCTCTGAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR-3UTR CAA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGCACTCTGGCGGTGGTTaGGTATTGAGGGGTTGGTCC +
Preference number: 3 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQHSGGG*VLRGWS
Trigger: GGACCAACCCCTCAATACCAAACCACCGCCAGAGTG...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
3UTR-3UTR CAA 90 bp CAGTTGAGCTGGTGCTGGCGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTCTGAAACTGAAGCTCTaGCAGACGCACAAGTATCCT +
Preference number: 3 (lower is better)
Translates to: QLSWCWRCLVILLQAYIFLKLKL*QTHKYP
Trigger: AGGATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAG...AAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
3UTR TCA 72 bp CTCTTTGTAGCTACTGCTCAAGGGGGTGGCAACTGTTaGGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: LFVATAQGGGNC*ATSESCFKPAR
Trigger: TCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR TCA 72 bp ATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATaGACAGTCCTTTGCAGTGAAGGTCCCAGATGCTGT +
Preference number: 3 (lower is better)
Translates to: MSYCCCPNCSMS*TVLCSEGPRCC
Trigger: ACAGCATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
3UTR GCA 72 bp TGCCTTGCTCACGTTCTGGCTGTTGTGGAAACTCCCTaGTTCCTGGTATCCACTGTCGGAATAAGAATTCAT +
Preference number: 3 (lower is better)
Translates to: CLAHVLAVVETP*FLVSTVGIRIH
Trigger: ATGAATTCTTATTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR-3UTR CAA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATACTTCTGGGTTTGACTaGCCATGGGCGTTAGTTCCT +
Preference number: 3 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDTSGFD*PWALVP
Trigger: AGGAACTAACGCCCATGGCAAGTCAAACCCAGAAGT...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CAA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACAAAACGCAGTTTTCTCTaGGGTGTCTTTCCATATACT +
Preference number: 3 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTKRSFL*GVFPYT
Trigger: AGTATATGGAAAGACACCCAAGAGAAAACTGCGTTT...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR TCA 72 bp AAGATACCAGGTTCAGGGAAGTCAGTGATTGGAAACTaGAGTGGTTACGTCCCAGAAGTCCTGATGCCAGTT +
Preference number: 3 (lower is better)
Translates to: KIPGSGKSVIGN*SGYVPEVLMPV
Trigger: AACTGGCATCAGGACTTCTGGGACGTAACCACTTCAGTTTCCAATCACTGACTTCCCTGAACCTGGTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR GCA 72 bp ACCACATGGTTGTTAGTTGATCCTATGAATGAATGCTaGTGTCTGTTGTCTGCCTTGCTCACGTTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: TTWLLVDPMNEC*CLLSALLTFWL
Trigger: CAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGGATCAACTAACAACCATGTGGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR GCA 72 bp CTCACCACATGGTTGTTAGTTGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCCTTGCTCACGTTCTGG +
Preference number: 3 (lower is better)
Translates to: LTTWLLVDPMNE*CCLLSALLTFW
Trigger: CCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGGATCAACTAACAACCATGTGGTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR CCA 72 bp AACTTTCATGCTCGCACTGGTATTTCCATTTCACTTTaGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAG +
Preference number: 3 (lower is better)
Translates to: NFHARTGISISL*MLILGCCPFGK
Trigger: CTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGCATGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 72 bp CTAAGCTTGTCTCTTTGTAGCTACTGCTCAAGGGGGTaGCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAA +
Preference number: 3 (lower is better)
Translates to: LSLSLCSYCSRG*QLLSYFRKLLQ
Trigger: TTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR GCA 72 bp TTCATGCTCGCACTGGTATTTCCATTTCACTTTGGATaGTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: FMLALVFPFHFG*SSWAAVHSARK
Trigger: TTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR GCA 72 bp GAAGGCAAATTTCTAAGCTTGTCTCTTTGTAGCTACTaGTCAAGGGGGTGGCAACTGTTGAGCTACTTCAGA +
Preference number: 3 (lower is better)
Translates to: EGKFLSLSLCSY*SRGWQLLSYFR
Trigger: TCTGAAGTAGCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAGAAATTTGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR CCA 72 bp GCACTGGTATTTCCATTTCACTTTGGATGCTCATCTTaGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTT +
Preference number: 3 (lower is better)
Translates to: ALVFPFHFGCSS*AAVHSARKRSF
Trigger: AAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CCA 72 bp ATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTaGGCTGGCTCCGATTCCCTTGTTTTCCTGATTCCC +
Preference number: 3 (lower is better)
Translates to: MQSLKESYCQLA*AGSDSLVFLIP
Trigger: GGGAATCAGGAAAACAAGGGAATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CAA 90 bp CATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACTTTGTCCTTCAGCTCTaGAATTCCTCACCACATGGT +
Preference number: 3 (lower is better)
Translates to: HPLINVILLLSELLHVMNFVLQL*NSSPHG
Trigger: ACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAAA...GTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
3UTR GCA 72 bp GGTATTTCCATTTCACTTTGGATGCTCATCTTGGGCTaGTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: GISISLWMLILG*CPFGKKTQFSL
Trigger: AAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR TCA 72 bp CTTTCTGGCTCTGTTAGGTCTGATTGGAGACCCAGGTaGGTTATTTTCAACCCAAATTTGGATCCGTTTTTG +
Preference number: 3 (lower is better)
Translates to: LSGSVRSDWRPR*VIFNPNLDPFL
Trigger: CAAAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAGAGCCAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR-3UTR CAA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCGTTTTAATCTGCGATTaGTATTACACTTGCAGGGTA +
Preference number: 3 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIVLICD*YYTCRV
Trigger: TACCCTGCAAGTGTAATACAAATCGCAGATTAAAAC...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR TCA 72 bp TTAATCTGCGATTTGTATTACACTTGCAGGGTATATTaGGCTAAGACAACACTTCTGGGTTTGACTTGCCAT +
Preference number: 3 (lower is better)
Translates to: LICDLYYTCRVY*AKTTLLGLTCH
Trigger: ATGGCAAGTCAAACCCAGAAGTGTTGTCTTAGCTCAATATACCCTGCAAGTGTAATACAAATCGCAGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCCGGCGGCGGCGGTaGCCAACTTGCCCCTCTACC +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDPRRRR*PTCPST
Trigger: GGTAGAGGGGCAAGTTGGCCACCGCCGCCGCCGGGG...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp CGAGTCTGTGCATCCGTCAGGGTCAGTGGGGACCCCACTCTGGCGGTGGTTTGGGTGTCGAGGGCGACTTaGGGCGCGCGGCGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RVCASVRVSGDPTLAVVWVSRAT*GARRQA
Trigger: TGCCTGCCGCCGCGCGCCCCAAGTCGCCCTCGACAC...CCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp TGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCCTGGAGGCGGGTCTCTGTaGGTACGGAGAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: CGTAVIPERLGDDDPTWPGGGSL*VRRGCP
Trigger: CGGGCAGCCTCTCCGTACTCACAGAGACCCGCCTCC...AGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACGCCGGGGAGCCGGTTaGCCAGGTCTCGCATGGCGT +
Preference number: 4 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPRRGAG*PGLAWR
Trigger: ACGCCATGCGAGACCTGGTCAACCGGCTCCCCGGCG...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR GCA 90 bp TGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCGTGGGCAGAGGTCGTaGGCTGCGCGTACGGGAGAC +
Preference number: 4 (lower is better)
Translates to: CCGTAVIPERLGDDDPTWRGQRS*AARTGD
Trigger: GTCTCCCGTACGCGCAGCGCACGACCTCTGCCCACG...CCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR GCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACACACCTGACTACCGCTaGGCCCCGAGCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDTPDYR*APSGHG
Trigger: GCCGTGGCCGCTCGGGGCGCAGCGGTAGTCAGGTGT...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR CCA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCCCGCGGCGGGCTGTGTaGACTCTGCCCCTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPPRRAV*TLPLVH
Trigger: ATGCACCAGGGGCAGAGTCCACACAGCCCGCCGCGG...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCCTGCCGGGAGGTGACTaGCCCAATCCGCCGTATAGC +
Preference number: 4 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPLPGGD*PNPPYS
Trigger: GCTATACGGCGGATTGGGTCAGTCACCTCCCGGCAG...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCTGGTCTCGGGTTCCATaGCTGGGCCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPWSRVP*LGQWRQ
Trigger: CTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCA...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp TGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCCTATCCGTCAGGGTCAGTaGGGACCCCACTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: CGTAVIPERLGDDDPTWPIRQGQ*GPHSGG
Trigger: ACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGAT...AGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACTGCTCCGGTGACCTCTaGCTGCGCGGCGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDCSGDL*LRGESW
Trigger: CCAGCTCTCGCCGCGCAGCCAGAGGTCACCGGAGCA...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCTCGGGGGTCGGTCACTaGCGGAGAGCCAAATCCACT +
Preference number: 4 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPSGVGH*RRAKST
Trigger: AGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGA...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACAGGTCTGCCGGGAGGTaGCTGACCCAATCCGCCGTA +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDRSAGR*LTQSAV
Trigger: TACGGCGGATTGGGTCAGTCACCTCCCGGCAGACCT...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACTTCCCCCGCGGAGCTaGGGTTCCTTAGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPLPPRS*GSLGNL
Trigger: CAGGTTGCCTAAGGAACCTCAGCTCCGCGGGGGAAG...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp AGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACCCGAAGATGCTCCGGTaGCCTCTGGCTGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SEGPRCCGTAVIPERLGDPKMLR*PLAARR
Trigger: TCGCCGCGCAGCCAGAGGTCACCGGAGCATCTTCGG...GTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR CCA 90 bp TGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCCTGACCCCACCTGGCCTTaGGATGGGGAAGCTACTCGA +
Preference number: 4 (lower is better)
Translates to: CGTAVIPERLGDDDPTWPDPTWP*DGEATR
Trigger: TCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC...AGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCAAGGGCGGGCGCCCAGTaGTGTCGAGGGCGACTTGGG +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPRAGAQ*CRGRLG
Trigger: CCCAAGTCGCCCTCGACACCACTGGGCGCCCGCCCT...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACTACGGCGGTCATCCCTaGGCGTTTGGGGGACGACGA +
Preference number: 4 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDYGGHP*AFGGRR
Trigger: TCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTA...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCTACGGCGGTCATCCCTaGGCGTTTGGGGGACGACGA +
Preference number: 4 (lower is better)
Translates to: DDDPTWPWDGEATRVCASYGGHP*AFGGRR
Trigger: TCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTA...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGCGGGGCTGGGAGCTCTaGATCCGAACAGCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWRGWEL*IRTAQR
Trigger: ACGCTGGGCTGTTCGGATTCAGAGCTCCCAGCCCCG...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR GCA 90 bp CGAGTCTGTGCATCCGTCAGGGTCAGTGGGGACCCCACTCTGGCGGTGGTTTGGTGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAG +
Preference number: 4 (lower is better)
Translates to: RVCASVRVSGDPTLAVVWWRVCG*PSSTNE
Trigger: CTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCA...CCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCCACCTGGCCTTGGGATaGGGAAGCTACTCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPHLALG*GSYSSL
Trigger: CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTG...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp TGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: CCGTAVIPERLGDDDPTWAVCDP*SSTVPW
Trigger: CCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGC...CCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACTCTCAGAGACCCCCTTaGAGGAGACACGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDSQRPP*RRHACA
Trigger: AGCACAGGCGTGTCTCCTTCAAGGGGGTCTCTGAGA...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGGAGGCGGGTCTCTGTaGGTACGGAGAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTGGGSL*VRRGCP
Trigger: CGGGCAGCCTCTCCGTACTCACAGAGACCCGCCTCC...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp TGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCCTCGATACAACGCCGTCTaGGATCCTTGGAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: CGTAVIPERLGDDDPTWPRYNAV*DPWSST
Trigger: TGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCG...AGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTGCCCCTCTACCCCTTaGCCATGGTGCCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSCPSTP*PWCRLR
Trigger: GCGGAGGCGGCACCATGGGCAAGGGGTAGAGGGGCA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR GCA 90 bp AGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGATCCGCCAGGGAGGTaGCGCAGCTCCGCTTCAACT +
Preference number: 4 (lower is better)
Translates to: SEGPRCCGTAVIPERLGDDPPGR*RSSAST
Trigger: AGTTGAAGCGGAGCTGCGGCACCTCCCTGGCGGATC...GTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR CCA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGCCATGCCTGGGCCAGTaGAGGCAGCTTCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLPCLGQ*RQLPGG
Trigger: CCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGG...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp TGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: CCGTAVIPERLGDDDPTWWRNMH*GSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCA...CCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CGAGTCTGTGCATCCGTCAGGGTCAGTGGGGACCCCACTCTGGCGGTGGTTTGGGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: RVCASVRVSGDPTLAVVWAVCDP*SSTVPW
Trigger: CCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGC...CCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCCGAACAGCCCAGCGTaGGCAGAGGTCGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSPNSPA*AEVVRC
Trigger: GCAGCGCACGACCTCTGCCCACGCTGGGCTGTTCGG...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGCGGTGGTTTGGTATTaGGGGGTTGGTCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDAVVWY*GVGPLG
Trigger: TCCCAACGGACCAACCCCTCAATACCAAACCACCGC...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGGCGGTGGTTTGGTATTaGGGGGTTGGTCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTAVVWY*GVGPLG
Trigger: TCCCAACGGACCAACCCCTCAATACCAAACCACCGC...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTTCCCCCGCGGAGCTaGGGTTCCTTAGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPLPPRS*GSLGNL
Trigger: CAGGTTGCCTAAGGAACCTCAGCTCCGCGGGGGAAG...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACGATACAACGCCGTCTaGGATCCTTGGAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPRYNAV*DPWSST
Trigger: TGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCG...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTCGGCGGTGGCCAACTTaGCCCTCTACCCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTRRWPT*PSTPCP
Trigger: TGGGCAAGGGGTAGAGGGGCAAGTTGGCCACCGCCG...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLVEAAS*RVCGCP
Trigger: GGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCAC...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp TGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCAGTTGAGCTGGTGCTaGCGATGCTTGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: CCGTAVIPERLGDDDPTWQLSWC*RCLVIL
Trigger: CAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG...CCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR CCA 90 bp GACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTCAGGGTGGGGACCCCACTCTaGCGGTGGTTTGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: DPTWPWDGEATRVCASVRVGTPL*RWFGIE
Trigger: CTCAATACCAAACCACCGCCAGAGTGGGGTCCCCAC...CCTGACGGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACCCCACCTGGCCTTaGGATGGGGAAGCTACTCGA +
Preference number: 4 (lower is better)
Translates to: SEGPRCCGTAVIPERLGDDPTWP*DGEATR
Trigger: TCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC...GTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACTCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDSGCLA*VEPSSH
Trigger: ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGA...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCTGGGCTGCGGTACACTaGGCTGTAATAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DDDPTWPWDGEATRVCASWAAVH*AVIGPP
Trigger: GGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCA...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACTTCCAGTTCTCGGGTaGGTCGCTGAAACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPLPVLG*VAETEA
Trigger: AGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAG...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR TCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGGCCCGATTGGCTACTaGTGGCTGAACCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: DDDPTWPWDGEATRVCASGPIGY*WLNQCL
Trigger: CAAACACTGGTTCAGCCATCAGTAGCCAATCGGGCC...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR TCA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGCTGCCGGGAGGTGACTaGCCCAATCCGCCGTATAGC +
Preference number: 4 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLLPGGD*PNPPYS
Trigger: GCTATACGGCGGATTGGGTCAGTCACCTCCCGGCAG...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCAGGTCTGCCGGGAGGTaGCTGACCCAATCCGCCGTA +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLRSAGR*LTQSAV
Trigger: TACGGCGGATTGGGTCAGTCACCTCCCGGCAGACCT...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGAGGTCTGCCGGGAGGTaGCTGACCCAATCCGCCGTA +
Preference number: 4 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLRSAGR*LTQSAV
Trigger: TACGGCGGATTGGGTCAGTCACCTCCCGGCAGACCT...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GACCCAATCCGCCGTATAGCTGTTGGGGAGGCGGGTCTCTGTGAGTACGGAGAGGCGGTGGTTTGGTATTaGGGGGTTGGTCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: DPIRRIAVGEAGLCEYGEAVVWY*GVGPLG
Trigger: TCCCAACGGACCAACCCCTCAATACCAAACCACCGC...CTCTCCGTACTCACAGAGACCCGCCTCCCCAACAGCTATACGGCGGATTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGCTTCCCCCGCGGAGCTaGGGTTCCTTAGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLLPPRS*GSLGNL
Trigger: CAGGTTGCCTAAGGAACCTCAGCTCCGCGGGGGAAG...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCTGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAG +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVWRVCG*PSSTNE
Trigger: CTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCA...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCTGGTCTCGGGTTCCATaGCTGGGCCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLWSRVP*LGQWRQ
Trigger: CTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCA...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCATGGTCTCGGGTTCCATaGCTGGGCCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSWSRVP*LGQWRQ
Trigger: CTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCA...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp TGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGTCTCAGTTGAGCTGGTaGTGGCGATGCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: CCGTAVIPERLGDDDPTWSQLSW*WRCLVI
Trigger: AATCACCAAGCATCGCCAGCACCAGCTCAACTGAGA...CCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR GCA 90 bp TGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGGTCTGTTGTCTGCCTTaGTCACGTTCTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CCGTAVIPERLGDDDPTWVCCLP*SRSGCC
Trigger: ACAACAGCCAGAACGTGAGCAAGGCAGACAACAGAC...CCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCTGCTGTCTGTTGTCTaGCTTGCTCACGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDLLSVV*LAHVLA
Trigger: AGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAG...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGTTGGGATTGGAGGTCTaGCGGGAGGTGACTGACCCA +
Preference number: 4 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWLGLEV*REVTDP
Trigger: TGGGTCAGTCACCTCCCGGCAGACCTCCAATCCCAA...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGAGTGAAGGTCCCAGATaGTGTGGTACGGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTSEGPR*CGTAVI
Trigger: GATGACCGCCGTACCACAGCATCTGGGACCTTCACT...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCATACCTACTGAACCTGTaGGATACAACGCCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPYLLNL*DTTPSA
Trigger: CGCAGACGGCGTTGTATCGCACAGGTTCAGTAGGTA...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR GCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAACCCCTTGCCCATGGTaGCGCCTCCGCGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPTPCPW*RLRGRR
Trigger: ACGCCGGCCGCGGAGGCGGCACCATGGGCAAGGGGT...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR GCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCACCGCGGCACCTCCACTaGCCGCGCTCGCGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPPRHLH*PRSRCV
Trigger: GACACACCGCGAGCGCGGGCAGTGGAGGTGCCGCGG...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR CCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCATTCCTGGCGGGTCTGTaGTTGCCCCTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPFLAGL*LPLLHQ
Trigger: TTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAA...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATCTCGGGTTCCATGCCTaGGCCAGTGGAGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHLGFHA*ASGGSF
Trigger: GAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAG...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATGAGGGGTTGGTCCGTTaGGATTGGAGGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHEGLVR*DWRSAG
Trigger: CCCGGCAGACCTCCAATCCCAACGGACCAACCCCTC...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGCACCTGGCCTTGGGATaGGGAAGCTACTCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWHLALG*GSYSSL
Trigger: CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTG...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACCACAGTTCCATGGTTTaGGCTGCGGTACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDHSSMV*AAVHWA
Trigger: AGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTG...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCAAGCTCCACAGTTCCATaGTTTGGGCTGCGGTACACT +
Preference number: 4 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPSSTVP*FGLRYT
Trigger: AGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCT...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGTCTACCCCTTGCCCATaGTGCCGCCTCCGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLSTPCP*CRLRGR
Trigger: CCGGCCGCGGAGGCGGCACCATGGGCAAGGGGTAGA...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR TCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTCGGGGGTCGGTCACTaGCGGAGAGCCAAATCCACT +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSSGVGH*RRAKST
Trigger: AGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGGAGGCGGGTCTCTGTaGGTACGGAGAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPGGGSL*VRRGCP
Trigger: CGGGCAGCCTCTCCGTACTCACAGAGACCCGCCTCC...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTCTGCCGGGAGGTGACTaGCCCAATCCGCCGTATAGC +
Preference number: 4 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVLPGGD*PNPPYS
Trigger: GCTATACGGCGGATTGGGTCAGTCACCTCCCGGCAG...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR TCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCAACAGTCCTTTGCAGTaGAGGTCCCAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DDDPTWPWDGEATRVCASNSPLQ*RSQMLW
Trigger: CCACAGCATCTGGGACCTTCACTGCAAAGGACTGTT...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGATCACATACAACAGTaGGTCTACCAGCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDDHIQQ*VYQPLA
Trigger: TGCGAGGGGCTGGTAGACTCACTGTTGTATGTGATC...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp AGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACTCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: SEGPRCCGTAVIPERLGDSTNEA*SGAGIP
Trigger: AGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGA...GTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAG +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSWRVCG*PSSTNE
Trigger: CTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACTTCCATGGTTTGGGCTaGGGTACACTGGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDFHGLG*GTLGCN
Trigger: ATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAA...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATGCAGAGGTCGTGCGCTaGGCGTACGGGAGACCGGGG +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDAEVVR*AYGRPG
Trigger: CCCCGGTCTCCCGTACGCGCAGCGCACGACCTCTGC...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR GCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCGGACTCTGCCCCTGGTaGATTCCTCGCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVGLCPW*IPRIPA
Trigger: TGCAGGAATGCGAGGAATGCACCAGGGGCAGAGTCC...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR GCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCACCGGTGACCTCTGGCTaGGCGGCGAGAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPPVTSG*AARAGE
Trigger: CTCCCCAGCTCTCGCCGCGCAGCCAGAGGTCACCGG...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR CCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCTTCCTGGCGGGTCTGTaGTTGCCCCTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLFLAGL*LPLLHQ
Trigger: TTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAA...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTTTCCTGGCGGGTCTGTaGTTGCCCCTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTFLAGL*LPLLHQ
Trigger: TTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAA...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCACCATGCCTGGGCCAGTaGAGGCAGCTTCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPPCLGQ*RQLPGG
Trigger: CCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGG...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTCGGAATCCATGCCTGGGCCAGTaGAGGCAGCTTCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SRSGCCGNSLLPGIHCRNPCLGQ*RQLPGG
Trigger: CCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGG...ATTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CCA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCCAGTTGAGCTGGTGCTaGCGATGCTTGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: DDDPTWPWDGEATRVCASQLSWC*RCLVIL
Trigger: CAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR CCA 90 bp GACCCAATCCGCCGTATAGCTGTTGGGGAGGCGGGTCTCTGTGAGTACGGAGAGTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: DPIRRIAVGEAGLCEYGEWRNMH*GSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCA...CTCTCCGTACTCACAGAGACCCGCCTCCCCAACAGCTATACGGCGGATTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGTCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWSGCLA*VEPSSH
Trigger: ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGA...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCAGCCTGTCAGGCTGTCTaGCCTGGGTGGAACCATCCT +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSACQAV*PGWNHP
Trigger: AGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGC...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GACCCAATCCGCCGTATAGCTGTTGGGGAGGCGGGTCTCTGTGAGTACGGAGAGCACAGTTCCATGGTTTaGGCTGCGGTACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: DPIRRIAVGEAGLCEYGEHSSMV*AAVHWA
Trigger: AGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTG...CTCTCCGTACTCACAGAGACCCGCCTCCCCAACAGCTATACGGCGGATTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTCAGGAGCTCCACAGTTCCATaGTTTGGGCTGCGGTACACT +
Preference number: 4 (lower is better)
Translates to: DPTWPWDGEATRVCASVRSSTVP*FGLRYT
Trigger: AGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCT...CCTGACGGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGGGGAGCCGGGAGGGGTaGAGCGTGAGGATCCGCGGC +
Preference number: 4 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLGSREG*SVRIRG
Trigger: GCCGCGGATCCTCACGCTCCACCCCTCCCGGCTCCC...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCTTGTCCTTCAGCTCTTaGATTCCTCACCACATGGTT +
Preference number: 4 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPLSFSS*IPHHMV
Trigger: AACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAA...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTGGAGGCGGGTCTCTGTaGGTACGGAGAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCGGGSL*VRRGCP
Trigger: CGGGCAGCCTCTCCGTACTCACAGAGACCCGCCTCC...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp GGTTCCTTGTTCTGGCTCTGTCCTGATGAGATAGTTGTTGGGCTGGACAGCGTCAGGTCTGCCGGGAGGTaGCTGACCCAATCCGCCGTA +
Preference number: 4 (lower is better)
Translates to: GSLFWLCPDEIVVGLDSVRSAGR*LTQSAV
Trigger: TACGGCGGATTGGGTCAGTCACCTCCCGGCAGACCT...GACGCTGTCCAGCCCAACAACTATCTCATCAGGACAGAGCCAGAACAAGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR TCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGGGAGGGGTGGAGCGTaGGGATCCGCGGCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKGRGGA*GSAAGR
Trigger: TCTACCGGCCGCGGATCCTCACGCTCCACCCCTCCC...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp ATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCCTGTACACACACACCTaGCTACCGCTGCGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: IGVMCKSGDTAERRSCPSLYTHT*LPLRPE
Trigger: CTCGGGGCGCAGCGGTAGTCAGGTGTGTGTGTACAG...GCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR GCA 90 bp CACTTCCAGTTCTCGGGTGAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTGGTCTCGGGTTCCATaGCTGGGCCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HFQFSGESLKLKLLQTHKWSRVP*LGQWRQ
Trigger: CTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCA...CTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR GCA 90 bp TGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCCTATGAATGAATGCTaGTGTCTGTTGTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CCGTAVIPERLGDDDPTWPMNEC*CLLSAL
Trigger: CAAGGCAGACAACAGACAGCAGCATTCATTCATAGG...CCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATTTGGGATTGGAGGTCTaGCGGGAGGTGACTGACCCA +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHLGLEV*REVTDP
Trigger: TGGGTCAGTCACCTCCCGGCAGACCTCCAATCCCAA...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp TGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCCTTATATAGGAGTAATGTaGAAGTCGGGAGACACGGCA +
Preference number: 4 (lower is better)
Translates to: CGTAVIPERLGDDDPTWPYIGVM*KSGDTA
Trigger: TGCCGTGTCTCCCGACTTGCACATTACTCCTATATA...AGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGTTCCATGGTTTGGGCTaGGGTACACTGGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTFHGLG*GTLGCN
Trigger: ATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAA...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRVEAAS*RVCGCP
Trigger: GGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCAC...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp TTCCAGTTCTCGGGTGAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTATCCATGCCTGGGCCAGTaGAGGCAGCTTCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FQFSGESLKLKLLQTHKYPCLGQ*RQLPGG
Trigger: CCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGG...ATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGCAGTTGAGCTGGTGCTaGCGATGCTTGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWQLSWC*RCLVIL
Trigger: CAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR CCA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGACTTCTCAGTTGAGCTaGTGCTGGCGATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWTSQLS*CWRCLV
Trigger: CACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGT...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR CCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATGTGGGGACCCCACTCTaGCGGTGGTTTGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHVGTPL*RWFGIE
Trigger: CTCAATACCAAACCACCGCCAGAGTGGGGTCCCCAC...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 4 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCTCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVSGCLA*VEPSSH
Trigger: ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGA...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGGCCTGTCAGGCTGTCTaGCCTGGGTGGAACCATCCT +
Preference number: 4 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLACQAV*PGWNHP
Trigger: AGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGC...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSAVCDP*SSTVPW
Trigger: CCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGC...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACACAGGCCTTTATGTGTaGCATCCCCTTGGCTATTGT +
Preference number: 4 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDTGLYV*HPLGYC
Trigger: ACAATAGCCAAGGGGATGCCACACATAAAGGCCTGT...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGCTGCGCGGCGAGAGCTaGGGAGGGAAGGCGCTAGGG +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKLRGES*GGKALG
Trigger: CCCTAGCGCCTTCCCTCCCCAGCTCTCGCCGCGCAG...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCAGCTGGCGATGCTTGGTaGTTCTGCTCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSAGDAW*FCSKPT
Trigger: TGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGC...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR TCA 90 bp GGTTCCTTGTTCTGGCTCTGTCCTGATGAGATAGTTGTTGGGCTGGACAGCGTCTCGGGGGTCGGTCACTaGCGGAGAGCCAAATCCACT +
Preference number: 4 (lower is better)
Translates to: GSLFWLCPDEIVVGLDSVSGVGH*RRAKST
Trigger: AGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGA...GACGCTGTCCAGCCCAACAACTATCTCATCAGGACAGAGCCAGAACAAGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR TCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTGCGGTGGTTTGGTATTaGGGGGTTGGTCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVAVVWY*GVGPLG
Trigger: TCCCAACGGACCAACCCCTCAATACCAAACCACCGC...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR TCA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTTACGGCGGTCATCCCTaGGCGTTTGGGGGACGACGA +
Preference number: 4 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTYGGHP*AFGGRR
Trigger: TCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTA...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCTCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLSTNEA*SGAGIP
Trigger: AGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGA...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCATCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSSTNEA*SGAGIP
Trigger: AGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGA...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp AAGTATCCTGCATGTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACATGCCATGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAG +
Preference number: 4 (lower is better)
Translates to: KYPACSDSDWHLERLYMPWRVCG*PSSTNE
Trigger: CTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCA...TGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR GCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCAAGCTGGTGCTGGCGATaGTTGGTGATTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPSWCWR*LVILLQ
Trigger: TTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCT...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR GCA 90 bp AGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGTTGTGGAAACTCCCTaGTTCCTGGTATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: SEGPRCCGTAVIPERLGDVVETP*FLVSTV
Trigger: GACAGTGGATACCAGGAAGCAGGGAGTTTCCACAAC...GTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTGCTGTCTGTTGTCTaGCTTGCTCACGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPLLSVV*LAHVLA
Trigger: AGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAG...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTTTGGGATTGGAGGTCTaGCGGGAGGTGACTGACCCA +
Preference number: 4 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVLGLEV*REVTDP
Trigger: TGGGTCAGTCACCTCCCGGCAGACCTCCAATCCCAA...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR GCA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGAGCTACTCGAGTCTGTaGATCCGTCAGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLSYSSL*IRQGQW
Trigger: CCACTGACCCTGACGGATGCACAGACTCGAGTAGCT...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CGAGGGTCTCTGATTCCTAACAGTGCTGGTGAGGAAGAGGTGCTGCCGACTGACAGTGAAGGTCCCAGATaGTGTGGTACGGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: RGSLIPNSAGEEEVLPTDSEGPR*CGTAVI
Trigger: GATGACCGCCGTACCACAGCATCTGGGACCTTCACT...GTCAGTCGGCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR GCA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCATATATAGGAGTAATGTaGAAGTCGGGAGACACGGCA +
Preference number: 4 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPYIGVM*KSGDTA
Trigger: TGCCGTGTCTCCCGACTTGCACATTACTCCTATATA...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CGAGTCTGTGCATCCGTCAGGGTCAGTGGGGACCCCACTCTGGCGGTGGTTTGGTATATAGGAGTAATGTaGAAGTCGGGAGACACGGCA +
Preference number: 4 (lower is better)
Translates to: RVCASVRVSGDPTLAVVWYIGVM*KSGDTA
Trigger: TGCCGTGTCTCCCGACTTGCACATTACTCCTATATA...CCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCTACCTACTGAACCTGTaGGATACAACGCCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVYLLNL*DTTPSA
Trigger: CGCAGACGGCGTTGTATCGCACAGGTTCAGTAGGTA...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR GCA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGCATTCCTCGCATTCCTaGACAATCTGTCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLHSSHS*TICRQP
Trigger: GGGCTGGCGACAGATTGTGCAGGAATGCGAGGAATG...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR GCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGGGCTGTGTGGACTCTaGCCCTGGTGCATTCCTCGC +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPGLCGL*PWCIPR
Trigger: GCGAGGAATGCACCAGGGGCAGAGTCCACACAGCCC...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDVEAAS*RVCGCP
Trigger: GGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCAC...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGCCATGCCTGGGCCAGTaGAGGCAGCTTCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKPCLGQ*RQLPGG
Trigger: CCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGG...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCACTCGGGTTCCATGCCTaGGCCAGTGGAGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPLGFHA*ASGGSF
Trigger: GAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAG...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTCGGGTTCCATGCCTaGGCCAGTGGAGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLLGFHA*ASGGSF
Trigger: GAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAG...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACAGAGGGGTTGGTCCGTTaGGATTGGAGGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTEGLVR*DWRSAG
Trigger: CCCGGCAGACCTCCAATCCCAACGGACCAACCCCTC...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGAGGGGTTGGTCCGTTaGGATTGGAGGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKEGLVR*DWRSAG
Trigger: CCCGGCAGACCTCCAATCCCAACGGACCAACCCCTC...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATACCCCACTCTGGCGGTaGTTTGGTATTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHTPLWR*FGIEGL
Trigger: CAACCCCTCAATACCAAACCACCGCCAGAGTGGGGT...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGATCCGTCAGGGTCAGTaGGGACCCCACTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRIRQGQ*GPHSGG
Trigger: ACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGAT...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGATCCGTCAGGGTCAGTaGGGACCCCACTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKIRQGQ*GPHSGG
Trigger: ACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGAT...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTCAGGTACTGCATAGGTGGCTaGGTCCTATCGTATTCAGAG +
Preference number: 4 (lower is better)
Translates to: DPTWPWDGEATRVCASVRYCIGG*VLSYSE
Trigger: CTCTGAATACGATAGGACCCAGCCACCTATGCAGTA...CCTGACGGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR CAA 72 bp GGGTGGAAACTGCAAGACCTGAGAAGGCCTCAGACTTaGGGCCTGGTGTCCCTCATTGCCTCCACAGATGGA +
Preference number: 4 (lower is better)
Translates to: GWKLQDLRRPQT*GLVSLIASTDG
Trigger: TCCATCTGTGGAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGTTTCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATCTTCCAGTTCTCGGGTaGGTCGCTGAAACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHLPVLG*VAETEA
Trigger: AGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAG...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR TCA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGGCTGGCGATGCTTGGTaGTTCTGCTCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLAGDAW*FCSKPT
Trigger: TGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGC...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR TCA 90 bp GACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTCAGGAGATGTCTGTTCTGGTaGATAGAGGGTTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DPTWPWDGEATRVCASVRRCLFW*IEGSLF
Trigger: GAACAAGGAACCCTCTATTCACCAGAACAGACATCT...CCTGACGGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTTACGGCGGTCATCCCTaGGCGTTTGGGGGACGACGA +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCYGGHP*AFGGRR
Trigger: TCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTA...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCAAACAGTCCTTTGCAGTaGAGGTCCCAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSNSPLQ*RSQMLW
Trigger: CCACAGCATCTGGGACCTTCACTGCAAAGGACTGTT...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAACAGTCCTTTGCAGTaGAGGTCCCAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHNSPLQ*RSQMLW
Trigger: CCACAGCATCTGGGACCTTCACTGCAAAGGACTGTT...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTAACAGTCCTTTGCAGTaGAGGTCCCAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSNSPLQ*RSQMLW
Trigger: CCACAGCATCTGGGACCTTCACTGCAAAGGACTGTT...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTCACCACTTTCAGAGATaGTCTGTCGCCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTHHFQR*SVAPAF
Trigger: AAAGGCAGGGGCGACAGATCATCTCTGAAAGTGGTG...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR TCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTGTGCTGCCGACTGACTaGATGATGGGTGACATCTGT +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSVLPTD*MMGDIC
Trigger: ACAGATGTCACCCATCATTCAGTCAGTCGGCAGCAC...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR GCA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTAGCTGGTGCTGGCGATaGTTGGTGATTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTSWCWR*LVILLQ
Trigger: TTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCT...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR GCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTAGCTGGTGCTGGCGATaGTTGGTGATTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSSWCWR*LVILLQ
Trigger: TTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCT...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR GCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCGTCTGTTGTCTGCCTTaGTCACGTTCTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVVCCLP*SRSGCC
Trigger: ACAACAGCCAGAACGTGAGCAAGGCAGACAACAGAC...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTDPMNE*CCLLSA
Trigger: GGCAGACAACAGACAGCAGCATTCATTCATAGGATC...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCATGTGGTGGAGGAATATaGACTGGGGTTCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSCGGGI*TGVQRS
Trigger: CGACCTCTGAACCCCAGTGCATATTCCTCCACCACA...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTAGTGAAGGTCCCAGATaGTGTGGTACGGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVSEGPR*CGTAVI
Trigger: GATGACCGCCGTACCACAGCATCTGGGACCTTCACT...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR GCA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACAGAAGGTCAACCAGATaGTTGATTCCCCCTAACCTA +
Preference number: 4 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDRRSTR*LIPPNL
Trigger: TAGGTTAGGGGGAATCAAGCATCTGGTTGACCTTCT...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCACTCCAGCTCCGAAGATaGTCCGGTGACCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPLQLRR*SGDLWL
Trigger: CAGCCAGAGGTCACCGGAGCATCTTCGGAGCTGGAG...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR CCA 90 bp TTGAGCTGGTGCTGGCGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTCTACTCGGGTTCCATGCCTaGGCCAGTGGAGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSWCWRCLVILLQAYIFLLGFHA*ASGGSF
Trigger: GAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAG...TAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTACTTCTCAGTTGAGCTaGTGCTGGCGATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSTSQLS*CWRCLV
Trigger: CACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGT...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR CCA 90 bp GTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTCTCAGCCTTGCTCACGTTCTaGCTGTTGTGGAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: VGGRSLTESQIHYPEKFSALLTF*LLWKLP
Trigger: AGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGC...TGAGAACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCGTGCAGCAGGTAATGTaGTGGAGGAATATGCACTGG +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVVQQVM*WRNMHW
Trigger: CCAGTGCATATTCCTCCACCACATTACCTGCTGCAC...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CTCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTCGGAAGTGGGGACCCCACTCTaGCGGTGGTTTGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: LTFWLLWKLPASWYPLSEVGTPL*RWFGIE
Trigger: CTCAATACCAAACCACCGCCAGAGTGGGGTCCCCAC...TTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAATCCGTCAGGGTCAGTaGGGACCCCACTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPIRQGQ*GPHSGG
Trigger: ACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGAT...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTGACCCCACCTGGCCTTaGGATGGGGAAGCTACTCGA +
Preference number: 4 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTDPTWP*DGEATR
Trigger: TCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACATCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGCCTGTCAGGCTGTCTaGCCTGGGTGGAACCATCCT +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPACQAV*PGWNHP
Trigger: AGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGC...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGCACAGTTCCATGGTTTaGGCTGCGGTACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLHSSMV*AAVHWA
Trigger: AGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTG...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAGCTCCACAGTTCCATaGTTTGGGCTGCGGTACACT +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHSSTVP*FGLRYT
Trigger: AGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCT...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTCAGGGTAATACTGCATAGGTaGCTGGGTCCTATCGTATTC +
Preference number: 4 (lower is better)
Translates to: DPTWPWDGEATRVCASVRVILHR*LGPIVF
Trigger: GAATACGATAGGACCCAGCCACCTATGCAGTATTAC...CCTGACGGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp ACGCACAAGTATCCTGCATGTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACATTCTGACTGGCACCTaGAGCGGCTCTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: THKYPACSDSDWHLERLYILTGT*SGSTCQ
Trigger: CTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAAT...GTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGTGCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR TCA 90 bp ACAAGTATCCTGCATGTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACATGCGCTGGCGATGCTTGGTaGTTCTGCTCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: TSILHVPILTGTWSGSTCAGDAW*FCSKPT
Trigger: TGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGC...GCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR TCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACATCTCAGAGACCCCCTTaGAGGAGACACGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTSQRPP*RRHACA
Trigger: AGCACAGGCGTGTCTCCTTCAAGGGGGTCTCTGAGA...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGTCTCAGAGACCCCCTTaGAGGAGACACGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRSQRPP*RRHACA
Trigger: AGCACAGGCGTGTCTCCTTCAAGGGGGTCTCTGAGA...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGTCTCAGAGACCCCCTTaGAGGAGACACGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLSQRPP*RRHACA
Trigger: AGCACAGGCGTGTCTCCTTCAAGGGGGTCTCTGAGA...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCCTGCCGGGAGGTGACTaGCCCAATCCGCCGTATAGC +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTLPGGD*PNPPYS
Trigger: GCTATACGGCGGATTGGGTCAGTCACCTCCCGGCAG...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGCTGCCGGGAGGTGACTaGCCCAATCCGCCGTATAGC +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKLPGGD*PNPPYS
Trigger: GCTATACGGCGGATTGGGTCAGTCACCTCCCGGCAG...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTCCCCCGCGGAGCTaGGGTTCCTTAGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LWMLILGCCPFGKKTQFSLPPRS*GSLGNL
Trigger: CAGGTTGCCTAAGGAACCTCAGCTCCGCGGGGGAAG...AGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTGATCACATACAACAGTaGGTCTACCAGCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVDHIQQ*VYQPLA
Trigger: TGCGAGGGGCTGGTAGACTCACTGTTGTATGTGATC...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR TCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTCGCCGGGGAGCCGGTTaGCCAGGTCTCGCATGGCGT +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFRRGAG*PGLAWR
Trigger: ACGCCATGCGAGACCTGGTCAACCGGCTCCCCGGCG...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp ACGCACAAGTATCCTGCATGTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACAGCTGGTGCTGGCGATaGTTGGTGATTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: THKYPACSDSDWHLERLYSWCWR*LVILLQ
Trigger: TTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCT...GTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGTGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR GCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATGTTGTGGAAACTCCCTaGTTCCTGGTATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHVVETP*FLVSTV
Trigger: GACAGTGGATACCAGGAAGCAGGGAGTTTCCACAAC...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTTGTGGTGGAGGAATATaGACTGGGGTTCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVCGGGI*TGVQRS
Trigger: CGACCTCTGAACCCCAGTGCATATTCCTCCACCACA...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR GCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCATTGGGATTGGAGGTCTaGCGGGAGGTGACTGACCCA +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPLGLEV*REVTDP
Trigger: TGGGTCAGTCACCTCCCGGCAGACCTCCAATCCCAA...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGTTGGGATTGGAGGTCTaGCGGGAGGTGACTGACCCA +
Preference number: 4 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRLGLEV*REVTDP
Trigger: TGGGTCAGTCACCTCCCGGCAGACCTCCAATCCCAA...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp AGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTTTCCATGGTTTGGGCTaGGGTACACTGGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: RGRGSVTDGEPNPLPREVFHGLG*GTLGCN
Trigger: ATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAA...AACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR GCA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGAGAAGGTCAACCAGATaGTTGATTCCCCCTAACCTA +
Preference number: 4 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWRRSTR*LIPPNL
Trigger: TAGGTTAGGGGGAATCAAGCATCTGGTTGACCTTCT...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp GACCCAATCCGCCGTATAGCTGTTGGGGAGGCGGGTCTCTGTGAGTACGGAGAGTTGGCTCAGAGTCTTTaGTGGGAGACTCTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: DPIRRIAVGEAGLCEYGELAQSL*WETLFL
Trigger: TAGGAAAAGAGTCTCCCAGCAAAGACTCTGAGCCAA...CTCTCCGTACTCACAGAGACCCGCCTCCCCAACAGCTATACGGCGGATTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCATCACCAGCTTCTCTATaGCTCCTGAGTCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPSPASL*LLSRPG
Trigger: CCCTGGCCGACTCAGGAGGCATAGAGAAGCTGGTGA...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGTCACCAGCTTCTCTATaGCTCCTGAGTCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLSPASL*LLSRPG
Trigger: CCCTGGCCGACTCAGGAGGCATAGAGAAGCTGGTGA...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR GCA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTAAATTGGTGAAGGTTTaGTGGAGCCAGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTKLVKV*WSQGTG
Trigger: GCCTGTACCCTGGCTCCAGCAAACCTTCACCAATTT...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCATTCCTGGCGGGTCTGTaGTTGCCCCTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPFLAGL*LPLLHQ
Trigger: TTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAA...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ATVELLQKAASNQQDQPNVEAAS*RVCGCP
Trigger: GGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCAC...ATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CCA 90 bp GTGATTCTGCTCCAAGCCTACATCTTTCTAGCTGACTGGCAACAATCTGCCTTTGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: VILLQAYIFLADWQQSAFVEAAS*RVCGCP
Trigger: GGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCAC...AAAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp AAATTTCTAAGCTTGTCTCTTTGTAGCTACTGCTCAAGGGGGTGGCAACTGTTGCCATGCCTGGGCCAGTaGAGGCAGCTTCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: KFLSLSLCSYCSRGWQLLPCLGQ*RQLPGG
Trigger: CCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGG...CAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAGAAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCGTGCAGCAGGTAATGTaGTGGAGGAATATGCACTGG +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLVQQVM*WRNMHW
Trigger: CCAGTGCATATTCCTCCACCACATTACCTGCTGCAC...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CGAGGGTCTCTGATTCCTAACAGTGCTGGTGAGGAAGAGGTGCTGCCGACTGACTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RGSLIPNSAGEEEVLPTDLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...GTCAGTCGGCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATGACCCCACCTGGCCTTaGGATGGGGAAGCTACTCGA +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDDPTWP*DGEATR
Trigger: TCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAGCCTGTCAGGCTGTCTaGCCTGGGTGGAACCATCCT +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPACQAV*PGWNHP
Trigger: AGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGC...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGAGCTCCACAGTTCCATaGTTTGGGCTGCGGTACACT +
Preference number: 4 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLSSTVP*FGLRYT
Trigger: AGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCT...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPAVCDP*SSTVPW
Trigger: CCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGC...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACACTGCCTACCCTACTGTaGGGCTTCTTTCCCCTACCC +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTLPTLL*GFFPLP
Trigger: GGGTAGGGGAAAGAAGCCCCACAGTAGGGTAGGCAG...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCCCAGGGCTCAGTAGCTaGGCAGTCGACTCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTPGLSS*AVDSAS
Trigger: GCTTGCGGAGTCGACTGCCCAGCTACTGAGCCCTGG...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 72 bp GTGTTCTTCAGAAGGCACCCCAGAAGGGCTCCCGGCTaGCAGATCTTAGGAACTTTCATGCTCGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: VFFRRHPRRAPG*QILGTFMLALV
Trigger: TACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCTTCTGGGGTGCCTTCTGAAGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 72 bp GGAGCCAGGGTACAGGCCTTTATGTGTGGCATCCCCTaGGCTATTGTAATACTGCATAGGTGGCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GARVQAFMCGIP*AIVILHRWLGP
Trigger: AGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCCACACATAAAGGCCTGTACCCTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
3UTR CAA 72 bp TGCTGTCTGTTGTCTGCCTTGCTCACGTTCTGGCTGTaGTGGAAACTCCCTGCTTCCTGGTATCCACTGTCG +
Preference number: 4 (lower is better)
Translates to: CCLLSALLTFWL*WKLPASWYPLS
Trigger: CGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR TCA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCCTACATCTTTCTAGCTaGCTGGCAACAATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVLHLSS*LATICL
Trigger: AAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAG...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR TCA 90 bp CTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTTCGGGGGTCGGTCACTaGCGGAGAGCCAAATCCACT +
Preference number: 4 (lower is better)
Translates to: LWMLILGCCPFGKKTQFSSGVGH*RRAKST
Trigger: AGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGA...AGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATTGGCGTATTTGCCTATaGGCTCCTTGTTGCGAACAT +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHWRICL*APCCEH
Trigger: ATGTTCGCAACAAGGAGCTCATAGGCAAATACGCCA...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR TCA 90 bp TTGAGCTGGTGCTGGCGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTCTATGCATGTTCCGATTCTaGCTGGCACCTGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LSWCWRCLVILLQAYIFLCMFRF*LAPGAA
Trigger: AGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCA...TAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR GCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGTCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLSTNEA*SGAGIP
Trigger: AGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGA...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTGTTGTGGAAACTCCCTaGTTCCTGGTATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVVVETP*FLVSTV
Trigger: GACAGTGGATACCAGGAAGCAGGGAGTTTCCACAAC...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR GCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACCTATGAATGAATGCTaGTGTCTGTTGTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPPMNEC*CLLSAL
Trigger: CAAGGCAGACAACAGACAGCAGCATTCATTCATAGG...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAAGCTACTCGAGTCTGTaGATCCGTCAGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPSYSSL*IRQGQW
Trigger: CCACTGACCCTGACGGATGCACAGACTCGAGTAGCT...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCGATACAACGCCGTCTaGGATCCTTGGAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLRYNAV*DPWSST
Trigger: TGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCG...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCAAGAAGGTCAACCAGATaGTTGATTCCCCCTAACCTA +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPRRSTR*LIPPNL
Trigger: TAGGTTAGGGGGAATCAAGCATCTGGTTGACCTTCT...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAGGCCGCCCGGATATATaGTGCAAACTTCCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPGRPDI*CKLPVA
Trigger: GGCAACTGGAAGTTTGCAGCATATATCCGGGCGGCC...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGGGCCGCCCGGATATATaGTGCAAACTTCCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRGRPDI*CKLPVA
Trigger: GGCAACTGGAAGTTTGCAGCATATATCCGGGCGGCC...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp CACTTCCAGTTCTCGGGTGAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGACTTCTCAGTTGAGCTaGTGCTGGCGATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HFQFSGESLKLKLLQTHKTSQLS*CWRCLV
Trigger: CACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGT...CTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCATGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPWRNMH*GSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCA...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGTGGAGGAATATGCACTaGGGTTCAGAGGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLWRNMH*GSEVGG
Trigger: ACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCA...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATCACCTGGCCTTGGGATaGGGAAGCTACTCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDHLALG*GSYSSL
Trigger: CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTG...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCTGGGCTGCGGTACACTaGGCTGTAATAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLWAAVH*AVIGPP
Trigger: GGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCA...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATTGGGCTGCGGTACACTaGGCTGTAATAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDWAAVH*AVIGPP
Trigger: GGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCA...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTGCCGTCTGCGATCCTTaGAGCTCCACAGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCAVCDP*SSTVPW
Trigger: CCATGGAACTGTGGAGCTCCAAGGATCGCAGACGGC...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCAGTGTTCACACACGTGTaGATCACATACAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPVFTHV*ITYNSE
Trigger: CTCACTGTTGTATGTGATCCACACGTGTGTGAACAC...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGTGTGGACTCTGCCCCTaGTGCATTCCTCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRCGLCP*CIPRIP
Trigger: AGGAATGCGAGGAATGCACCAGGGGCAGAGTCCACA...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS-3UTR TCA 90 bp CAGTTGAGCTGGTGCTGGCGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTCTTCCAGTTCTCGGGTaGGTCGCTGAAACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QLSWCWRCLVILLQAYIFLPVLG*VAETEA
Trigger: AGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAG...AAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR TCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCCTACATCTTTCTAGCTaGCTGGCAACAATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLLHLSS*LATICL
Trigger: AAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAG...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTACATCTTTCTAGCTaGCTGGCAACAATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSLHLSS*LATICL
Trigger: AAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAG...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR TCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTGCTGGCGATGCTTGGTaGTTCTGCTCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCAGDAW*FCSKPT
Trigger: TGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGC...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp GGGTGGCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCGCTGGCGATGCTTGGTaGTTCTGCTCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: GWQLLSYFRKLLQTSKISAGDAW*FCSKPT
Trigger: TGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGC...GCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR TCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAGCTGGCGATGCTTGGTaGTTCTGCTCCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPAGDAW*FCSKPT
Trigger: TGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGC...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR TCA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTAGATGTCTGTTCTGGTaGATAGAGGGTTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTRCLFW*IEGSLF
Trigger: GAACAAGGAACCCTCTATTCACCAGAACAGACATCT...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp AGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTTGCTCTAGATGGAACTaGACTAACTCTTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: RGRGSVTDGEPNPLPREVCSRWN*TNSSHG
Trigger: GCCATGAGAAGAGTTAGTTCAGTTCCATCTAGAGCA...AACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR TCA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTAGGTCTGCCGGGAGGTaGCTGACCCAATCCGCCGTA +
Preference number: 4 (lower is better)
Translates to: LINVILLLSELLHVMNSPRSAGR*LTQSAV
Trigger: TACGGCGGATTGGGTCAGTCACCTCCCGGCAGACCT...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTACGGCGGTCATCCCTaGGCGTTTGGGGGACGACGA +
Preference number: 4 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQYGGHP*AFGGRR
Trigger: TCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTA...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTATTTCCAATACCTACTaGACCTGTGCGATACAACGC +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSISNTY*TCAIQR
Trigger: GCGTTGTATCGCACAGGTTCAGTAGGTATTGGAAAT...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR TCA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGATCACATACAACAGTaGGTCTACCAGCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKDHIQQ*VYQPLA
Trigger: TGCGAGGGGCTGGTAGACTCACTGTTGTATGTGATC...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR TCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCTCAGTGATTGGAAACTaGAGTGGTTACGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLSVIGN*SGYVPE
Trigger: TTCTGGGACGTAACCACTTCAGTTTCCAATCACTGA...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTGGTCTCGGGTTCCATaGCTGGGCCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LINVILLLSELLHVMNSPWSRVP*LGQWRQ
Trigger: CTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCA...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATCTGCTGTCTGTTGTCTaGCTTGCTCACGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHLLSVV*LAHVLA
Trigger: AGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAG...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHDPMNE*CCLLSA
Trigger: GGCAGACAACAGACAGCAGCATTCATTCATAGGATC...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCAGCTACTCGAGTCTGTaGATCCGTCAGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLSYSSL*IRQGQW
Trigger: CCACTGACCCTGACGGATGCACAGACTCGAGTAGCT...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp ACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCAGCTACTCGAGTCTGTaGATCCGTCAGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: TAAVRIAPCHEQSFAVKVSYSSL*IRQGQW
Trigger: CCACTGACCCTGACGGATGCACAGACTCGAGTAGCT...GACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CATAGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTTATATAGGAGTAATGTaGAAGTCGGGAGACACGGCA +
Preference number: 4 (lower is better)
Translates to: HRNSVSLSGCLAWVEPSSYIGVM*KSGDTA
Trigger: TGCCGTGTCTCCCGACTTGCACATTACTCCTATATA...AGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCGATACAACGCCGTCTaGGATCCTTGGAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLRYNAV*DPWSST
Trigger: TGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCG...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGAGTTCTCCACCGTCTTaGTGTCGTAATCGGATGTGT +
Preference number: 4 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLSSPPS*CRNRMC
Trigger: ACACATCCGATTACGACAGCAAGACGGTGGAGAACT...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCTTGGCTCAGAGTCTTTaGTGGGAGACTCTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLLAQSL*WETLFL
Trigger: TAGGAAAAGAGTCTCCCAGCAAAGACTCTGAGCCAA...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTTTGGCTCAGAGTCTTTaGTGGGAGACTCTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RGRGSVTDGEPNPLPREVLAQSL*WETLFL
Trigger: TAGGAAAAGAGTCTCCCAGCAAAGACTCTGAGCCAA...AACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR GCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTGCTATGGGGACCTCTaGCTACCCTACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQCYGDL*LPYCGA
Trigger: AGCCCCACAGTAGGGTAGGCAGAGGTCCCCATAGCA...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIVEAAS*RVCGCP
Trigger: GGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCAC...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCAATCTTTCTAGCTGACTaGCAACAATCTGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YALGFRGRGSVTDGEPNPIFLAD*QQSAFP
Trigger: TGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGAT...TGGATTTGGCTCTCCGTCAGTGACCGACCCCCGACCTCTGAACCCCAGTGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR CCA 90 bp CAGTTGAGCTGGTGCTGGCGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTCAGTTGAGCTGGTGCTaGCGATGCTTGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: QLSWCWRCLVILLQAYIFQLSWC*RCLVIL
Trigger: CAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG...AAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACAACTTCTCAGTTGAGCTaGTGCTGGCGATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTTSQLS*CWRCLV
Trigger: CACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGT...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTTCTCAGTTGAGCTaGTGCTGGCGATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHTSQLS*CWRCLV
Trigger: CACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGT...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR CCA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATGCCTTGCTCACGTTCTaGCTGTTGTGGAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHALLTF*LLWKLP
Trigger: AGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGC...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACGAGGGGTTGGTCCGTTaGGATTGGAGGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: HPLINVILLLSELLHVMNEGLVR*DWRSAG
Trigger: CCCGGCAGACCTCCAATCCCAACGGACCAACCCCTC...GTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATACCCCACTCTGGCGGTaGTTTGGTATTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDTPLWR*FGIEGL
Trigger: CAACCCCTCAATACCAAACCACCGCCAGAGTGGGGT...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CCTTGCTCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTGCTGTCTGGCCTGGGTaGAACCATCCTCTCATAAAT +
Preference number: 4 (lower is better)
Translates to: PCSRSGCCGNSLLPGIHCAVWPG*NHPLIN
Trigger: ATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGC...ACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CCA 90 bp GGCATCCCCTTGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTCCACAGTTCCATGGTTTaGGCTGCGGTACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: GIPLAIVILHRWLGPIVFHSSMV*AAVHWA
Trigger: AGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTG...GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAAGCTCCACAGTTCCATaGTTTGGGCTGCGGTACACT +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPSSTVP*FGLRYT
Trigger: AGTGTACCGCAGCCCAAACCATGGAACTGTGGAGCT...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TTCCAGTTCTCGGGTGAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTATTGTTCCGATTCTGACTaGCACCTGGAGCGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: FQFSGESLKLKLLQTHKYCSDSD*HLERLY
Trigger: GTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACA...ATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR TCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCGGCCCGATTGGCTACTaGTGGCTGAACCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTGPIGY*WLNQCL
Trigger: CAAACACTGGTTCAGCCATCAGTAGCCAATCGGGCC...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATCCAACTCCATCCCATTaGTCTTCTTGCGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDPTPSH*SSCGVL
Trigger: GAGGACTCCGCAAGAAGATCAATGGGATGGAGTTGG...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR TCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTCACCACTTTCAGAGATaGTCTGTCGCCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCHHFQR*SVAPAF
Trigger: AAAGGCAGGGGCGACAGATCATCTCTGAAAGTGGTG...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCACTCTGTTGGGCATCTTaGTGCTACACCCATGAGTCT +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPLCWAS*CYTHES
Trigger: AGACTCATGGGTGTAGCATCAAGATGCCCAACAGAG...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR TCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCGTTCCTAGTTTTCCATaGTGGCACTTAACCAATGTG +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLVPSFP*WHLTNV
Trigger: CACATTGGTTAAGTGCCATCATGGAAAACTAGGAAC...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCGATTGGAGACCCAGGTaGGTTATTTTCAACCCAAAT +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLDWRPR*VIFNPN
Trigger: ATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATC...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AAGGGGGTGGCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATTCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: KGVATVELLQKAASNQQDSTNEA*SGAGIP
Trigger: AGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGA...ATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR GCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACATCTCAGTTGAGCTGGTaGTGGCGATGCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTSQLSW*WRCLVI
Trigger: AATCACCAAGCATCGCCAGCACCAGCTCAACTGAGA...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGGTCTGTTGTCTGCCTTaGTCACGTTCTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLVCCLP*SRSGCC
Trigger: ACAACAGCCAGAACGTGAGCAAGGCAGACAACAGAC...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCTGTGGTGGAGGAATATaGACTGGGGTTCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLCGGGI*TGVQRS
Trigger: CGACCTCTGAACCCCAGTGCATATTCCTCCACCACA...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGAGCTACTCGAGTCTGTaGATCCGTCAGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLSYSSL*IRQGQW
Trigger: CCACTGACCCTGACGGATGCACAGACTCGAGTAGCT...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGCGATACAACGCCGTCTaGGATCCTTGGAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQRYNAV*DPWSST
Trigger: TGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCG...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAAGTAATGCTGTGTGGTaGTATGGGGACCTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPSNAVW*YGDLCL
Trigger: TAGGCAGAGGTCCCCATAGCACCACACAGCATTACT...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACACCTGGTGTCCCTCATTaGCTCCACAGATGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTPGVPH*LHRWRK
Trigger: TTTTCTCCATCTGTGGAGGCAATGAGGGACACCAGG...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTACATCTGGCGACCTCTaGCATCTAACAAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCTSGDL*HLTRAV
Trigger: GACAGCCCTTGTTAGATGGCAGAGGTCGCCAGATGT...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AAGTATCCTGCATGTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACATGCCAAGGGATGTAAACACCTaGTCCTTCACGGATGCTAGA +
Preference number: 4 (lower is better)
Translates to: KYPACSDSDWHLERLYMPRDVNT*SFTDAR
Trigger: TCTAGCATCCGTGAAGGAGCAGGTGTTTACATCCCT...TGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCATCTTTCTAGCTGACTaGCAACAATCTGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLIFLAD*QQSAFP
Trigger: TGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGAT...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAGCCTTGCTCACGTTCTaGCTGTTGTGGAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPALLTF*LLWKLP
Trigger: AGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGC...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCACAGCAGGTAATGTGGTaGAGGAATATGCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPQQVMW*RNMHWG
Trigger: ACCCCAGTGCATATTCCTCCACCACATTACCTGCTG...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTGTGCAGCAGGTAATGTaGTGGAGGAATATGCACTGG +
Preference number: 4 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTVQQVM*WRNMHW
Trigger: CCAGTGCATATTCCTCCACCACATTACCTGCTGCAC...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGGTGCAGCAGGTAATGTaGTGGAGGAATATGCACTGG +
Preference number: 4 (lower is better)
Translates to: CQAVWPGWNHPLINVILLVQQVM*WRNMHW
Trigger: CCAGTGCATATTCCTCCACCACATTACCTGCTGCAC...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGACCCCACTCTGGCGGTaGTTTGGTATTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKTPLWR*FGIEGL
Trigger: CAACCCCTCAATACCAAACCACCGCCAGAGTGGGGT...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGACCCCACTCTGGCGGTaGTTTGGTATTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLTPLWR*FGIEGL
Trigger: CAACCCCTCAATACCAAACCACCGCCAGAGTGGGGT...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCATCCGTCAGGGTCAGTaGGGACCCCACTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIIRQGQ*GPHSGG
Trigger: ACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGAT...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 4 (lower is better)
Translates to: HPLINVILLLSELLHVMNSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...GTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTCATCCCTGAGCGTTTaGGGGACGACGACCCCACCT +
Preference number: 4 (lower is better)
Translates to: LINVILLLSELLHVMNSPSSLSV*GTTTPP
Trigger: AGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGA...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATGCTGTCTGGCCTGGGTaGAACCATCCTCTCATAAAT +
Preference number: 4 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHAVWPG*NHPLIN
Trigger: ATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGC...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGCACAGTTCCATGGTTTaGGCTGCGGTACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQHSSMV*AAVHWA
Trigger: AGCCCAGTGTACCGCAGCCCAAACCATGGAACTGTG...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCATTTCCATTTCACTTTaGATGCTCATCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TARPEKASDFGPGVPHCLISISL*MLILGC
Trigger: GCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAAT...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATTTGGTGAAGGTTTGCTaGAGCCAGGGTACAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDLVKVC*SQGTGL
Trigger: AAGGCCTGTACCCTGGCTCCAGCAAACCTTCACCAA...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR TCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGCTTCCAGTTCTCGGGTaGGTCGCTGAAACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQLPVLG*VAETEA
Trigger: AGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAG...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp ATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTTGTCCTTCAGCTCTTaGATTCCTCACCACATGGTT +
Preference number: 4 (lower is better)
Translates to: IGVMCKSGDTAERRSCPSLSFSS*IPHHMV
Trigger: AACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAA...GCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGAACAGTCCTTTGCAGTaGAGGTCCCAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQNSPLQ*RSQMLW
Trigger: CCACAGCATCTGGGACCTTCACTGCAAAGGACTGTT...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGGGAAACTGCAAGACCTaGGAAGGCCTCAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQGNCKT*EGLRLW
Trigger: CCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGTTTCC...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTGCTTCAACCCAGATCTaGAGATACCAGGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCASTQI*RYQVQG
Trigger: TCCCTGAACCTGGTATCTTCAGATCTGGGTTGAAGC...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAAATCCGCCGTATAGCTaGACCAGTGTTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPNPPYS*TSVCPS
Trigger: TGAAGGACAAACACTGGTTCAGCTATACGGCGGATT...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481115.2
CDS-3UTR GCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTTGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAG +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFWRVCG*PSSTNE
Trigger: CTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCA...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp GTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATAGTTTATGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAG +
Preference number: 4 (lower is better)
Translates to: VELLQKAASNQQDQPNSLWRVCG*PSSTNE
Trigger: CTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCA...TAAACTATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR GCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCAGCTGGTGCTGGCGATaGTTGGTGATTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTSWCWR*LVILLQ
Trigger: TTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCT...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp GAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTATCCTGCATGTTCCGATTCTCAGTTGAGCTGGTaGTGGCGATGCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: ESLKLKLLQTHKYPACSDSQLSW*WRCLVI
Trigger: AATCACCAAGCATCGCCAGCACCAGCTCAACTGAGA...ATCGGAACATGCAGGATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR GCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCGTTGTGGAAACTCCCTaGTTCCTGGTATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLVVETP*FLVSTV
Trigger: GACAGTGGATACCAGGAAGCAGGGAGTTTCCACAAC...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp ACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCGTCTGTTGTCTGCCTTaGTCACGTTCTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TAAVRIAPCHEQSFAVKVVCCLP*SRSGCC
Trigger: ACAACAGCCAGAACGTGAGCAAGGCAGACAACAGAC...GACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCTGTGGTGGAGGAATATaGACTGGGGTTCAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTCGGGI*TGVQRS
Trigger: CGACCTCTGAACCCCAGTGCATATTCCTCCACCACA...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTACCTACTGAACCTGTaGGATACAACGCCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQYLLNL*DTTPSA
Trigger: CGCAGACGGCGTTGTATCGCACAGGTTCAGTAGGTA...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCGCCCGGATATATGCTaGAAACTTCCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LWMLILGCCPFGKKTQFSRPDIC*KLPVAS
Trigger: GCTGGCAACTGGAAGTTTGCAGCATATATCCGGGCG...AGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACACCATTTCACTTTGGATaGTCATCTTGGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTPFHFG*SSWAAV
Trigger: GACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGG...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCAATACCTGAACCTGTaGGATACAACGCCGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLQYLNL*DTTPSA
Trigger: CGCAGACGGCGTTGTATCGCACAGGTTCAGGTATTG...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGGCCTTGCTCACGTTCTaGCTGTTGTGGAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLALLTF*LLWKLP
Trigger: AGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGC...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCAGAATTCCTCACCACATaGTTGTTAGTTGATCCTATG +
Preference number: 4 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSEFLTT*LLVDPM
Trigger: CATAGGATCAACTAACAACCATGTGGTGAGGAATTC...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GTCGGGGGTCGGTCACTGACGGAGAGCCAAATCCACTACCCAGAGAAGTTCTCAGAATTCCTCACCACATaGTTGTTAGTTGATCCTATG +
Preference number: 4 (lower is better)
Translates to: VGGRSLTESQIHYPEKFSEFLTT*LLVDPM
Trigger: CATAGGATCAACTAACAACCATGTGGTGAGGAATTC...TGAGAACTTCTCTGGGTAGTGGATTTGGCTCTCCGTCAGTGACCGACCCCCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATTTCTCATGGCCCGATTaGCTACTGATGGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDFSWPD*LLMAEP
Trigger: TGGTTCAGCCATCAGTAGCCAATCGGGCCATGAGAA...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCAGCAGGTAATGTGGTaGAGGAATATGCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLQQVMW*RNMHWG
Trigger: ACCCCAGTGCATATTCCTCCACCACATTACCTGCTG...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATCACCTGGCCTTGGGATaGGGAAGCTACTCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDHLALG*GSYSSL
Trigger: CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTG...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATGCTGTCTGGCCTGGGTaGAACCATCCTCTCATAAAT +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDAVWPG*NHPLIN
Trigger: ATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGC...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTTTTGGATGCTCATCTTaGGCTGCTGTCCATTCGGCA +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCFGCSS*AAVHSA
Trigger: TGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAA...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGGTCGACTCCGCAAGCTaGCTCGAGTGTTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQVDSAS*LECSSE
Trigger: TTCTGAAGAACACTCGAGCCAGCTTGCGGAGTCGAC...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTTTCCTCAGGAACATCTaGCGACCTCTGCCATCTAAC +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCFLRNI*RPLPSN
Trigger: GTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAA...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 72 bp GATCCTATGAATGAATGCTGCTGTCTGTTGTCTGCCTaGCTCACGTTCTGGCTGTTGTGGAAACTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DPMNECCCLLSA*LTFWLLWKLPA
Trigger: AGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAGCATTCATTCATAGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR TCA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGTTGTCCTTCAGCTCTTaGATTCCTCACCACATGGTT +
Preference number: 4 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKLSFSS*IPHHMV
Trigger: AACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAA...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACAATTTCCAATACCTACTaGACCTGTGCGATACAACGC +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTISNTY*TCAIQR
Trigger: GCGTTGTATCGCACAGGTTCAGTAGGTATTGGAAAT...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGTCTCAGTTGAGCTGGTaGTGGCGATGCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKSQLSW*WRCLVI
Trigger: AATCACCAAGCATCGCCAGCACCAGCTCAACTGAGA...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR GCA 90 bp CTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTGTCTGTTGTCTGCCTTaGTCACGTTCTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LWMLILGCCPFGKKTQFSVCCLP*SRSGCC
Trigger: ACAACAGCCAGAACGTGAGCAAGGCAGACAACAGAC...AGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCACCTATGAATGAATGCTaGTGTCTGTTGTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPPMNEC*CLLSAL
Trigger: CAAGGCAGACAACAGACAGCAGCATTCATTCATAGG...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGCCTATGAATGAATGCTaGTGTCTGTTGTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKPMNEC*CLLSAL
Trigger: CAAGGCAGACAACAGACAGCAGCATTCATTCATAGG...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RAPGLQILGTFMLALVFPDPMNE*CCLLSA
Trigger: GGCAGACAACAGACAGCAGCATTCATTCATAGGATC...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTCCATGGTTTGGGCTaGGGTACACTGGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQFHGLG*GTLGCN
Trigger: ATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAA...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGTTCCATGGTTTGGGCTaGGGTACACTGGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKFHGLG*GTLGCN
Trigger: ATTACAGCCCAGTGTACCGCAGCCCAAACCATGGAA...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTAGTTCTCCACCGTCTTaGTGTCGTAATCGGATGTGT +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCSSPPS*CRNRMC
Trigger: ACACATCCGATTACGACAGCAAGACGGTGGAGAACT...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCAGTTCTCCACCGTCTTaGTGTCGTAATCGGATGTGT +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLSSPPS*CRNRMC
Trigger: ACACATCCGATTACGACAGCAAGACGGTGGAGAACT...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR GCA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTATGCTCATCTTGGGCTaGTGTCCATTCGGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCMLILG*CPFGKK
Trigger: TTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCAT...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TTGGTGATTCTGCTCCAAGCCTACATCTTTCTAGCTGACTGGCAACAATCTGCCTGGAGCGGCTCTACATaGCAGTCATCCCAATGTACT +
Preference number: 4 (lower is better)
Translates to: LVILLQAYIFLADWQQSAWSGST*QSSQCT
Trigger: AGTACATTGGGATGACTGGCATGTAGAGCCGCTCCA...GGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp AAGTATCCTGCATGTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACATGCCAATCTTTCTAGCTGACTaGCAACAATCTGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KYPACSDSDWHLERLYMPIFLAD*QQSAFP
Trigger: TGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGAT...TGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCGTGGGGACCCCACTCTaGCGGTGGTTTGGTATTGAG +
Preference number: 4 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIVGTPL*RWFGIE
Trigger: CTCAATACCAAACCACCGCCAGAGTGGGGTCCCCAC...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATTCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDSGCLA*VEPSSH
Trigger: ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGA...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACTCAGGCTGTCTGGCCTaGGTGGAACCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: HPLINVILLLSELLHVMNSGCLA*VEPSSH
Trigger: ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGA...GTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp TGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTTCTGCCTGTCAGGCTGTCTaGCCTGGGTGGAACCATCCT +
Preference number: 4 (lower is better)
Translates to: WCQPNKCPTTVLMKLLSSACQAV*PGWNHP
Trigger: AGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGC...AGAACTCAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATGTGTTCACACACGTGTaGATCACATACAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHVFTHV*ITYNSE
Trigger: CTCACTGTTGTATGTGATCCACACGTGTGTGAACAC...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATTGCTGTGTGGTGCTATaGGGACCTCTGCCTACCCTA +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDCCVVL*GPLPTL
Trigger: TAGGGTAGGCAGAGGTCCCCATAGCACCACACAGCA...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCGCTAGGACTGAAGGGTaGAAACTGCAAGACCTGAGA +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTARTEG*KLQDLR
Trigger: TCTCAGGTCTTGCAGTTTCCACCCTTCAGTCCTAGC...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 72 bp TCTCTTTGTAGCTACTGCTCAAGGGGGTGGCAACTGTaGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SLCSYCSRGWQL*SYFRKLLQTSK
Trigger: CTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR CAA 72 bp GAAATGACTTCTCAGTTGAGCTGGTGCTGGCGATGCTaGGTGATTCTGCTCCAAGCCTACATCTTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: EMTSQLSWCWRC*VILLQAYIFLA
Trigger: AGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTGAGAAGTCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR TCA 90 bp GAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTATCCTGCATGTTCCGATCTACATCTTTCTAGCTaGCTGGCAACAATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ESLKLKLLQTHKYPACSDLHLSS*LATICL
Trigger: AAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAG...ATCGGAACATGCAGGATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR TCA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATAGATGTCTGTTCTGGTaGATAGAGGGTTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDRCLFW*IEGSLF
Trigger: GAACAAGGAACCCTCTATTCACCAGAACAGACATCT...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCTTGTCCTTCAGCTCTTaGATTCCTCACCACATGGTT +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLLSFSS*IPHHMV
Trigger: AACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAA...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp TGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTTCTGCGGTGGTTTGGTATTaGGGGGTTGGTCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: WCQPNKCPTTVLMKLLSSAVVWY*GVGPLG
Trigger: TCCCAACGGACCAACCCCTCAATACCAAACCACCGC...AGAACTCAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTAATTGCTCCATGTCATaGACAGTCCTTTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTNCSMS*TVLCSE
Trigger: TTCACTGCAAAGGACTGTTCATGACATGGAGCAATT...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAAATTGCTCCATGTCATaGACAGTCCTTTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPNCSMS*TVLCSE
Trigger: TTCACTGCAAAGGACTGTTCATGACATGGAGCAATT...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGGAGCTCCGCCAGGTATaGGGCAGCCAGGGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLELRQV*GSQGSV
Trigger: TACTGAGCCCTGGCTGCCTCATACCTGGCGGAGCTC...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTACGTCCCAGAAGTCCTaGTGCCAGTTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFTSQKS*CQFLRN
Trigger: GTTCCTGAGGAACTGGCATCAGGACTTCTGGGACGT...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CAGCAAGATCAGCCCAATAGTTTAATGTTCATACCAACAATCAGAAACAACAGATGGTCTCGGGTTCCATaGCTGGGCCAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QQDQPNSLMFIPTIRNNRWSRVP*LGQWRQ
Trigger: CTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCA...TCTGTTGTTTCTGATTGTTGGTATGAACATTAAACTATTGGGCTGATCTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR GCA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTCTGCTGTCTGTTGTCTaGCTTGCTCACGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LINVILLLSELLHVMNSPLLSVV*LAHVLA
Trigger: AGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAG...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGWNHPLINVILLLSELLDPMNE*CCLLSA
Trigger: GGCAGACAACAGACAGCAGCATTCATTCATAGGATC...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGCGCCCGGATATATGCTaGAAACTTCCAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQRPDIC*KLPVAS
Trigger: GCTGGCAACTGGAAGTTTGCAGCATATATCCGGGCG...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR GCA 90 bp GCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATTACTGGTGCTGGCGATaGTTGGTGATTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ATVELLQKAASNQQDQPNYWCWR*LVILLQ
Trigger: TTGGAGCAGAATCACCAAGCATCGCCAGCACCAGTA...ATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR GCA 90 bp GGGTGGCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCAACACAAGATACTGGTaGTGGCGATGCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: GWQLLSYFRKLLQTSKISNTRYW*WRCLVI
Trigger: AATCACCAAGCATCGCCAGCACCAGTATCTTGTGTT...GCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR GCA 90 bp GCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATTCTCTTTGTAGCTACTaGTCAAGGGGGTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: ATVELLQKAASNQQDQPNSLCSY*SRGWQL
Trigger: CAGTTGCCACCCCCTTGAGCAGTAGCTACAAAGAGA...ATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGCTCGGGTTCCATGCCTaGGCCAGTGGAGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLLGFHA*ASGGSF
Trigger: GAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAG...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TCAAACCAGCAAGATCAGCCCAATAGTTTAATGTTCATACCAACAATCAGAAACCTCGGGTTCCATGCCTaGGCCAGTGGAGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SNQQDQPNSLMFIPTIRNLGFHA*ASGGSF
Trigger: GAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAG...GTTTCTGATTGTTGGTATGAACATTAAACTATTGGGCTGATCTTGCTGGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CCA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTATCTTTCTAGCTGACTaGCAACAATCTGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTIFLAD*QQSAFP
Trigger: TGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGAT...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATCAGTTGAGCTGGTGCTaGCGATGCTTGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDQLSWC*RCLVIL
Trigger: CAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTACCCCACTCTGGCGGTaGTTTGGTATTGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFTPLWR*FGIEGL
Trigger: CAACCCCTCAATACCAAACCACCGCCAGAGTGGGGT...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAGTGTTCACACACGTGTaGATCACATACAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPVFTHV*ITYNSE
Trigger: CTCACTGTTGTATGTGATCCACACGTGTGTGAACAC...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTCTCAGACTTTGGGCCTaGTGTCCCTCATTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFLRLWA*CPSLPP
Trigger: TGGAGGCAATGAGGGACACCAGGCCCAAAGTCTGAG...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGAGATGTCTGTTCTGGTaGATAGAGGGTTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKRCLFW*IEGSLF
Trigger: GAACAAGGAACCCTCTATTCACCAGAACAGACATCT...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCTTGTCCTTCAGCTCTTaGATTCCTCACCACATGGTT +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTLSFSS*IPHHMV
Trigger: AACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAA...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGATTTCCAATACCTACTaGACCTGTGCGATACAACGC +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKISNTY*TCAIQR
Trigger: GCGTTGTATCGCACAGGTTCAGTAGGTATTGGAAAT...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR TCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCGATCACATACAACAGTaGGTCTACCAGCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIDHIQQ*VYQPLA
Trigger: TGCGAGGGGCTGGTAGACTCACTGTTGTATGTGATC...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCTCAGTTGAGCTGGTaGTGGCGATGCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQSQLSW*WRCLVI
Trigger: AATCACCAAGCATCGCCAGCACCAGCTCAACTGAGA...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR GCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTCTGCTGTCTGTTGTCTaGCTTGCTCACGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFLLSVV*LAHVLA
Trigger: AGCCAGAACGTGAGCAAGGCAGACAACAGACAGCAG...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGCCTATGAATGAATGCTaGTGTCTGTTGTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKPMNEC*CLLSAL
Trigger: CAAGGCAGACAACAGACAGCAGCATTCATTCATAGG...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGGATCCTATGAATGAATaGTGCTGTCTGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LIYRSNVQVGRHGRTKVLDPMNE*CCLLSA
Trigger: GGCAGACAACAGACAGCAGCATTCATTCATAGGATC...CAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTATATAGGAGTAATGTaGAAGTCGGGAGACACGGCA +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQYIGVM*KSGDTA
Trigger: TGCCGTGTCTCCCGACTTGCACATTACTCCTATATA...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCAGAAGGTCAACCAGATaGTTGATTCCCCCTAACCTA +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTRRSTR*LIPPNL
Trigger: TAGGTTAGGGGGAATCAAGCATCTGGTTGACCTTCT...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACAGATCCGTTTTTGAAATaGTGCCTGTTACAGCATTAC +
Preference number: 4 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTDPFLK*CLLQHY
Trigger: GTAATGCTGTAACAGGCAGCATTTCAAAAACGGATC...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TCAAACCAGCAAGATCAGCCCAATAGTTTAATGTTCATACCAACAATCAGAAACTTCCTGGCGGGTCTGTaGTTGCCCCTCCTCCACCAA +
Preference number: 4 (lower is better)
Translates to: SNQQDQPNSLMFIPTIRNFLAGL*LPLLHQ
Trigger: TTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAA...GTTTCTGATTGTTGGTATGAACATTAAACTATTGGGCTGATCTTGCTGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTGCCTTGCTCACGTTCTaGCTGTTGTGGAAACTCCCT +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFALLTF*LLWKLP
Trigger: AGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGGC...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGGTATTGAGGGGTTaGTCCGTTGGGATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LINVILLLSELLHVMNSPLVLRG*SVGIGG
Trigger: ACCTCCAATCCCAACGGACCAACCCCTCAATACCAA...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGGACCCCACCTGGCCTTaGGATGGGGAAGCTACTCGA +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLDPTWP*DGEATR
Trigger: TCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTGTGTTCACACACGTGTaGATCACATACAACAGTGAG +
Preference number: 4 (lower is better)
Translates to: LWMLILGCCPFGKKTQFSVFTHV*ITYNSE
Trigger: CTCACTGTTGTATGTGATCCACACGTGTGTGAACAC...AGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTTCTGAAGGCCTCAGACTTTaGGCCTGGTGTCCCTCATTG +
Preference number: 4 (lower is better)
Translates to: WCQPNKCPTTVLMKLLSSEGLRL*AWCPSL
Trigger: CAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTC...AGAACTCAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATACAAGATACTGGTGCTaGCGATGCTTGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: ATVELLQKAASNQQDQPNTRYWC*RCLVIL
Trigger: CAGAATCACCAAGCATCGCCAGCACCAGTATCTTGT...ATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR CAA 72 bp CGCACTGGTATTTCCATTTCACTTTGGATGCTCATCTaGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RTGISISLWMLI*GCCPFGKKTQF
Trigger: AAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 72 bp GAACTTTCATGCTCGCACTGGTATTTCCATTTCACTTaGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAA +
Preference number: 4 (lower is better)
Translates to: ELSCSHWYFHFT*DAHLGLLSIRQ
Trigger: TTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATACCAGTGCGAGCATGAAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp GCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATCTACATCTTTCTAGCTaGCTGGCAACAATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ATVELLQKAASNQQDQPNLHLSS*LATICL
Trigger: AAGGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAG...ATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR TCA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGAATTGCTCCATGTCATaGACAGTCCTTTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQNCSMS*TVLCSE
Trigger: TTCACTGCAAAGGACTGTTCATGACATGGAGCAATT...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp TGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTTCTCCAACTCCATCCCATTaGTCTTCTTGCGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: WCQPNKCPTTVLMKLLSSPTPSH*SSCGVL
Trigger: GAGGACTCCGCAAGAAGATCAATGGGATGGAGTTGG...AGAACTCAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATTGGCGTATTTGCCTATaGGCTCCTTGTTGCGAACAT +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDWRICL*APCCEH
Trigger: ATGTTCGCAACAAGGAGCTCATAGGCAAATACGCCA...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGAGTTCTCCACCGTCTTaGTGTCGTAATCGGATGTGT +
Preference number: 4 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQSSPPS*CRNRMC
Trigger: ACACATCCGATTACGACAGCAAGACGGTGGAGAACT...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CCA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAGAATTCCTCACCACATaGTTGTTAGTTGATCCTATG +
Preference number: 4 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPEFLTT*LLVDPM
Trigger: CATAGGATCAACTAACAACCATGTGGTGAGGAATTC...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCTTCTCATGGCCCGATTaGCTACTGATGGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIFSWPD*LLMAEP
Trigger: TGGTTCAGCCATCAGTAGCCAATCGGGCCATGAGAA...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCGCTGTCTGGCCTGGGTaGAACCATCCTCTCATAAAT +
Preference number: 4 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIAVWPG*NHPLIN
Trigger: ATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGC...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGTGGGCTGCGGTACACTaGGCTGTAATAGGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLWAAVH*AVIGPP
Trigger: GGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCA...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATGTTCAGGGAAGTCAGTaGTTGGAAACTGAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDVQGSQ*LETEVV
Trigger: AACCACTTCAGTTTCCAATCACTGACTTCCCTGAAC...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTGAAGGTCCCAGATaGTGTGGTACGGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLSEGPR*CGTAVI
Trigger: GATGACCGCCGTACCACAGCATCTGGGACCTTCACT...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATATCTTTCTAGCTGACTaGCAACAATCTGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ATVELLQKAASNQQDQPNIFLAD*QQSAFP
Trigger: TGGAAAGGCAGATTGTTGCCAGTCAGCTAGAAAGAT...ATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CCA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCGAATTCCTCACCACATaGTTGTTAGTTGATCCTATG +
Preference number: 4 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTEFLTT*LLVDPM
Trigger: CATAGGATCAACTAACAACCATGTGGTGAGGAATTC...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGAATTCCTCACCACATaGTTGTTAGTTGATCCTATG +
Preference number: 4 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKEFLTT*LLVDPM
Trigger: CATAGGATCAACTAACAACCATGTGGTGAGGAATTC...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATGATTGGAAACTGAAGTaGTTACGTCCCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDDWKLK*LRPRSP
Trigger: AGGACTTCTGGGACGTAACCACTTCAGTTTCCAATC...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTTCTTCAGTTGGCTTGGGCTaGCTCCGATTCCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: WCQPNKCPTTVLMKLLSSSVGLG*LRFPCF
Trigger: AAAACAAGGGAATCGGAGCCAGCCCAAGCCAACTGA...AGAACTCAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTTCTTATTGTCAGTTGGCTTaGGCTGGCTCCGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: WCQPNKCPTTVLMKLLSSYCQLA*AGSDSL
Trigger: AAGGGAATCGGAGCCAGCCCAAGCCAACTGACAATA...AGAACTCAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATAAAGTTATTGTCAGTTaGCTTGGGCTGGCTCCGATT +
Preference number: 4 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDKVIVS*LGLAPI
Trigger: AATCGGAGCCAGCCCAAGCCAACTGACAATAACTTT...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATAGTTTAATGAGTAACACAAGATACTaGTGCTGGCGATGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ELLQKAASNQQDQPNSLMSNTRY*CWRCLV
Trigger: CACCAAGCATCGCCAGCACCAGTATCTTGTGTTACT...CATTAAACTATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
3UTR CAA 72 bp AATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTaGGGCTGGCTCCGATTCCCTTGTTTTCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: NAVTKRKLLSVG*GWLRFPCFPDS
Trigger: GGAATCAGGAAAACAAGGGAATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 72 bp AATGGTCTCTTGCTGATAGAAGGCAAATTTCTAAGCTaGTCTCTTTGTAGCTACTGCTCAAGGGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: NGLLLIEGKFLS*SLCSYCSRGWQ
Trigger: TTGCCACCCCCTTGAGCAGTAGCTACAAAGAGACAAGCTTAGAAATTTGCCTTCTATCAGCAAGAGACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR TCA 90 bp TCAAACCAGCAAGATCAGCCCAATAGTTTAATGTTCATACCAACAATCAGAAACCTTCCAGTTCTCGGGTaGGTCGCTGAAACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SNQQDQPNSLMFIPTIRNLPVLG*VAETEA
Trigger: AGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAG...GTTTCTGATTGTTGGTATGAACATTAAACTATTGGGCTGATCTTGCTGGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR TCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTTGCTCTAGATGGAACTaGACTAACTCTTCTCATGGC +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFCSRWN*TNSSHG
Trigger: GCCATGAGAAGAGTTAGTTCAGTTCCATCTAGAGCA...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTAATTGCTCCATGTCATaGACAGTCCTTTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LINVILLLSELLHVMNSPNCSMS*TVLCSE
Trigger: TTCACTGCAAAGGACTGTTCATGACATGGAGCAATT...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR TCA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGAATTGCTCCATGTCATaGACAGTCCTTTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQNCSMS*TVLCSE
Trigger: TTCACTGCAAAGGACTGTTCATGACATGGAGCAATT...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR GCA 90 bp CTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATAGTTGCTACTTCAGAAAGCTaGTTCAAACCAGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: LLSYFRKLLQTSKISPIVATSES*FKPARS
Trigger: TGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGC...AACTATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTGGGTTTGACTTGCCATaGGCGTTAGTTCCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFGFDLP*ALVPSF
Trigger: AAAACTAGGAACTAACGCCCATGGCAAGTCAAACCC...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
3UTR CAA 72 bp GTTTGTCCTTCAGCTCTTGAATTCCTCACCACATGGTaGTTAGTTGATCCTATGAATGAATGCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VCPSALEFLTTW*LVDPMNECCCL
Trigger: CAGACAGCAGCATTCATTCATAGGATCAACTAACAACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR TCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGCTCTGTTGGGCATCTTaGTGCTACACCCATGAGTCT +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLLCWAS*CYTHES
Trigger: AGACTCATGGGTGTAGCATCAAGATGCCCAACAGAG...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGCAACACTTCTGGGTTTaGCTTGCCATGGGCGTTAGT +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLQHFWV*LAMGVS
Trigger: ACTAACGCCCATGGCAAGTCAAACCCAGAAGTGTTG...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGGTTGTGGAAACTCCCTaGTTCCTGGTATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLVVETP*FLVSTV
Trigger: GACAGTGGATACCAGGAAGCAGGGAGTTTCCACAAC...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGCAGCAGGTAATGTGGTaGAGGAATATGCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLQQVMW*RNMHWG
Trigger: ACCCCAGTGCATATTCCTCCACCACATTACCTGCTG...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR TCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGATGTCTGTTCTGGTaGATAGAGGGTTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLRCLFW*IEGSLF
Trigger: GAACAAGGAACCCTCTATTCACCAGAACAGACATCT...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR GCA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGCCGTTTTTGAAATGCTaGCTGTTACAGCATTACCCC +
Preference number: 4 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLPFLKC*LLQHYP
Trigger: GGGGTAATGCTGTAACAGGCAGCATTTCAAAAACGG...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTCATAGCTTAATTCTTTaGTGTGGTCCATCTCACAAA +
Preference number: 4 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFHSLIL*CGPSHK
Trigger: TTTGTGAGATGGACCACACCAAAGAATTAAGCTATG...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CCA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCTTAATTCTTTGGTGTaGTCCATCTCACAAAGTATA +
Preference number: 4 (lower is better)
Translates to: LLGLIGDPGELFSTQIWILNSLV*SISQSI
Trigger: TATACTTTGTGAGATGGACCACACCAAAGAATTAAG...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS GCA 90 bp CCGGCAGCGCGCGTCCCCCGCTGTACACACACACCTGACTACCGCTaGGCCCCGAGCGGCCACGGCCGCCGCGGCACCTCCACTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PAARVPRCTHTPDYR*APSGHGRRGTSTAR
Trigger: GCGGGCAGTGGAGGTGCCGCGGCGGCCGTGGCCGCTCGGGGCGCAGCGGTAGTCAGGTGTGTGTGTACAGCGGGGGACGCGCGCTGCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS TCA 90 bp AGCCCAGGAGCCGGCAGCGCGCGTCCCCCGCTGTACACACACACCTaGCTACCGCTGCGCCCCGAGCGGCCACGGCCGCCGCGGCACCTC +
Preference number: 5 (lower is better)
Translates to: SPGAGSARPPLYTHT*LPLRPERPRPPRHL
Trigger: GAGGTGCCGCGGCGGCCGTGGCCGCTCGGGGCGCAGCGGTAGTCAGGTGTGTGTGTACAGCGGGGGACGCGCGCTGCCGGCTCCTGGGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS GCA 90 bp CTACCGCTGCGCCCCGAGCGGCCACGGCCGCCGCGGCACCTCCACTaGCCGCGCTCGCGGTGTGTCGCACTCAGCCAACACGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LPLRPERPRPPRHLH*PRSRCVALSQHAAK
Trigger: TTTGGCTGCGTGTTGGCTGAGTGCGACACACCGCGAGCGCGGGCAGTGGAGGTGCCGCGGCGGCCGTGGCCGCTCGGGGCGCAGCGGTAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS GCA 90 bp CGGCAGCCTCGGCAGCGGGCGGGGATACCAGATCCGCCAGGGAGGTaGCGCAGCTCCGCTTCAACTCCTGGCAGGGAGAGGAGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: RQPRQRAGIPDPPGR*RSSASTPGRERRKR
Trigger: CCGCTTCCTCCTCTCCCTGCCAGGAGTTGAAGCGGAGCTGCGGCACCTCCCTGGCGGATCTGGTATCCCCGCCCGCTGCCGAGGCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS CCA 90 bp CAGCTCCGAAGATGCTCCGGTGACCTCTGGCTGCGCGGCGAGAGCTaGGGAGGGAAGGCGCTAGGGCAGCCGCGGCGGGCTGTGTGGACT +
Preference number: 5 (lower is better)
Translates to: QLRRCSGDLWLRGES*GGKALGQPRRAVWT
Trigger: AGTCCACACAGCCCGCCGCGGCTGCCCTAGCGCCTTCCCTCCCCAGCTCTCGCCGCGCAGCCAGAGGTCACCGGAGCATCTTCGGAGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000462335.1
ENST00000479398.5
CDS GCA 90 bp CGGCGGGCTGTGTGGACTCTGCCCCTGGTGCATTCCTCGCATTCCTaGACAATCTGTCGCCAGCCCAGGAGCCGGCAGCGCGCGTCCCCC +
Preference number: 5 (lower is better)
Translates to: RRAVWTLPLVHSSHS*TICRQPRSRQRASP
Trigger: GGGGGACGCGCGCTGCCGGCTCCTGGGCTGGCGACAGATTGTGCAGGAATGCGAGGAATGCACCAGGGGCAGAGTCCACACAGCCCGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS CCA 90 bp CAGGAGCTGGCATTCCTCCAGCTCCGAAGATGCTCCGGTGACCTCTaGCTGCGCGGCGAGAGCTGGGGAGGGAAGGCGCTAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: QELAFLQLRRCSGDL*LRGESWGGKALGQP
Trigger: CGGCTGCCCTAGCGCCTTCCCTCCCCAGCTCTCGCCGCGCAGCCAGAGGTCACCGGAGCATCTTCGGAGCTGGAGGAATGCCAGCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS CCA 90 bp TCGCTGAAACTGAAGCTCCAGCTCCGAAGATGCTCCGGTGACCTCTaGCTGCGCGGCGAGAGCTGGGGAGGGAAGGCGCTAGGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SLKLKLQLRRCSGDL*LRGESWGGKALGQP
Trigger: CGGCTGCCCTAGCGCCTTCCCTCCCCAGCTCTCGCCGCGCAGCCAGAGGTCACCGGAGCATCTTCGGAGCTGGAGCTTCAGTTTCAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462335.1
CDS-3UTR CAA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGGCGGCGGTGGCCAACTaGCCCCTCTACCCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTAAVAN*PLYPLP
Trigger: GGGCAAGGGGTAGAGGGGCAAGTTGGCCACCGCCGC...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS CCA 90 bp GCTGTGGTCTCGGGTTCCATGCCTGGGCCAGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCCTCCTCCACCAATGAGGCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: AVVSGSMPGPVEAAS*RVCGCPSSTNEACS
Trigger: TGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
ENST00000629219.1
CDS CCA 90 bp GAGAGCTGGGGAGGGAAGGCGCTAGGGCAGCCGCGGCGGGCTGTGTaGACTCTGCCCCTGGTGCATTCCTCGCATTCCTGCACAATCTGT +
Preference number: 5 (lower is better)
Translates to: ESWGGKALGQPRRAV*TLPLVHSSHSCTIC
Trigger: ACAGATTGTGCAGGAATGCGAGGAATGCACCAGGGGCAGAGTCCACACAGCCCGCCGCGGCTGCCCTAGCGCCTTCCCTCCCCAGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS-3UTR CAA 90 bp CGAGTCTGTGCATCCGTCAGGGTCAGTGGGGACCCCACTCTGGCGGTGGTTTGGCGACCCCACCTGGCCTaGGGATGGGGAAGCTACTCG +
Preference number: 5 (lower is better)
Translates to: RVCASVRVSGDPTLAVVWRPHLA*GWGSYS
Trigger: CGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCG...CCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCAGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 5 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS GCA 90 bp TCCATGCCTGGGCCAGTGGAGGCAGCTTCCTGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAGGCCTGCTCAGGAGCTGGCATTCCT +
Preference number: 5 (lower is better)
Translates to: SMPGPVEAASWRVCG*PSSTNEACSGAGIP
Trigger: AGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
CDS-3UTR CAA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCGGCGGTGGTTTGGTATaGAGGGGTTGGTCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPGGGLV*RGWSVG
Trigger: CCCAACGGACCAACCCCTCAATACCAAACCACCGCC...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS TCA 90 bp GGAGGCAGCTTCCTGGCGGGTCTGTGGTTGCCCCTCCTCCACCAATaGGGCCTGCTCAGGAGCTGGCATTCCTCCAGCTCCGAAGATGCT +
Preference number: 5 (lower is better)
Translates to: GGSFLAGLWLPLLHQ*GLLRSWHSSSSEDA
Trigger: AGCATCTTCGGAGCTGGAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS GCA 90 bp GCTTCCTGGCGGGTCTGTGGTTGCCCCTCCTCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCTCTTTCCAGCTTAGGCAGCGGCCGT +
Preference number: 5 (lower is better)
Translates to: ASWRVCGCPSSTNEA*SGAGIPLSSLGSGR
Trigger: ACGGCCGCTGCCTAAGCTGGAAAGAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
CDS TCA 90 bp GGAGGCAGCTTCCTGGCGGGTCTGTGGTTGCCCCTCCTCCACCAATaGGGCCTGCTCAGGAGCTGGCATTCCTCTTTCCAGCTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: GGSFLAGLWLPLLHQ*GLLRSWHSSFQLRQ
Trigger: CTGCCTAAGCTGGAAAGAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
CDS-3UTR CAA 90 bp CGAGGGTCTCTGATTCCTAACAGTGCTGGTGAGGAAGAGGTGCTGCCGACTGACTTGCCCCTCTACCCCTaGCCCATGGTGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: RGSLIPNSAGEEEVLPTDLPLYP*PMVPPP
Trigger: CGGAGGCGGCACCATGGGCAAGGGGTAGAGGGGCAA...GTCAGTCGGCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CAA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCTCACGTTCTGGCTGTaGTGGAAACTCCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDLTFWL*WKLPAS
Trigger: GGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACTCACGTTCTGGCTGTaGTGGAAACTCCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPLTFWL*WKLPAS
Trigger: GGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGCGACCCCACCTGGCCTaGGGATGGGGAAGCTACTCG +
Preference number: 5 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLRPHLA*GWGSYS
Trigger: CGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCG...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCCTCTTGCACTCGGTATaGTATAGGCCTGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPLLHSV*YRPVGL
Trigger: GAGCCCTACAGGCCTATACAATACCGAGTGCAAGAG...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGGAATGCTGCTGTCTGTaGTCTGCCTTGCTCACGTTC +
Preference number: 5 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTECCCL*SALLTF
Trigger: GAACGTGAGCAAGGCAGACAACAGACAGCAGCATTC...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp AGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTGGTTGGTCCGTTGGGATaGGAGGTCTGCCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RSNVQVGRHGRTKVLPKLVGPLG*EVCREV
Trigger: CACCTCCCGGCAGACCTCCAATCCCAACGGACCAAC...CAGCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGTTTGGTATTGAGGGGTaGGTCCGTTGGGATTGGAGG +
Preference number: 5 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTFGIEG*VRWDWR
Trigger: CCTCCAATCCCAACGGACCAACCCCTCAATACCAAA...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGCGCCGTCTGCGATCCTaGGAGCTCCACAGTTCCATG +
Preference number: 5 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLRRLRS*ELHSSM
Trigger: CATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCG...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACCTCTTGCACTCGGTATaGTATAGGCCTGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDLLHSV*YRPVGL
Trigger: GAGCCCTACAGGCCTATACAATACCGAGTGCAAGAG...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp TGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCACCTGGCCTTCCATCTTCACTTTGTaGTCACCAAAGCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: CGTAVIPERLGDDDPTWPSIFTL*SPKHRC
Trigger: GCACCTGTGCTTTGGTGACAACAAAGTGAAGATGGA...AGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS GCA 90 bp GCCCTTCTCAGTCCTGCTGAGGATTTGACTTCATGCCGACCGAAATaGTTGAGGCTCCGGCCCAGTGTTTCTCTTCAGGGCTGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: ALLSPAEDLTSCRPK*LRLRPSVSLQGCCR
Trigger: ACGGCAGCAGCCCTGAAGAGAAACACTGGGCCGGAGCCTCAAGCATTTCGGTCGGCATGAAGTCAAATCCTCAGCAGGACTGAGAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS-3UTR CAA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGTGGTGCTGGCGATGCTaGGTGATTCTGCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLWCWRC*VILLQA
Trigger: GGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCA...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000481115.2
CDS-3UTR CAA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCATGGTGCTGGCGATGCTaGGTGATTCTGCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSWCWRC*VILLQA
Trigger: GGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCA...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000426248.7
CDS-3UTR CAA 90 bp CCTTGCTCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTGTTGGTCCGTTGGGATaGGAGGTCTGCCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PCSRSGCCGNSLLPGIHCVGPLG*EVCREV
Trigger: CACCTCCCGGCAGACCTCCAATCCCAACGGACCAAC...ACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CAA 90 bp CCTACTGAACCTGTGCGATACAACGCCGTCTGCGATCCTTGGAGCTCCACAGTTGGCGGTGGTTTGGTATaGAGGGGTTGGTCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: PTEPVRYNAVCDPWSSTVGGGLV*RGWSVG
Trigger: CCCAACGGACCAACCCCTCAATACCAAACCACCGCC...AACTGTGGAGCTCCAAGGATCGCAGACGGCGTTGTATCGCACAGGTTCAGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000452162.5
CDS-3UTR CAA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTCGACCCCACCTGGCCTaGGGATGGGGAAGCTACTCG +
Preference number: 5 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTRPHLA*GWGSYS
Trigger: CGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCG...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGCGACCCCACCTGGCCTaGGGATGGGGAAGCTACTCG +
Preference number: 5 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKRPHLA*GWGSYS
Trigger: CGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCG...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTCAGGCTGCTGCTGTCCGAATaGCTCCATGTCATGAACAGT +
Preference number: 5 (lower is better)
Translates to: DPTWPWDGEATRVCASVRLLLSE*LHVMNS
Trigger: ACTGTTCATGACATGGAGCAATTCGGACAGCAGCAG...CCTGACGGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GACCCAATCCGCCGTATAGCTGTTGGGGAGGCGGGTCTCTGTGAGTACGGAGAGCTCTTGCACTCGGTATaGTATAGGCCTGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: DPIRRIAVGEAGLCEYGELLHSV*YRPVGL
Trigger: GAGCCCTACAGGCCTATACAATACCGAGTGCAAGAG...CTCTCCGTACTCACAGAGACCCGCCTCCCCAACAGCTATACGGCGGATTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACTCCATCTTCACTTTGTaGTCACCAAAGCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDSIFTL*SPKHRC
Trigger: GCACCTGTGCTTTGGTGACAACAAAGTGAAGATGGA...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp CGAGTCTGTGCATCCGTCAGGGTCAGTGGGGACCCCACTCTGGCGGTGGTTTGGGAAATGACTTCTCAGTaGAGCTGCTCCTTCACGGAT +
Preference number: 5 (lower is better)
Translates to: RVCASVRVSGDPTLAVVWEMTSQ*SCSFTD
Trigger: ATCCGTGAAGGAGCAGCTCAACTGAGAAGTCATTTC...CCAAACCACCGCCAGAGTGGGGTCCCCACTGACCCTGACGGATGCACAGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CAA 90 bp GAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACTGCTTACACCAGTATTaGGCACGTCTGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: EGPRCCGTAVIPERLGDDCLHQY*ARLLIS
Trigger: GGAGATCAACAGACGTGCCAAATACTGGTGTAAGCA...GTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTGTTGGTCCGTTGGGATaGGAGGTCTGCCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTVGPLG*EVCREV
Trigger: CACCTCCCGGCAGACCTCCAATCCCAACGGACCAAC...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 5 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 5 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTCGGAACGCCGTCTGCGATCCTaGGAGCTCCACAGTTCCATG +
Preference number: 5 (lower is better)
Translates to: LTFWLLWKLPASWYPLSERRLRS*ELHSSM
Trigger: CATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCG...TTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CAA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCATCCCATTGATCTTCTaGCGGAGTCCTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPIPLIF*RSPLFL
Trigger: AAGAAAAAGAGGACTCCGCAAGAAGATCAATGGGAT...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CAA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGTCTCGCATGGCGTATTaGCCTATGAGCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWSRMAY*PMSSLL
Trigger: CAACAAGGAGCTCATAGGCAAATACGCCATGCGAGA...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CAA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACATGTGTGGCATCCCCTaGGCTATTGTAATACTGCAT +
Preference number: 5 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDMCGIP*AIVILH
Trigger: ATGCAGTATTACAATAGCCAAGGGGATGCCACACAT...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CAA 90 bp CCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCATCAGAAACTCTAGGTTaGCTTACACCAGTATTTGGC +
Preference number: 5 (lower is better)
Translates to: PDAVVRRSSLSVWGTTTPSETLG*LTPVFG
Trigger: GCCAAATACTGGTGTAAGCAAACCTAGAGTTTCTGA...TGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GGCATCCCCTTGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTCGTTGGTCCGTTGGGATaGGAGGTCTGCCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GIPLAIVILHRWLGPIVFVGPLG*EVCREV
Trigger: CACCTCCCGGCAGACCTCCAATCCCAACGGACCAAC...GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CAA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGTTTGGTATTGAGGGGTaGGTCCGTTGGGATTGGAGG +
Preference number: 5 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLFGIEG*VRWDWR
Trigger: CCTCCAATCCCAACGGACCAACCCCTCAATACCAAA...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAGGCGGTGGTTTGGTATaGAGGGGTTGGTCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: RAPGLQILGTFMLALVFPGGGLV*RGWSVG
Trigger: CCCAACGGACCAACCCCTCAATACCAAACCACCGCC...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATCCACAGTTCCATGGTTaGGGCTGCGGTACACTGGGC +
Preference number: 5 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHPQFHG*GCGTLG
Trigger: GCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGG...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGCCACAGTTCCATGGTTaGGGCTGCGGTACACTGGGC +
Preference number: 5 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRPQFHG*GCGTLG
Trigger: GCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGG...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATCGCCGTCTGCGATCCTaGGAGCTCCACAGTTCCATG +
Preference number: 5 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHRRLRS*ELHSSM
Trigger: CATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCG...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACCCCGTTATAATTGCACTCTaGCACTCGGTATTGTATAGG +
Preference number: 5 (lower is better)
Translates to: PRCCGTAVIPERLGDDDPVIIAL*HSVLYR
Trigger: CCTATACAATACCGAGTGCAAGAGTGCAATTATAAC...GGGGTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCAGAAGGGCTCCCGGCTaGCAGATCTTAGGAACTTTC +
Preference number: 5 (lower is better)
Translates to: TARPEKASDFGPGVPHCLRRAPG*QILGTF
Trigger: GAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCTTCT...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS TCA 90 bp GTTTCTCTTCAGGGCTGCTGCCGTGCAGACTGCACCCATGATGCTTaGGCCTCACTTCTCACTACTGCAGATCCTTGGCGTGACAACAGA +
Preference number: 5 (lower is better)
Translates to: VSLQGCCRADCTHDA*ASLLTTADPWRDNR
Trigger: TCTGTTGTCACGCCAAGGATCTGCAGTAGTGAGAAGTGAGGCTCAAGCATCATGGGTGCAGTCTGCACGGCAGCAGCCCTGAAGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS-3UTR CAA 90 bp CAGTTGAGCTGGTGCTGGCGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTTGGTGCTGGCGATGCTaGGTGATTCTGCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: QLSWCWRCLVILLQAYIFWCWRC*VILLQA
Trigger: GGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCA...AAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CAA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGTATTTGGCACGTCTGTaGATCTCCAAGGAAATGACT +
Preference number: 5 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTYLARL*ISKEMT
Trigger: AGTCATTTCCTTGGAGATCAACAGACGTGCCAAATA...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCTCAGAAACTCTAGGTTaGCTTACACCAGTATTTGGC +
Preference number: 5 (lower is better)
Translates to: DDDPTWPWDGEATRVCASSETLG*LTPVFG
Trigger: GCCAAATACTGGTGTAAGCAAACCTAGAGTTTCTGA...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGACTTCCTCACCACATGGTaGTTAGTTGATCCTATGAAT +
Preference number: 5 (lower is better)
Translates to: GPRCCGTAVIPERLGDDDFLTTW*LVDPMN
Trigger: ATTCATAGGATCAACTAACAACCATGTGGTGAGGAA...GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GGGACCCCACTCTGGCGGTGGTTTGGTATTGAGGGGTTGGTCCGTTGGGATTGGTTTGTCCTTCAGCTCTaGAATTCCTCACCACATGGT +
Preference number: 5 (lower is better)
Translates to: GTPLWRWFGIEGLVRWDWFVLQL*NSSPHG
Trigger: ACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAAA...CCAATCCCAACGGACCAACCCCTCAATACCAAACCACCGCCAGAGTGGGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAGGCGGTGGTTTGGTATaGAGGGGTTGGTCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPGGGLV*RGWSVG
Trigger: CCCAACGGACCAACCCCTCAATACCAAACCACCGCC...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGATGGCGGTGGTTTGGTATaGAGGGGTTGGTCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: AVRIAPCHEQSFAVKVPDGGGLV*RGWSVG
Trigger: CCCAACGGACCAACCCCTCAATACCAAACCACCGCC...ATCTGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACACACTCTGGCGGTGGTTaGGTATTGAGGGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTHSGGG*VLRGWS
Trigger: GGACCAACCCCTCAATACCAAACCACCGCCAGAGTG...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCACACTCTGGCGGTGGTTaGGTATTGAGGGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPHSGGG*VLRGWS
Trigger: GGACCAACCCCTCAATACCAAACCACCGCCAGAGTG...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp ATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCGGCAGAACGAAGGTCTaGCCCAAGCTGACTATGCTG +
Preference number: 5 (lower is better)
Translates to: IGVMCKSGDTAERRSCPSGRTKV*PKLTML
Trigger: CAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCC...GCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCGCCGTCTGCGATCCTaGGAGCTCCACAGTTCCATG +
Preference number: 5 (lower is better)
Translates to: PGWNHPLINVILLLSELLRRLRS*ELHSSM
Trigger: CATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCG...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCTCCATCTTCACTTTGTaGTCACCAAAGCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVSIFTL*SPKHRC
Trigger: GCACCTGTGCTTTGGTGACAACAAAGTGAAGATGGA...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp AGGAACTCCGTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAGGTCAACCAGATGCTaGATTCCCCCTAACCTACAC +
Preference number: 5 (lower is better)
Translates to: RNSVSLSGCLAWVEPSSHRSTRC*IPPNLH
Trigger: GTGTAGGTTAGGGGGAATCAAGCATCTGGTTGACCT...ATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTACGGAGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGAAGACACTGGGGCCATaGCCGCCGGGGAGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQKTLGP*PPGSRL
Trigger: CAACCGGCTCCCCGGCGGCAATGGCCCCAGTGTCTT...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS CCA 90 bp TGCAGACGCACAAGTATCCTGCATGTTCCGATTCTGACTGGCACCTaGAGCGGCTCTACATGCCAGTCATCCCAATGTACTCAGGGATGT +
Preference number: 5 (lower is better)
Translates to: CRRTSILHVPILTGT*SGSTCQSSQCTQGC
Trigger: ACATCCCTGAGTACATTGGGATGACTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGTGCGTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CAA 90 bp GGGGTGGCAACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGTGGTGCTGGCGATGCTaGGTGATTCTGCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: GVATVELLQKAASNQQDQWCWRC*VILLQA
Trigger: GGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCA...CTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGTTGCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CAA 90 bp AGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACTATTTGGCACGTCTGTaGATCTCCAAGGAAATGACT +
Preference number: 5 (lower is better)
Translates to: SEGPRCCGTAVIPERLGDYLARL*ISKEMT
Trigger: AGTCATTTCCTTGGAGATCAACAGACGTGCCAAATA...GTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCTTTGTGTTGAACTTCTaGAGTTACCCAATGATCCCT +
Preference number: 5 (lower is better)
Translates to: DDDPTWPWDGEATRVCASFVLNF*SYPMIP
Trigger: AGGGATCATTGGGTAACTCAAGAAGTTCAACACAAA...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTCTCACGTTCTGGCTGTaGTGGAAACTCCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTLTFWL*WKLPAS
Trigger: GGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCTTTGTCCTTCAGCTCTaGAATTCCTCACCACATGGT +
Preference number: 5 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVFVLQL*NSSPHG
Trigger: ACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAAA...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp TATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCACACTCTGGCGGTGGTTaGGTATTGAGGGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: YIGVMCKSGDTAERRSCPHSGGG*VLRGWS
Trigger: GGACCAACCCCTCAATACCAAACCACCGCCAGAGTG...TGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATCGACCCCACCTGGCCTaGGGATGGGGAAGCTACTCG +
Preference number: 5 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDRPHLA*GWGSYS
Trigger: CGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCG...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 5 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CCTCCCCTCATATATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGGCAGAACGAAGGTCTaGCCCAAGCTGACTATGCTG +
Preference number: 5 (lower is better)
Translates to: PPLIYRSNVQVGRHGRTKGRTKV*PKLTML
Trigger: CAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCC...CTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTATATATGAGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGCCACAGTTCCATGGTTaGGGCTGCGGTACACTGGGC +
Preference number: 5 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKPQFHG*GCGTLG
Trigger: GCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGG...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp ATTTCACTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGCGCCGTCTGCGATCCTaGGAGCTCCACAGTTCCATG +
Preference number: 5 (lower is better)
Translates to: ISLWMLILGCCPFGKKTQRRLRS*ELHSSM
Trigger: CATGGAACTGTGGAGCTCCAAGGATCGCAGACGGCG...CTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAGTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GACGACGACCCCACCTGGCCTTGGGATGGGGAAGCTACTCGAGTCTGTGCATCCGTTATAATTGCACTCTaGCACTCGGTATTGTATAGG +
Preference number: 5 (lower is better)
Translates to: DDDPTWPWDGEATRVCASVIIAL*HSVLYR
Trigger: CCTATACAATACCGAGTGCAAGAGTGCAATTATAAC...GGATGCACAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp AAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGGGGACGACGGAACAATCACAGTGTTaGTTAAGGTTGAGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: KVPDAVVRRSSLSVWGTTEQSQC*LRLREH
Trigger: ATGCTCTCTCAACCTTAACAAACACTGTGATTGTTC...CGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTAAGACACTGGGGCCATaGCCGCCGGGGAGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFKTLGP*PPGSRL
Trigger: CAACCGGCTCCCCGGCGGCAATGGCCCCAGTGTCTT...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGGAAAGAGTTCCTCTGTaGGGCATCTTGATGCTACAC +
Preference number: 5 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLERVPL*GILMLH
Trigger: GTGTAGCATCAAGATGCCCAACAGAGGAACTCTTTC...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CAA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCACTTTGGATGCTCATCTaGGGCTGCTGTCCATTCGGC +
Preference number: 5 (lower is better)
Translates to: RAPGLQILGTFMLALVFPLWMLI*GCCPFG
Trigger: GCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS TCA 90 bp CTAGCTGACTGGCAACAATCTGCCTTTCCACTTCCAGTTCTCGGGTaGGTCGCTGAAACTGAAGCTCCTGCTCCTTCACGGATGCTAGAA +
Preference number: 5 (lower is better)
Translates to: LADWQQSAFPLPVLG*VAETEAPAPSRMLE
Trigger: TTCTAGCATCCGTGAAGGAGCAGGAGCTTCAGTTTCAGCGACTCACCCGAGAACTGGAAGTGGAAAGGCAGATTGTTGCCAGTCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000421462.5
ENST00000426248.7
ENST00000628904.2
CDS TCA 90 bp ACTGAAGCTCTTGCAGACGCACAAGTATCCTGCATGTTCCGATTCTaGCTGGCACCTGGAGCGGCTCTACATGCCAGTCATCCCAATGTA +
Preference number: 5 (lower is better)
Translates to: TEALADAQVSCMFRF*LAPGAALHASHPNV
Trigger: TACATTGGGATGACTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGTGCGTCTGCAAGAGCTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS GCA 90 bp ATCCTGCATGTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACATaGCAGTCATCCCAATGTACTCAGGGATGTAAACACCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: ILHVPILTGTWSGST*QSSQCTQGCKHLLL
Trigger: AAGGAGCAGGTGTTTACATCCCTGAGTACATTGGGATGACTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS CCA 90 bp AAGCTCTTGCAGACGCACAAGTATCCTGCATGTTCCGATTCTGACTaGCACCTGGAGCGGCTCTACATGCCAGTCATCCCAATGTACTCA +
Preference number: 5 (lower is better)
Translates to: KLLQTHKYPACSDSD*HLERLYMPVIPMYS
Trigger: TGAGTACATTGGGATGACTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGTGCGTCTGCAAGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CAA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCTGGTGCTGGCGATGCTaGGTGATTCTGCTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTWCWRC*VILLQA
Trigger: GGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCA...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GCAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCTATTTGGCACGTCTGTaGATCTCCAAGGAAATGACT +
Preference number: 5 (lower is better)
Translates to: AGNVVEEYALGFRGRGSVYLARL*ISKEMT
Trigger: AGTCATTTCCTTGGAGATCAACAGACGTGCCAAATA...GACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp GCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCCAGAATGCTGCTGTCTGTaGTCTGCCTTGCTCACGTTC +
Preference number: 5 (lower is better)
Translates to: AAVRIAPCHEQSFAVKVPECCCL*SALLTF
Trigger: GAACGTGAGCAAGGCAGACAACAGACAGCAGCATTC...TGGGACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATTTTGGTATTGAGGGGTaGGTCCGTTGGGATTGGAGG +
Preference number: 5 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHFGIEG*VRWDWR
Trigger: CCTCCAATCCCAACGGACCAACCCCTCAATACCAAA...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGCACTCTGGCGGTGGTTaGGTATTGAGGGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKHSGGG*VLRGWS
Trigger: GGACCAACCCCTCAATACCAAACCACCGCCAGAGTG...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp ATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCCTGCTGCTGTCCGAATaGCTCCATGTCATGAACAGT +
Preference number: 5 (lower is better)
Translates to: IGVMCKSGDTAERRSCPSLLLSE*LHVMNS
Trigger: ACTGTTCATGACATGGAGCAATTCGGACAGCAGCAG...GCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTCACGTTCTGGCTGTTGTGGAAACTCCCTGCTTCCTGGTATCCACTGTCGGAAAGGTCAACCAGATGCTaGATTCCCCCTAACCTACAC +
Preference number: 5 (lower is better)
Translates to: LTFWLLWKLPASWYPLSERSTRC*IPPNLH
Trigger: GTGTAGGTTAGGGGGAATCAAGCATCTGGTTGACCT...TTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CAA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCATTATTGTCAGTTGGCTaGGGCTGGCTCCGATTCCCT +
Preference number: 5 (lower is better)
Translates to: RAPGLQILGTFMLALVFPLLSVG*GWLRFP
Trigger: AGGGAATCGGAGCCAGCCCAAGCCAACTGACAATAA...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS GCA 90 bp AACAATCCCCAAAGTAGGAAAGGGAATGACTGGAACATGGTTTGCTaGTGGGGGACTGTCTCAATACAAGCACAGGCTACTTCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: NNPQSRKGNDWNMVC*WGTVSIQAQATSQA
Trigger: GGCCTGGGAAGTAGCCTGTGCTTGTATTGAGACAGTCCCCCAGCAGCAAACCATGTTCCAGTCATTCCCTTTCCTACTTTGGGGATTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS GCA 90 bp GGCAACAATCCCCAAAGTAGGAAAGGGAATGACTGGAACATGGTTTaGTGCTGGGGGACTGTCTCAATACAAGCACAGGCTACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GNNPQSRKGNDWNMV*CWGTVSIQAQATSQ
Trigger: CTGGGAAGTAGCCTGTGCTTGTATTGAGACAGTCCCCCAGCAGCAAACCATGTTCCAGTCATTCCCTTTCCTACTTTGGGGATTGTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CCA 90 bp AATCCCCAAAGTAGGAAAGGGAATGACTGGAACATGGTTTGCTGCTaGGGGACTGTCTCAATACAAGCACAGGCTACTTCCCAGGCCACT +
Preference number: 5 (lower is better)
Translates to: NPQSRKGNDWNMVCC*GTVSIQAQATSQAT
Trigger: AGTGGCCTGGGAAGTAGCCTGTGCTTGTATTGAGACAGTCCCCCAGCAGCAAACCATGTTCCAGTCATTCCCTTTCCTACTTTGGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS-3UTR CAA 90 bp CTTTGCAGTGAAGGTCCCAGATGCTGTGGTACGGCGGTCATCCCTGAGCGTTTGTCAGAAACTCTAGGTTaGCTTACACCAGTATTTGGC +
Preference number: 5 (lower is better)
Translates to: LCSEGPRCCGTAVIPERLSETLG*LTPVFG
Trigger: GCCAAATACTGGTGTAAGCAAACCTAGAGTTTCTGA...CAAACGCTCAGGGATGACCGCCGTACCACAGCATCTGGGACCTTCACTGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGCTCACGTTCTGGCTGTaGTGGAAACTCCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKLTFWL*WKLPAS
Trigger: GGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCGAATGCTGCTGTCTGTaGTCTGCCTTGCTCACGTTC +
Preference number: 5 (lower is better)
Translates to: PGWNHPLINVILLLSELLECCCL*SALLTF
Trigger: GAACGTGAGCAAGGCAGACAACAGACAGCAGCATTC...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCGTTGGTCCGTTGGGATaGGAGGTCTGCCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIVGPLG*EVCREV
Trigger: CACCTCCCGGCAGACCTCCAATCCCAACGGACCAAC...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp TGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGAGTTCTGTCATCCCTGAGCGTTaGGGGGACGACGACCCCACC +
Preference number: 5 (lower is better)
Translates to: WCQPNKCPTTVLMKLLSSVIPER*GDDDPT
Trigger: GGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGAC...AGAACTCAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACACTGCTGCTGTCCGAATaGCTCCATGTCATGAACAGT +
Preference number: 5 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTLLLSE*LHVMNS
Trigger: ACTGTTCATGACATGGAGCAATTCGGACAGCAGCAG...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGGCAGAACGAAGGTCTaGCCCAAGCTGACTATGCTG +
Preference number: 5 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKGRTKV*PKLTML
Trigger: CAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCC...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp TCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGCCACAGTTCCATGGTTaGGGCTGCGGTACACTGGGC +
Preference number: 5 (lower is better)
Translates to: SSHKCHTAAVRIAPCHEQPQFHG*GCGTLG
Trigger: GCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGG...CTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGAGGTCAACCAGATGCTaGATTCCCCCTAACCTACAC +
Preference number: 5 (lower is better)
Translates to: CQAVWPGWNHPLINVILLRSTRC*IPPNLH
Trigger: GTGTAGGTTAGGGGGAATCAAGCATCTGGTTGACCT...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp ACTGCAAGACCTGAGAAGGCCTCAGACTTTGGGCCTGGTGTCCCTCATTGCCTCACTAAAAGAAAGTTATaGTCAGTTGGCTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TARPEKASDFGPGVPHCLTKRKL*SVGLGW
Trigger: CCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGT...GAGGCAATGAGGGACACCAGGCCCAAAGTCTGAGGCCTTCTCAGGTCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp ATGGTTTGGGCTGCGGTACACTGGGCTGTAATAGGTCCTCCCCTCATATATAGGTGCTTACACCAGTATTaGGCACGTCTGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: MVWAAVHWAVIGPPLIYRCLHQY*ARLLIS
Trigger: GGAGATCAACAGACGTGCCAAATACTGGTGTAAGCA...CCTATATATGAGGGGAGGACCTATTACAGCCCAGTGTACCGCAGCCCAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCATTTGTGTTGAACTTCTaGAGTTACCCAATGATCCCT +
Preference number: 5 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSFVLNF*SYPMIP
Trigger: AGGGATCATTGGGTAACTCAAGAAGTTCAACACAAA...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCATTCCTCACCACATGGTaGTTAGTTGATCCTATGAAT +
Preference number: 5 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSFLTTW*LVDPMN
Trigger: ATTCATAGGATCAACTAACAACCATGTGGTGAGGAA...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp ATAGGAGTAATGTGCAAGTCGGGAGACACGGCAGAACGAAGGTCTTGCCCAAGCTTTGTCCTTCAGCTCTaGAATTCCTCACCACATGGT +
Preference number: 5 (lower is better)
Translates to: IGVMCKSGDTAERRSCPSFVLQL*NSSPHG
Trigger: ACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAAA...GCTTGGGCAAGACCTTCGTTCTGCCGTGTCTCCCGACTTGCACATTACTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp ACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCCTGCTGCTGTCCGAATaGCTCCATGTCATGAACAGT +
Preference number: 5 (lower is better)
Translates to: TAAVRIAPCHEQSFAVKVLLLSE*LHVMNS
Trigger: ACTGTTCATGACATGGAGCAATTCGGACAGCAGCAG...GACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCCACAGTTCCATGGTTaGGGCTGCGGTACACTGGGC +
Preference number: 5 (lower is better)
Translates to: LLGLIGDPGELFSTQIWIPQFHG*GCGTLG
Trigger: GCCCAGTGTACCGCAGCCCAAACCATGGAACTGTGG...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCACTGTTATAATTGCACTCTaGCACTCGGTATTGTATAGG +
Preference number: 5 (lower is better)
Translates to: GNVVEEYALGFRGRGSVTVIIAL*HSVLYR
Trigger: CCTATACAATACCGAGTGCAAGAGTGCAATTATAAC...AGTGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp CAGGTAATGTGGTGGAGGAATATGCACTGGGGTTCAGAGGTCGGGGGTCGGTCAGAACAATCACAGTGTTaGTTAAGGTTGAGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: QVMWWRNMHWGSEVGGRSEQSQC*LRLREH
Trigger: ATGCTCTCTCAACCTTAACAAACACTGTGATTGTTC...TGACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCACCACATTACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp AGAAGTCCTGATGCCAGTTCCTCAGGAACATCTGGCGACCTCTGCCATCTAACAGAAAGAGTTCCTCTGTaGGGCATCTTGATGCTACAC +
Preference number: 5 (lower is better)
Translates to: RSPDASSSGTSGDLCHLTERVPL*GILMLH
Trigger: GTGTAGCATCAAGATGCCCAACAGAGGAACTCTTTC...TGTTAGATGGCAGAGGTCGCCAGATGTTCCTGAGGAACTGGCATCAGGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTACTTCTGGGTTTGACTaGCCATGGGCGTTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCTSGFD*PWALVP
Trigger: AGGAACTAACGCCCATGGCAAGTCAAACCCAGAAGT...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS GCA 90 bp CTGTTCTCACGGTTCTCAGGATATTTTCTTAAGTTGCCACGTCCTTaGCCCTGTAACTTTGGAGACTTGCCCTTTGATCTGGAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: LFSRFSGYFLKLPRP*PCNFGDLPFDLESG
Trigger: GCCACTCTCCAGATCAAAGGGCAAGTCTCCAAAGTTACAGGGGCAAGGACGTGGCAACTTAAGAAAATATCCTGAGAACCGTGAGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492496.1
CDS-3UTR CAA 90 bp GAGCTGGTGCTGGCGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTCTAGCTATTTGGCACGTCTGTaGATCTCCAAGGAAATGACT +
Preference number: 5 (lower is better)
Translates to: ELVLAMLGDSAPSLHLSSYLARL*ISKEMT
Trigger: AGTCATTTCCTTGGAGATCAACAGACGTGCCAAATA...GCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CAA 90 bp GGCATCCCCTTGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTCTGCTTACACCAGTATTaGGCACGTCTGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: GIPLAIVILHRWLGPIVFCLHQY*ARLLIS
Trigger: GGAGATCAACAGACGTGCCAAATACTGGTGTAAGCA...GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426248.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCTGCTTACACCAGTATTaGGCACGTCTGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: PGWNHPLINVILLLSELLCLHQY*ARLLIS
Trigger: GGAGATCAACAGACGTGCCAAATACTGGTGTAAGCA...GAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTTTTGTCCTTCAGCTCTaGAATTCCTCACCACATGGT +
Preference number: 5 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTFVLQL*NSSPHG
Trigger: ACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAAA...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CATCCTCTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACGGCAGAACGAAGGTCTaGCCCAAGCTGACTATGCTG +
Preference number: 5 (lower is better)
Translates to: HPLINVILLLSELLHVMNGRTKV*PKLTML
Trigger: CAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCC...GTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCAGGTCAACCAGATGCTaGATTCCCCCTAACCTACAC +
Preference number: 5 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTRSTRC*IPPNLH
Trigger: GTGTAGGTTAGGGGGAATCAAGCATCTGGTTGACCT...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GAGTCGCTGAAACTGAAGCTCTTGCAGACGCACAAGTATCCTGCATGTTCCGATCTGAAACTGAAGCTCTaGCAGACGCACAAGTATCCT +
Preference number: 5 (lower is better)
Translates to: ESLKLKLLQTHKYPACSDLKLKL*QTHKYP
Trigger: AGGATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAG...ATCGGAACATGCAGGATACTTGTGCGTCTGCAAGAGCTTCAGTTTCAGCGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS GCA 90 bp ACCAAGCCACTCTGTTCTCACGGTTCTCAGGATATTTTCTTAAGTTaGCACGTCCTTGCCCCTGTAACTTTGGAGACTTGCCCTTTGATC +
Preference number: 5 (lower is better)
Translates to: TKPLCSHGSQDIFLS*HVLAPVTLETCPLI
Trigger: GATCAAAGGGCAAGTCTCCAAAGTTACAGGGGCAAGGACGTGGCAACTTAAGAAAATATCCTGAGAACCGTGAGAACAGAGTGGCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492496.1
CDS-3UTR CAA 90 bp CACGGCAGAACGAAGGTCTTGCCCAAGCTGACTATGCTGACTAGCATAGGAACTTATTTGGCACGTCTGTaGATCTCCAAGGAAATGACT +
Preference number: 5 (lower is better)
Translates to: HGRTKVLPKLTMLTSIGTYLARL*ISKEMT
Trigger: AGTCATTTCCTTGGAGATCAACAGACGTGCCAAATA...AGTTCCTATGCTAGTCAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CGATGCTTGGTGATTCTGCTCCAAGCCTACATCTTTCTAGCTGACTGGCAACAATGCTTACACCAGTATTaGGCACGTCTGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: RCLVILLQAYIFLADWQQCLHQY*ARLLIS
Trigger: GGAGATCAACAGACGTGCCAAATACTGGTGTAAGCA...TTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS-3UTR CAA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTCTCACGTTCTGGCTGTaGTGGAAACTCCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFLTFWL*WKLPAS
Trigger: GGAAGCAGGGAGTTTCCACAACAGCCAGAACGTGAG...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATGAATGCTGCTGTCTGTaGTCTGCCTTGCTCACGTTC +
Preference number: 5 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDECCCL*SALLTF
Trigger: GAACGTGAGCAAGGCAGACAACAGACAGCAGCATTC...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTCATAAATGTCATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTGAATGCTGCTGTCTGTaGTCTGCCTTGCTCACGTTC +
Preference number: 5 (lower is better)
Translates to: LINVILLLSELLHVMNSPECCCL*SALLTF
Trigger: GAACGTGAGCAAGGCAGACAACAGACAGCAGCATTC...AGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATGACATTTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATTTTGGTATTGAGGGGTaGGTCCGTTGGGATTGGAGG +
Preference number: 5 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDFGIEG*VRWDWR
Trigger: CCTCCAATCCCAACGGACCAACCCCTCAATACCAAA...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTGGCAGAACGAAGGTCTaGCCCAAGCTGACTATGCTG +
Preference number: 5 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFGRTKV*PKLTML
Trigger: CAGCATAGTCAGCTTGGGCAAGACCTTCGTTCTGCC...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATCTCTTGCACTCGGTATaGTATAGGCCTGTAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDLLHSV*YRPVGL
Trigger: GAGCCCTACAGGCCTATACAATACCGAGTGCAAGAG...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTGCCTGGTGTCCCTCATaGCCTCCACAGATGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFAWCPS*PPQMEK
Trigger: TTTCTCCATCTGTGGAGGCAATGAGGGACACCAGGC...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp ACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGGTCTCAGAAACTCTAGGTTaGCTTACACCAGTATTTGGC +
Preference number: 5 (lower is better)
Translates to: TAAVRIAPCHEQSFAVKVSETLG*LTPVFG
Trigger: GCCAAATACTGGTGTAAGCAAACCTAGAGTTTCTGA...GACCTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATTTTGTGTTGAACTTCTaGAGTTACCCAATGATCCCT +
Preference number: 5 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHFVLNF*SYPMIP
Trigger: AGGGATCATTGGGTAACTCAAGAAGTTCAACACAAA...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp TGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATACTGCTGTTTGTGTTGAACTTCTaGAGTTACCCAATGATCCCT +
Preference number: 5 (lower is better)
Translates to: CQAVWPGWNHPLINVILLFVLNF*SYPMIP
Trigger: AGGGATCATTGGGTAACTCAAGAAGTTCAACACAAA...CAGCAGTATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCTTTGTCCTTCAGCTCTaGAATTCCTCACCACATGGT +
Preference number: 5 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTFVLQL*NSSPHG
Trigger: ACCATGTGGTGAGGAATTCAAGAGCTGAAGGACAAA...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GTAAGCCTGTCAGGCTGTCTGGCCTGGGTGGAACCATCCTCTCATAAATGTCATGAACAATCACAGTGTTaGTTAAGGTTGAGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: VSLSGCLAWVEPSSHKCHEQSQC*LRLREH
Trigger: ATGCTCTCTCAACCTTAACAAACACTGTGATTGTTC...ATGACATTTATGAGAGGATGGTTCCACCCAGGCCAGACAGCCTGACAGGCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
CDS-3UTR CAA 90 bp AGGGCTCCCGGCTTGCAGATCTTAGGAACTTTCATGCTCGCACTGGTATTTCCAAATTTGGATCCGTTTTaGAAATGCTGCCTGTTACAG +
Preference number: 5 (lower is better)
Translates to: RAPGLQILGTFMLALVFPNLDPF*KCCLLQ
Trigger: CTGTAACAGGCAGCATTTCAAAAACGGATCCAAATT...TGGAAATACCAGTGCGAGCATGAAAGTTCCTAAGATCTGCAAGCCGGGAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS GCA 90 bp AGAATTATGATTCTAGAGTGTTTGTGGAATACCCAGATGACAGGATaGAGAGCCCTTCTCAGTCCTGCTGAGGATTTGACTTCATGCCGA +
Preference number: 5 (lower is better)
Translates to: RIMILECLWNTQMTG*RALLSPAEDLTSCR
Trigger: TCGGCATGAAGTCAAATCCTCAGCAGGACTGAGAAGGGCTCTGCATCCTGTCATCTGGGTATTCCACAAACACTCTAGAATCATAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS-3UTR CAA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATTGCTTACACCAGTATTaGGCACGTCTGTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDCLHQY*ARLLIS
Trigger: GGAGATCAACAGACGTGCCAAATACTGGTGTAAGCA...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTTTGGATGCTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTTCAGAAACTCTAGGTTaGCTTACACCAGTATTTGGC +
Preference number: 5 (lower is better)
Translates to: LWMLILGCCPFGKKTQFSSETLG*LTPVFG
Trigger: GCCAAATACTGGTGTAAGCAAACCTAGAGTTTCTGA...AGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAGCATCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp ATCCACTGTCGGAATAAGAATTCATTTGTGTTGAACTTCTTGAGTTACCCAATGCACTCTGGCGGTGGTTaGGTATTGAGGGGTTGGTCC +
Preference number: 5 (lower is better)
Translates to: IHCRNKNSFVLNFLSYPMHSGGG*VLRGWS
Trigger: GGACCAACCCCTCAATACCAAACCACCGCCAGAGTG...CATTGGGTAACTCAAGAAGTTCAACACAAATGAATTCTTATTCCGACAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452162.5
CDS-3UTR CAA 90 bp CTGTTAGGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCTCTCGCATGGCGTATTaGCCTATGAGCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LLGLIGDPGELFSTQIWISRMAY*PMSSLL
Trigger: CAACAAGGAGCTCATAGGCAAATACGCCATGCGAGA...GATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACCTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCTTTGTGTTGAACTTCTaGAGTTACCCAATGATCCCT +
Preference number: 5 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTFVLNF*SYPMIP
Trigger: AGGGATCATTGGGTAACTCAAGAAGTTCAACACAAA...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CATACTGCTGCTGTCCGAATTGCTCCATGTCATGAACAGTCCTTTGCAGTGAAGTTCCTCACCACATGGTaGTTAGTTGATCCTATGAAT +
Preference number: 5 (lower is better)
Translates to: HTAAVRIAPCHEQSFAVKFLTTW*LVDPMN
Trigger: ATTCATAGGATCAACTAACAACCATGTGGTGAGGAA...CTTCACTGCAAAGGACTGTTCATGACATGGAGCAATTCGGACAGCAGCAGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000481115.2
CDS-3UTR CAA 90 bp GTTTTCCTGATTCCCCAACTGAGCCTTCAGCTTCAACCCAGATCTGAAGATACCGTTATAATTGCACTCTaGCACTCGGTATTGTATAGG +
Preference number: 5 (lower is better)
Translates to: VFLIPQLSLQLQPRSEDTVIIAL*HSVLYR
Trigger: CCTATACAATACCGAGTGCAAGAGTGCAATTATAAC...GGTATCTTCAGATCTGGGTTGAAGCTGAAGGCTCAGTTGGGGAATCAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTTCCATCTTCACTTTGTaGTCACCAAAGCACAGGTGC +
Preference number: 5 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFSIFTL*SPKHRC
Trigger: GCACCTGTGCTTTGGTGACAACAAAGTGAAGATGGA...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTCATCTTGGGCTGCTGTCCATTCGGCAAGAAAACGCAGTTTTCTCTTGGGTGTGTTTTAATCTGCGATTaGTATTACACTTGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LILGCCPFGKKTQFSLGCVLICD*YYTCRV
Trigger: TACCCTGCAAGTGTAATACAAATCGCAGATTAAAAC...ACACCCAAGAGAAAACTGCGTTTTCTTGCCGAATGGACAGCAGCCCAAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CTAATGCAGTCACTAAAAGAAAGTTATTGTCAGTTGGCTTGGGCTGGCTCCGATATCCCATTGATCTTCTaGCGGAGTCCTCTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: LMQSLKESYCQLAWAGSDIPLIF*RSPLFL
Trigger: AAGAAAAAGAGGACTCCGCAAGAAGATCAATGGGAT...ATCGGAGCCAGCCCAAGCCAACTGACAATAACTTTCTTTTAGTGACTGCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp ACTGTTGAGCTACTTCAGAAAGCTGCTTCAAACCAGCAAGATCAGCCCAATAGTACGCACAATGGTCTCTaGCTGATAGAAGGCAAATTT +
Preference number: 5 (lower is better)
Translates to: TVELLQKAASNQQDQPNSTHNGL*LIEGKF
Trigger: AAATTTGCCTTCTATCAGCAAGAGACCATTGTGCGT...ACTATTGGGCTGATCTTGCTGGTTTGAAGCAGCTTTCTGAAGTAGCTCAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS-3UTR CAA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTTATTTGGCACGTCTGTaGATCTCCAAGGAAATGACT +
Preference number: 5 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFYLARL*ISKEMT
Trigger: AGTCATTTCCTTGGAGATCAACAGACGTGCCAAATA...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp GGTCTGATTGGAGACCCAGGTGAGTTATTTTCAACCCAAATTTGGATCCGTTTTTATTTCCATTTCACTTaGGATGCTCATCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GLIGDPGELFSTQIWIRFYFHFT*DAHLGL
Trigger: CAGCCCAAGATGAGCATCCAAAGTGAAATGGAAATA...AAAACGGATCCAAATTTGGGTTGAAAATAACTCACCTGGGTCTCCAATCAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp CAGCAAGATCAGCCCAATAGTTTAATGTTCATACCAACAATCAGAAACAACAGAGGCAAATTTCTAAGCTaGTCTCTTTGTAGCTACTGC +
Preference number: 5 (lower is better)
Translates to: QQDQPNSLMFIPTIRNNRGKFLS*SLCSYC
Trigger: GCAGTAGCTACAAAGAGACAAGCTTAGAAATTTGCC...TCTGTTGTTTCTGATTGTTGGTATGAACATTAAACTATTGGGCTGATCTTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS CCA 90 bp TGGACCAAGTCAGGCTGCCAAACAATACTTTTCGTTAGATCTTTCTaGATCTTAATGTATGAACTGGGTACAGTTACACATTTTTGTGTA +
Preference number: 5 (lower is better)
Translates to: WTKSGCQTILFVRSF*ILMYELGTVTHFCV
Trigger: TACACAAAAATGTGTAACTGTACCCAGTTCATACATTAAGATCCAGAAAGATCTAACGAAAAGTATTGTTTGGCAGCCTGACTTGGTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486254.3
ENST00000495123.5
CDS-3UTR CAA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGTTCCTCACCACATGGTaGTTAGTTGATCCTATGAAT +
Preference number: 5 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLFLTTW*LVDPMN
Trigger: ATTCATAGGATCAACTAACAACCATGTGGTGAGGAA...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS-3UTR CAA 90 bp TTATATTGGTGCCAACCAAATAAATGCCCAACCACTGTTCTTATGAAGTTACTGGAACAATCACAGTGTTaGTTAAGGTTGAGAGAGCAT +
Preference number: 5 (lower is better)
Translates to: LYWCQPNKCPTTVLMKLLEQSQC*LRLREH
Trigger: ATGCTCTCTCAACCTTAACAAACACTGTGATTGTTC...CAGTAACTTCATAAGAACAGTGGTTGGGCATTTATTTGGTTGGCACCAATATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389757.7
CDS CCA 72 bp AGCCGGCCCCGAGTGCTGAGGAGGGCGGGCGCCCAGTaGTGTCGAGGGCGACTTGGGGCGCGCGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: SRPRVLRRAGAQ*CRGRLGARGGR
Trigger: CCTGCCGCCGCGCGCCCCAAGTCGCCCTCGACACCACTGGGCGCCCGCCCTCCTCAGCACTCGGGGCCGGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS TCA 72 bp GCCGGCAGCGCGCGTCCCCCGCTGTACACACACACCTaGCTACCGCTGCGCCCCGAGCGGCCACGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: AGSARPPLYTHT*LPLRPERPRPP
Trigger: CGGCGGCCGTGGCCGCTCGGGGCGCAGCGGTAGTCAGGTGTGTGTGTACAGCGGGGGACGCGCGCTGCCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS GCA 72 bp CGGCGGCGGCGGTGGCCAACTTGCCCCTCTACCCCTTaGCCATGGTGCCGCCTCCGCGGCCGGCGTCGACGC +
Preference number: 6 (lower is better)
Translates to: RRRRWPTCPSTP*PWCRLRGRRRR
Trigger: GCGTCGACGCCGGCCGCGGAGGCGGCACCATGGGCAAGGGGTAGAGGGGCAAGTTGGCCACCGCCGCCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389759.8
ENST00000426248.7
CDS GCA 72 bp CGCCCCGAGCGGCCACGGCCGCCGCGGCACCTCCACTaGCCGCGCTCGCGGTGTGTCGCACTCAGCCAACAC +
Preference number: 6 (lower is better)
Translates to: RPERPRPPRHLH*PRSRCVALSQH
Trigger: GTGTTGGCTGAGTGCGACACACCGCGAGCGCGGGCAGTGGAGGTGCCGCGGCGGCCGTGGCCGCTCGGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS CCA 72 bp CGGCGGTGGCCAACTTGCCCCTCTACCCCTTGCCCATaGTGCCGCCTCCGCGGCCGGCGTCGACGCGGACTC +
Preference number: 6 (lower is better)
Translates to: RRWPTCPSTPCP*CRLRGRRRRGL
Trigger: GAGTCCGCGTCGACGCCGGCCGCGGAGGCGGCACCATGGGCAAGGGGTAGAGGGGCAAGTTGGCCACCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389759.8
ENST00000426248.7
CDS TCA 72 bp CTGGGGCTAGAAGGACAGACAGCCGGCCCCGAGTGCTaGGGAGGGCGGGCGCCCAGTGGTGTCGAGGGCGAC +
Preference number: 6 (lower is better)
Translates to: LGLEGQTAGPEC*GGRAPSGVEGD
Trigger: GTCGCCCTCGACACCACTGGGCGCCCGCCCTCCTCAGCACTCGGGGCCGGCTGTCTGTCCTTCTAGCCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS GCA 72 bp CGGCAGCGGGCGGGGATACCAGATCCGCCAGGGAGGTaGCGCAGCTCCGCTTCAACTCCTGGCAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RQRAGIPDPPGR*RSSASTPGRER
Trigger: CCTCTCCCTGCCAGGAGTTGAAGCGGAGCTGCGGCACCTCCCTGGCGGATCTGGTATCCCCGCCCGCTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS GCA 72 bp AATCCGAACAGCCCAGCGTGGGCAGAGGTCGTGCGCTaGGCGTACGGGAGACCGGGGAGAGGAATCGCCGGG +
Preference number: 6 (lower is better)
Translates to: NPNSPAWAEVVR*AYGRPGRGIAG
Trigger: CCCGGCGATTCCTCTCCCCGGTCTCCCGTACGCGCAGCGCACGACCTCTGCCCACGCTGGGCTGTTCGGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS GCA 72 bp GGGCCAGTGGAGGCAGCTTCCTGGCGGGTCTGTGGTTaGCCCTCCTCCACCAATGAGGCCTGCTCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GPVEAASWRVCG*PSSTNEACSGA
Trigger: AGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
ENST00000629219.1
CDS CCA 72 bp TGGTGGCTGTGGTCTCGGGTTCCATGCCTGGGCCAGTaGAGGCAGCTTCCTGGCGGGTCTGTGGTTGCCCCT +
Preference number: 6 (lower is better)
Translates to: WWLWSRVPCLGQ*RQLPGGSVVAP
Trigger: AGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGAGACCACAGCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
ENST00000629219.1
CDS CCA 72 bp GCATTCCTCCAGCTCCGAAGATGCTCCGGTGACCTCTaGCTGCGCGGCGAGAGCTGGGGAGGGAAGGCGCTA +
Preference number: 6 (lower is better)
Translates to: AFLQLRRCSGDL*LRGESWGGKAL
Trigger: TAGCGCCTTCCCTCCCCAGCTCTCGCCGCGCAGCCAGAGGTCACCGGAGCATCTTCGGAGCTGGAGGAATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS CCA 72 bp CTGAAGCTCCAGCTCCGAAGATGCTCCGGTGACCTCTaGCTGCGCGGCGAGAGCTGGGGAGGGAAGGCGCTA +
Preference number: 6 (lower is better)
Translates to: LKLQLRRCSGDL*LRGESWGGKAL
Trigger: TAGCGCCTTCCCTCCCCAGCTCTCGCCGCGCAGCCAGAGGTCACCGGAGCATCTTCGGAGCTGGAGCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462335.1
CDS GCA 72 bp GTGTGGACTCTGCCCCTGGTGCATTCCTCGCATTCCTaGACAATCTGTCGCCAGCCCAGGAGCCGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: VWTLPLVHSSHS*TICRQPRSRQR
Trigger: GCGCTGCCGGCTCCTGGGCTGGCGACAGATTGTGCAGGAATGCGAGGAATGCACCAGGGGCAGAGTCCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421462.5
ENST00000479398.5
CDS CCA 72 bp TCGGGTTCCATGCCTGGGCCAGTGGAGGCAGCTTCCTaGCGGGTCTGTGGTTGCCCCTCCTCCACCAATGAG +
Preference number: 6 (lower is better)
Translates to: SGSMPGPVEAAS*RVCGCPSSTNE
Trigger: CTCATTGGTGGAGGAGGGGCAACCACAGACCCGCCAGGAAGCTGCCTCCACTGGCCCAGGCATGGAACCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000421462.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
ENST00000629219.1
CDS GCA 72 bp CGGGTCTGTGGTTGCCCCTCCTCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCTCCAGCTCCGAAGATG +
Preference number: 6 (lower is better)
Translates to: RVCGCPSSTNEA*SGAGIPPAPKM
Trigger: CATCTTCGGAGCTGGAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421462.5
CDS GCA 72 bp CACCAGGCATCATGGTCACCTGCCACCACGCCCTCCTaGAACCAGGCCGGCACTGACCTTGCTGTCGTAATC +
Preference number: 6 (lower is better)
Translates to: HQASWSPATTPS*NQAGTDLAVVI
Trigger: GATTACGACAGCAAGGTCAGTGCCGGCCTGGTTGCAGGAGGGCGTGGTGGCAGGTGACCATGATGCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492496.1
CDS GCA 72 bp CGGGTCTGTGGTTGCCCCTCCTCCACCAATGAGGCCTaGTCAGGAGCTGGCATTCCTCTTTCCAGCTTAGGC +
Preference number: 6 (lower is better)
Translates to: RVCGCPSSTNEA*SGAGIPLSSLG
Trigger: GCCTAAGCTGGAAAGAGGAATGCCAGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGGCAACCACAGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000389757.7
ENST00000389759.8
ENST00000411900.5
ENST00000426248.7
ENST00000452162.5
ENST00000457109.5
ENST00000628904.2
CDS TCA 72 bp CAGGGCTGCTGCCGTGCAGACTGCACCCATGATGCTTaGGCCTCACTTCTCACTACTGCAGATCCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: QGCCRADCTHDA*ASLLTTADPWR
Trigger: ACGCCAAGGATCTGCAGTAGTGAGAAGTGAGGCTCAAGCATCATGGGTGCAGTCTGCACGGCAGCAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS CAA 90 bp CTTCTCAGTCCTGCTGAGGATTTGACTTCATGCCGACCGAAATGCTaGAGGCTCCGGCCCAGTGTTTCTCTTCAGGGCTGCTGCCGTGCA +
Preference number: 6 (lower is better)
Translates to: LLSPAEDLTSCRPKC*RLRPSVSLQGCCRA
Trigger: TGCACGGCAGCAGCCCTGAAGAGAAACACTGGGCCGGAGCCTCAAGCATTTCGGTCGGCATGAAGTCAAATCCTCAGCAGGACTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS GCA 72 bp GCTGACGGTTCTGATGCATGTGGAAAACACAGAGACTaGTCGAGCCAGGAGGGGACGGAGCAAAGGGACTGT +
Preference number: 6 (lower is better)
Translates to: ADGSDACGKHRD*SSQEGTEQRDC
Trigger: ACAGTCCCTTTGCTCCGTCCCCTCCTGGCTCGAGCAGTCTCTGTGTTTTCCACATGCATCAGAACCGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CAA 72 bp CCTGCTGAGGATTTGACTTCATGCCGACCGAAATGCTaGAGGCTCCGGCCCAGTGTTTCTCTTCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: PAEDLTSCRPKC*RLRPSVSLQGC
Trigger: GCAGCCCTGAAGAGAAACACTGGGCCGGAGCCTCAAGCATTTCGGTCGGCATGAAGTCAAATCCTCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS TCA 72 bp TTGAGCCTCACTTCTCACTACTGCAGATCCTTGGCGTaGCAACAGATGCCCCAACTCCCTCCCTGGGGACAA +
Preference number: 6 (lower is better)
Translates to: LSLTSHYCRSLA*QQMPQLPPWGQ
Trigger: TTGTCCCCAGGGAGGGAGTTGGGGCATCTGTTGTCACGCCAAGGATCTGCAGTAGTGAGAAGTGAGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS GCA 72 bp CTTCTCACTACTGCAGATCCTTGGCGTGACAACAGATaGCCCAACTCCCTCCCTGGGGACAACTATATCCCC +
Preference number: 6 (lower is better)
Translates to: LLTTADPWRDNR*PNSLPGDNYIP
Trigger: GGGGATATAGTTGTCCCCAGGGAGGGAGTTGGGGCATCTGTTGTCACGCCAAGGATCTGCAGTAGTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS GCA 72 bp AGTCCTGCTGAGGATTTGACTTCATGCCGACCGAAATaGTTGAGGCTCCGGCCCAGTGTTTCTCTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: SPAEDLTSCRPK*LRLRPSVSLQG
Trigger: GCCCTGAAGAGAAACACTGGGCCGGAGCCTCAAGCATTTCGGTCGGCATGAAGTCAAATCCTCAGCAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480171.7
CDS CCA 72 bp CAGACGCACAAGTATCCTGCATGTTCCGATTCTGACTaGCACCTGGAGCGGCTCTACATGCCAGTCATCCCA +
Preference number: 6 (lower is better)
Translates to: QTHKYPACSDSD*HLERLYMPVIP
Trigger: TGGGATGACTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGTGCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS CAA 72 bp AAGTTGCCACGTCCTTGCCCCTGTAACTTTGGAGACTaGCCCTTTGATCTGGAGAGTGGCCTCCTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: KLPRPCPCNFGD*PFDLESGLLRR
Trigger: CCTCCTCAGGAGGCCACTCTCCAGATCAAAGGGCAAGTCTCCAAAGTTACAGGGGCAAGGACGTGGCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492496.1
CDS CCA 72 bp TGTCTCAATACAAGCACAGGCTACTTCCCAGGCCACTaGCCAAGCGCCTGGAAATGCGGCTTTTCAAGAGAC +
Preference number: 6 (lower is better)
Translates to: CLNTSTGYFPGH*PSAWKCGFSRD
Trigger: GTCTCTTGAAAAGCCGCATTTCCAGGCGCTTGGCCAGTGGCCTGGGAAGTAGCCTGTGCTTGTATTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS GCA 72 bp GTTCCGATTCTGACTGGCACCTGGAGCGGCTCTACATaGCAGTCATCCCAATGTACTCAGGGATGTAAACAC +
Preference number: 6 (lower is better)
Translates to: VPILTGTWSGST*QSSQCTQGCKH
Trigger: GTGTTTACATCCCTGAGTACATTGGGATGACTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS CAA 90 bp TATTTTCTTAAGTTGCCACGTCCTTGCCCCTGTAACTTTGGAGACTaGCCCTTTGATCTGGAGAGTGGCCTCCTGAGGAGGACAGGATCC +
Preference number: 6 (lower is better)
Translates to: YFLKLPRPCPCNFGD*PFDLESGLLRRTGS
Trigger: GGATCCTGTCCTCCTCAGGAGGCCACTCTCCAGATCAAAGGGCAAGTCTCCAAAGTTACAGGGGCAAGGACGTGGCAACTTAAGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492496.1
CDS TCA 72 bp CACCACCATGGGCTACAGCATCTGCTGTATGAGCCTTaGTGGTATGGCATAAACATGAGGACTGGCGGTACA +
Preference number: 6 (lower is better)
Translates to: HHHGLQHLLYEP*WYGINMRTGGT
Trigger: TGTACCGCCAGTCCTCATGTTTATGCCATACCATCAAGGCTCATACAGCAGATGCTGTAGCCCATGGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494945.1
CDS GCA 72 bp CCCCAAAGTAGGAAAGGGAATGACTGGAACATGGTTTaGTGCTGGGGGACTGTCTCAATACAAGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: PQSRKGNDWNMV*CWGTVSIQAQA
Trigger: AGCCTGTGCTTGTATTGAGACAGTCCCCCAGCAGCAAACCATGTTCCAGTCATTCCCTTTCCTACTTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CCA 72 bp ACAAGTATCCTGCATGTTCCGATTCTGACTGGCACCTaGAGCGGCTCTACATGCCAGTCATCCCAATGTACT +
Preference number: 6 (lower is better)
Translates to: TSILHVPILTGT*SGSTCQSSQCT
Trigger: AGTACATTGGGATGACTGGCATGTAGAGCCGCTCCAGGTGCCAGTCAGAATCGGAACATGCAGGATACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457109.5
CDS CCA 72 bp ATGCGGCTTTTCAAGAGACTGTATCACACACCCAACTaGCGTCTTACCAGGGTACAGGCCTTTATGTGTGGC +
Preference number: 6 (lower is better)
Translates to: MRLFKRLYHTPN*RLTRVQAFMCG
Trigger: GCCACACATAAAGGCCTGTACCCTGGTAAGACGCCAGTTGGGTGTGTGATACAGTCTCTTGAAAAGCCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CAA 72 bp CTTACCAGGGTACAGGCCTTTATGTGTGGCATCCCCTaGGCTATTGTAATACTGCATAGGTGGCTGGGTCCT +
Preference number: 6 (lower is better)
Translates to: LTRVQAFMCGIP*AIVILHRWLGP
Trigger: AGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCCACACATAAAGGCCTGTACCCTGGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CAA 90 bp AACTGGCGTCTTACCAGGGTACAGGCCTTTATGTGTGGCATCCCCTaGGCTATTGTAATACTGCATAGGTGGCTGGGTCCTATCGTATTC +
Preference number: 6 (lower is better)
Translates to: NWRLTRVQAFMCGIP*AIVILHRWLGPIVF
Trigger: GAATACGATAGGACCCAGCCACCTATGCAGTATTACAATAGCCAAGGGGATGCCACACATAAAGGCCTGTACCCTGGTAAGACGCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CCA 72 bp AGTAGGAAAGGGAATGACTGGAACATGGTTTGCTGCTaGGGGACTGTCTCAATACAAGCACAGGCTACTTCC +
Preference number: 6 (lower is better)
Translates to: SRKGNDWNMVCC*GTVSIQAQATS
Trigger: GGAAGTAGCCTGTGCTTGTATTGAGACAGTCCCCCAGCAGCAAACCATGTTCCAGTCATTCCCTTTCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS GCA 72 bp CAAAGTAGGAAAGGGAATGACTGGAACATGGTTTGCTaGTGGGGGACTGTCTCAATACAAGCACAGGCTACT +
Preference number: 6 (lower is better)
Translates to: QSRKGNDWNMVC*WGTVSIQAQAT
Trigger: AGTAGCCTGTGCTTGTATTGAGACAGTCCCCCAGCAGCAAACCATGTTCCAGTCATTCCCTTTCCTACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CAA 72 bp CCCATGAGTAACACAAGATACTGGTGCTGGCGATGCTaGGTGATTCTGCTCCAAGCCTACATCTTTCTAGCT +
Preference number: 6 (lower is better)
Translates to: PMSNTRYWCWRC*VILLQAYIFLA
Trigger: AGCTAGAAAGATGTAGGCTTGGAGCAGAATCACCAAGCATCGCCAGCACCAGTATCTTGTGTTACTCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411900.5
CDS GCA 72 bp CGGTTCTCAGGATATTTTCTTAAGTTGCCACGTCCTTaGCCCTGTAACTTTGGAGACTTGCCCTTTGATCTG +
Preference number: 6 (lower is better)
Translates to: RFSGYFLKLPRP*PCNFGDLPFDL
Trigger: CAGATCAAAGGGCAAGTCTCCAAAGTTACAGGGGCAAGGACGTGGCAACTTAAGAAAATATCCTGAGAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492496.1
CDS GCA 72 bp CTCTGTTCTCACGGTTCTCAGGATATTTTCTTAAGTTaGCACGTCCTTGCCCCTGTAACTTTGGAGACTTGC +
Preference number: 6 (lower is better)
Translates to: LCSHGSQDIFLS*HVLAPVTLETC
Trigger: GCAAGTCTCCAAAGTTACAGGGGCAAGGACGTGGCAACTTAAGAAAATATCCTGAGAACCGTGAGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492496.1
CDS CCA 72 bp AAAGGCAACAATCCCCAAAGTAGGAAAGGGAATGACTaGAACATGGTTTGCTGCTGGGGGACTGTCTCAATA +
Preference number: 6 (lower is better)
Translates to: KGNNPQSRKGND*NMVCCWGTVSI
Trigger: TATTGAGACAGTCCCCCAGCAGCAAACCATGTTCCAGTCATTCCCTTTCCTACTTTGGGGATTGTTGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486254.3
CDS CCA 72 bp TCAGGCTGCCAAACAATACTTTTCGTTAGATCTTTCTaGATCTTAATGTATGAACTGGGTACAGTTACACAT +
Preference number: 6 (lower is better)
Translates to: SGCQTILFVRSF*ILMYELGTVTH
Trigger: ATGTGTAACTGTACCCAGTTCATACATTAAGATCCAGAAAGATCTAACGAAAAGTATTGTTTGGCAGCCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486254.3
ENST00000495123.5