RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKLR (Homo sapiens)

Ensembl gene IDs: ENSG00000143627, ENSG00000262785

Ensembl transcript IDs: ENST00000342741.6, ENST00000392414.7, ENST00000571194.5, ENST00000572740.1, ENST00000573938.1

Found 583 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAAGGTATCCAAGCCTGGGGAAGGGCAGGCCAGCCAGCACCTCTaGCTTCTCAGGGACAAGAGTAGTCCTTTACCACCCTCACTCTGC +
Preference number: 1 (lower is better)
Translates to: PKVSKPGEGQASQHL*LLRDKSSPLPPSLC
Trigger: GCAGAGTGAGGGTGGTAAAGGACTACTCTTGTCCCTGAGAAGGCAGAGGTGCTGGCTGGCCTGCCCTTCCCCAGGCTTGGATACCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR TCA 90 bp AAGGAAGCAGCCGGGGATTTGACCAAGCAGGGTATCAGGCAGGCATaGGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTG +
Preference number: 1 (lower is better)
Translates to: KEAAGDLTKQGIRQA*EQPGQWSTSPARRL
Trigger: CAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATGCCTGCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR CCA 90 bp TGCTGTTGGTGCAGGAATAAGGGAAAGGCCCAAGGTATCCAAGCCTaGGGAAGGGCAGGCCAGCCAGCACCTCTGCCTTCTCAGGGACAA +
Preference number: 1 (lower is better)
Translates to: CCWCRNKGKAQGIQA*GRAGQPAPLPSQGQ
Trigger: TTGTCCCTGAGAAGGCAGAGGTGCTGGCTGGCCTGCCCTTCCCCAGGCTTGGATACCTTGGGCCTTTCCCTTATTCCTGCACCAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR TCA 90 bp GAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGATTTaGCCAAGCAGGGTATCAGGCAGGCATGAGAGCAGCCAGGACAGT +
Preference number: 1 (lower is better)
Translates to: EWEGISGCRRKQPGI*PSRVSGRHESSQDS
Trigger: ACTGTCCTGGCTGCTCTCATGCCTGCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR GCA 90 bp CTCTGCCTTCTCAGGGACAAGAGTAGTCCTTTACCACCCTCACTCTaGCTGTCCCCTCTCCTACTCTACAGCATTAAAGACTGTGGGACC +
Preference number: 1 (lower is better)
Translates to: LCLLRDKSSPLPPSL*LSPLLLYSIKDCGT
Trigger: GGTCCCACAGTCTTTAATGCTGTAGAGTAGGAGAGGGGACAGGCAGAGTGAGGGTGGTAAAGGACTACTCTTGTCCCTGAGAAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR TCA 90 bp ACCAGCCAAACTGGGATTAAAGACTCAAGGCATCTTAGGGCCTGCTaGGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTG +
Preference number: 1 (lower is better)
Translates to: TSQTGIKDSRHLRAC*ADWMQGMYNWCCWV
Trigger: CACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAATCCCAGTTTGGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR CCA 90 bp TGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTaGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: CRECTIGAVGWPVHN*TQTFRTCVKWRWGR
Trigger: CCTTCCCCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR GCA 90 bp GGATTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATaGAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAAT +
Preference number: 1 (lower is better)
Translates to: GLKTQGILGPAEQIG*RECTIGAVGWPVHN
Trigger: ATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR CCA 90 bp GCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTaGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAA +
Preference number: 1 (lower is better)
Translates to: AEQIGCRECTIGAVG*PVHNWTQTFRTCVK
Trigger: TTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp CGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTCCGCCTCCCGGACGTTaGCGATGGACTCAGCATGGT +
Preference number: 2 (lower is better)
Translates to: RCSRSPASGTRGPQSPAPPPPGR*RWTQHG
Trigger: ACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGG...AGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CCA 90 bp CGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTTACTCGTGGGAGCCGTaGGAGAAGTTGAGTCGCGCA +
Preference number: 2 (lower is better)
Translates to: RCSRSPASGTRGPQSPAPYSWEP*EKLSRA
Trigger: TGCGCGACTCAACTTCTCCCACGGCTCCCACGAGTA...AGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CCA 90 bp GTCCACCCACACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCCCGGACGTTGGCGATaGACTCAGCATGGTACTCGT +
Preference number: 2 (lower is better)
Translates to: VHPHGVRVPPRPERGVHSPGRWR*TQHGTR
Trigger: ACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGG...ACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCGTGTGGGTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CCA 90 bp ATTGGGGTAGTCCACCCACACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGGGCCGGTAGCTGAGTaGGGAACCTGCAAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: IGVVHPHGVRVPPRPERGGPVAE*GTCKAL
Trigger: GAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCC...CCCGCGTTCCGGACGCGGGGGAACGCGAACACCGTGTGGGTGGACTACCCCAAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR GCA 90 bp GGGCCGGTAGCTGAGTGGGGAACCTGCAAAGCTCTCCACCGCCTCCCGGACGTTCTCCACGGAGCGAGATaGTGGCCCGATGGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: GPVAEWGTCKALHRLPDVLHGAR*WPDGGN
Trigger: ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAG...AACGTCCGGGAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR TCA 90 bp GCTGAGTGGGGAACCTGCAAAGCTCTCCACCGCCTCCCGGACGTTGGCGATGGAGCCCGATGGTGGCAATaGTGCTGGTACTGCGAGCAG +
Preference number: 2 (lower is better)
Translates to: AEWGTCKALHRLPDVGDGARWWQ*CWYCEQ
Trigger: CTGCTCGCAGTACCAGCATCATTGCCACCATCGGGC...TCCATCGCCAACGTCCGGGAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CCA 90 bp CACGACCCGGACAATATTGGGGTAGTCCACCCACACGGTGTTCGCGTTCCCCCGGGATCTCCGGTCCCTTaGTGTCCAGGGCGATGGCCA +
Preference number: 2 (lower is better)
Translates to: HDPDNIGVVHPHGVRVPPGSPVP*CPGRWP
Trigger: TGGCCATCGCCCTGGACACCAAGGGACCGGAGATCC...CGGGGGAACGCGAACACCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR CAA 90 bp GAGAAGTTGAGTCGCGCAATGTTCATCCCGGCCTTGATCATCTCCTaGAGGCGCTCCACGGAGCGAGATGCTGGCCCGATGGTGGCAATG +
Preference number: 2 (lower is better)
Translates to: EKLSRAMFIPALIIS*RRSTERDAGPMVAM
Trigger: CATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAGCGCCTCAAGGAGATGATCAAGGCCGGGATGAACATTGCGCGACTCAACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGCTGGGGAGGAAGGGATaGGGTACAAGGGTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVLGRKG*GTRVGW
Trigger: CCAGCCTACCCTTGTACCCCATCCCTTCCTCCCCAG...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR GCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGACTGTGGACAAGATTaGCCTGTCTCCCCTCTCCCC +
Preference number: 2 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGDCGQD*PVSPLP
Trigger: GGGGAGAGGGGAGACAGGGCAATCTTGTCCACAGTC...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCACTGGGGAGGAAGGGATaGGGTACAAGGGTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPLGRKG*GTRVGW
Trigger: CCAGCCTACCCTTGTACCCCATCCCTTCCTCCCCAG...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR TCA 90 bp AGCCTCTGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAAAGCAGCCGGGGATTTaGCCAAGCAGGGTATCAGGC +
Preference number: 2 (lower is better)
Translates to: SLCGPCPNPSAQYLNLLPKQPGI*PSRVSG
Trigger: GCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTT...TGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR GCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACAAAATCAGCTaGCCAGCCCTCACTTCTCCC +
Preference number: 2 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDSDKIS*PALTSP
Trigger: GGGAGAAGTGAGGGCTGGGCAGCTGATTTTGTCACT...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGGGGAGGAAGGGATaGGGTACAAGGGTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: ALARDAQIIMRATYENGRLGRKG*GTRVGW
Trigger: CCAGCCTACCCTTGTACCCCATCCCTTCCTCCCCAG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGCTTTGGAGGGGTGTaGGCTGGAGAACGTAGACTG +
Preference number: 2 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPGFGGV*AGERRL
Trigger: CAGTCTACGTTCTCCAGCCCACACCCCTCCAAAGCC...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGGCTTTGGAGGGGTGTaGGCTGGAGAACGTAGACTG +
Preference number: 2 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDGFGGV*AGERRL
Trigger: CAGTCTACGTTCTCCAGCCCACACCCCTCCAAAGCC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACATTAAAGGTGGGGCTTTaGAGGGGTGTGGGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTLKVGL*RGVGWR
Trigger: TCTCCAGCCCACACCCCTCCAAAGCCCCACCTTTAA...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR TCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACTTTCAGGACCTGTGTaGAATGGAGATGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTLSGPV*NGDGEG
Trigger: CCCTTCCCCATCTCCATTTCACACAGGTCCTGAAAG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR TCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATCATCTTAGGGCCTGCTaGGCAGATTGGATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDHLRAC*ADWMQG
Trigger: TCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATG...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR GCA 90 bp AAGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAATGCCCTGGCACGAGATaGCCAGATTATCATGAGGGC +
Preference number: 2 (lower is better)
Translates to: KSPFLLGGEFWGSWCVGECPGTR*PDYHEG
Trigger: GCCCTCATGATAATCTGGGCATCTCGTGCCAGGGCA...TTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR GCA 90 bp CCTTCTGAGTTTGCTGTTGGTGCAGGAATAAGGGAAAGGCCCAAGGTATCCAAGCATGAAGGGGTAGCCTaGCCTGGCACGAGATGCCCA +
Preference number: 2 (lower is better)
Translates to: PSEFAVGAGIRERPKVSKHEGVA*PGTRCP
Trigger: TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATG...CTTGGATACCTTGGGCCTTTCCCTTATTCCTGCACCAACAGCAAACTCAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR CCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATCTGGAGAACGTAGACTaGGGAGGAAGGGATGGGGTA +
Preference number: 2 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDLENVD*GGRDGV
Trigger: TACCCCATCCCTTCCTCCCCAGTCTACGTTCTCCAG...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGTTAAAGGTGGGGCTTTaGAGGGGTGTGGGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVLKVGL*RGVGWR
Trigger: TCTCCAGCCCACACCCCTCCAAAGCCCCACCTTTAA...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACTGTGTGAAATGGAGATaGGGAAGGGGCAACCTCGAA +
Preference number: 2 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDCVKWR*GRGNLE
Trigger: TTCGAGGTTGCCCCTTCCCCATCTCCATTTCACACA...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAAGGACCTGTGTGAAATaGAGATGGGGAAGGGGCAAC +
Preference number: 2 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGRTCVK*RWGRGN
Trigger: GTTGCCCCTTCCCCATCTCCATTTCACACAGGTCCT...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCAGGGAATGTACAATTaGTGCTGTTGGGTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDQGMYN*CCWVAS
Trigger: ACTGGCCACCCAACAGCACCAATTGTACATTCCCTG...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR TCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACATGAGGGCTACATATaGGAATGGGAGACTGTGGAC +
Preference number: 2 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTHEGYI*EWETVD
Trigger: GTCCACAGTCTCCCATTCTCATATGTAGCCCTCATG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGGCTTTGGAGGGGTGTaGGCTGGAGAACGTAGACTG +
Preference number: 2 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRGFGGV*AGERRL
Trigger: CAGTCTACGTTCTCCAGCCCACACCCCTCCAAAGCC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAAGGGATGGGATGCCTaGGGTTATGGAATTAACCAG +
Preference number: 2 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDKGWDA*GYGINQ
Trigger: CTGGTTAATTCCATAACCCCAGGCATCCCATCCCTT...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR CAA 90 bp GGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTG +
Preference number: 2 (lower is better)
Translates to: GLLSRLDAGNVQLVL*GGQCIIGHRLSGPV
Trigger: CACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR GCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACTGTTGGGTGGCCAGTaGATAATTGGACACAGACTT +
Preference number: 2 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTLLGGQ*IIGHRL
Trigger: AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGATTAAAGGTGGGGCTTTaGAGGGGTGTGGGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRLKVGL*RGVGWR
Trigger: TCTCCAGCCCACACCCCTCCAAAGCCCCACCTTTAA...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp AAGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAACAGGGAATGTACAATTaGTGCTGTTGGGTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: KSPFLLGGEFWGSWCVGEQGMYN*CCWVAS
Trigger: ACTGGCCACCCAACAGCACCAATTGTACATTCCCTG...TTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR TCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTaGAATGGAGATGGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRLSGPV*NGDGEG
Trigger: CCCTTCCCCATCTCCATTTCACACAGGTCCTGAAAG...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTTTAAAGGTGGGGCTTTaGAGGGGTGTGGGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: LKTQGILGPAEQIGCRECLKVGL*RGVGWR
Trigger: TCTCCAGCCCACACCCCTCCAAAGCCCCACCTTTAA...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAAGGACCTGTGTGAAATaGAGATGGGGAAGGGGCAAC +
Preference number: 2 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRRTCVK*RWGRGN
Trigger: GTTGCCCCTTCCCCATCTCCATTTCACACAGGTCCT...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATTGGCCAGTGCATAATTaGACACAGACTTTCAGGACC +
Preference number: 2 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDWPVHN*TQTFRT
Trigger: GGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR TCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTCATCTTAGGGCCTGCTaGGCAGATTGGATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSHLRAC*ADWMQG
Trigger: TCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATG...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCCTGGAGAACGTAGACTaGGGAGGAAGGGATGGGGTA +
Preference number: 2 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFLENVD*GGRDGV
Trigger: TACCCCATCCCTTCCTCCCCAGTCTACGTTCTCCAG...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CCA 90 bp CCTTCTGAGTTTGCTGTTGGTGCAGGAATAAGGGAAAGGCCCAAGGTATCCAAGTGTGTGAAATGGAGATaGGGAAGGGGCAACCTCGAA +
Preference number: 2 (lower is better)
Translates to: PSEFAVGAGIRERPKVSKCVKWR*GRGNLE
Trigger: TTCGAGGTTGCCCCTTCCCCATCTCCATTTCACACA...CTTGGATACCTTGGGCCTTTCCCTTATTCCTGCACCAACAGCAAACTCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR CCA 90 bp AGCCTCTGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCACTCTTGGTTTGTGTGTaGGAACAACATGAGTGGGAA +
Preference number: 2 (lower is better)
Translates to: SLCGPCPNPSAQYLNLLPLLVCV*EQHEWE
Trigger: TTCCCACTCATGTTGTTCCCACACACAAACCAAGAG...TGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR CCA 90 bp AGCCTCTGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAAGACACACTCATTTTTaGCTCTTGGTTTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: SLCGPCPNPSAQYLNLLPRHTHF*LLVCVW
Trigger: CCACACACAAACCAAGAGCCAAAAATGAGTGTGTCT...TGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR CCA 90 bp TGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGGGGTTCTTGGTGTGTaGGAGAAGTTTTATAATTGC +
Preference number: 2 (lower is better)
Translates to: CGPCPNPSAQYLNLLPGRGVLGV*EKFYNC
Trigger: GCAATTATAAAACTTCTCCCACACACCAAGAACCCC...CCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR GCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTGGAATGTACAATTGGTaGTGTTGGGTGGCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSGMYNW*CWVASA
Trigger: TGCACTGGCCACCCAACAGCACCAATTGTACATTCC...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTCAGGGAATGTACAATTaGTGCTGTTGGGTGGCCAGT +
Preference number: 2 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSQGMYN*CCWVAS
Trigger: ACTGGCCACCCAACAGCACCAATTGTACATTCCCTG...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGATGGCCAGTGCATAATTaGACACAGACTTTCAGGACC +
Preference number: 2 (lower is better)
Translates to: DAQIIMRATYENGRLWTRWPVHN*TQTFRT
Trigger: GGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR GCA 72 bp GGCGATGGCCACGGGCCGGTAGCTGAGTGGGGAACCTaGAAAGCTCTCCACCGCCTCCCGGACGTTGGCGAT +
Preference number: 3 (lower is better)
Translates to: GDGHGPVAEWGT*KALHRLPDVGD
Trigger: ATCGCCAACGTCCGGGAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGGCCATCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CAA 90 bp ACCCACACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCGCCTTGATCATCTCCTaGAGGCGCTCCACGGAGCGA +
Preference number: 3 (lower is better)
Translates to: THTVFAFPRVRNAGSTVTALIIS*RRSTER
Trigger: TCGCTCCGTGGAGCGCCTCAAGGAGATGATCAAGGC...GGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCGTGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR CCA 72 bp CGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTaGGAGCCCTTCACCAGCTCCACTTCCGACTCTGGA +
Preference number: 3 (lower is better)
Translates to: RVRNAGSTVTST*EPFTSSTSDSG
Trigger: TCCAGAGTCGGAAGTGGAGCTGGTGAAGGGCTCCCAGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CAA 90 bp GGCCACGGGCCGGTAGCTGAGTGGGGAACCTGCAAAGCTCTCCACCGCCTCCCGATGTTCATCCCGGCCTaGATCATCTCCTTGAGGCGC +
Preference number: 3 (lower is better)
Translates to: GHGPVAEWGTCKALHRLPMFIPA*IISLRR
Trigger: GCGCCTCAAGGAGATGATCAAGGCCGGGATGAACAT...CGGGAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CAA 90 bp CACGACCCGGACAATATTGGGGTAGTCCACCCACACGGTGTTCGCGTTCCCCCGACCGCCTCCCGGACGTaGGCGATGGACTCAGCATGG +
Preference number: 3 (lower is better)
Translates to: HDPDNIGVVHPHGVRVPPTASRT*AMDSAW
Trigger: CCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGT...CGGGGGAACGCGAACACCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR CCA 72 bp CTGCAAAGCTCTCCACCGCCTCCCGGACGTTGGCGATaGACTCAGCATGGTACTCGTGGGAGCCGTGGGAGA +
Preference number: 3 (lower is better)
Translates to: LQSSPPPPGRWR*TQHGTRGSRGR
Trigger: TCTCCCACGGCTCCCACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGTGGAGAGCTTTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR CCA 72 bp GGGAACCTGCAAAGCTCTCCACCGCCTCCCGGACGTTaGCGATGGACTCAGCATGGTACTCGTGGGAGCCGT +
Preference number: 3 (lower is better)
Translates to: GNLQSSPPPPGR*RWTQHGTRGSR
Trigger: ACGGCTCCCACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGTGGAGAGCTTTGCAGGTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR-3UTR CAA 90 bp CTGCAGGATCCCAGTGCGGATCTCCGGTCCCTTGGTGTCCAGGGCGATGGCCACGAGCCGTGGGAGAAGTaGAGTCGCGCAATGTTCATC +
Preference number: 3 (lower is better)
Translates to: LQDPSADLRSLGVQGDGHEPWEK*SRAMFI
Trigger: GATGAACATTGCGCGACTCAACTTCTCCCACGGCTC...GTGGCCATCGCCCTGGACACCAAGGGACCGGAGATCCGCACTGGGATCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR TCA 72 bp GCCGGGGATTTGACCAAGCAGGGTATCAGGCAGGCATaGGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: AGDLTKQGIRQA*EQPGQWSTSPA
Trigger: TGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATGCCTGCCTGATACCCTGCTTGGTCAAATCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR TCA 72 bp GGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGATTTaGCCAAGCAGGGTATCAGGCAGGCATGAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: GISGCRRKQPGI*PSRVSGRHESS
Trigger: GCTGCTCTCATGCCTGCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR GCA 72 bp CAGCACGGAGGTTGTGAAGACAGTGACAAAATCAGCTaGCCAGCCCTCACTTCTCCCCAGCATCCATCCCAC +
Preference number: 3 (lower is better)
Translates to: QHGGCEDSDKIS*PALTSPQHPSH
Trigger: GTGGGATGGATGCTGGGGAGAAGTGAGGGCTGGGCAGCTGATTTTGTCACTGTCTTCACAACCTCCGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CAA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGAGNVQ*VLLGGQ
Trigger: CTGGCCACCCAACAGCACCAATTGTACATTCCCTGC...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CAA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGGGCCTGCTGAGCAGATaGGATGCAGGGAATGTACAA +
Preference number: 3 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVGLLSR*DAGNVQ
Trigger: TTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCC...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CAA 90 bp TGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: CGPCPNPSAQYLNLLPGRAGNVQ*VLLGGQ
Trigger: CTGGCCACCCAACAGCACCAATTGTACATTCCCTGC...CCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
3UTR-3UTR CAA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGGGCCTGCTGAGCAGATaGGATGCAGGGAATGTACAA +
Preference number: 3 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGGLLSR*DAGNVQ
Trigger: TTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCC...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CAA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: ALARDAQIIMRATYENGRAGNVQ*VLLGGQ
Trigger: CTGGCCACCCAACAGCACCAATTGTACATTCCCTGC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR TCA 72 bp GGTAGCCTGCCCTGGCACGAGATGCCCAGATTATCATaGGGGCTACATATGAGAATGGGAGACTGTGGACAA +
Preference number: 3 (lower is better)
Translates to: GSLPWHEMPRLS*GLHMRMGDCGQ
Trigger: TTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGCAGGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR GCA 72 bp ACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATaGAGGGAATGTACAATTGGTGCTGTTGGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: TQGILGPAEQIG*RECTIGAVGWP
Trigger: TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR-3UTR CAA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATT +
Preference number: 3 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTVQLVL*GGQCII
Trigger: AATTATGCACTGGCCACCCAACAGCACCAATTGTAC...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CAA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATT +
Preference number: 3 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGVQLVL*GGQCII
Trigger: AATTATGCACTGGCCACCCAACAGCACCAATTGTAC...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR-3UTR CAA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGGCCTGCTGAGCAGATaGGATGCAGGGAATGTACAA +
Preference number: 3 (lower is better)
Translates to: ALARDAQIIMRATYENGRGLLSR*DAGNVQ
Trigger: TTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR GCA 72 bp TTTCATGTAACTGTTAGTCACCATGAAGGGGTAGCCTaGCCTGGCACGAGATGCCCAGATTATCATGAGGGC +
Preference number: 3 (lower is better)
Translates to: FHVTVSHHEGVA*PGTRCPDYHEG
Trigger: GCCCTCATGATAATCTGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR CCA 72 bp ATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTaGCCAGTGCATAATTGGACACAGACTTTCAGGACC +
Preference number: 3 (lower is better)
Translates to: IGCRECTIGAVG*PVHNWTQTFRT
Trigger: GGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR CCA 72 bp TGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTaGACACAGACTTTCAGGACCTGTGTGAAATGGAGA +
Preference number: 3 (lower is better)
Translates to: CTIGAVGWPVHN*TQTFRTCVKWR
Trigger: TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
3UTR TCA 72 bp TCATTTTTGGCTCTTGGTTTGTGTGTGGGAACAACATaGGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: SFLALGLCVGTT*VGRNFWVQKEA
Trigger: TGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCACACACAAACCAAGAGCCAAAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGCCACGGGCCGGTAGCTGAGTGGGGAACCTGCAAAGCTCTCCACCGCCTCCCGGGATCTCCGGTCCCTTaGTGTCCAGGGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: GHGPVAEWGTCKALHRLPGSPVP*CPGRWP
Trigger: TGGCCATCGCCCTGGACACCAAGGGACCGGAGATCC...CGGGAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR TCA 90 bp ACCCACACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCGCCCGATGGTGGCAATaGTGCTGGTACTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: THTVFAFPRVRNAGSTVTARWWQ*CWYCEQ
Trigger: CTGCTCGCAGTACCAGCATCATTGCCACCATCGGGC...GGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCGTGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR GCA 90 bp CGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTCTCCACGGAGCGAGATaGTGGCCCGATGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RCSRSPASGTRGPQSPAPLHGAR*WPDGGN
Trigger: ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAG...AGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp GTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTGGGCGATGGACTCAGCATaGTACTCGTGGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: VFAFPRVRNAGSTVTSTWAMDSA*YSWEPW
Trigger: CCACGGCTCCCACGAGTACCATGCTGAGTCCATCGC...CCAGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp CCACACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGGGGCCGGTAGCTGAGTaGGGAACCTGCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PHGVRVPPRPERGVHSHQGPVAE*GTCKAL
Trigger: GAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCC...CTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCGTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR GCA 90 bp GTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTGGCTGCTGCTGCTTCCATaGCACTGCACACCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VFAFPRVRNAGSTVTSTWLLLLP*HCTPLW
Trigger: CCAGAGAGGTGTGCAGTGGCATGGAAGCAGCAGCAG...CCAGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp CGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTCCCGGACGTTGGCGATaGACTCAGCATGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: RCSRSPASGTRGPQSPAPPGRWR*TQHGTR
Trigger: ACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGG...AGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp GTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTGGGGGTCTCCCTCTCTGTaGGTCTGCTCCACACTGTTG +
Preference number: 4 (lower is better)
Translates to: VFAFPRVRNAGSTVTSTWGSPSL*VCSTLL
Trigger: CAACAGTGTGGAGCAGACCCACAGAGAGGGAGACCC...CCAGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp CGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTGTCTGCCATAGCAGCTaGCAGCTGCTGCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RCSRSPASGTRGPQSPAPVCHSS*QLLLLP
Trigger: TGGAAGCAGCAGCAGCTGCCAGCTGCTATGGCAGAC...AGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
3UTR CAA 72 bp GGGGAACCTGCAAAGCTCTCCACCGCCTCCCGGACGTaGGCGATGGACTCAGCATGGTACTCGTGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GEPAKLSTASRT*AMDSAWYSWEP
Trigger: CGGCTCCCACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGTGGAGAGCTTTGCAGGTTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR GCA 90 bp CCACACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCCCTCTCTGTGGGTCTaGTCCACACTGTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PHGVRVPPRPERGVHSHQPSLWV*STLLGC
Trigger: ACAACCCAACAGTGTGGAGCAGACCCACAGAGAGGG...CTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR GCA 90 bp GTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCTGGATAGCAGCTGGCAGCTaGTGCTGCTTCCATGCCACT +
Preference number: 4 (lower is better)
Translates to: VFAFPRVRNAGSTVTSTWIAAGS*CCFHAT
Trigger: AGTGGCATGGAAGCAGCAGCAGCTGCCAGCTGCTAT...CCAGGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR TCA 90 bp GATCATCTCCTTGAGGCGCTCCACGGAGCGAGATGCTGGCCCGATGGTGGCAATCCACGGGCCGGTAGCTaGGTGGGGAACCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: DHLLEALHGARCWPDGGNPRAGS*VGNLQS
Trigger: GCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGG...ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAGCGCCTCAAGGAGATGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR GCA 90 bp GCACGACCCGGACAATATTGGGGTAGTCCACCCACACGGTGTTCGCGTTCCCCCCCTGCAGGATCCCAGTaGGGATCTCCGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ARPGQYWGSPPTRCSRSPPAGSQ*GSPVPW
Trigger: CCAAGGGACCGGAGATCCGCACTGGGATCCTGCAGG...GGGGGAACGCGAACACCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCGTGC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR GCA 90 bp CCGGACAATATTGGGGTAGTCCACCCACACGGTGTTCGCGTTCCCCCGCGTCCGGCAGCTGGCAGCTGCTaGTGCTTCCATGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PDNIGVVHPHGVRVPPRPAAGSC*CFHATA
Trigger: TGCAGTGGCATGGAAGCAGCAGCAGCTGCCAGCTGC...CGGACGCGGGGGAACGCGAACACCGTGTGGGTGGACTACCCCAATATTGTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp GATGGCCACGGGCCGGTAGCTGAGTGGGGAACCTGCAAAGCTCTCCACCGCCTCTACTCGTGGGAGCCGTaGGAGAAGTTGAGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: DGHGPVAEWGTCKALHRLYSWEP*EKLSRA
Trigger: TGCGCGACTCAACTTCTCCCACGGCTCCCACGAGTA...GAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR GCA 90 bp CACGACCCGGACAATATTGGGGTAGTCCACCCACACGGTGTTCGCGTTCCCCCGGCTGAGTGGGGAACCTaGAAAGCTCTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: HDPDNIGVVHPHGVRVPPAEWGT*KALHRL
Trigger: GAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGC...CGGGGGAACGCGAACACCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp GATCATCTCCTTGAGGCGCTCCACGGAGCGAGATGCTGGCCCGATGGTGGCAATCCGCCTCCCGGACGTTaGCGATGGACTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: DHLLEALHGARCWPDGGNPPPGR*RWTQHG
Trigger: ACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGG...ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAGCGCCTCAAGGAGATGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp CCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGGCAGGAGGAGCACCTGGCGGGCAGCCTaGGCAGAGCGGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: PNPSAQYLNLLPGRGRRSTWRAA*AERVTA
Trigger: TGCTGTCACCCGCTCTGCCCAGGCTGCCCGCCAGGT...GCTCCTCCTGCCCCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACCTGGCGGGCAGCCTaGGCAGAGCGGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDTWRAA*AERVTA
Trigger: TGCTGTCACCCGCTCTGCCCAGGCTGCCCGCCAGGT...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGACCCAGAGCAGCCCTaGCGGCAGCCACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQDPEQP*RQPRRW
Trigger: CCAGCGACGTGGCTGCCGTCAGGGCTGCTCTGGGTC...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGGACCCAGAGCAGCCCTaGCGGCAGCCACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVDPEQP*RQPRRW
Trigger: CCAGCGACGTGGCTGCCGTCAGGGCTGCTCTGGGTC...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGACCCAGAGCAGCCCTaGCGGCAGCCACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPDPEQP*RQPRRW
Trigger: CCAGCGACGTGGCTGCCGTCAGGGCTGCTCTGGGTC...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGTCACGCCCTTCCGGCTaGCCAGGACGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGSRPSG*PGRRRS
Trigger: AGAACGGCGGCGTCCTGGGCAGCCGGAAGGGCGTGA...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAAGCTCCTGGGTCAGTTaGGCCACACTGGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTSSWVS*ATLARR
Trigger: GCGGCGGGCCAGTGTGGCCCAACTGACCCAGGAGCT...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCTGAGTGGGGAACCTGCAAAGCTCTCCACCGCCTCCCGGACGTTGGCGATGGATCAGCATGGTACTCGTaGGAGCCGTGGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AEWGTCKALHRLPDVGDGSAWYS*EPWEKL
Trigger: CAACTTCTCCCACGGCTCCCACGAGTACCATGCTGA...TCCATCGCCAACGTCCGGGAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp GCACGACCCGGACAATATTGGGGTAGTCCACCCACACGGTGTTCGCGTTCCCCCCGACCCGGACAATATTaGGGTAGTCCACCCACACGG +
Preference number: 4 (lower is better)
Translates to: ARPGQYWGSPPTRCSRSPRPGQY*GSPPTR
Trigger: CCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCG...GGGGGAACGCGAACACCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCGTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGCCGGGCAAGTCCACCTaGGCCCCTGGCAAGTTCACG +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGPGKST*APGKFT
Trigger: CGTGAACTTGCCAGGGGCCCAGGTGGACTTGCCCGG...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGCCGGGCAAGTCCACCTaGGCCCCTGGCAAGTTCACG +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVPGKST*APGKFT
Trigger: CGTGAACTTGCCAGGGGCCCAGGTGGACTTGCCCGG...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR CAA 72 bp AGTCGCGCAATGTTCATCCCGGCCTTGATCATCTCCTaGAGGCGCTCCACGGAGCGAGATGCTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: SRAMFIPALIIS*RRSTERDAGPM
Trigger: CATCGGGCCAGCATCTCGCTCCGTGGAGCGCCTCAAGGAGATGATCAAGGCCGGGATGAACATTGCGCGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR TCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGCCACGGGCCGGTAGCTaGGTGGGGAACCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGPRAGS*VGNLQS
Trigger: GCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGG...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCCTGCAGGATCCCAGTaGGGATCTCCGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDPAGSQ*GSPVPW
Trigger: CCAAGGGACCGGAGATCCGCACTGGGATCCTGCAGG...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGTCACGCCCTTCCGGCTaGCCAGGACGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVSRPSG*PGRRRS
Trigger: AGAACGGCGGCGTCCTGGGCAGCCGGAAGGGCGTGA...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGGTCTCGGACGTCCTaGTCGGACAGCCCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGRSRTS*SDSPGK
Trigger: CTTGCCCGGGCTGTCCGAGCAGGACGTCCGAGACCT...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGGTACACTGCGGCCTCTaGCTCCCGGGCAATCGCATG +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGVHCGL*LPGNRM
Trigger: CATGCGATTGCCCGGGAGGCAGAGGCCGCAGTGTAC...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGACCGCAGATACCCCGCTaGCCCTCCTGGAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGPQIPR*PSWSPN
Trigger: ATTGGGGCTCCAGGAGGGCCAGCGGGGTATCTGCGG...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAGCTCCTGGGTCAGTTaGGCCACACTGGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVSSWVS*ATLARR
Trigger: GCGGCGGGCCAGTGTGGCCCAACTGACCCAGGAGCT...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCCGCCGTTCTCCACTTaGGTCACCAGTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDPPFST*VTSPSG
Trigger: CCCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGG...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACGGCATAAGTGGACCTaGCGGGCAGCCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTRHKWT*RAAWAE
Trigger: CTCTGCCCAGGCTGCCCGCCAGGTCCACTTATGCCG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACGGCATGAGGCCCAGCTaGGCTGGGGATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDGMRPS*AGDQFC
Trigger: GCAGAACTGATCCCCAGCCCAGCTGGGCCTCATGCC...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GATCATCTCCTTGAGGCGCTCCACGGAGCGAGATGCTGGCCCGATGGTGGCAATCACTGCACACCTCTCTaGGTCTCCCTCTCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: DHLLEALHGARCWPDGGNHCTPL*VSLSVG
Trigger: ACCCACAGAGAGGGAGACCCAGAGAGGTGTGCAGTG...ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAGCGCCTCAAGGAGATGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR TCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGGCCCGATGGTGGCAATaGTGCTGGTACTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVARWWQ*CWYCEQ
Trigger: CTGCTCGCAGTACCAGCATCATTGCCACCATCGGGC...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGACCCAGAGCAGCCCTaGCGGCAGCCACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTDPEQP*RQPRRW
Trigger: CCAGCGACGTGGCTGCCGTCAGGGCTGCTCTGGGTC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp AGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAAGCAGCACCAATGGCGGTaGCCTCAGTGGGATCACGGC +
Preference number: 4 (lower is better)
Translates to: SLLSFWVGSSGVLGVWEKQHQWR*PQWDHG
Trigger: GCCGTGATCCCACTGAGGTCACCGCCATTGGTGCTG...CTTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR TCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGAGACAGAAGCTGGGCTaGGCGGCCAGTTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVRQKLG*AASCGQ
Trigger: CTGACCACAACTGGCCGCTCAGCCCAGCTTCTGTCT...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATAGGTCTCGGACGTCCTaGTCGGACAGCCCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDRSRTS*SDSPGK
Trigger: CTTGCCCGGGCTGTCCGAGCAGGACGTCCGAGACCT...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAACGATGTCCACCCCATaGTCCACCCCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTTMSTP*STPKRR
Trigger: CCTGCGCTTCGGGGTGGAGCATGGGGTGGACATCGT...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACGACATCGCTTGTCTCTaGCCTCGTTGGCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDDIACL*PRWPGL
Trigger: AAGCCCCGGCCAACGAGGGCAGAGACAAGCGATGTC...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCAGTACACTGCGGCCTCTaGCTCCCGGGCAATCGCATG +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPVHCGL*LPGNRM
Trigger: CATGCGATTGCCCGGGAGGCAGAGGCCGCAGTGTAC...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGAGCTCCTCAAACAGCTaGCGGTGGTACACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVSSSNS*RWYTAA
Trigger: GGCCGCAGTGTACCACCGGCAGCTGTTTGAGGAGCT...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGGCAGGAGGAGCGGTGACAGCAATGACTaGTGCCCGAGGTCGGTACCG +
Preference number: 4 (lower is better)
Translates to: PNPSAQYLNLLPGRGRRSGDSND*CPRSVP
Trigger: CGGTACCGACCTCGGGCAGCAGTCATTGCTGTCACC...GCTCCTCCTGCCCCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCCGCAGATACCCCGCTaGCCCTCCTGGAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQPQIPR*PSWSPN
Trigger: ATTGGGGCTCCAGGAGGGCCAGCGGGGTATCTGCGG...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGGCGATGGACTCAGCATaGTACTCGTGGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGAMDSA*YSWEPW
Trigger: CCACGGCTCCCACGAGTACCATGCTGAGTCCATCGC...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCACCGCCTCCCGGACGTTaGCGATGGACTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPPPPGR*RWTQHG
Trigger: ACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGG...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCAGGATCTCCGGTCCCTTaGTGTCCAGGGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPGSPVP*CPGRWP
Trigger: TGGCCATCGCCCTGGACACCAAGGGACCGGAGATCC...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCCGGGCAAGTCCACCTaGGCCCCTGGCAAGTTCACG +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQPGKST*APGKFT
Trigger: CGTGAACTTGCCAGGGGCCCAGGTGGACTTGCCCGG...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAACTCCTCGGCATAAGTaGACCTGGCGGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGTPRHK*TWRAAW
Trigger: CCAGGCTGCCCGCCAGGTCCACTTATGCCGAGGAGT...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGCTGGGGAGGAAGGGATaGGGTACAAGGGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGLGRKG*GTRVGW
Trigger: CCAGCCTACCCTTGTACCCCATCCCTTCCTCCCCAG...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACCTGGGGAGGAAGGGATaGGGTACAAGGGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDLGRKG*GTRVGW
Trigger: CCAGCCTACCCTTGTACCCCATCCCTTCCTCCCCAG...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGCAAGGTATCCAAGCCTaGGGAAGGGCAGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGQGIQA*GRAGQP
Trigger: TGGCTGGCCTGCCCTTCCCCAGGCTTGGATACCTTG...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACCGCAGATACCCCGCTaGCCCTTCCATGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTPQIPR*PFHATA
Trigger: TGCAGTGGCATGGAAGGGCCAGCGGGGTATCTGCGG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp AGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAAGAGACAGAAGCTGGGCTaGGCGGCCAGTTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLLSFWVGSSGVLGVWEKRQKLG*AASCGQ
Trigger: CTGACCACAACTGGCCGCTCAGCCCAGCTTCTGTCT...CTTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR TCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAAGACAGAAGCTGGGCTaGGCGGCCAGTTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTRQKLG*AASCGQ
Trigger: CTGACCACAACTGGCCGCTCAGCCCAGCTTCTGTCT...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACAAGCAGCCGGGGATTTaGCCAAGCAGGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDKQPGI*PSRVSG
Trigger: GCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTT...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACTCCACGGAGCGAGATaGTGGCCCGATGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTLHGAR*WPDGGN
Trigger: ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGCTGAGTGGGGAACCTaGAAAGCTCTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGAEWGT*KALHRL
Trigger: GAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGC...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCCTGCAGGATCCCAGTaGGGATCTCCGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQPAGSQ*GSPVPW
Trigger: CCAAGGGACCGGAGATCCGCACTGGGATCCTGCAGG...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGATCACGCCCTTCCGGCTaGCCAGGACGCCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRSRPSG*PGRRRS
Trigger: AGAACGGCGGCGTCCTGGGCAGCCGGAAGGGCGTGA...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAGGTCTCGGACGTCCTaGTCGGACAGCCCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHRSRTS*SDSPGK
Trigger: CTTGCCCGGGCTGTCCGAGCAGGACGTCCGAGACCT...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGACGATGTCCACCCCATaGTCCACCCCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVTMSTP*STPKRR
Trigger: CCTGCGCTTCGGGGTGGAGCATGGGGTGGACATCGT...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCACACAGACAACAGGCTTaGCCGCCAAGTTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPHRQQA*PPSCSA
Trigger: GGCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTG...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGGACATCGCTTGTCTCTaGCCTCGTTGGCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGDIACL*PRWPGL
Trigger: AAGCCCCGGCCAACGAGGGCAGAGACAAGCGATGTC...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTCAGTTGGGCCACACTaGCCCGCCGCAGATACCCCG +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHSVGPH*PAADTP
Trigger: CGGGGTATCTGCGGCGGGCCAGTGTGGCCCAACTGA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAAGGCGATGGACTCAGCATaGTACTCGTGGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SLLSFWVGSSGVLGVWEKAMDSA*YSWEPW
Trigger: CCACGGCTCCCACGAGTACCATGCTGAGTCCATCGC...CTTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGCGATGGACTCAGCATaGTACTCGTGGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTAMDSA*YSWEPW
Trigger: CCACGGCTCCCACGAGTACCATGCTGAGTCCATCGC...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACCCCGGACGTTGGCGATaGACTCAGCATGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDPGRWR*TQHGTR
Trigger: ACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGG...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGCCGCCTCCCGGACGTTaGCGATGGACTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVPPPGR*RWTQHG
Trigger: ACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGG...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGGATCTCCGGTCCCTTaGTGTCCAGGGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQGSPVP*CPGRWP
Trigger: TGGCCATCGCCCTGGACACCAAGGGACCGGAGATCC...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCGACCCGGACAATATTaGGGTAGTCCACCCACACGG +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDRPGQY*GSPPTR
Trigger: CCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCG...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGGGTCACCAGTCCCTCTaGGCCGATTTTCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGGHQSL*ADFLDH
Trigger: GTGGTCCAGAAAATCGGCCCAGAGGGACTGGTGACC...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATGTCCACCTGGGCCCCTaGCAAGTTCACGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHVHLGP*QVHALP
Trigger: CGGAAGGGCGTGAACTTGCCAGGGGCCCAGGTGGAC...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AGCCTCTGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCACGGCAGCCACGTCGCTaGCTTTCCGCACAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLCGPCPNPSAQYLNLLPRQPRR*LSAQRR
Trigger: CCTCCTTTGTGCGGAAAGCCAGCGACGTGGCTGCCG...TGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGATCAAACAGCTGCCGGTaGTACACTGCGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGSNSCR*YTAASA
Trigger: GGCAGAGGCCGCAGTGTACCACCGGCAGCTGTTTGA...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACTACCGAGACAGAAGCTaGGCTGAGCGGCCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDYRDRS*AERPVV
Trigger: CACAACTGGCCGCTCAGCCCAGCTTCTGTCTCGGTA...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTACCTGGCGGGCAGCCTaGGCAGAGCGGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPTWRAA*AERVTA
Trigger: TGCTGTCACCCGCTCTGCCCAGGCTGCCCGCCAGGT...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGACTCCTCGGCATAAGTaGACCTGGCGGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQTPRHK*TWRAAW
Trigger: CCAGGCTGCCCGCCAGGTCCACTTATGCCGAGGAGT...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGCTGGGGAGGAAGGGATaGGGTACAAGGGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGLGRKG*GTRVGW
Trigger: CCAGCCTACCCTTGTACCCCATCCCTTCCTCCCCAG...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACGGCTTTGGAGGGGTGTaGGCTGGAGAACGTAGACTG +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDGFGGV*AGERRL
Trigger: CAGTCTACGTTCTCCAGCCCACACCCCTCCAAAGCC...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGAGCAGCCAGGACAGTaGTCTACAAGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGEQPGQ*STSPAR
Trigger: CCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTC...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCACTGCACACCTCTCTaGGTCTCCCTCTCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDHCTPL*VSLSVG
Trigger: ACCCACAGAGAGGGAGACCCAGAGAGGTGTGCAGTG...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
3UTR CAA 72 bp GGAGGCAGGGCCTCTCCATGCCAGCCTCTGTGGTCCTaGCCCAAACCCATCAGCGCAATACTTGAACCTTCT +
Preference number: 4 (lower is better)
Translates to: GGRASPCQPLWS*PKPISAILEPS
Trigger: AGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCTGGCATGGAGAGGCCCTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR TCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGGCCCGATGGTGGCAATaGTGCTGGTACTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVARWWQ*CWYCEQ
Trigger: CTGCTCGCAGTACCAGCATCATTGCCACCATCGGGC...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACGGACCACTAGGGAGATaGGCCCGTCGTCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDGPLGR*ARRQCR
Trigger: TCTACATTGACGACGGGCTCATCTCCCTAGTGGTCC...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACCATCTTAGGGCCTGCTaGGCAGATTGGATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDHLRAC*ADWMQG
Trigger: TCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATG...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAAAGCAGCCGGGGATTTaGCCAAGCAGGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGKQPGI*PSRVSG
Trigger: GCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTT...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGGCTGAGTGGGGAACCTaGAAAGCTCTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVAEWGT*KALHRL
Trigger: GAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGC...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGCTGAGTGGGGAACCTaGAAAGCTCTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQAEWGT*KALHRL
Trigger: GAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGC...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATCCTGCAGGATCCCAGTaGGGATCTCCGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHPAGSQ*GSPVPW
Trigger: CCAAGGGACCGGAGATCCGCACTGGGATCCTGCAGG...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACCTGCAGGATCCCAGTaGGGATCTCCGGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRPAGSQ*GSPVPW
Trigger: CCAAGGGACCGGAGATCCGCACTGGGATCCTGCAGG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGGCTTGCCCGCCAAGTTaGAGCGCCCAATCATCATCT +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVACPPS*SAQSSS
Trigger: AGATGATGATTGGGCGCTGCAACTTGGCGGGCAAGC...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCACACAGACAACAGGCTTaGCCGCCAAGTTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPHRQQA*PPSCSA
Trigger: GGCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTG...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGACATCGCTTGTCTCTaGCCTCGTTGGCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CGPCPNPSAQYLNLLPGRDIACL*PRWPGL
Trigger: AAGCCCCGGCCAACGAGGGCAGAGACAAGCGATGTC...CCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR GCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGACATCGCTTGTCTCTaGCCTCGTTGGCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPDIACL*PRWPGL
Trigger: AAGCCCCGGCCAACGAGGGCAGAGACAAGCGATGTC...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCACTTCCACAGGGAAGTTaGCCTTGGCAGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPLPQGS*PWQSPL
Trigger: CAGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAG...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGGTGACAGCAATGACTaGTGCCCGAGGTCGGTACCG +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDGDSND*CPRSVP
Trigger: CGGTACCGACCTCGGGCAGCAGTCATTGCTGTCACC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACTGCCCTGGCACGAGATaGCCAGATTATCATGAGGGC +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDCPGTR*PDYHEG
Trigger: GCCCTCATGATAATCTGGGCATCTCGTGCCAGGGCA...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCTTTCAGTGTGGGCCTaGGGCTGCGGGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQLSVWA*GCGTME
Trigger: TTCCATGGTCCCGCAGCCCCAGGCCCACACTGAAAG...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATCAGTTGGGCCACACTaGCCCGCCGCAGATACCCCG +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRSVGPH*PAADTP
Trigger: CGGGGTATCTGCGGCGGGCCAGTGTGGCCCAACTGA...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGATCAGTTGGGCCACACTaGCCCGCCGCAGATACCCCG +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRSVGPH*PAADTP
Trigger: CGGGGTATCTGCGGCGGGCCAGTGTGGCCCAACTGA...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTAGCTCCTGGGTCAGTTaGGCCACACTGGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECSSWVS*ATLARR
Trigger: GCGGCGGGCCAGTGTGGCCCAACTGACCCAGGAGCT...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACTCAGCATGGTACTCGTaGGAGCCGTGGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDSAWYS*EPWEKL
Trigger: CAACTTCTCCCACGGCTCCCACGAGTACCATGCTGA...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGTCAGCATGGTACTCGTaGGAGCCGTGGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVSAWYS*EPWEKL
Trigger: CAACTTCTCCCACGGCTCCCACGAGTACCATGCTGA...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGGGCCGGTAGCTGAGTaGGGAACCTGCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDGPVAE*GTCKAL
Trigger: GAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGGCCGGTAGCTGAGTaGGGAACCTGCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPGPVAE*GTCKAL
Trigger: GAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCC...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATGGATCTCCGGTCCCTTaGTGTCCAGGGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHGSPVP*CPGRWP
Trigger: TGGCCATCGCCCTGGACACCAAGGGACCGGAGATCC...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTCCACCTGGGCCCCTaGCAAGTTCACGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPVHLGP*QVHALP
Trigger: CGGAAGGGCGTGAACTTGCCAGGGGCCCAGGTGGAC...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCCGGGCAAGTCCACCTaGGCCCCTGGCAAGTTCACG +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPPGKST*APGKFT
Trigger: CGTGAACTTGCCAGGGGCCCAGGTGGACTTGCCCGG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACTGTCTCTGCCCTCGTTaGCCGGGGCTTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDCLCPR*PGLGNH
Trigger: ATGATTACCAAGCCCCGGCCAACGAGGGCAGAGACA...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACTGTCTCTGCCCTCGTTaGCCGGGGCTTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDCLCPR*PGLGNH
Trigger: ATGATTACCAAGCCCCGGCCAACGAGGGCAGAGACA...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTCAAACAGCTGCCGGTaGTACACTGCGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQSNSCR*YTAASA
Trigger: GGCAGAGGCCGCAGTGTACCACCGGCAGCTGTTTGA...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTCGGCATAAGTGGACCTaGCGGGCAGCCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGRHKWT*RAAWAE
Trigger: CTCTGCCCAGGCTGCCCGCCAGGTCCACTTATGCCG...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACGGCATAAGTGGACCTaGCGGGCAGCCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRRHKWT*RAAWAE
Trigger: CTCTGCCCAGGCTGCCCGCCAGGTCCACTTATGCCG...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACCTGGAGAACGTAGACTaGGGAGGAAGGGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDLENVD*GGRDGV
Trigger: TACCCCATCCCTTCCTCCCCAGTCTACGTTCTCCAG...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCAGGCTTTGGAGGGGTGTaGGCTGGAGAACGTAGACTG +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPGFGGV*AGERRL
Trigger: CAGTCTACGTTCTCCAGCCCACACCCCTCCAAAGCC...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGCCTCTGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGAGCAGCCAGGACAGTaGTCTACAAGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SLCGPCPNPSAQYLNLLPEQPGQ*STSPAR
Trigger: CCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTC...TGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATGGCATGAGGCCCAGCTaGGCTGGGGATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHGMRPS*AGDQFC
Trigger: GCAGAACTGATCCCCAGCCCAGCTGGGCCTCATGCC...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGGGTCTCCCTCTCTGTaGGTCTGCTCCACACTGTTG +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTGSPSL*VCSTLL
Trigger: CAACAGTGTGGAGCAGACCCACAGAGAGGGAGACCC...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
3UTR CAA 72 bp GACTCAGCATGGTACTCGTGGGAGCCGTGGGAGAAGTaGAGTCGCGCAATGTTCATCCCGGCCTTGATCATC +
Preference number: 4 (lower is better)
Translates to: DSAWYSWEPWEK*SRAMFIPALII
Trigger: GATGATCAAGGCCGGGATGAACATTGCGCGACTCAACTTCTCCCACGGCTCCCACGAGTACCATGCTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR TCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGCCCGATGGTGGCAATaGTGCTGGTACTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRARWWQ*CWYCEQ
Trigger: CTGCTCGCAGTACCAGCATCATTGCCACCATCGGGC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCCACGGGCCGGTAGCTaGGTGGGGAACCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLPRAGS*VGNLQS
Trigger: GCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTCCACGGGCCGGTAGCTaGGTGGGGAACCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECPRAGS*VGNLQS
Trigger: GCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGG...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGGACCACTAGGGAGATaGGCCCGTCGTCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTGPLGR*ARRQCR
Trigger: TCTACATTGACGACGGGCTCATCTCCCTAGTGGTCC...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGGGACCACTAGGGAGATaGGCCCGTCGTCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGGPLGR*ARRQCR
Trigger: TCTACATTGACGACGGGCTCATCTCCCTAGTGGTCC...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGTCTCCCCTGACAGCATaGTGCAGTCAGCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVSPLTA*CSQPHP
Trigger: TGGATGGGGCTGACTGCATCATGCTGTCAGGGGAGA...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGACAGCACCAATGGCGGTaGCCTCAGTGGGATCACGGC +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRQHQWR*PQWDHG
Trigger: GCCGTGATCCCACTGAGGTCACCGCCATTGGTGCTG...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACAGCACCAATGGCGGTaGCCTCAGTGGGATCACGGC +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTQHQWR*PQWDHG
Trigger: GCCGTGATCCCACTGAGGTCACCGCCATTGGTGCTG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATTGCTTAGCACCCGCATaGTGTTGGTGTAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDCLAPA*CWCSRS
Trigger: GCTCCGGCTACACCAACATCATGCGGGTGCTAAGCA...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCTTTCAGGACCTGTGTaGAATGGAGATGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDLSGPV*NGDGEG
Trigger: CCCTTCCCCATCTCCATTTCACACAGGTCCTGAAAG...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGCATCAGCGCAATACTTaGACCTTCTCCCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVHQRNT*TFSQVG
Trigger: CCCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATG...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR GCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATCTCCACGGAGCGAGATaGTGGCCCGATGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHLHGAR*WPDGGN
Trigger: ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAG...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTAGGTCTCGGACGTCCTaGTCGGACAGCCCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLRSRTS*SDSPGK
Trigger: CTTGCCCGGGCTGTCCGAGCAGGACGTCCGAGACCT...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGCTTCCACAGGGAAGTTaGCCTTGGCAGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVLPQGS*PWQSPL
Trigger: CAGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAG...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCACTTCCACAGGGAAGTTaGCCTTGGCAGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPLPQGS*PWQSPL
Trigger: CAGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAG...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCACGGGCAATCGCATGCTaGATCTTCACCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPRAIAC*IFTAST
Trigger: TGTGGAAGCGGTGAAGATGCAGCATGCGATTGCCCG...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACGGGCAATCGCATGCTaGATCTTCACCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTRAIAC*IFTAST
Trigger: TGTGGAAGCGGTGAAGATGCAGCATGCGATTGCCCG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCATCCCGGGCAATCGCATaGTGCATCTTCACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPSRAIA*CIFTAS
Trigger: GGAAGCGGTGAAGATGCAGCATGCGATTGCCCGGGA...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTACACTGCGGCCTCTaGCTCCCGGGCAATCGCATG +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPVHCGL*LPGNRM
Trigger: CATGCGATTGCCCGGGAGGCAGAGGCCGCAGTGTAC...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGACAGCAATGACTGCTaGCCGAGGTCGGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDDSNDC*PRSVPR
Trigger: TCTCGGTACCGACCTCGGGCAGCAGTCATTGCTGTC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACATGAAGGGGTAGCCTaGCCTGGCACGAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRHEGVA*PGTRCP
Trigger: TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTCCCCGCTGGCCCTCCTaGAGCCCCAATCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECPRWPS*SPNQDG
Trigger: TCCATCCTGATTGGGGCTCCAGGAGGGCCAGCGGGG...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGCTCCTGGGTCAGTTaGGCCACACTGGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFSSWVS*ATLARR
Trigger: GCGGCGGGCCAGTGTGGCCCAACTGACCCAGGAGCT...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGTCTGCCATAGCAGCTaGCAGCTGCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQVCHSS*QLLLLE
Trigger: TTCCAGCAGCAGCAGCTGCCAGCTGCTATGGCAGAC...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGTACTCGTGGGAGCCGTaGGAGAAGTTGAGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVYSWEP*EKLSRA
Trigger: TGCGCGACTCAACTTCTCCCACGGCTCCCACGAGTA...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCATACTCGTGGGAGCCGTaGGAGAAGTTGAGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPYSWEP*EKLSRA
Trigger: TGCGCGACTCAACTTCTCCCACGGCTCCCACGAGTA...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTACTCGTGGGAGCCGTaGGAGAAGTTGAGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQYSWEP*EKLSRA
Trigger: TGCGCGACTCAACTTCTCCCACGGCTCCCACGAGTA...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCCGCCTCCCGGACGTTaGCGATGGACTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPPPPGR*RWTQHG
Trigger: ACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATGGGCCGGTAGCTGAGTaGGGAACCTGCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHGPVAE*GTCKAL
Trigger: GAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCC...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCGACCCGGACAATATTaGGGTAGTCCACCCACACGG +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQRPGQY*GSPPTR
Trigger: CCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCG...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACCGCCGTTCTCCACTTaGGTCACCAGTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRPPFST*VTSPSG
Trigger: CCCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGG...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCCGCCGTTCTCCACTTaGGTCACCAGTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPPPFST*VTSPSG
Trigger: CCCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCGGCAGCCACGTCGCTaGCTTTCCGCACAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPRQPRR*LSAQRR
Trigger: CCTCCTTTGTGCGGAAAGCCAGCGACGTGGCTGCCG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCATCCAGCACAGCATTaGCGACATCGCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDHPAQH*RHRLSL
Trigger: CAGAGACAAGCGATGTCGCCAATGCTGTGCTGGATG...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCATACCGAGACAGAAGCTaGGCTGAGCGGCCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPYRDRS*AERPVV
Trigger: CACAACTGGCCGCTCAGCCCAGCTTCTGTCTCGGTA...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCACCTGGCGGGCAGCCTaGGCAGAGCGGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFTWRAA*AERVTA
Trigger: TGCTGTCACCCGCTCTGCCCAGGCTGCCCGCCAGGT...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCGGCATAAGTGGACCTaGCGGGCAGCCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLRHKWT*RAAWAE
Trigger: CTCTGCCCAGGCTGCCCGCCAGGTCCACTTATGCCG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAACTCCTCGGCATAAGTaGACCTGGCGGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTTPRHK*TWRAAW
Trigger: CCAGGCTGCCCGCCAGGTCCACTTATGCCGAGGAGT...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTACTCCTCGGCATAAGTaGACCTGGCGGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGTPRHK*TWRAAW
Trigger: CCAGGCTGCCCGCCAGGTCCACTTATGCCGAGGAGT...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACCATCATCTGCCCAGATaGCTTCTGGAGGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: HESSQDSGLQAQHGGCEDHHLPR*LLEVHG
Trigger: ACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATG...GTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACAGGACCTGTGTGAAATaGAGATGGGGAAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDRTCVK*RWGRGN
Trigger: GTTGCCCCTTCCCCATCTCCATTTCACACAGGTCCT...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AAGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAACTGGGTGGGGAGTTCTaGGGTTCTTGGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KSPFLLGGEFWGSWCVGELGGEF*GSWCVG
Trigger: TCCCACACACCAAGAACCCCAGAACTCCCCACCCAG...TTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp AAGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAACCATGCCAGCCTCTGTaGTCCTTGCCCAAACCCATC +
Preference number: 4 (lower is better)
Translates to: KSPFLLGGEFWGSWCVGEPCQPL*SLPKPI
Trigger: GATGGGTTTGGGCAAGGACCACAGAGGCTGGCATGG...TTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR TCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGCCCGATGGTGGCAATaGTGCTGGTACTGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRARWWQ*CWYCEQ
Trigger: CTGCTCGCAGTACCAGCATCATTGCCACCATCGGGC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGACCACGGGCCGGTAGCTaGGTGGGGAACCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRPRAGS*VGNLQS
Trigger: GCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGG...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGTTGTGGTCAGCACAATaGTGGCAGCAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGLWSAQ*WQQHST
Trigger: AGTGCTGTGCTGCTGCCATCATTGTGCTGACCACAA...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTAGACAGAAGCTGGGCTaGGCGGCCAGTTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGRQKLG*AASCGQ
Trigger: CTGACCACAACTGGCCGCTCAGCCCAGCTTCTGTCT...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAGGTATCAGGCAGGCATaGGAGCAGCCAGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRGIRQA*EQPGQW
Trigger: CCACTGTCCTGGCTGCTCTCATGCCTGCCTGATACC...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGGTATCAGGCAGGCATaGGAGCAGCCAGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRGIRQA*EQPGQW
Trigger: CCACTGTCCTGGCTGCTCTCATGCCTGCCTGATACC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGCTGAGTGGGGAACCTaGAAAGCTCTCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTAEWGT*KALHRL
Trigger: GAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTACGATGTCCACCCCATaGTCCACCCCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLTMSTP*STPKRR
Trigger: CCTGCGCTTCGGGGTGGAGCATGGGGTGGACATCGT...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGCTTGCCCGCCAAGTTaGAGCGCCCAATCATCATCT +
Preference number: 4 (lower is better)
Translates to: CGPCPNPSAQYLNLLPGRACPPS*SAQSSS
Trigger: AGATGATGATTGGGCGCTGCAACTTGGCGGGCAAGC...CCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR GCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGCTTGCCCGCCAAGTTaGAGCGCCCAATCATCATCT +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDACPPS*SAQSSS
Trigger: AGATGATGATTGGGCGCTGCAACTTGGCGGGCAAGC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGACACAGACAACAGGCTTaGCCGCCAAGTTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRHRQQA*PPSCSA
Trigger: GGCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTG...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTCACAGACAACAGGCTTaGCCGCCAAGTTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGHRQQA*PPSCSA
Trigger: GGCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTG...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATCTTCCACAGGGAAGTTaGCCTTGGCAGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHLPQGS*PWQSPL
Trigger: CAGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAG...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGATCCCGGGCAATCGCATaGTGCATCTTCACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRSRAIA*CIFTAS
Trigger: GGAAGCGGTGAAGATGCAGCATGCGATTGCCCGGGA...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTAGCTCCTCAAACAGCTaGCGGTGGTACACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGSSSNS*RWYTAA
Trigger: GGCCGCAGTGTACCACCGGCAGCTGTTTGAGGAGCT...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAAGCTCCTCAAACAGCTaGCGGTGGTACACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRSSSNS*RWYTAA
Trigger: GGCCGCAGTGTACCACCGGCAGCTGTTTGAGGAGCT...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAAGCTCCTCAAACAGCTaGCGGTGGTACACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRSSSNS*RWYTAA
Trigger: GGCCGCAGTGTACCACCGGCAGCTGTTTGAGGAGCT...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGGTGACAGCAATGACTaGTGCCCGAGGTCGGTACCG +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRGDSND*CPRSVP
Trigger: CGGTACCGACCTCGGGCAGCAGTCATTGCTGTCACC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGGTGACAGCAATGACTaGTGCCCGAGGTCGGTACCG +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPGDSND*CPRSVP
Trigger: CGGTACCGACCTCGGGCAGCAGTCATTGCTGTCACC...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGACTGTGGACAAGATTaGCCTGTCTCCCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRDCGQD*PVSPLP
Trigger: GGGGAGAGGGGAGACAGGGCAATCTTGTCCACAGTC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCATGCCCTGGCACGAGATaGCCAGATTATCATGAGGGC +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPCPGTR*PDYHEG
Trigger: GCCCTCATGATAATCTGGGCATCTCGTGCCAGGGCA...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTGACATGCTTTCAGTGTaGGCCTGGGGCTGCGGGACC +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLDMLSV*AWGCGT
Trigger: GGTCCCGCAGCCCCAGGCCCACACTGAAAGCATGTC...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGACCCCGCTGGCCCTCCTaGAGCCCCAATCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRPRWPS*SPNQDG
Trigger: TCCATCCTGATTGGGGCTCCAGGAGGGCCAGCGGGG...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGATCAGTTGGGCCACACTaGCCCGCCGCAGATACCCCG +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRSVGPH*PAADTP
Trigger: CGGGGTATCTGCGGCGGGCCAGTGTGGCCCAACTGA...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGTCTGCCATAGCAGCTaGCAGCTGCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRVCHSS*QLLLLE
Trigger: TTCCAGCAGCAGCAGCTGCCAGCTGCTATGGCAGAC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTACTCGTGGGAGCCGTaGGAGAAGTTGAGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHYSWEP*EKLSRA
Trigger: TGCGCGACTCAACTTCTCCCACGGCTCCCACGAGTA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGTCAGCATGGTACTCGTaGGAGCCGTGGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVSAWYS*EPWEKL
Trigger: CAACTTCTCCCACGGCTCCCACGAGTACCATGCTGA...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGCGATGGACTCAGCATaGTACTCGTGGGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRAMDSA*YSWEPW
Trigger: CCACGGCTCCCACGAGTACCATGCTGAGTCCATCGC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACCCGGACGTTGGCGATaGACTCAGCATGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRPGRWR*TQHGTR
Trigger: ACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGCCGCCTCCCGGACGTTaGCGATGGACTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWPPPGR*RWTQHG
Trigger: ACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGG...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGGGCCGGTAGCTGAGTaGGGAACCTGCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGGPVAE*GTCKAL
Trigger: GAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGCCGCCGTTCTCCACTTaGGTCACCAGTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWPPFST*VTSPSG
Trigger: CCCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGG...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCGTCCACCTGGGCCCCTaGCAAGTTCACGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFVHLGP*QVHALP
Trigger: CGGAAGGGCGTGAACTTGCCAGGGGCCCAGGTGGAC...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTGTCCACCTGGGCCCCTaGCAAGTTCACGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSVHLGP*QVHALP
Trigger: CGGAAGGGCGTGAACTTGCCAGGGGCCCAGGTGGAC...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGCGGCAGCCACGTCGCTaGCTTTCCGCACAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWRQPRR*LSAQRR
Trigger: CCTCCTTTGTGCGGAAAGCCAGCGACGTGGCTGCCG...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGATCTCCAGCATCTGTGTaGCACAGACAACAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGSPASV*HRQQAC
Trigger: GCAAGCCTGTTGTCTGTGCCACACAGATGCTGGAGA...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCACATCCAGCACAGCATTaGCGACATCGCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPHPAQH*RHRLSL
Trigger: CAGAGACAAGCGATGTCGCCAATGCTGTGCTGGATG...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACAGGGAAGTTGCCCTTaGCAGTCTCCCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRQGSCP*QSPLTA
Trigger: TGCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGATCAAACAGCTGCCGGTaGTACACTGCGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRSNSCR*YTAASA
Trigger: GGCAGAGGCCGCAGTGTACCACCGGCAGCTGTTTGA...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACTGGGGAGGAAGGGATaGGGTACAAGGGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTLGRKG*GTRVGW
Trigger: CCAGCCTACCCTTGTACCCCATCCCTTCCTCCCCAG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGCTGGAGAACGTAGACTaGGGAGGAAGGGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVLENVD*GGRDGV
Trigger: TACCCCATCCCTTCCTCCCCAGTCTACGTTCTCCAG...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAAGGGGTAGCCTGCCCTaGCACGAGATGCCCAGATTA +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRRGSLP*HEMPRL
Trigger: TAATCTGGGCATCTCGTGCCAGGGCAGGCTACCCCT...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGAGCAGCCAGGACAGTaGTCTACAAGCCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPEQPGQ*STSPAR
Trigger: CCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTC...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGGGAAGGAATTTCTaGGTGCAGAAGGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTVGRNF*VQKEAA
Trigger: GGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCAC...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCATCCTTTCCTTCTGGGTaGGGAGTTCTGGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPSFPSG*GVLGFL
Trigger: CAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGA...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAGAGGCCCAGCTGGGCTaGGGATCAGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWREAQLG*GSVLQT
Trigger: AGTCTGCAGAACTGATCCCCAGCCCAGCTGGGCCTC...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGAGGCCCAGCTGGGCTaGGGATCAGTTCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGEAQLG*GSVLQT
Trigger: AGTCTGCAGAACTGATCCCCAGCCCAGCTGGGCCTC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGACAGCACCAATGGCGGTaGCCTCAGTGGGATCACGGC +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRQHQWR*PQWDHG
Trigger: GCCGTGATCCCACTGAGGTCACCGCCATTGGTGCTG...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATTTGTGGTCAGCACAATaGTGGCAGCAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDLWSAQ*WQQHST
Trigger: AGTGCTGTGCTGCTGCCATCATTGTGCTGACCACAA...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACATGCTTAGCACCCGCATaGTGTTGGTGTAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTCLAPA*CWCSRS
Trigger: GCTCCGGCTACACCAACATCATGCGGGTGCTAAGCA...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGATGCTTAGCACCCGCATaGTGTTGGTGTAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRCLAPA*CWCSRS
Trigger: GCTCCGGCTACACCAACATCATGCGGGTGCTAAGCA...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp TGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGCTTTCAGGACCTGTGTaGAATGGAGATGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CGPCPNPSAQYLNLLPGRLSGPV*NGDGEG
Trigger: CCCTTCCCCATCTCCATTTCACACAGGTCCTGAAAG...CCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR TCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCTTTCAGGACCTGTGTaGAATGGAGATGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQLSGPV*NGDGEG
Trigger: CCCTTCCCCATCTCCATTTCACACAGGTCCTGAAAG...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGTGTGTGGGAACAACATaGGTGGGAAGGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGCVGTT*VGRNFW
Trigger: CCAGAAATTCCTTCCCACTCATGTTGTTCCCACACA...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTCTCCTGGATCGACATaGTTTCAGTGTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHSPGST*FQCGPG
Trigger: CCCAGGCCCACACTGAAAGCATGTCGATCCAGGAGA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR GCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGACCCATGACCGAAGCTaGAGGGATGATATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGTHDRS*RDDMFS
Trigger: GGAGAACATATCATCCCTGCAGCTTCGGTCATGGGT...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR GCA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGCTCCACGGAGCGAGATaGTGGCCCGATGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWLHGAR*WPDGGN
Trigger: ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAG...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTCTCCACGGAGCGAGATaGTGGCCCGATGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECLHGAR*WPDGGN
Trigger: ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAG...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCACGATGTCCACCCCATaGTCCACCCCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFTMSTP*STPKRR
Trigger: CCTGCGCTTCGGGGTGGAGCATGGGGTGGACATCGT...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATCGGGCAATCGCATGCTaGATCTTCACCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHRAIAC*IFTAST
Trigger: TGTGGAAGCGGTGAAGATGCAGCATGCGATTGCCCG...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACATCCCGGGCAATCGCATaGTGCATCTTCACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTSRAIA*CIFTAS
Trigger: GGAAGCGGTGAAGATGCAGCATGCGATTGCCCGGGA...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGAGTACACTGCGGCCTCTaGCTCCCGGGCAATCGCATG +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRVHCGL*LPGNRM
Trigger: CATGCGATTGCCCGGGAGGCAGAGGCCGCAGTGTAC...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGGCTTTCCACTTTCAATaGCAAATTGCACCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVAFHFQ*QIAPGD
Trigger: ATCGCCGGGTGCAATTTGGCATTGAAAGTGGAAAGC...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGGCTTTCCACTTTCAATaGCAAATTGCACCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGAFHFQ*QIAPGD
Trigger: ATCGCCGGGTGCAATTTGGCATTGAAAGTGGAAAGC...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTGCCCTGGCACGAGATaGCCAGATTATCATGAGGGC +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHCPGTR*PDYHEG
Trigger: GCCCTCATGATAATCTGGGCATCTCGTGCCAGGGCA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCATGAAGGGGTAGCCTaGCCTGGCACGAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLHEGVA*PGTRCP
Trigger: TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGAGTGACAAAATCAGCTaGCCAGCCCTCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQSDKIS*PALTSP
Trigger: GGGAGAAGTGAGGGCTGGGCAGCTGATTTTGTCACT...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCTTTCAGTGTGGGCCTaGGGCTGCGGGACCATGGAA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLLSVWA*GCGTME
Trigger: TTCCATGGTCCCGCAGCCCCAGGCCCACACTGAAAG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp CCTTCTGAGTTTGCTGTTGGTGCAGGAATAAGGGAAAGGCCCAAGGTATCCAAGCCCGGACGTTGGCGATaGACTCAGCATGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: PSEFAVGAGIRERPKVSKPGRWR*TQHGTR
Trigger: ACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGG...CTTGGATACCTTGGGCCTTTCCCTTATTCCTGCACCAACAGCAAACTCAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACCCGGACGTTGGCGATaGACTCAGCATGGTACTCGT +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRPGRWR*TQHGTR
Trigger: ACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGG...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTGGATCTCCGGTCCCTTaGTGTCCAGGGCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSGSPVP*CPGRWP
Trigger: TGGCCATCGCCCTGGACACCAAGGGACCGGAGATCC...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACGACCCGGACAATATTaGGGTAGTCCACCCACACGG +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTRPGQY*GSPPTR
Trigger: CCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAGGTCACCAGTCCCTCTaGGCCGATTTTCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRGHQSL*ADFLDH
Trigger: GTGGTCCAGAAAATCGGCCCAGAGGGACTGGTGACC...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGGTCACCAGTCCCTCTaGGCCGATTTTCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGGHQSL*ADFLDH
Trigger: GTGGTCCAGAAAATCGGCCCAGAGGGACTGGTGACC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCCGGCAGCCACGTCGCTaGCTTTCCGCACAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFRQPRR*LSAQRR
Trigger: CCTCCTTTGTGCGGAAAGCCAGCGACGTGGCTGCCG...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGTCTCCAGCATCTGTGTaGCACAGACAACAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVSPASV*HRQQAC
Trigger: GCAAGCCTGTTGTCTGTGCCACACAGATGCTGGAGA...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTGTCTCTGCCCTCGTTaGCCGGGGCTTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHCLCPR*PGLGNH
Trigger: ATGATTACCAAGCCCCGGCCAACGAGGGCAGAGACA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCAGGGAAGTTGCCCTTaGCAGTCTCCCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPQGSCP*QSPLTA
Trigger: TGCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTCAGGGAAGTTGCCCTTaGCAGTCTCCCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGQGSCP*QSPLTA
Trigger: TGCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTG...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAAACAGCTGCCGGTaGTACACTGCGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLSNSCR*YTAASA
Trigger: GGCAGAGGCCGCAGTGTACCACCGGCAGCTGTTTGA...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATCTGGAGAACGTAGACTaGGGAGGAAGGGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHLENVD*GGRDGV
Trigger: TACCCCATCCCTTCCTCCCCAGTCTACGTTCTCCAG...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAGGCTTTGGAGGGGTGTaGGCTGGAGAACGTAGACTG +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRGFGGV*AGERRL
Trigger: CAGTCTACGTTCTCCAGCCCACACCCCTCCAAAGCC...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGTGTGTGAAATGGAGATaGGGAAGGGGCAACCTCGAA +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGCVKWR*GRGNLE
Trigger: TTCGAGGTTGCCCCTTCCCCATCTCCATTTCACACA...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATTGGTGCTGTTGGGTaGCCAGTGCATAATTGGACA +
Preference number: 4 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGIGAVG*PVHNWT
Trigger: TGTCCAATTATGCACTGGCCACCCAACAGCACCAAT...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGACAGGGAATGTACAATTaGTGCTGTTGGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGQGMYN*CCWVAS
Trigger: ACTGGCCACCCAACAGCACCAATTGTACATTCCCTG...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGTGGGAAGGAATTTCTaGGTGCAGAAGGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDVGRNF*VQKEAA
Trigger: GGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCAC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACACTGCACACCTCTCTaGGTCTCCCTCTCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTHCTPL*VSLSVG
Trigger: ACCCACAGAGAGGGAGACCCAGAGAGGTGTGCAGTG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTCCGCAGATACCCCGCTaGCCCTTCCATGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSPQIPR*PFHATA
Trigger: TGCAGTGGCATGGAAGGGCCAGCGGGGTATCTGCGG...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
3UTR CAA 72 bp GGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAGTGCATAATTGGACAC +
Preference number: 4 (lower is better)
Translates to: GLLSRLDAGNVQ*VLLGGQCIIGH
Trigger: GTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGGACCACTAGGGAGATaGGCCCGTCGTCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRGPLGR*ARRQCR
Trigger: TCTACATTGACGACGGGCTCATCTCCCTAGTGGTCC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTCCCCTGACAGCATaGTGCAGTCAGCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLSPLTA*CSQPHP
Trigger: TGGATGGGGCTGACTGCATCATGCTGTCAGGGGAGA...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTTGTGGTCAGCACAATaGTGGCAGCAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHLWSAQ*WQQHST
Trigger: AGTGCTGTGCTGCTGCCATCATTGTGCTGACCACAA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTTGCTTAGCACCCGCATaGTGTTGGTGTAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECCLAPA*CWCSRS
Trigger: GCTCCGGCTACACCAACATCATGCGGGTGCTAAGCA...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACATCTTAGGGCCTGCTaGGCAGATTGGATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRHLRAC*ADWMQG
Trigger: TCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATG...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTCATCTTAGGGCCTGCTaGGCAGATTGGATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGHLRAC*ADWMQG
Trigger: TCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATG...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATCATGAGGGCTACATATaGGAATGGGAGACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDHEGYI*EWETVD
Trigger: GTCCACAGTCTCCCATTCTCATATGTAGCCCTCATG...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCATGAGGGCTACATATaGGAATGGGAGACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQHEGYI*EWETVD
Trigger: GTCCACAGTCTCCCATTCTCATATGTAGCCCTCATG...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCGGTATCAGGCAGGCATaGGAGCAGCCAGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFGIRQA*EQPGQW
Trigger: CCACTGTCCTGGCTGCTCTCATGCCTGCCTGATACC...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTAAGCAGCCGGGGATTTaGCCAAGCAGGGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLKQPGI*PSRVSG
Trigger: GCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTT...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCATGTGTGGGAACAACATaGGTGGGAAGGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPCVGTT*VGRNFW
Trigger: CCAGAAATTCCTTCCCACTCATGTTGTTCCCACACA...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CCTTCTGAGTTTGCTGTTGGTGCAGGAATAAGGGAAAGGCCCAAGGTATCCAAGTCTCCTGGATCGACATaGTTTCAGTGTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSEFAVGAGIRERPKVSKSPGST*FQCGPG
Trigger: CCCAGGCCCACACTGAAAGCATGTCGATCCAGGAGA...CTTGGATACCTTGGGCCTTTCCCTTATTCCTGCACCAACAGCAAACTCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR GCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATAGCAGCTGGCAGCTaGTGCTGCTGGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTIAAGS*CCWKKA
Trigger: TGCCTTCTTCCAGCAGCAGCAGCTGCCAGCTGCTAT...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGCTTGCCCGCCAAGTTaGAGCGCCCAATCATCATCT +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTACPPS*SAQSSS
Trigger: AGATGATGATTGGGCGCTGCAACTTGGCGGGCAAGC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTGACAGCAATGACTGCTaGCCGAGGTCGGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECDSNDC*PRSVPR
Trigger: TCTCGGTACCGACCTCGGGCAGCAGTCATTGCTGTC...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACGCTGAGCAGATTGGATaGAGGGAATGTACAATTGGT +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDAEQIG*RECTIG
Trigger: ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGC...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGGCTGAGCAGATTGGATaGAGGGAATGTACAATTGGT +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVAEQIG*RECTIG
Trigger: ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGC...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTGACTGTGGACAAGATTaGCCTGTCTCCCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECDCGQD*PVSPLP
Trigger: GGGGAGAGGGGAGACAGGGCAATCTTGTCCACAGTC...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGACATGAAGGGGTAGCCTaGCCTGGCACGAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRHEGVA*PGTRCP
Trigger: TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATG...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAAGTGACAAAATCAGCTaGCCAGCCCTCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRSDKIS*PALTSP
Trigger: GGGAGAAGTGAGGGCTGGGCAGCTGATTTTGTCACT...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCCCTCTCTGTGGGTCTaGTCCACACTGTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPPSLWV*STLLGC
Trigger: ACAACCCAACAGTGTGGAGCAGACCCACAGAGAGGG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTGTCTGCCATAGCAGCTaGCAGCTGCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLVCHSS*QLLLLE
Trigger: TTCCAGCAGCAGCAGCTGCCAGCTGCTATGGCAGAC...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTGTCTGCCATAGCAGCTaGCAGCTGCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECVCHSS*QLLLLE
Trigger: TTCCAGCAGCAGCAGCTGCCAGCTGCTATGGCAGAC...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTCGACCCGGACAATATTaGGGTAGTCCACCCACACGG +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECRPGQY*GSPPTR
Trigger: CCGTGTGGGTGGACTACCCCAATATTGTCCGGGTCG...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGATGTCTCTGCCCTCGTTaGCCGGGGCTTGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRCLCPR*PGLGNH
Trigger: ATGATTACCAAGCCCCGGCCAACGAGGGCAGAGACA...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCAGGGAAGTTGCCCTTaGCAGTCTCCCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLQGSCP*QSPLTA
Trigger: TGCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTGGAGAACGTAGACTaGGGAGGAAGGGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRLENVD*GGRDGV
Trigger: TACCCCATCCCTTCCTCCCCAGTCTACGTTCTCCAG...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATTGTGTGAAATGGAGATaGGGAAGGGGCAACCTCGAA +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDCVKWR*GRGNLE
Trigger: TTCGAGGTTGCCCCTTCCCCATCTCCATTTCACACA...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAAGGACCTGTGTGAAATaGAGATGGGGAAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRRTCVK*RWGRGN
Trigger: GTTGCCCCTTCCCCATCTCCATTTCACACAGGTCCT...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACATGGCCAGTGCATAATTaGACACAGACTTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTWPVHN*TQTFRT
Trigger: GGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAATTGGTGCTGTTGGGTaGCCAGTGCATAATTGGACA +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGIGAVG*PVHNWT
Trigger: TGTCCAATTATGCACTGGCCACCCAACAGCACCAAT...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCACAGGGAATGTACAATTaGTGCTGTTGGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPQGMYN*CCWVAS
Trigger: ACTGGCCACCCAACAGCACCAATTGTACATTCCCTG...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAAGGGATGGGATGCCTaGGGTTATGGAATTAACCAG +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGKGWDA*GYGINQ
Trigger: CTGGTTAATTCCATAACCCCAGGCATCCCATCCCTT...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTCTCCCCTGACAGCATaGTGCAGTCAGCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFSPLTA*CSQPHP
Trigger: TGGATGGGGCTGACTGCATCATGCTGTCAGGGGAGA...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTTTGTGGTCAGCACAATaGTGGCAGCAGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPLWSAQ*WQQHST
Trigger: AGTGCTGTGCTGCTGCCATCATTGTGCTGACCACAA...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCATCTTAGGGCCTGCTaGGCAGATTGGATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLHLRAC*ADWMQG
Trigger: TCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACATGAGGGCTACATATaGGAATGGGAGACTGTGGAC +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRHEGYI*EWETVD
Trigger: GTCCACAGTCTCCCATTCTCATATGTAGCCCTCATG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGATGCCCAGATTATCATaGGGGCTACATATGAGAATG +
Preference number: 4 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVMPRLS*GLHMRM
Trigger: CATTCTCATATGTAGCCCTCATGATAATCTGGGCAT...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTCCCGGGCAATCGCATaGTGCATCTTCACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFSRAIA*CIFTAS
Trigger: GGAAGCGGTGAAGATGCAGCATGCGATTGCCCGGGA...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCGACAGCAATGACTGCTaGCCGAGGTCGGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFDSNDC*PRSVPR
Trigger: TCTCGGTACCGACCTCGGGCAGCAGTCATTGCTGTC...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGCGATCTACATCATCTaGCCAGATGGCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTAIYII*PDGFWR
Trigger: CCTCCAGAAGCCATCTGGGCAGATGATGTAGATCGC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGCTTTCAATGCCAAATTaGACCCGGCGATCTACATCA +
Preference number: 4 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGLSMPN*TRRSTS
Trigger: TGATGTAGATCGCCGGGTGCAATTTGGCATTGAAAG...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGCTTTCCACTTTCAATaGCAAATTGCACCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDAFHFQ*QIAPGD
Trigger: ATCGCCGGGTGCAATTTGGCATTGAAAGTGGAAAGC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTGACTGTGGACAAGATTaGCCTGTCTCCCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSDCGQD*PVSPLP
Trigger: GGGGAGAGGGGAGACAGGGCAATCTTGTCCACAGTC...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTAGCCTCTGTGGTCCTTaGCCAAACCCATCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLSLCGP*PNPSAQ
Trigger: TTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTTCAGCATGGTACTCGTaGGAGCCGTGGGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECSAWYS*EPWEKL
Trigger: CAACTTCTCCCACGGCTCCCACGAGTACCATGCTGA...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp CCTTCTGAGTTTGCTGTTGGTGCAGGAATAAGGGAAAGGCCCAAGGTATCCAAGTCTGGGCCGATTTTCTaGACCACTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: PSEFAVGAGIRERPKVSKSGPIF*TTREMS
Trigger: GCTCATCTCCCTAGTGGTCCAGAAAATCGGCCCAGA...CTTGGATACCTTGGGCCTTTCCCTTATTCCTGCACCAACAGCAAACTCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTTCTGGGCCGATTTTCTaGACCACTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPSGPIF*TTREMS
Trigger: GCTCATCTCCCTAGTGGTCCAGAAAATCGGCCCAGA...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AGTCTCCTTTCCTTCTGGGTGGGGAGTTCTGGGGTTCTTGGTGTGTGGGAGAAGCTCTTCACGCCTTCGTaGTTCTCAATTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SLLSFWVGSSGVLGVWEKLFTPS*FSILLM
Trigger: CATCAGCAAAATTGAGAACCACGAAGGCGTGAAGAG...CTTCTCCCACACACCAAGAACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGACTCTTCACGCCTTCGTaGTTCTCAATTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGLFTPS*FSILLM
Trigger: CATCAGCAAAATTGAGAACCACGAAGGCGTGAAGAG...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGACATCCAGCACAGCATTaGCGACATCGCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRHPAQH*RHRLSL
Trigger: CAGAGACAAGCGATGTCGCCAATGCTGTGCTGGATG...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTACCGAGACAGAAGCTaGGCTGAGCGGCCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFYRDRS*AERPVV
Trigger: CACAACTGGCCGCTCAGCCCAGCTTCTGTCTCGGTA...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTTACCGAGACAGAAGCTaGGCTGAGCGGCCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSYRDRS*AERPVV
Trigger: CACAACTGGCCGCTCAGCCCAGCTTCTGTCTCGGTA...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGAGGCTTTGGAGGGGTGTaGGCTGGAGAACGTAGACTG +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRGFGGV*AGERRL
Trigger: CAGTCTACGTTCTCCAGCCCACACCCCTCCAAAGCC...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGATTGGTGCTGTTGGGTaGCCAGTGCATAATTGGACA +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQIGAVG*PVHNWT
Trigger: TGTCCAATTATGCACTGGCCACCCAACAGCACCAAT...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGGGTAGCCTGCCCTaGCACGAGATGCCCAGATTA +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFRGSLP*HEMPRL
Trigger: TAATCTGGGCATCTCGTGCCAGGGCAGGCTACCCCT...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGAAGGGGTAGCCTGCCCTaGCACGAGATGCCCAGATTA +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRRGSLP*HEMPRL
Trigger: TAATCTGGGCATCTCGTGCCAGGGCAGGCTACCCCT...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGCCTCTGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCATGGGAACAACATGAGTaGGAAGGAATTTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLCGPCPNPSAQYLNLLPWEQHE*EGISGC
Trigger: GCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA...TGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGGGAACAACATGAGTaGGAAGGAATTTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQWEQHE*EGISGC
Trigger: GCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCACTCTTGGTTTGTGTGTaGGAACAACATGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPLLVCV*EQHEWE
Trigger: TTCCCACTCATGTTGTTCCCACACACAAACCAAGAG...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACGGGGTTCTTGGTGTGTaGGAGAAGTTTTATAATTGC +
Preference number: 4 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDGVLGV*EKFYNC
Trigger: GCAATTATAAAACTTCTCCCACACACCAAGAACCCC...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATCTGCTCCACACTGTTaGGTTGTCAGAGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRSAPHC*VVRGMR
Trigger: CCTCATGCCTCTGACAACCCAACAGTGTGGAGCAGA...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTGGGTCTCCCTCTCTGTaGGTCTGCTCCACACTGTTG +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSGSPSL*VCSTLL
Trigger: CAACAGTGTGGAGCAGACCCACAGAGAGGGAGACCC...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR TCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCTTTCAGGACCTGTGTaGAATGGAGATGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLLSGPV*NGDGEG
Trigger: CCCTTCCCCATCTCCATTTCACACAGGTCCTGAAAG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR TCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTGTGTGGGAACAACATaGGTGGGAAGGAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHCVGTT*VGRNFW
Trigger: CCAGAAATTCCTTCCCACTCATGTTGTTCCCACACA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGACGGGCAATCGCATGCTaGATCTTCACCGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRRAIAC*IFTAST
Trigger: TGTGGAAGCGGTGAAGATGCAGCATGCGATTGCCCG...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTGCGATCTACATCATCTaGCCAGATGGCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECAIYII*PDGFWR
Trigger: CCTCCAGAAGCCATCTGGGCAGATGATGTAGATCGC...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCACTTTCAATGCCAAATTaGACCCGGCGATCTACATCA +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPLSMPN*TRRSTS
Trigger: TGATGTAGATCGCCGGGTGCAATTTGGCATTGAAAG...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGGAATGTACAATTGGTaGTGTTGGGTGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGGMYNW*CWVASA
Trigger: TGCACTGGCCACCCAACAGCACCAATTGTACATTCC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAGGAATGTACAATTGGTaGTGTTGGGTGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRGMYNW*CWVASA
Trigger: TGCACTGGCCACCCAACAGCACCAATTGTACATTCC...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCCCCTCTCTGTGGGTCTaGTCCACACTGTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFPSLWV*STLLGC
Trigger: ACAACCCAACAGTGTGGAGCAGACCCACAGAGAGGG...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGTCTGGGCCGATTTTCTaGACCACTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWSGPIF*TTREMS
Trigger: GCTCATCTCCCTAGTGGTCCAGAAAATCGGCCCAGA...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTGGGCCGATTTTCTaGACCACTAGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLSGPIF*TTREMS
Trigger: GCTCATCTCCCTAGTGGTCCAGAAAATCGGCCCAGA...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGCTCTTCACGCCTTCGTaGTTCTCAATTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVLFTPS*FSILLM
Trigger: CATCAGCAAAATTGAGAACCACGAAGGCGTGAAGAG...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTCCAGCATCTGTGTaGCACAGACAACAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLSPASV*HRQQAC
Trigger: GCAAGCCTGTTGTCTGTGCCACACAGATGCTGGAGA...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGCATCCAGCACAGCATTaGCGACATCGCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWHPAQH*RHRLSL
Trigger: CAGAGACAAGCGATGTCGCCAATGCTGTGCTGGATG...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCATCATCTGCCCAGATaGCTTCTGGAGGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLHHLPR*LLEVHG
Trigger: ACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTCATCATCTGCCCAGATaGCTTCTGGAGGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECHHLPR*LLEVHG
Trigger: ACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATG...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTTAAAGGTGGGGCTTTaGAGGGGTGTGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFLKVGL*RGVGWR
Trigger: TCTCCAGCCCACACCCCTCCAAAGCCCCACCTTTAA...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGATTAAAGGTGGGGCTTTaGAGGGGTGTGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRLKVGL*RGVGWR
Trigger: TCTCCAGCCCACACCCCTCCAAAGCCCCACCTTTAA...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGATGTGTGAAATGGAGATaGGGAAGGGGCAACCTCGAA +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRCVKWR*GRGNLE
Trigger: TTCGAGGTTGCCCCTTCCCCATCTCCATTTCACACA...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATTGGCCAGTGCATAATTaGACACAGACTTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHWPVHN*TQTFRT
Trigger: GGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGACAGGGAATGTACAATTaGTGCTGTTGGGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRQGMYN*CCWVAS
Trigger: ACTGGCCACCCAACAGCACCAATTGTACATTCCCTG...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGCTCTTGGTTTGTGTGTaGGAACAACATGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVLLVCV*EQHEWE
Trigger: TTCCCACTCATGTTGTTCCCACACACAAACCAAGAG...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATCTCTTGGTTTGTGTGTaGGAACAACATGAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDLLVCV*EQHEWE
Trigger: TTCCCACTCATGTTGTTCCCACACACAAACCAAGAG...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAAGACACACTCATTTTTaGCTCTTGGTTTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTRHTHF*LLVCVW
Trigger: CCACACACAAACCAAGAGCCAAAAATGAGTGTGTCT...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTAGTCTCCTTTCCTTCTaGGTGGGGAGTTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLSLLSF*VGSSGV
Trigger: AACCCCAGAACTCCCCACCCAGAAGGAAAGGAGACT...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR GCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACCCATGACCGAAGCTaGAGGGATGATATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECTHDRS*RDDMFS
Trigger: GGAGAACATATCATCCCTGCAGCTTCGGTCATGGGT...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR GCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCGCGATCTACATCATCTaGCCAGATGGCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFAIYII*PDGFWR
Trigger: CCTCCAGAAGCCATCTGGGCAGATGATGTAGATCGC...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTTTCCACTTTCAATaGCAAATTGCACCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGAFHFQ*QIAPGD
Trigger: ATCGCCGGGTGCAATTTGGCATTGAAAGTGGAAAGC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACTGTTGGGTGGCCAGTaGATAATTGGACACAGACTT +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTLLGGQ*IIGHRL
Trigger: AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGGGAATGTACAATTGGTaGTGTTGGGTGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWGMYNW*CWVASA
Trigger: TGCACTGGCCACCCAACAGCACCAATTGTACATTCC...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGCTGAGCAGATTGGATaGAGGGAATGTACAATTGGT +
Preference number: 4 (lower is better)
Translates to: ALARDAQIIMRATYENGRAEQIG*RECTIG
Trigger: ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCATTTGCTAAGTCTCTTTaGGACTTAGAGACCCATGAC +
Preference number: 4 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPFAKSL*DLETHD
Trigger: GTCATGGGTCTCTAAGTCCCAAAGAGACTTAGCAAA...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCTCTCCAGCATCTGTGTaGCACAGACAACAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFSPASV*HRQQAC
Trigger: GCAAGCCTGTTGTCTGTGCCACACAGATGCTGGAGA...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTCATCATCTGCCCAGATaGCTTCTGGAGGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSHHLPR*LLEVHG
Trigger: ACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATG...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTGTGTGAAATGGAGATaGGGAAGGGGCAACCTCGAA +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLCVKWR*GRGNLE
Trigger: TTCGAGGTTGCCCCTTCCCCATCTCCATTTCACACA...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATaGAGATGGGGAAGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFRTCVK*RWGRGN
Trigger: GTTGCCCCTTCCCCATCTCCATTTCACACAGGTCCT...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGATCTGCTCCACACTGTTaGGTTGTCAGAGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRSAPHC*VVRGMR
Trigger: CCTCATGCCTCTGACAACCCAACAGTGTGGAGCAGA...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTCTTTCAATGCCAAATTaGACCCGGCGATCTACATCA +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGLSMPN*TRRSTS
Trigger: TGATGTAGATCGCCGGGTGCAATTTGGCATTGAAAG...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGAGCCCCAATCAGGATaGACTTTGCTAAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHREPQSG*TLLSLF
Trigger: AAAGAGACTTAGCAAAGTCCATCCTGATTGGGGCTC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACTCTTCACGCCTTCGTaGTTCTCAATTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTLFTPS*FSILLM
Trigger: CATCAGCAAAATTGAGAACCACGAAGGCGTGAAGAG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTGGCCAGTGCATAATTaGACACAGACTTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLWPVHN*TQTFRT
Trigger: GGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTATTGGTGCTGTTGGGTaGCCAGTGCATAATTGGACA +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECIGAVG*PVHNWT
Trigger: TGTCCAATTATGCACTGGCCACCCAACAGCACCAAT...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTTGGGAACAACATGAGTaGGAAGGAATTTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECWEQHE*EGISGC
Trigger: GCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGAGTTCTGGGGTTCTTaGTGTGTGGGAGAAGTTTTA +
Preference number: 4 (lower is better)
Translates to: QGILGPAEQIGCRECTIGEFWGS*CVGEVL
Trigger: TAAAACTTCTCCCACACACCAAGAACCCCAGAACTC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR TCA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAATGCCCAGATTATCATaGGGGCTACATATGAGAATG +
Preference number: 4 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRMPRLS*GLHMRM
Trigger: CATTCTCATATGTAGCCCTCATGATAATCTGGGCAT...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTCTTTCAATGCCAAATTaGACCCGGCGATCTACATCA +
Preference number: 4 (lower is better)
Translates to: LKTQGILGPAEQIGCRECLSMPN*TRRSTS
Trigger: TGATGTAGATCGCCGGGTGCAATTTGGCATTGAAAG...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR GCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGACTGTTGGGTGGCCAGTaGATAATTGGACACAGACTT +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRLLGGQ*IIGHRL
Trigger: AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAG...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTCTGTTGGGTGGCCAGTaGATAATTGGACACAGACTT +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSLLGGQ*IIGHRL
Trigger: AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAG...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR GCA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTGCTGAGCAGATTGGATaGAGGGAATGTACAATTGGT +
Preference number: 4 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLAEQIG*RECTIG
Trigger: ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGC...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGATGATATGTTCTCCTaGATCGACATGCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KTQGILGPAEQIGCRECTDDMFS*IDMLSV
Trigger: CACTGAAAGCATGTCGATCCAGGAGAACATATCATC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTTTTGCTAAGTCTCTTTaGGACTTAGAGACCCATGAC +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPFAKSL*DLETHD
Trigger: GTCATGGGTCTCTAAGTCCCAAAGAGACTTAGCAAA...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CCA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTTGGCCAGTGCATAATTaGACACAGACTTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSWPVHN*TQTFRT
Trigger: GGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAAGGGATGGGATGCCTaGGGTTATGGAATTAACCAG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFKGWDA*GYGINQ
Trigger: CTGGTTAATTCCATAACCCCAGGCATCCCATCCCTT...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CCA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGAAAGGGATGGGATGCCTaGGGTTATGGAATTAACCAG +
Preference number: 4 (lower is better)
Translates to: DAQIIMRATYENGRLWTRKGWDA*GYGINQ
Trigger: CTGGTTAATTCCATAACCCCAGGCATCCCATCCCTT...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
3UTR CAA 72 bp AGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATTGGACACAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SRLDAGNVQLVL*GGQCIIGHRLS
Trigger: TGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CCA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCGATGATATGTTCTCCTaGATCGACATGCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFDDMFS*IDMLSV
Trigger: CACTGAAAGCATGTCGATCCAGGAGAACATATCATC...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR GCA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGAGAAGTTTTATAATTaGTTCCAAACAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPEKFYN*FQTAGF
Trigger: AAACCCAGCTGTTTGGAAGCAATTATAAAACTTCTC...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp ACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTCACCAGCACCCGGATCTCCGGTCCCTaGGTGTCCAGGGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: TVFAFPRVRNAGSTVTSTRISGP*VSRAMA
Trigger: GGCCATCGCCCTGGACACCAAGGGACCGGAGATCCG...GGTGCTGGTGACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS CCA 90 bp AGCAAGGGGAAGACTCCTCGGCATAAGTGGACCTGGCGGGCAGCCTaGGCAGAGCGGGTGACAGCAATGACTGCTGCCCGAGGTCGGTAC +
Preference number: 5 (lower is better)
Translates to: SKGKTPRHKWTWRAA*AERVTAMTAARGRY
Trigger: GTACCGACCTCGGGCAGCAGTCATTGCTGTCACCCGCTCTGCCCAGGCTGCCCGCCAGGTCCACTTATGCCGAGGAGTCTTCCCCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GATGGCCACGGGCCGGTAGCTGAGTGGGGAACCTGCAAAGCTCTCCACCGCCTCGCCTTGATCATCTCCTaGAGGCGCTCCACGGAGCGA +
Preference number: 5 (lower is better)
Translates to: DGHGPVAEWGTCKALHRLALIIS*RRSTER
Trigger: TCGCTCCGTGGAGCGCCTCAAGGAGATGATCAAGGC...GAGGCGGTGGAGAGCTTTGCAGGTTCCCCACTCAGCTACCGGCCCGTGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CAA 90 bp GTCCACCCACACGGTGTTCGCGTTCCCCCGCGTCCGGAACGCGGGGTCCACAGTATGTTCATCCCGGCCTaGATCATCTCCTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: VHPHGVRVPPRPERGVHSMFIPA*IISLRR
Trigger: GCGCCTCAAGGAGATGATCAAGGCCGGGATGAACAT...ACTGTGGACCCCGCGTTCCGGACGCGGGGGAACGCGAACACCGTGTGGGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS GCA 90 bp TCGCTGGCTTTCCGCACAAAGGAGGCAAAGACGATGTCCACCCCATaGTCCACCCCGAAGCGCAGGTCTCGGACGTCCTGCTCGGACAGC +
Preference number: 5 (lower is better)
Translates to: SLAFRTKEAKTMSTP*STPKRRSRTSCSDS
Trigger: GCTGTCCGAGCAGGACGTCCGAGACCTGCGCTTCGGGGTGGAGCATGGGGTGGACATCGTCTTTGCCTCCTTTGTGCGGAAAGCCAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS CCA 90 bp AAGTTCACGCCCTTCCGGCTGCCCAGGACGCCGCCGTTCTCCACTTaGGTCACCAGTCCCTCTGGGCCGATTTTCTGGACCACTAGGGAG +
Preference number: 5 (lower is better)
Translates to: KFTPFRLPRTPPFST*VTSPSGPIFWTTRE
Trigger: CTCCCTAGTGGTCCAGAAAATCGGCCCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGGCGTCCTGGGCAGCCGGAAGGGCGTGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GATCATCTCCTTGAGGCGCTCCACGGAGCGAGATGCTGGCCCGATGGTGGCAATACCGCCTCCCGGACGTaGGCGATGGACTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: DHLLEALHGARCWPDGGNTASRT*AMDSAW
Trigger: CCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGT...ATTGCCACCATCGGGCCAGCATCTCGCTCCGTGGAGCGCCTCAAGGAGATGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS-3UTR CAA 90 bp CGCCTCCCGGACGTTGGCGATGGACTCAGCATGGTACTCGTGGGAGCCGTGGGAGAGCCGTGGGAGAAGTaGAGTCGCGCAATGTTCATC +
Preference number: 5 (lower is better)
Translates to: RLPDVGDGLSMVLVGAVGEPWEK*SRAMFI
Trigger: GATGAACATTGCGCGACTCAACTTCTCCCACGGCTC...TCCCACGGCTCCCACGAGTACCATGCTGAGTCCATCGCCAACGTCCGGGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573938.1
CDS GCA 90 bp TTCCATGCCACTGCACACCTCTCTGGGTCTCCCTCTCTGTGGGTCTaGTCCACACTGTTGGGTTGTCAGAGGCATGAGGCCCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FHATAHLSGSPSLWV*STLLGCQRHEAQLG
Trigger: GCCCAGCTGGGCCTCATGCCTCTGACAACCCAACAGTGTGGAGCAGACCCACAGAGAGGGAGACCCAGAGAGGTGTGCAGTGGCATGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS CCA 90 bp TGGCCCTTCCATGCCACTGCACACCTCTCTGGGTCTCCCTCTCTGTaGGTCTGCTCCACACTGTTGGGTTGTCAGAGGCATGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: WPFHATAHLSGSPSL*VCSTLLGCQRHEAQ
Trigger: CTGGGCCTCATGCCTCTGACAACCCAACAGTGTGGAGCAGACCCACAGAGAGGGAGACCCAGAGAGGTGTGCAGTGGCATGGAAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACCGCCTCCCGGACGTaGGCGATGGACTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVTASRT*AMDSAW
Trigger: CCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGT...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp ATGAGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACACGGATCTCCGGTCCCTaGGTGTCCAGGGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: MRAARTVVYKPSTEVVKTRISGP*VSRAMA
Trigger: GGCCATCGCCCTGGACACCAAGGGACCGGAGATCCG...TGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS TCA 90 bp CCGCTTCCACAGGGAAGTTGCCCTTGGCAGTCTCCCCTGACAGCATaGTGCAGTCAGCCCCATCCAGCACAGCATTGGCGACATCGCTTG +
Preference number: 5 (lower is better)
Translates to: PLPQGSCPWQSPLTA*CSQPHPAQHWRHRL
Trigger: CAAGCGATGTCGCCAATGCTGTGCTGGATGGGGCTGACTGCATCATGCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCAACCGCCTCCCGGACGTaGGCGATGGACTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPTASRT*AMDSAW
Trigger: CCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGT...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATCGGATCTCCGGTCCCTaGGTGTCCAGGGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDRISGP*VSRAMA
Trigger: GGCCATCGCCCTGGACACCAAGGGACCGGAGATCCG...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCAGCCGCCGTTCTCCACTaGGGTCACCAGTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPAAVLH*GHQSLW
Trigger: CCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGGC...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACAGCTCCTGGGTCAGTaGGGCCACACTGGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: KTQGILGPAEQIGCRECTQLLGQ*GHTGPP
Trigger: CGGCGGGCCAGTGTGGCCCAACTGACCCAGGAGCTG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGACAGCTCCTGGGTCAGTaGGGCCACACTGGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRQLLGQ*GHTGPP
Trigger: CGGCGGGCCAGTGTGGCCCAACTGACCCAGGAGCTG...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCAGCTCCTGGGTCAGTaGGGCCACACTGGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPQLLGQ*GHTGPP
Trigger: CGGCGGGCCAGTGTGGCCCAACTGACCCAGGAGCTG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGCACAGACAACAGGCTaGCCCGCCAAGTTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGAQTTG*PAKLQR
Trigger: GCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTGC...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGGCACAGACAACAGGCTaGCCCGCCAAGTTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGAQTTG*PAKLQR
Trigger: GCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTGC...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp CCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGGCAGGAGGAGCGCTTCCACAGGGAAGTaGCCCTTGGCAGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PNPSAQYLNLLPGRGRRSASTGK*PLAVSP
Trigger: AGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAGC...GCTCCTCCTGCCCCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATACCGCCTCCCGGACGTaGGCGATGGACTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHTASRT*AMDSAW
Trigger: CCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGT...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACACGGATCTCCGGTCCCTaGGTGTCCAGGGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: KTQGILGPAEQIGCRECTRISGP*VSRAMA
Trigger: GGCCATCGCCCTGGACACCAAGGGACCGGAGATCCG...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGCCGCCGTTCTCCACTaGGGTCACCAGTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ALARDAQIIMRATYENGRAAVLH*GHQSLW
Trigger: CCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGGC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATGCCGCCGTTCTCCACTaGGGTCACCAGTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHAAVLH*GHQSLW
Trigger: CCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGGC...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCACAGACAACAGGCTaGCCCGCCAAGTTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPAQTTG*PAKLQR
Trigger: GCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTGC...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CATGTAACTGTTAGTCACCATGAAGGGGTAGCCTGCCCTGGCACGAGATGCCCACTCGTTGGCCGGGGCTaGGTAATCATGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HVTVSHHEGVACPGTRCPLVGRG*VIMLSS
Trigger: GCTGGAGAGCATGATTACCAAGCCCCGGCCAACGAG...TGGGCATCTCGTGCCAGGGCAGGCTACCCCTTCATGGTGACTAACAGTTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGGCAGCAGCACAGCACTaGAAGGCAGCCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGAAAQH*KAASTA
Trigger: TGCTGTGGAGGCTGCCTTCAAGTGCTGTGCTGCTGC...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp CCCACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGGAAGCAGCCGGGGATTaGACCAAGCAGGGTATCAGG +
Preference number: 5 (lower is better)
Translates to: PTPRDGMPGVMELTSQTGEAAGD*TKQGIR
Trigger: CCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTTC...CCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS CCA 90 bp GACTTAGAGACCCATGACCGAAGCTGCAGGGATGATATGTTCTCCTaGATCGACATGCTTTCAGTGTGGGCCTGGGGCTGCGGGACCATG +
Preference number: 5 (lower is better)
Translates to: DLETHDRSCRDDMFS*IDMLSVWAWGCGTM
Trigger: CATGGTCCCGCAGCCCCAGGCCCACACTGAAAGCATGTCGATCCAGGAGAACATATCATCCCTGCAGCTTCGGTCATGGGTCTCTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CAA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGCCTTGATCATCTCCTaGAGGCGCTCCACGGAGCGA +
Preference number: 5 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPALIIS*RRSTER
Trigger: TCGCTCCGTGGAGCGCCTCAAGGAGATGATCAAGGC...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGCTTGCCCGCCAAGTaGCAGCGCCCAATCATCATC +
Preference number: 5 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPGLPAK*QRPIII
Trigger: GATGATGATTGGGCGCTGCAACTTGGCGGGCAAGCC...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGGCTTGCCCGCCAAGTaGCAGCGCCCAATCATCATC +
Preference number: 5 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDGLPAK*QRPIII
Trigger: GATGATGATTGGGCGCTGCAACTTGGCGGGCAAGCC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGCTCGTTGGCCGGGGCTaGGTAATCATGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVLVGRG*VIMLSS
Trigger: GCTGGAGAGCATGATTACCAAGCCCCGGCCAACGAG...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCACATTGGCGACATCGCTaGTCTCTGCCCTCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPHWRHR*SLPSLA
Trigger: GGCCAACGAGGGCAGAGACAAGCGATGTCGCCAATG...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGACAGGGAAGTTGCCCTaGGCAGTCTCCCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQTGKLP*AVSPDS
Trigger: GCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTGT...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGGCAGCAGCACAGCACTaGAAGGCAGCCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVAAAQH*KAASTA
Trigger: TGCTGTGGAGGCTGCCTTCAAGTGCTGTGCTGCTGC...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp AGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGACGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SSQDSGLQAQHGGCEDSDAGNVQ*VLLGGQ
Trigger: CTGGCCACCCAACAGCACCAATTGTACATTCCCTGC...GTCACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp TGGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGACTGTGGACAAGATaGCCCTGTCTCCCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: WEQHEWEGISGCRRKQPGRLWTR*PCLPSP
Trigger: GGGAGAGGGGAGACAGGGCAATCTTGTCCACAGTCT...CCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATGCCTTGATCATCTCCTaGAGGCGCTCCACGGAGCGA +
Preference number: 5 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHALIIS*RRSTER
Trigger: TCGCTCCGTGGAGCGCCTCAAGGAGATGATCAAGGC...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAATGTTCATCCCGGCCTaGATCATCTCCTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGMFIPA*IISLRR
Trigger: GCGCCTCAAGGAGATGATCAAGGCCGGGATGAACAT...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTCGGATCTCCGGTCCCTaGGTGTCCAGGGCGATGGCC +
Preference number: 5 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSRISGP*VSRAMA
Trigger: GGCCATCGCCCTGGACACCAAGGGACCGGAGATCCG...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGGCCGCCGTTCTCCACTaGGGTCACCAGTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWAAVLH*GHQSLW
Trigger: CCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGGC...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATCTCGTTGGCCGGGGCTaGGTAATCATGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHLVGRG*VIMLSS
Trigger: GCTGGAGAGCATGATTACCAAGCCCCGGCCAACGAG...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAACAGGGAAGTTGCCCTaGGCAGTCTCCCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: ALARDAQIIMRATYENGRTGKLP*AVSPDS
Trigger: GCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTGT...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATGCAGCAGCACAGCACTaGAAGGCAGCCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHAAAQH*KAASTA
Trigger: TGCTGTGGAGGCTGCCTTCAAGTGCTGTGCTGCTGC...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGAGACTGTGGACAAGATaGCCCTGTCTCCCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQRLWTR*PCLPSP
Trigger: GGGAGAGGGGAGACAGGGCAATCTTGTCCACAGTCT...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATAGACTGTGGACAAGATaGCCCTGTCTCCCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDRLWTR*PCLPSP
Trigger: GGGAGAGGGGAGACAGGGCAATCTTGTCCACAGTCT...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGCCATCAGCGCAATACTaGAACCTTCTCCCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVPSAQY*NLLPGR
Trigger: CCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGG...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp GGGAACAACATGAGTGGGAAGGAATTTCTGGGTGCAGAAGGAAGCAGCCGGGGAGTCTGCTCCACACTGTaGGGTTGTCAGAGGCATGAG +
Preference number: 5 (lower is better)
Translates to: GNNMSGKEFLGAEGSSRGVCSTL*GCQRHE
Trigger: CTCATGCCTCTGACAACCCAACAGTGTGGAGCAGAC...TCCCCGGCTGCTTCCTTCTGCACCCAGAAATTCCTTCCCACTCATGTTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGATGTTCATCCCGGCCTaGATCATCTCCTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQMFIPA*IISLRR
Trigger: GCGCCTCAAGGAGATGATCAAGGCCGGGATGAACAT...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGAGCCGTGGGAGAAGTaGAGTCGCGCAATGTTCATC +
Preference number: 5 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQEPWEK*SRAMFI
Trigger: GATGAACATTGCGCGACTCAACTTCTCCCACGGCTC...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTACCGCCTCCCGGACGTaGGCGATGGACTCAGCATGG +
Preference number: 5 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSTASRT*AMDSAW
Trigger: CCATGCTGAGTCCATCGCCAACGTCCGGGAGGCGGT...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGAGGCTTGCCCGCCAAGTaGCAGCGCCCAATCATCATC +
Preference number: 5 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRGLPAK*QRPIII
Trigger: GATGATGATTGGGCGCTGCAACTTGGCGGGCAAGCC...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTGCACAGACAACAGGCTaGCCCGCCAAGTTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLAQTTG*PAKLQR
Trigger: GCGCTGCAACTTGGCGGGCAAGCCTGTTGTCTGTGC...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTCTCGTTGGCCGGGGCTaGGTAATCATGCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QGILGPAEQIGCRECTIGLVGRG*VIMLSS
Trigger: GCTGGAGAGCATGATTACCAAGCCCCGGCCAACGAG...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGACATTGGCGACATCGCTaGTCTCTGCCCTCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GWPVHNWTQTFRTCVKWRHWRHR*SLPSLA
Trigger: GGCCAACGAGGGCAGAGACAAGCGATGTCGCCAATG...TCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGCCATCCAGCACAGCATaGGCGACATCGCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVPSSTA*ATSLVS
Trigger: AGAGACAAGCGATGTCGCCAATGCTGTGCTGGATGG...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTACAGGGAAGTTGCCCTaGGCAGTCTCCCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: QGILGPAEQIGCRECTIGTGKLP*AVSPDS
Trigger: GCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTGT...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTACAGGGAAGTTGCCCTaGGCAGTCTCCCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPTGKLP*AVSPDS
Trigger: GCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTGT...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTTCCACAGGGAAGTaGCCCTTGGCAGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: QGILGPAEQIGCRECTIGASTGK*PLAVSP
Trigger: AGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAGC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQAGNVQ*VLLGGQ
Trigger: CTGGCCACCCAACAGCACCAATTGTACATTCCCTGC...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CCTTCTGAGTTTGCTGTTGGTGCAGGAATAAGGGAAAGGCCCAAGGTATCCAAGCAGCCTCTGTGGTCCTaGCCCAAACCCATCAGCGCA +
Preference number: 5 (lower is better)
Translates to: PSEFAVGAGIRERPKVSKQPLWS*PKPISA
Trigger: TGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCTG...CTTGGATACCTTGGGCCTTTCCCTTATTCCTGCACCAACAGCAAACTCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp CACCCCAAGGGATGGGATGCCTGGGGTTATGGAATTAACCAGCCAAACTGGGATGTCTGCTCCACACTGTaGGGTTGTCAGAGGCATGAG +
Preference number: 5 (lower is better)
Translates to: HPKGWDAWGYGINQPNWDVCSTL*GCQRHE
Trigger: CTCATGCCTCTGACAACCCAACAGTGTGGAGCAGAC...ATCCCAGTTTGGCTGGTTAATTCCATAACCCCAGGCATCCCATCCCTTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392414.7
ENST00000571194.5
CDS CCA 90 bp TTTCAATGCCAAATTGCACCCGGCGATCTACATCATCTGCCCAGATaGCTTCTGGAGGTTCACGGTAAAGCAAGGGGAAGACTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: FQCQIAPGDLHHLPR*LLEVHGKARGRLLG
Trigger: GCCGAGGAGTCTTCCCCTTGCTTTACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATGTAGATCGCCGGGTGCAATTTGGCATTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATATGTTCATCCCGGCCTaGATCATCTCCTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: EQIGCRECTIGAVGWPVHMFIPA*IISLRR
Trigger: GCGCCTCAAGGAGATGATCAAGGCCGGGATGAACAT...ATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGAGAGCCGTGGGAGAAGTaGAGTCGCGCAATGTTCATC +
Preference number: 5 (lower is better)
Translates to: ALARDAQIIMRATYENGREPWEK*SRAMFI
Trigger: GATGAACATTGCGCGACTCAACTTCTCCCACGGCTC...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTCATTGGCGACATCGCTaGTCTCTGCCCTCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLHWRHR*SLPSLA
Trigger: GGCCAACGAGGGCAGAGACAAGCGATGTCGCCAATG...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACCATCCAGCACAGCATaGGCGACATCGCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: ALARDAQIIMRATYENGRPSSTA*ATSLVS
Trigger: AGAGACAAGCGATGTCGCCAATGCTGTGCTGGATGG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTGCTTCCACAGGGAAGTaGCCCTTGGCAGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLASTGK*PLAVSP
Trigger: AGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAGC...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CCAAACCCATCAGCGCAATACTTGAACCTTCTCCCAGGTAGGGGCAGGAGGAGCGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATT +
Preference number: 5 (lower is better)
Translates to: PNPSAQYLNLLPGRGRRSVQLVL*GGQCII
Trigger: AATTATGCACTGGCCACCCAACAGCACCAATTGTAC...GCTCCTCCTGCCCCTACCTGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp AGAGCAGCCAGGACAGTGGTCTACAAGCCCAGCACGGAGGTTGTGAAGACAGTGGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATT +
Preference number: 5 (lower is better)
Translates to: RAARTVVYKPSTEVVKTVVQLVL*GGQCII
Trigger: AATTATGCACTGGCCACCCAACAGCACCAATTGTAC...CACTGTCTTCACAACCTCCGTGCTGGGCTTGTAGACCACTGTCCTGGCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGAAGCAGCCGGGGATTaGACCAAGCAGGGTATCAGG +
Preference number: 5 (lower is better)
Translates to: KTQGILGPAEQIGCRECTEAAGD*TKQGIR
Trigger: CCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTTC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGAGAGCCGTGGGAGAAGTaGAGTCGCGCAATGTTCATC +
Preference number: 5 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHREPWEK*SRAMFI
Trigger: GATGAACATTGCGCGACTCAACTTCTCCCACGGCTC...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGAGCCGTGGGAGAAGTaGAGTCGCGCAATGTTCATC +
Preference number: 5 (lower is better)
Translates to: KTQGILGPAEQIGCRECTEPWEK*SRAMFI
Trigger: GATGAACATTGCGCGACTCAACTTCTCCCACGGCTC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCGGCTTGCCCGCCAAGTaGCAGCGCCCAATCATCATC +
Preference number: 5 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFGLPAK*QRPIII
Trigger: GATGATGATTGGGCGCTGCAACTTGGCGGGCAAGCC...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGACATTGGCGACATCGCTaGTCTCTGCCCTCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: DAQIIMRATYENGRLWTRHWRHR*SLPSLA
Trigger: GGCCAACGAGGGCAGAGACAAGCGATGTCGCCAATG...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACCATCCAGCACAGCATaGGCGACATCGCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: AGNVQLVLLGGQCIIGHRPSSTA*ATSLVS
Trigger: AGAGACAAGCGATGTCGCCAATGCTGTGCTGGATGG...TCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTCCATCCAGCACAGCATaGGCGACATCGCTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: QLVLLGGQCIIGHRLSGPPSSTA*ATSLVS
Trigger: AGAGACAAGCGATGTCGCCAATGCTGTGCTGGATGG...AGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTGCTTCCACAGGGAAGTaGCCCTTGGCAGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSASTGK*PLAVSP
Trigger: AGGGGAGACTGCCAAGGGCAACTTCCCTGTGGAAGC...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp GAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCGCAGCAGCACAGCACTaGAAGGCAGCCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ECTIGAVGWPVHNWTQTFAAAQH*KAASTA
Trigger: TGCTGTGGAGGCTGCCTTCAAGTGCTGTGCTGCTGC...GAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: KTQGILGPAEQIGCRECTAGNVQ*VLLGGQ
Trigger: CTGGCCACCCAACAGCACCAATTGTACATTCCCTGC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 90 bp CTTTCCACTTTCAATGCCAAATTGCACCCGGCGATCTACATCATCTaGCCAGATGGCTTCTGGAGGTTCACGGTAAAGCAAGGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LSTFNAKLHPAIYII*PDGFWRFTVKQGED
Trigger: GTCTTCCCCTTGCTTTACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATGTAGATCGCCGGGTGCAATTTGGCATTGAAAGTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTATGTTCATCCCGGCCTaGATCATCTCCTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLMFIPA*IISLRR
Trigger: GCGCCTCAAGGAGATGATCAAGGCCGGGATGAACAT...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAATTTTGCTGATGATCTaGATGCCGTGTCCTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPILLMI*MPCPSG
Trigger: TCCGGAAGGACACGGCATCAAGATCATCAGCAAAAT...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGATTTTGCTGATGATCTaGATGCCGTGTCCTTCCGGA +
Preference number: 5 (lower is better)
Translates to: GAVGWPVHNWTQTFRTCVILLMI*MPCPSG
Trigger: TCCGGAAGGACACGGCATCAAGATCATCAGCAAAAT...CACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGACTTTCAATGCCAAATaGCACCCGGCGATCTACATC +
Preference number: 5 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQTFNAK*HPAIYI
Trigger: GATGTAGATCGCCGGGTGCAATTTGGCATTGAAAGT...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAACTTTCAATGCCAAATaGCACCCGGCGATCTACATC +
Preference number: 5 (lower is better)
Translates to: PAEQIGCRECTIGAVGWPTFNAK*HPAIYI
Trigger: GATGTAGATCGCCGGGTGCAATTTGGCATTGAAAGT...TGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGGCAGGGAATGTACAATaGGTGCTGTTGGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWAGNVQ*VLLGGQ
Trigger: CTGGCCACCCAACAGCACCAATTGTACATTCCCTGC...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAGGCCTGCTGAGCAGATaGGATGCAGGGAATGTACAA +
Preference number: 5 (lower is better)
Translates to: KTQGILGPAEQIGCRECTGLLSR*DAGNVQ
Trigger: TTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCC...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACTGTGGACAAGAGAAGCAGCCGGGGATTaGACCAAGCAGGGTATCAGG +
Preference number: 5 (lower is better)
Translates to: DAQIIMRATYENGRLWTREAAGD*TKQGIR
Trigger: CCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTTC...TCTTGTCCACAGTCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp AGCCTCTGTGGTCCTTGCCCAAACCCATCAGCGCAATACTTGAACCTTCTCCCATCGTGGTTCTCAATTTaGCTGATGATCTTGATGCCG +
Preference number: 5 (lower is better)
Translates to: SLCGPCPNPSAQYLNLLPSWFSI*LMILMP
Trigger: CGGCATCAAGATCATCAGCAAAATTGAGAACCACGA...TGGGAGAAGGTTCAAGTATTGCGCTGATGGGTTTGGGCAAGGACCACAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp CTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTCGTGGTTCTCAATTTaGCTGATGATCTTGATGCCG +
Preference number: 5 (lower is better)
Translates to: LLSRLDAGNVQLVLLGGQSWFSI*LMILMP
Trigger: CGGCATCAAGATCATCAGCAAAATTGAGAACCACGA...CTGGCCACCCAACAGCACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTGGCCTGCTGAGCAGATaGGATGCAGGGAATGTACAA +
Preference number: 5 (lower is better)
Translates to: LKTQGILGPAEQIGCRECGLLSR*DAGNVQ
Trigger: TTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCC...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 90 bp GACTTTGCTAAGTCTCTTTGGGACTTAGAGACCCATGACCGAAGCTaGAGGGATGATATGTTCTCCTGGATCGACATGCTTTCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: DFAKSLWDLETHDRS*RDDMFSWIDMLSVW
Trigger: CCACACTGAAAGCATGTCGATCCAGGAGAACATATCATCCCTGCAGCTTCGGTCATGGGTCTCTAAGTCCCAAAGAGACTTAGCAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CAA 90 bp GCCCTGGCACGAGATGCCCAGATTATCATGAGGGCTACATATGAGAATGGGAGACAATCAGGATGGACTTaGCTAAGTCTCTTTGGGACT +
Preference number: 5 (lower is better)
Translates to: ALARDAQIIMRATYENGRQSGWT*LSLFGT
Trigger: AGTCCCAAAGAGACTTAGCAAAGTCCATCCTGATTG...TCTCCCATTCTCATATGTAGCCCTCATGATAATCTGGGCATCTCGTGCCAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp AAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAACTTTCAATGCCAAATaGCACCCGGCGATCTACATC +
Preference number: 5 (lower is better)
Translates to: KTQGILGPAEQIGCRECTTFNAK*HPAIYI
Trigger: GATGTAGATCGCCGGGTGCAATTTGGCATTGAAAGT...TGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp CAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTACAATTGGTGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATT +
Preference number: 5 (lower is better)
Translates to: QGILGPAEQIGCRECTIGVQLVL*GGQCII
Trigger: AATTATGCACTGGCCACCCAACAGCACCAATTGTAC...ACCAATTGTACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GGGAATGTACAATTGGTGCTGTTGGGTGGCCAGTGCATAATTGGACACAGACTTGGAGTTCTGGGGTTCTaGGTGTGTGGGAGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: GNVQLVLLGGQCIIGHRLGVLGF*VCGRSF
Trigger: AAAACTTCTCCCACACACCAAGAACCCCAGAACTCC...AAGTCTGTGTCCAATTATGCACTGGCCACCCAACAGCACCAATTGTACATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342741.6
CDS-3UTR CAA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGATTTTGCTGATGATCTaGATGCCGTGTCCTTCCGGA +
Preference number: 5 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWILLMI*MPCPSG
Trigger: TCCGGAAGGACACGGCATCAAGATCATCAGCAAAAT...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTGTACAATTGGTGCTGTaGGGTGGCCAGTGCATAATT +
Preference number: 5 (lower is better)
Translates to: LKTQGILGPAEQIGCRECVQLVL*GGQCII
Trigger: AATTATGCACTGGCCACCCAACAGCACCAATTGTAC...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTCAATCAGGATGGACTTaGCTAAGTCTCTTTGGGACT +
Preference number: 5 (lower is better)
Translates to: LKTQGILGPAEQIGCRECQSGWT*LSLFGT
Trigger: AGTCCCAAAGAGACTTAGCAAAGTCCATCCTGATTG...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS-3UTR CAA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTATTTTGCTGATGATCTaGATGCCGTGTCCTTCCGGA +
Preference number: 5 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSILLMI*MPCPSG
Trigger: TCCGGAAGGACACGGCATCAAGATCATCAGCAAAAT...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS-3UTR CAA 90 bp TGGCCAGTGCATAATTGGACACAGACTTTCAGGACCTGTGTGAAATGGAGATGGTCGTGGTTCTCAATTTaGCTGATGATCTTGATGCCG +
Preference number: 5 (lower is better)
Translates to: WPVHNWTQTFRTCVKWRWSWFSI*LMILMP
Trigger: CGGCATCAAGATCATCAGCAAAATTGAGAACCACGA...CCATCTCCATTTCACACAGGTCCTGAAAGTCTGTGTCCAATTATGCACTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp TTAAAGACTCAAGGCATCTTAGGGCCTGCTGAGCAGATTGGATGCAGGGAATGTTCGTGGTTCTCAATTTaGCTGATGATCTTGATGCCG +
Preference number: 5 (lower is better)
Translates to: LKTQGILGPAEQIGCRECSWFSI*LMILMP
Trigger: CGGCATCAAGATCATCAGCAAAATTGAGAACCACGA...ACATTCCCTGCATCCAATCTGCTCAGCAGGCCCTAAGATGCCTTGAGTCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS-3UTR CAA 90 bp GCATCCATCCCACCCAGTTTTCCCAAAAGCGTGGACTTTCATGTAACTGTTAGTACTTTCAATGCCAAATaGCACCCGGCGATCTACATC +
Preference number: 5 (lower is better)
Translates to: ASIPPSFPKSVDFHVTVSTFNAK*HPAIYI
Trigger: GATGTAGATCGCCGGGTGCAATTTGGCATTGAAAGT...ACTAACAGTTACATGAAAGTCCACGCTTTTGGGAAAACTGGGTGGGATGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
CDS GCA 72 bp CCATGCTCCACCCCGAAGCGCAGGTCTCGGACGTCCTaGTCGGACAGCCCGGGCAAGTCCACCTGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: PCSTPKRRSRTS*SDSPGKSTWAP
Trigger: AGGGGCCCAGGTGGACTTGCCCGGGCTGTCCGAGCAGGACGTCCGAGACCTGCGCTTCGGGGTGGAGCATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp CCACCTGGGCCCCTGGCAAGTTCACGCCCTTCCGGCTaGCCAGGACGCCGCCGTTCTCCACTTGGGTCACCA +
Preference number: 6 (lower is better)
Translates to: PPGPLASSRPSG*PGRRRSPLGSP
Trigger: TGGTGACCCAAGTGGAGAACGGCGGCGTCCTGGGCAGCCGGAAGGGCGTGAACTTGCCAGGGGCCCAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp GCGGGCAGCCTGGGCAGAGCGGGTGACAGCAATGACTaGTGCCCGAGGTCGGTACCGAGACAGAAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: AGSLGRAGDSND*CPRSVPRQKLG
Trigger: GCCCAGCTTCTGTCTCGGTACCGACCTCGGGCAGCAGTCATTGCTGTCACCCGCTCTGCCCAGGCTGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS CCA 72 bp CCCTTCCGGCTGCCCAGGACGCCGCCGTTCTCCACTTaGGTCACCAGTCCCTCTGGGCCGATTTTCTGGACC +
Preference number: 6 (lower is better)
Translates to: PFRLPRTPPFST*VTSPSGPIFWT
Trigger: GGTCCAGAAAATCGGCCCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGGCGTCCTGGGCAGCCGGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS CAA 72 bp GCCCTTCCGGCTGCCCAGGACGCCGCCGTTCTCCACTaGGGTCACCAGTCCCTCTGGGCCGATTTTCTGGAC +
Preference number: 6 (lower is better)
Translates to: ALPAAQDAAVLH*GHQSLWADFLD
Trigger: GTCCAGAAAATCGGCCCAGAGGGACTGGTGACCCAAGTGGAGAACGGCGGCGTCCTGGGCAGCCGGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp CTCCTCAAACAGCTGCCGGTGGTACACTGCGGCCTCTaGCTCCCGGGCAATCGCATGCTGCATCTTCACCGC +
Preference number: 6 (lower is better)
Translates to: LLKQLPVVHCGL*LPGNRMLHLHR
Trigger: GCGGTGAAGATGCAGCATGCGATTGCCCGGGAGGCAGAGGCCGCAGTGTACCACCGGCAGCTGTTTGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS CCA 72 bp AAGACTCCTCGGCATAAGTGGACCTGGCGGGCAGCCTaGGCAGAGCGGGTGACAGCAATGACTGCTGCCCGA +
Preference number: 6 (lower is better)
Translates to: KTPRHKWTWRAA*AERVTAMTAAR
Trigger: TCGGGCAGCAGTCATTGCTGTCACCCGCTCTGCCCAGGCTGCCCGCCAGGTCCACTTATGCCGAGGAGTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp TTCCGCACAAAGGAGGCAAAGACGATGTCCACCCCATaGTCCACCCCGAAGCGCAGGTCTCGGACGTCCTGC +
Preference number: 6 (lower is better)
Translates to: FRTKEAKTMSTP*STPKRRSRTSC
Trigger: GCAGGACGTCCGAGACCTGCGCTTCGGGGTGGAGCATGGGGTGGACATCGTCTTTGCCTCCTTTGTGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS CAA 90 bp GAGCGGCCAGTTGTGGTCAGCACAATGATGGCAGCAGCACAGCACTaGAAGGCAGCCTCCACAGCACCAATGGCGGTGACCTCAGTGGGA +
Preference number: 6 (lower is better)
Translates to: ERPVVVSTMMAAAQH*KAASTAPMAVTSVG
Trigger: TCCCACTGAGGTCACCGCCATTGGTGCTGTGGAGGCTGCCTTCAAGTGCTGTGCTGCTGCCATCATTGTGCTGACCACAACTGGCCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS TCA 72 bp CAGGGAAGTTGCCCTTGGCAGTCTCCCCTGACAGCATaGTGCAGTCAGCCCCATCCAGCACAGCATTGGCGA +
Preference number: 6 (lower is better)
Translates to: QGSCPWQSPLTA*CSQPHPAQHWR
Trigger: TCGCCAATGCTGTGCTGGATGGGGCTGACTGCATCATGCTGTCAGGGGAGACTGCCAAGGGCAACTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp GAAGCTGCAGGGATGATATGTTCTCCTGGATCGACATaGTTTCAGTGTGGGCCTGGGGCTGCGGGACCATGG +
Preference number: 6 (lower is better)
Translates to: EAAGMICSPGST*FQCGPGAAGPW
Trigger: CCATGGTCCCGCAGCCCCAGGCCCACACTGAAAGCATGTCGATCCAGGAGAACATATCATCCCTGCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS CCA 72 bp ACCCATGACCGAAGCTGCAGGGATGATATGTTCTCCTaGATCGACATGCTTTCAGTGTGGGCCTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: THDRSCRDDMFS*IDMLSVWAWGC
Trigger: GCAGCCCCAGGCCCACACTGAAAGCATGTCGATCCAGGAGAACATATCATCCCTGCAGCTTCGGTCATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1
CDS CAA 72 bp GAGGAAGCCACGGAGCTTTCCACTTTCAATGCCAAATaGCACCCGGCGATCTACATCATCTGCCCAGATGGC +
Preference number: 6 (lower is better)
Translates to: EEATELSTFNAK*HPAIYIICPDG
Trigger: GCCATCTGGGCAGATGATGTAGATCGCCGGGTGCAATTTGGCATTGAAAGTGGAAAGCTCCGTGGCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp AGGAAGCCACGGAGCTTTCCACTTTCAATGCCAAATTaGACCCGGCGATCTACATCATCTGCCCAGATGGCT +
Preference number: 6 (lower is better)
Translates to: RKPRSFPLSMPN*TRRSTSSAQMA
Trigger: AGCCATCTGGGCAGATGATGTAGATCGCCGGGTGCAATTTGGCATTGAAAGTGGAAAGCTCCGTGGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS CCA 72 bp CAAATTGCACCCGGCGATCTACATCATCTGCCCAGATaGCTTCTGGAGGTTCACGGTAAAGCAAGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: QIAPGDLHHLPR*LLEVHGKARGR
Trigger: TCTTCCCCTTGCTTTACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATGTAGATCGCCGGGTGCAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp TTCAATGCCAAATTGCACCCGGCGATCTACATCATCTaGCCAGATGGCTTCTGGAGGTTCACGGTAAAGCAA +
Preference number: 6 (lower is better)
Translates to: FNAKLHPAIYII*PDGFWRFTVKQ
Trigger: TTGCTTTACCGTGAACCTCCAGAAGCCATCTGGGCAGATGATGTAGATCGCCGGGTGCAATTTGGCATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342741.6
ENST00000392414.7
ENST00000571194.5
ENST00000572740.1
CDS GCA 72 bp AAGTCTCTTTGGGACTTAGAGACCCATGACCGAAGCTaGAGGGATGATATGTTCTCCTGGATCGACATGCTT +
Preference number: 6 (lower is better)
Translates to: KSLWDLETHDRS*RDDMFSWIDML
Trigger: AAGCATGTCGATCCAGGAGAACATATCATCCCTGCAGCTTCGGTCATGGGTCTCTAAGTCCCAAAGAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342741.6
ENST00000572740.1