RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKD2L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107593

Ensembl transcript IDs: ENST00000318222.4, ENST00000465680.2, ENST00000528248.1, ENST00000532547.1

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCCTGTCCAGCCACAGCCCCTCCTGAAGGGCCCGGAGAGCCTCTaGACTACCCTGTCGGGATCCTGGAAGGTCCAGGTAGTAGCCACC +
Preference number: 1 (lower is better)
Translates to: APVQPQPLLKGPESL*TTLSGSWKVQVVAT
Trigger: GGTGGCTACTACCTGGACCTTCCAGGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCCCTTCAGGAGGGGCTGTGGCTGGACAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 90 bp CTCCTGAAGGGCCCGGAGAGCCTCTGCACTACCCTGTCGGGATCCTaGAAGGTCCAGGTAGTAGCCACCTCCGCTGTAGCTTGTGAGCCT +
Preference number: 1 (lower is better)
Translates to: LLKGPESLCTTLSGS*KVQVVATSAVACEP
Trigger: AGGCTCACAAGCTACAGCGGAGGTGGCTACTACCTGGACCTTCCAGGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCCCTTCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 90 bp GCTGCCGCAGCCTCGGAACCCCCAGCAGCATGTTCTCATAGTAGATaGAGGAGTGGGAGCCATGGCCCAGGCTCTGGTTGTTGTACCATT +
Preference number: 1 (lower is better)
Translates to: AAAASEPPAACSHSR*RSGSHGPGSGCCTI
Trigger: AATGGTACAACAACCAGAGCCTGGGCCATGGCTCCCACTCCTTCATCTACTATGAGAACATGCTGCTGGGGGTTCCGAGGCTGCGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp TCAGAATGTCCTCCCGGAAGTCTTCATGCACCACACAGGAGTCATTaGGGACCTTTAGCTGCCGCAGCCTCGGAACCCCCAGCAGCATGT +
Preference number: 1 (lower is better)
Translates to: SECPPGSLHAPHRSH*GPLAAAASEPPAAC
Trigger: ACATGCTGCTGGGGGTTCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGACTTCCGGGAGGACATTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp GTCTGCCAGAAGGCGAGGAACTCAAAGTCTGCATACGTGTTTGGCTaGTGCAGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGTTCGG +
Preference number: 1 (lower is better)
Translates to: VCQKARNSKSAYVFG*CRSFPMSRFTSRVR
Trigger: CCGAACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 90 bp AGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGTTCGGAATATGTaGAAGCCCACAGCCACAATGGAGAGCAAGATGACCACCAGGTCC +
Preference number: 1 (lower is better)
Translates to: RSFPMSRFTSRVRNM*KPTATMESKMTTRS
Trigger: GGACCTGGTGGTCATCTTGCTCTCCATTGTGGCTGTGGGCTTCCACATATTCCGAACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 90 bp CTGTGTCTGCCAGAAGGCGAGGAACTCAAAGTCTGCATACGTGTTTaGCTGCTGCAGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGT +
Preference number: 1 (lower is better)
Translates to: LCLPEGEELKVCIRV*LLQELPHEPIHLEG
Trigger: ACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp TGCCAGAAGGCGAGGAACTCAAAGTCTGCATACGTGTTTGGCTGCTaGAGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGTTCGGAAT +
Preference number: 1 (lower is better)
Translates to: CQKARNSKSAYVFGC*RSFPMSRFTSRVRN
Trigger: ATTCCGAACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp AAGGTGTTGGTGAAATCCTCAAACTGGATCTCCTGCTCCCCACCCTaGAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGACGC +
Preference number: 1 (lower is better)
Translates to: KVLVKSSNWISCSPP*RTFCTSETLSFLRR
Trigger: GCGTCTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCACCAACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 90 bp ACTCAAAGTCTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATaGGCCGATTCACCTCGAGGGTTCGGAATATGTGGAAGCCCACAG +
Preference number: 1 (lower is better)
Translates to: TQSLHTCLAAAGASP*ADSPRGFGICGSPQ
Trigger: CTGTGGGCTTCCACATATTCCGAACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp AAATCCTCAAACTGGATCTCCTGCTCCCCACCCTGCAGGACCTTCTaGACATCCGAAACCCTCTCCTTCCTCAGACGCAGTCTTAGTAGG +
Preference number: 1 (lower is better)
Translates to: KSSNWISCSPPCRTF*TSETLSFLRRSLSR
Trigger: CCTACTAAGACTGCGTCTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAGGAGATCCAGTTTGAGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 90 bp TCTGCGTGTCCCAGTTCCCTTAAGGTGTTGGTGAAATCCTCAAACTaGATCTCCTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAA +
Preference number: 1 (lower is better)
Translates to: SACPSSLKVLVKSSN*ISCSPPCRTFCTSE
Trigger: TTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCACCAACACCTTAAGGGAACTGGGACACGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp CATGTTGTTGTACTGTGTCTGCCAGAAGGCGAGGAACTCAAAGTCTaGATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGATT +
Preference number: 1 (lower is better)
Translates to: HVVVLCLPEGEELKV*IRVWLLQELPHEPI
Trigger: AATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 90 bp CGCTGTGCCATTGAAGGGCCCAAAGGGGAGTTGTTCTTCTTTGTCTaGAGAGTAGACATCATAGCAGCTCAGAATGTCCTCCCGGAAGTC +
Preference number: 1 (lower is better)
Translates to: RCAIEGPKGELFFFV*RVDIIAAQNVLPEV
Trigger: GACTTCCGGGAGGACATTCTGAGCTGCTATGATGTCTACTCTCCAGACAAAGAAGAACAACTCCCCTTTGGGCCCTTCAATGGCACAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 90 bp AAGCCCAGGATGTCCTTGGCACAGCGGGCCAGCGTGGAGGAGAGCTaGGTCATGGTTTTGTTGAAGCTGATGTACTTGAATATCTTGATC +
Preference number: 1 (lower is better)
Translates to: KPRMSLAQRASVEES*VMVLLKLMYLNILI
Trigger: GATCAAGATATTCAAGTACATCAGCTTCAACAAAACCATGACCCAGCTCTCCTCCACGCTGGCCCGCTGTGCCAAGGACATCCTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 90 bp AAGTTGCAGCTCATCCTTCTGTCCAGCCAGCTCCTCCTTGACCTCTaGATATGTGTCATTGATGATGGCCAGGAACATGTTCAGGAGCAC +
Preference number: 1 (lower is better)
Translates to: KLQLILLSSQLLLDL*ICVIDDGQEHVQEH
Trigger: GTGCTCCTGAACATGTTCCTGGCCATCATCAATGACACATATTCAGAGGTCAAGGAGGAGCTGGCTGGACAGAAGGATGAGCTGCAACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp CAGGCGAAGAAGAGGTTGACAGCATTCATGTTGTTGTACTGTGTCTaGCAGAAGGCGAGGAACTCAAAGTCTGCATACGTGTTTGGCTGC +
Preference number: 1 (lower is better)
Translates to: QAKKRLTAFMLLYCV*QKARNSKSAYVFGC
Trigger: GCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAACATGAATGCTGTCAACCTCTTCTTCGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 90 bp TCTCTGTCAAACTTGGTGAAGGTGGCCGTGAGCTCAGTGATTTCATaGTCTGCGTGTCCCAGTTCCCTTAAGGTGTTGGTGAAATCCTCA +
Preference number: 1 (lower is better)
Translates to: SLSNLVKVAVSSVIS*SACPSSLKVLVKSS
Trigger: TGAGGATTTCACCAACACCTTAAGGGAACTGGGACACGCAGAGCATGAAATCACTGAGCTCACGGCCACCTTCACCAAGTTTGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 90 bp TATGTAAGAAGAGCTCAGACATCACTTTGGTGTAGTAATAAGCACTaGAGCTTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGA +
Preference number: 1 (lower is better)
Translates to: YVRRAQTSLWCSNKH*SLSFHRSVDRCPPG
Trigger: TCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAAGCTCCAGTGCTTATTACTACACCAAAGTGATGTCTGAGCTCTTCTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
3UTR CCA 90 bp CTCCAGTGTCTGATGGAGTATGTAAGAAGAGCTCAGACATCACTTTaGTGTAGTAATAAGCACTGGAGCTTGTCATTCCATAGGTCAGTA +
Preference number: 1 (lower is better)
Translates to: LQCLMEYVRRAQTSL*CSNKHWSLSFHRSV
Trigger: TACTGACCTATGGAATGACAAGCTCCAGTGCTTATTACTACACCAAAGTGATGTCTGAGCTCTTCTTACATACTCCATCAGACACTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR GCA 90 bp CAGGTAGTAGCCACCTCCGCTGTAGCTTGTGAGCCTGCCCCAGTGGGAGAAGCCCCACACAGGAGTCATTaGGGACCTTTAGCTGCCGCA +
Preference number: 2 (lower is better)
Translates to: QVVATSAVACEPAPVGEAPHRSH*GPLAAA
Trigger: TGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGG...GGCTTCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGAGGTGGCTACTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp CTGAAACCCAGCCTCCTGCTCTGGCAGCCTCTGGACCCGATTTGCCTTGTGGGCGTCTGCATACGTGTTTaGCTGCTGCAGGAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: LKPSLLLWQPLDPICLVGVCIRV*LLQELP
Trigger: GGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGAC...GCCCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCAGGAGGCTGGGTTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 90 bp CTCAGAATGTCCTCCCGGAAGTCTTCATGCACCACACAGGAGTCATaGCGGACCTTTAGCTGCCGCAGCCTCGGAACCCCCAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: LRMSSRKSSCTTQES*RTFSCRSLGTPSSM
Trigger: CATGCTGCTGGGGGTTCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGACTTCCGGGAGGACATTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGTGTTCCAGATGCTGCTaGGGTAGCGAAGCCGGTGAA +
Preference number: 2 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQCSRCC*GSEAGE
Trigger: TTCACCGGCTTCGCTACCTCAGCAGCATCTGGAACA...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR GCA 90 bp AACTCAAAGTCTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGAGGCCCGGAGAGCCTCTaGACTACCCTGTCGGGATCC +
Preference number: 2 (lower is better)
Translates to: NSKSAYVFGCCRSFPMSRGPESL*TTLSGS
Trigger: GGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCC...TCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGATGCTGCTGATGGCCTaGAAGGAGACTCCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQMLLMA*KETPVS
Trigger: AGACACTGGAGTCTCCTTTCAGGCCATCAGCAGCAT...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp CAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTATAGCCACAGCCCCTCCTaGAGGGCCCGGAGAGCCTCT +
Preference number: 2 (lower is better)
Translates to: QDAVGIVDSIVVKVPEDYSHSPS*RARRAS
Trigger: AGAGGCTCTCCGGGCCCTTCAGGAGGGGCTGTGGCT...ATAATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp CCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGACGCAGAGCGTGGAGGAGAGCTaGGTCATGGTTTTGTTGAAG +
Preference number: 2 (lower is better)
Translates to: PTLQDLLHIRNPLLPQTQSVEES*VMVLLK
Trigger: CTTCAACAAAACCATGACCCAGCTCTCCTCCACGCT...CTGCGTCTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR GCA 90 bp CCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGACCCTGCAGGACCTTCTaGACATCCGAAACCCTCTCC +
Preference number: 2 (lower is better)
Translates to: PTASIWDTTPSRTVSSCRPCRTF*TSETLS
Trigger: GGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGG...TCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp AACTCAAAGTCTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGAGCGGATTTGCCAGGATaGGATGGCACCTCCTGTAGC +
Preference number: 2 (lower is better)
Translates to: NSKSAYVFGCCRSFPMSRADLPG*DGTSCS
Trigger: GCTACAGGAGGTGCCATCCCATCCTGGCAAATCCGC...TCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp CCTTCCTCAGACGCAGTCTTAGTAGGGTCTTGTTGTAGCCCTGTTTCAGGAGGTAGTCCGCCATGCTGCTaGTGGCCTGAAAGGAGACTC +
Preference number: 2 (lower is better)
Translates to: PSSDAVLVGSCCSPVSGGSPPCC*WPERRL
Trigger: GAGTCTCCTTTCAGGCCATCAGCAGCATGGCGGACT...ACCTCCTGAAACAGGGCTACAACAAGACCCTACTAAGACTGCGTCTGAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 90 bp ATGAAGGAGTGGGAGCCATGGCCCAGGCTCTGGTTGTTGTACCATTaGGTCCAATACAAACTGTCCAGTAGTGGGCCCTGGGCAAAATCC +
Preference number: 2 (lower is better)
Translates to: MKEWEPWPRLWLLYH*VQYKLSSSGPWAKS
Trigger: GGATTTTGCCCAGGGCCCACTACTGGACAGTTTGTATTGGACCAAATGGTACAACAACCAGAGCCTGGGCCATGGCTCCCACTCCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 90 bp AGCTCAGTGATTTCATGCTCTGCGTGTCCCAGTTCCCTTAAGGTGTaGGTGAAATCCTCAAACTGGATCTCCTGCTCCCCACCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SSVISCSACPSSLKV*VKSSNWISCSPPCR
Trigger: CCTGCAGGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCACCAACACCTTAAGGGAACTGGGACACGCAGAGCATGAAATCACTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGAGGATTATCCGGAACTaGGTGAAAATGCACTTGATG +
Preference number: 2 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQRIIRN*VKMHLM
Trigger: CATCAAGTGCATTTTCACTCAGTTCCGGATAATCCT...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp CCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGACCCTCAGGGTGGTCTTaGTATAAAGTTCCCGGTTCT +
Preference number: 2 (lower is better)
Translates to: PTASIWDTTPSRTVSSCRPSGWS*YKVPGS
Trigger: AGAACCGGGAACTTTATATCAAGACCACCCTGAGGG...TCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp AGCATTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGTCCACGCTGTGCCATTaGAGGGCCCAAAGGGGAGTT +
Preference number: 2 (lower is better)
Translates to: SIFSFEPTASIWDTTPSRSTLCH*RAQRGV
Trigger: AACTCCCCTTTGGGCCCTTCAATGGCACAGCGTGGA...CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp TCAGACGCAGTCTTAGTAGGGTCTTGTTGTAGCCCTGTTTCAGGAGGTCAGAAAAAGGAGTGGGAGCCATaGCCCAGGCTCTGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: SDAVLVGSCCSPVSGGQKKEWEP*PRLWLL
Trigger: CAACAACCAGAGCCTGGGCCATGGCTCCCACTCCTT...TTTCTGACCTCCTGAAACAGGGCTACAACAAGACCCTACTAAGACTGCGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp CAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTATACCCTGTCGGGATCCTaGAAGGTCCAGGTAGTAGCC +
Preference number: 2 (lower is better)
Translates to: QDAVGIVDSIVVKVPEDYTLSGS*KVQVVA
Trigger: GGCTACTACCTGGACCTTCCAGGATCCCGACAGGGT...ATAATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp GACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGAACTCTCCTTGTGAGCATGACCCGATTTGCCTTGTaGGCTGCTCACAATAGATCG +
Preference number: 2 (lower is better)
Translates to: DTTPSRTVSSCRTLLVSMTRFAL*AAHNRS
Trigger: CGATCTATTGTGAGCAGCCCACAAGGCAAATCGGGT...CATGCTCACAAGGAGAGTTCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp TTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGAGACTGAGAAGTCGATaGACACCACTCGAGTGCCCC +
Preference number: 2 (lower is better)
Translates to: FSALSLQHQSGTLLLPGQRLRSR*TPLECP
Trigger: GGGGCACTCGAGTGGTGTTCATCGACTTCTCAGTCT...CTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR GCA 90 bp AGCATTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGGCATACGTGTTTGGCTaGTGCAGGAGCTTCCCCATG +
Preference number: 2 (lower is better)
Translates to: SIFSFEPTASIWDTTPSRAYVFG*CRSFPM
Trigger: CATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGC...CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 90 bp TCCTTCTGTCCAGCCAGCTCCTCCTTGACCTCTGAATATGTGTCATaGATGATGGCCAGGAACATGTTCAGGAGCACGAAGAAGACGAAG +
Preference number: 2 (lower is better)
Translates to: SFCPASSSLTSEYVS*MMARNMFRSTKKTK
Trigger: CTTCGTCTTCTTCGTGCTCCTGAACATGTTCCTGGCCATCATCAATGACACATATTCAGAGGTCAAGGAGGAGCTGGCTGGACAGAAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR GCA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAATCCTTCATAGACTTTaGTCCGGGAGTGCCTCACAC +
Preference number: 2 (lower is better)
Translates to: FISWLKPTQFPGSVDQEAILHRL*SGSASH
Trigger: GTGTGAGGCACTCCCGGAGCAAAGTCTATGAAGGAT...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
3UTR-3UTR CCA 90 bp AGCATTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGGTGAAATCCTCAAACTaGATCTCCTGCTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: SIFSFEPTASIWDTTPSRVKSSN*ISCSPP
Trigger: GGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCAC...CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp GCCCAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATGCTCAGACATCACTTTaGTGTAGTAATAAGCACTGG +
Preference number: 2 (lower is better)
Translates to: AQDAVGIVDSIVVKVPEDAQTSL*CSNKHW
Trigger: CCAGTGCTTATTACTACACCAAAGTGATGTCTGAGC...ATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp AAGCAGGTAGCCGAGTTGGGCATAGGCGAAGAAAACAATGAAGAACATGACGGCATTGGCATTGTAGACTaGGAAGTCGATGAACACCAC +
Preference number: 2 (lower is better)
Translates to: KQVAELGIGEENNEEHDGIGIVD*EVDEHH
Trigger: GTGGTGTTCATCGACTTCTCAGTCTACAATGCCAAT...GCCGTCATGTTCTTCATTGTTTTCTTCGCCTATGCCCAACTCGGCTACCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR GCA 90 bp CTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAATCCTTCATAGACTTTaGTCCGGGAGTGCCTCACAC +
Preference number: 2 (lower is better)
Translates to: LHFYLLVKAHSVSRFSGPILHRL*SGSASH
Trigger: GTGTGAGGCACTCCCGGAGCAAAGTCTATGAAGGAT...TGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
3UTR CAA 90 bp AATATCTTGATCCAGGCGAAGAAGAGGTTGACAGCATTCATGTTGTaGTACTGTGTCTGCCAGAAGGCGAGGAACTCAAAGTCTGCATAC +
Preference number: 2 (lower is better)
Translates to: NILIQAKKRLTAFML*YCVCQKARNSKSAY
Trigger: GTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAACATGAATGCTGTCAACCTCTTCTTCGCCTGGATCAAGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 90 bp TTGAATATCTTGATCCAGGCGAAGAAGAGGTTGACAGCATTCATGTaGTTGTACTGTGTCTGCCAGAAGGCGAGGAACTCAAAGTCTGCA +
Preference number: 2 (lower is better)
Translates to: LNILIQAKKRLTAFM*LYCVCQKARNSKSA
Trigger: TGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAACATGAATGCTGTCAACCTCTTCTTCGCCTGGATCAAGATATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CCA 90 bp AAGCAGGTAGCCGAGTTGGGCATAGGCGAAGAAAACAATGAAGAACATGACGGCGGTTGTTGTACCATTTaGTCCAATACAAACTGTCCA +
Preference number: 2 (lower is better)
Translates to: KQVAELGIGEENNEEHDGGCCTI*SNTNCP
Trigger: TGGACAGTTTGTATTGGACCAAATGGTACAACAACC...GCCGTCATGTTCTTCATTGTTTTCTTCGCCTATGCCCAACTCGGCTACCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR TCA 90 bp TTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCACCCTCAGGGTGGTCTTaGTATAAAGTTCCCGGTTCT +
Preference number: 2 (lower is better)
Translates to: LSFHRSVDRCPPGTQYIPPSGWS*YKVPGS
Trigger: AGAACCGGGAACTTTATATCAAGACCACCCTGAGGG...TGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
3UTR GCA 72 bp CAGCCACAGCCCCTCCTGAAGGGCCCGGAGAGCCTCTaGACTACCCTGTCGGGATCCTGGAAGGTCCAGGTA +
Preference number: 3 (lower is better)
Translates to: QPQPLLKGPESL*TTLSGSWKVQV
Trigger: TACCTGGACCTTCCAGGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCCCTTCAGGAGGGGCTGTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 72 bp GGCCCGGAGAGCCTCTGCACTACCCTGTCGGGATCCTaGAAGGTCCAGGTAGTAGCCACCTCCGCTGTAGCT +
Preference number: 3 (lower is better)
Translates to: GPESLCTTLSGS*KVQVVATSAVA
Trigger: AGCTACAGCGGAGGTGGCTACTACCTGGACCTTCCAGGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 72 bp CCTCCCGGAAGTCTTCATGCACCACACAGGAGTCATTaGGGACCTTTAGCTGCCGCAGCCTCGGAACCCCCA +
Preference number: 3 (lower is better)
Translates to: PPGSLHAPHRSH*GPLAAAASEPP
Trigger: TGGGGGTTCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGACTTCCGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 72 bp GCCTCGGAACCCCCAGCAGCATGTTCTCATAGTAGATaGAGGAGTGGGAGCCATGGCCCAGGCTCTGGTTGT +
Preference number: 3 (lower is better)
Translates to: ASEPPAACSHSR*RSGSHGPGSGC
Trigger: ACAACCAGAGCCTGGGCCATGGCTCCCACTCCTTCATCTACTATGAGAACATGCTGCTGGGGGTTCCGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 72 bp TCATGCACCACACAGGAGTCATTGCGGACCTTTAGCTaGCGCAGCCTCGGAACCCCCAGCAGCATGTTCTCA +
Preference number: 3 (lower is better)
Translates to: SCTTQESLRTFS*RSLGTPSSMFS
Trigger: TGAGAACATGCTGCTGGGGGTTCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp CTGAAACCCAGCCTCCTGCTCTGGCAGCCTCTGGACCCGATTTGCCTTGTGGGCCAGGCGAAGAAGAGGTaGACAGCATTCATGTTGTTG +
Preference number: 3 (lower is better)
Translates to: LKPSLLLWQPLDPICLVGQAKKR*TAFMLL
Trigger: CAACAACATGAATGCTGTCAACCTCTTCTTCGCCTG...GCCCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCAGGAGGCTGGGTTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 72 bp GCGAGGAACTCAAAGTCTGCATACGTGTTTGGCTGCTaGAGGAGCTTCCCCATGAGCCGATTCACCTCGAGG +
Preference number: 3 (lower is better)
Translates to: ARNSKSAYVFGC*RSFPMSRFTSR
Trigger: CCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 72 bp GGGAGCCATGGCCCAGGCTCTGGTTGTTGTACCATTTaGTCCAATACAAACTGTCCAGTAGTGGGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: GSHGPGSGCCTI*SNTNCPVVGPG
Trigger: CCCAGGGCCCACTACTGGACAGTTTGTATTGGACCAAATGGTACAACAACCAGAGCCTGGGCCATGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 72 bp CTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATaGGCCGATTCACCTCGAGGGTTCGGAATATGTGGA +
Preference number: 3 (lower is better)
Translates to: LHTCLAAAGASP*ADSPRGFGICG
Trigger: TCCACATATTCCGAACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 72 bp AAGGCGAGGAACTCAAAGTCTGCATACGTGTTTGGCTaGTGCAGGAGCTTCCCCATGAGCCGATTCACCTCG +
Preference number: 3 (lower is better)
Translates to: KARNSKSAYVFG*CRSFPMSRFTS
Trigger: CGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 72 bp GTGAAATCCTCAAACTGGATCTCCTGCTCCCCACCCTaGAGGACCTTCTGCACATCCGAAACCCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: VKSSNWISCSPP*RTFCTSETLSF
Trigger: GAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 72 bp CCCATGAGCCGATTCACCTCGAGGGTTCGGAATATGTaGAAGCCCACAGCCACAATGGAGAGCAAGATGACC +
Preference number: 3 (lower is better)
Translates to: PMSRFTSRVRNM*KPTATMESKMT
Trigger: GGTCATCTTGCTCTCCATTGTGGCTGTGGGCTTCCACATATTCCGAACCCTCGAGGTGAATCGGCTCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 72 bp CCCAGTTCCCTTAAGGTGTTGGTGAAATCCTCAAACTaGATCTCCTGCTCCCCACCCTGCAGGACCTTCTGC +
Preference number: 3 (lower is better)
Translates to: PSSLKVLVKSSN*ISCSPPCRTFC
Trigger: GCAGAAGGTCCTGCAGGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCACCAACACCTTAAGGGAACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp CTGAAACCCAGCCTCCTGCTCTGGCAGCCTCTGGACCCGATTTGCCTTGTGGGCTTGAAGCTGATGTACTaGAATATCTTGATCCAGGCG +
Preference number: 3 (lower is better)
Translates to: LKPSLLLWQPLDPICLVGLKLMY*NILIQA
Trigger: CGCCTGGATCAAGATATTCAAGTACATCAGCTTCAA...GCCCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCAGGAGGCTGGGTTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 72 bp CATGCTCTGCGTGTCCCAGTTCCCTTAAGGTGTTGGTaGAATCCTCAAACTGGATCTCCTGCTCCCCACCCT +
Preference number: 3 (lower is better)
Translates to: HALRVPVPLRCW*NPQTGSPAPHP
Trigger: AGGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCACCAACACCTTAAGGGAACTGGGACACGCAGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR GCA 72 bp CAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTaGAGAAGATCCTTCATAGACTTTGCTCCGGGAGTG +
Preference number: 3 (lower is better)
Translates to: QFPGSVDQEAAS*RRSFIDFAPGV
Trigger: CACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
3UTR GCA 72 bp GTACTGTGTCTGCCAGAAGGCGAGGAACTCAAAGTCTaGATACGTGTTTGGCTGCTGCAGGAGCTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: VLCLPEGEELKV*IRVWLLQELPH
Trigger: ATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACACAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp GCCCAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTGGCCCAGGCTCTGGTaGTTGTACCATTTGGTCCAA +
Preference number: 3 (lower is better)
Translates to: AQDAVGIVDSIVVKVPEDWPRLW*LYHLVQ
Trigger: TTGGACCAAATGGTACAACAACCAGAGCCTGGGCCA...ATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp TGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGACGCAGTCTTAGTAAGCAGGTAGCCGAGTaGGGCATAGGCGAAGAAAAC +
Preference number: 3 (lower is better)
Translates to: CRTFCTSETLSFLRRSLSKQVAE*GIGEEN
Trigger: GTTTTCTTCGCCTATGCCCAACTCGGCTACCTGCTT...ACTAAGACTGCGTCTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp GACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGAACTCTCCTTGTGAGCATGCCAGCCAGCTCCTCCTaGACCTCTGAATATGTGTCA +
Preference number: 3 (lower is better)
Translates to: DTTPSRTVSSCRTLLVSMPASSS*TSEYVS
Trigger: TGACACATATTCAGAGGTCAAGGAGGAGCTGGCTGG...CATGCTCACAAGGAGAGTTCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 72 bp TGTTCAGGAGCACGAAGAAGACGAAGAAGACATAGGTaGCAAAGTAGGCAGGGCCCAGGATGCGGTTGGCAT +
Preference number: 3 (lower is better)
Translates to: CSGARRRRRRHR*QSRQGPGCGWH
Trigger: ATGCCAACCGCATCCTGGGCCCTGCCTACTTTGTCACCTATGTCTTCTTCGTCTTCTTCGTGCTCCTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 72 bp AGCCAGCCACCCCTTCCTCTCCAGCATTTTCAGCTTTaGGCCTACAGCATCAATCTGGGACACTACTCCTTC +
Preference number: 3 (lower is better)
Translates to: SQPPLPLQHFQL*AYSINLGHYSF
Trigger: GAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCTGGAGAGGAAGGGGTGGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 72 bp ATGTCCTTGGCACAGCGGGCCAGCGTGGAGGAGAGCTaGGTCATGGTTTTGTTGAAGCTGATGTACTTGAAT +
Preference number: 3 (lower is better)
Translates to: MSLAQRASVEES*VMVLLKLMYLN
Trigger: ATTCAAGTACATCAGCTTCAACAAAACCATGACCCAGCTCTCCTCCACGCTGGCCCGCTGTGCCAAGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp CAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTATCTTGACTGTGCGGATTaGCCAGGATGGGATGGCACC +
Preference number: 3 (lower is better)
Translates to: QDAVGIVDSIVVKVPEDYLDCAD*PGWDGT
Trigger: GGTGCCATCCCATCCTGGCAAATCCGCACAGTCAAG...ATAATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 72 bp TCCAGCATTTTCAGCTTTGAGCCTACAGCATCAATCTaGGACACTACTCCTTCCAGGACAGTCTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: SSIFSFEPTASI*DTTPSRTVSSC
Trigger: GCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp AGCATTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGCCCAGGCTCTGGTTGTaGTACCATTTGGTCCAATAC +
Preference number: 3 (lower is better)
Translates to: SIFSFEPTASIWDTTPSRPRLWL*YHLVQY
Trigger: GTATTGGACCAAATGGTACAACAACCAGAGCCTGGG...CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp GACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGAACTCTCCTTGTGAGCATGATGTACTTGAATATCTaGATCCAGGCGAAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: DTTPSRTVSSCRTLLVSMMYLNI*IQAKKR
Trigger: CCTCTTCTTCGCCTGGATCAAGATATTCAAGTACAT...CATGCTCACAAGGAGAGTTCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp CCTTCCTCAGACGCAGTCTTAGTAGGGTCTTGTTGTAGCCCTGTTTCAGGAGGTAATAAGCACTGGAGCTaGTCATTCCATAGGTCAGTA +
Preference number: 3 (lower is better)
Translates to: PSSDAVLVGSCCSPVSGGNKHWS*SFHRSV
Trigger: TACTGACCTATGGAATGACAAGCTCCAGTGCTTATT...ACCTCCTGAAACAGGGCTACAACAAGACCCTACTAAGACTGCGTCTGAGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CCA 72 bp ATTGAAGGGCCCAAAGGGGAGTTGTTCTTCTTTGTCTaGAGAGTAGACATCATAGCAGCTCAGAATGTCCTC +
Preference number: 3 (lower is better)
Translates to: IEGPKGELFFFV*RVDIIAAQNVL
Trigger: GAGGACATTCTGAGCTGCTATGATGTCTACTCTCCAGACAAAGAAGAACAACTCCCCTTTGGGCCCTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR-3UTR CAA 90 bp CAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTATTGGTTGTTGTACCATTaGGTCCAATACAAACTGTCC +
Preference number: 3 (lower is better)
Translates to: QDAVGIVDSIVVKVPEDYWLLYH*VQYKLS
Trigger: GGACAGTTTGTATTGGACCAAATGGTACAACAACCA...ATAATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR TCA 72 bp ACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTaGTATAAAGTTCCCGGTTCTCAGCTGTGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: TQYIPTAPSGWS*YKVPGSQLCSQ
Trigger: CTGAGAACACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532547.1
3UTR-3UTR CAA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAACCTGAGTTCATTTCCTaGCCTGATTCCCTTCAGGCT +
Preference number: 3 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMEPEFIS*PDSLQA
Trigger: AGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGG...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
3UTR CCA 72 bp AGAGCTCAGACATCACTTTGGTGTAGTAATAAGCACTaGAGCTTGTCATTCCATAGGTCAGTAGACAGATGT +
Preference number: 3 (lower is better)
Translates to: RAQTSLWCSNKH*SLSFHRSVDRC
Trigger: ACATCTGTCTACTGACCTATGGAATGACAAGCTCCAGTGCTTATTACTACACCAAAGTGATGTCTGAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
3UTR CCA 72 bp CTGATGGAGTATGTAAGAAGAGCTCAGACATCACTTTaGTGTAGTAATAAGCACTGGAGCTTGTCATTCCAT +
Preference number: 3 (lower is better)
Translates to: LMEYVRRAQTSL*CSNKHWSLSFH
Trigger: ATGGAATGACAAGCTCCAGTGCTTATTACTACACCAAAGTGATGTCTGAGCTCTTCTTACATACTCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
3UTR CCA 72 bp TTATTGATAGCCACCATGGAAACCCACATGGTCTTATaGAAGAATAATGTCAGAACCCACCACATATTAATT +
Preference number: 3 (lower is better)
Translates to: LLIATMETHMVL*KNNVRTHHILI
Trigger: AATTAATATGTGGTGGGTTCTGACATTATTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR GCA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGGGCCCGGAGAGCCTCTaGACTACCCTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQGPESL*TTLSGS
Trigger: GGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCC...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp CCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGACGCAGCACAGCGGGCCAGCGTaGAGGAGAGCTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: PTLQDLLHIRNPLLPQTQHSGPA*RRAGSW
Trigger: CCATGACCCAGCTCTCCTCCACGCTGGCCCGCTGTG...CTGCGTCTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp GACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGAGCCACAGCCCCTCCTaGAGGGCCCGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DQEAASCRRSFIDFAPGVSHSPS*RARRAS
Trigger: AGAGGCTCTCCGGGCCCTTCAGGAGGGGCTGTGGCT...CACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
3UTR CAA 72 bp TCCTCCCGGAAGTCTTCATGCACCACACAGGAGTCATaGCGGACCTTTAGCTGCCGCAGCCTCGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: SSRKSSCTTQES*RTFSCRSLGTP
Trigger: GGGGGTTCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGACTTCCGGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp CAGGTAGTAGCCACCTCCGCTGTAGCTTGTGAGCCTGCCCCAGTGGGAGAAGCCTCCAGTAGTGGGCCCTaGGCAAAATCCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QVVATSAVACEPAPVGEASSSGP*AKSQKS
Trigger: GGACTTCTGGGATTTTGCCCAGGGCCCACTACTGGA...GGCTTCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGAGGTGGCTACTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 72 bp ACCCAGCCTCCTGCTCTGGCAGCCTCTGGACCCGATTaGCCTTGTGGGCTGCTCACAATAGATCGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: TQPPALAASGPD*PCGLLTIDRPS
Trigger: ACTAGGCCGATCTATTGTGAGCAGCCCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCAGGAGGCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp AGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATGCTGGAGAGGCCCCGTaGTGGAGATGGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: SPLSFQVQWTRRQPLAEDAGEAP*WRWCRL
Trigger: GAGTCTGCACCATCTCCAGCACGGGGCCTCTCCAGC...ATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp AGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATTCAGGCTTCTTGGGTTaGGGCTGGAGAGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SPLSFQVQWTRRQPLAEDSGFLG*GWRGPV
Trigger: CACGGGGCCTCTCCAGCCCCAACCCAAGAAGCCTGA...ATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGGTCTGCATACGTGTTTaGCTGCTGCAGGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQVCIRV*LLQELP
Trigger: GGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGAC...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp AACTCAAAGTCTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGACTCCGCTGTAGCTTGTaGGCCTGCCCCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NSKSAYVFGCCRSFPMSRLRCSL*ACPSGR
Trigger: TCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGAG...TCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CAGGTAGTAGCCACCTCCGCTGTAGCTTGTGAGCCTGCCCCAGTGGGAGAAGCCCAATGGAGAGCAAGATaGCCACCAGGTCCAGTATGT +
Preference number: 4 (lower is better)
Translates to: QVVATSAVACEPAPVGEAQWRAR*PPGPVC
Trigger: ACATACTGGACCTGGTGGTCATCTTGCTCTCCATTG...GGCTTCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGAGGTGGCTACTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp GTGTCTGCCAGAAGGCGAGGAACTCAAAGTCTGCATACGTGTTTGGCTGCTGCATTGCGGACCTTTAGCTaGCGCAGCCTCGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: VSARRRGTQSLHTCLAAALRTFS*RSLGTP
Trigger: GGGGGTTCCGAGGCTGCGGCAGCTAAAGGTCCGCAA...TGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp TACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGTTCCCTGCAGGACCTTCTaGACATCCGAAACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YVFGCCRSFPMSRFTSRVPCRTF*TSETLS
Trigger: GGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGG...AACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGTTCTTGGGTTGGGGCTaGAGAGGCCCCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPFLGWG*RGPVLE
Trigger: CTCCAGCACGGGGCCTCTCCAGCCCCAACCCAAGAA...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CTGAAACCCAGCCTCCTGCTCTGGCAGCCTCTGGACCCGATTTGCCTTGTGGGCAGCGTGGAGGAGAGCTaGGTCATGGTTTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LKPSLLLWQPLDPICLVGSVEES*VMVLLK
Trigger: CTTCAACAAAACCATGACCCAGCTCTCCTCCACGCT...GCCCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCAGGAGGCTGGGTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp TCTTCATGCACCACACAGGAGTCATTGCGGACCTTTAGCTGCCGCAGCCTCGGATGTTCCAGATGCTGCTaGGGTAGCGAAGCCGGTGAA +
Preference number: 4 (lower is better)
Translates to: SSCTTQESLRTFSCRSLGCSRCC*GSEAGE
Trigger: TTCACCGGCTTCGCTACCTCAGCAGCATCTGGAACA...TCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGCAGCCAGCTCCTCCTTaGCCTCTGAATATGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQQPAPP*PLNMCH
Trigger: ATGACACATATTCAGAGGTCAAGGAGGAGCTGGCTG...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp TCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTGCCCGGTACCCCAGGTaGCCACTCTCAGCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRFSGPGGSLLQKILHRLARYPR*PLSARG
Trigger: TCCTCTAGCTGAGAGTGGGCACCTGGGGTACCGGGC...AAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp CCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTTTGCGGACCTTTAGCTaGCGCAGCCTCGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: PGSVDQEAASCRRSFIDFLRTFS*RSLGTP
Trigger: GGGGGTTCCGAGGCTGCGGCAGCTAAAGGTCCGCAA...AAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCTCCTGCTCCCCACCCTaGAGGACCTTCTGCACATCC +
Preference number: 4 (lower is better)
Translates to: YLLVKAHSVSRFSGPGGSSCSPP*RTFCTS
Trigger: GGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAGGA...GCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp GCCCAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTCCTGCTCCCCACCCTaGAGGACCTTCTGCACATCC +
Preference number: 4 (lower is better)
Translates to: AQDAVGIVDSIVVKVPEDSCSPP*RTFCTS
Trigger: GGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAGGA...ATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp GGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGCCTCATGCTCTGGCAGCCTCTaGACCCGATTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GGSLLQKILHRLCSGSASCSGSL*TRFALW
Trigger: CCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCA...TGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTTTGTTCCTTCACGCCTaGGGAGGGAGCCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: PGSVDQEAASCRRSFIDFLFLHA*GGSQPP
Trigger: GGGTGGCTGGCTCCCTCCCCAGGCGTGAAGGAACAA...AAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TCTTCATGCACCACACAGGAGTCATTGCGGACCTTTAGCTGCCGCAGCCTCGGAATGCTGCTGATGGCCTaGAAGGAGACTCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSCTTQESLRTFSCRSLGMLLMA*KETPVS
Trigger: AGACACTGGAGTCTCCTTTCAGGCCATCAGCAGCAT...TCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CTGAAACCCAGCCTCCTGCTCTGGCAGCCTCTGGACCCGATTTGCCTTGTGGGCATTGGCATTGTAGACTaGGAAGTCGATGAACACCAC +
Preference number: 4 (lower is better)
Translates to: LKPSLLLWQPLDPICLVGIGIVD*EVDEHH
Trigger: GTGGTGTTCATCGACTTCTCAGTCTACAATGCCAAT...GCCCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCAGGAGGCTGGGTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp ACTGTGCGGATTTGCCAGGATGGGATGGCACCTCCTGTAGCTGGAAACTCCACCCGAAGAAGACATAGGTaGCAAAGTAGGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TVRICQDGMAPPVAGNSTRRRHR*QSRQGP
Trigger: TGGGCCCTGCCTACTTTGTCACCTATGTCTTCTTCG...GGTGGAGTTTCCAGCTACAGGAGGTGCCATCCCATCCTGGCAAATCCGCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp TACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAGCTGTGCCCGGTACCCCAGGTaGCCACTCTCAGCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: YQQLPQGGLDIKFPVLSCARYPR*PLSARG
Trigger: TCCTCTAGCTGAGAGTGGGCACCTGGGGTACCGGGC...ACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR GCA 90 bp GGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACGGCCCGGAGAGCCTCTaGACTACCCTGTCGGGATCC +
Preference number: 4 (lower is better)
Translates to: GSIFISWLKPTQFPGSVDGPESL*TTLSGS
Trigger: GGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCC...GTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGCCCTGCAGGACCTTCTaGACATCCGAAACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPPCRTF*TSETLS
Trigger: GGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGG...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp GCCCAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATGGGGCTGGCTGCGGGTaGTTCCAAATAGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: AQDAVGIVDSIVVKVPEDGAGCG*FQIACS
Trigger: GGAACAAGCTATTTGGAAGCACCCGCAGCCAGCCCC...ATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp GGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTGGAGAGGCCCCGTGCTaGAGATGGTGCAGACTCTCA +
Preference number: 4 (lower is better)
Translates to: GSVDQEAASCRRSFIDFAGEAPC*RWCRLS
Trigger: TGAGAGTCTGCACCATCTCCAGCACGGGGCCTCTCC...AGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp GTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTTCTTGGGTTGGGGCTaGAGAGGCCCCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VDRCPPGTQYIPTAPSGWFLGWG*RGPVLE
Trigger: CTCCAGCACGGGGCCTCTCCAGCCCCAACCCAAGAA...CCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CCA 90 bp AGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATTCCAGTAGTGGGCCCTaGGCAAAATCCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPLSFQVQWTRRQPLAEDSSSGP*AKSQKS
Trigger: GGACTTCTGGGATTTTGCCCAGGGCCCACTACTGGA...ATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGCGGATTTGCCAGGATaGGATGGCACCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPADLPG*DGTSCS
Trigger: GCTACAGGAGGTGCCATCCCATCCTGGCAAATCCGC...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp GGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGCCTCAGTCTGCATACGTGTTTaGCTGCTGCAGGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GGSLLQKILHRLCSGSASVCIRV*LLQELP
Trigger: GGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGAC...TGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CCTTCCTCAGACGCAGTCTTAGTAGGGTCTTGTTGTAGCCCTGTTTCAGGAGGTGGTCACAGCTGGGGCTaGCTGCGGGTGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PSSDAVLVGSCCSPVSGGGHSWG*LRVLPN
Trigger: ATTTGGAAGCACCCGCAGCCAGCCCCAGCTGTGACC...ACCTCCTGAAACAGGGCTACAACAAGACCCTACTAAGACTGCGTCTGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp AATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAGCCACAGCCCCTCCTaGAGGGCCCGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: NIYQQLPQGGLDIKFPVLSHSPS*RARRAS
Trigger: AGAGGCTCTCCGGGCCCTTCAGGAGGGGCTGTGGCT...GAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp GACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGAACTCTCCTTGTGAGCATGCATAGCGGATCAGCTTaGCTGTGCGGATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DTTPSRTVSSCRTLLVSMHSGSA*LCGFAR
Trigger: CCTGGCAAATCCGCACAGTCAAGCTGATCCGCTATG...CATGCTCACAAGGAGAGTTCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGCCCTTAAGGTGTTGGTaGAATCCTCAAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQPLRCW*NPQTGS
Trigger: AGATCCAGTTTGAGGATTTCACCAACACCTTAAGGG...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp TCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTACAGCTGGGGCTGGCTaGGGGTGCTTCCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: SRFSGPGGSLLQKILHRLTAGAG*GCFQIA
Trigger: AGCTATTTGGAAGCACCCGCAGCCAGCCCCAGCTGT...AAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp AGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCTGTATGCCGTCTCCTaGGGTTCATCTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SPLSFQVQWTRRQPLAEDLYAVS*GSSSGF
Trigger: GAAGCCTGAAGATGAACCCCAGGAGACGGCATACAG...ATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp GACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGCTGTATGCCGTCTCCTaGGGTTCATCTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: DQEAASCRRSFIDFAPGVLYAVS*GSSSGF
Trigger: GAAGCCTGAAGATGAACCCCAGGAGACGGCATACAG...CACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGCACAGCGGGCCAGCGTaGAGGAGAGCTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEHSGPA*RRAGSW
Trigger: CCATGACCCAGCTCTCCTCCACGCTGGCCCGCTGTG...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp GTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGTTGTTCCTTCACGCCTaGGGAGGGAGCCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: VSRQMSTRNTIYTNSSLRLFLHA*GGSQPP
Trigger: GGGTGGCTGGCTCCCTCCCCAGGCGTGAAGGAACAA...CCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGAGTCCTCTGATGCCTTaGCAGATATGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPSPLMP*QIWRQQ
Trigger: CTGCTGCCTCCATATCTGTCAAGGCATCAGAGGACT...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp CATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCGCTGGAGAGGCCCCGTaGTGGAGATGGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: HRSVDRCPPGTQYIPTAPAGEAP*WRWCRL
Trigger: GAGTCTGCACCATCTCCAGCACGGGGCCTCTCCAGC...GGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR GCA 90 bp AACTCAAAGTCTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGATTGACTGTGCGGATTTaGCAGGATGGGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: NSKSAYVFGCCRSFPMSRLTVRI*QDGMAP
Trigger: AGGTGCCATCCCATCCTGGCAAATCCGCACAGTCAA...TCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp TACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAGCTGTACAGCTGGGGCTGGCTaGGGGTGCTTCCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: YQQLPQGGLDIKFPVLSCTAGAG*GCFQIA
Trigger: AGCTATTTGGAAGCACCCGCAGCCAGCCCCAGCTGT...ACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCCCCGTGCTGGAGATaGTGCAGACTCTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEAPCWR*CRLSAS
Trigger: GGACGCTGAGAGTCTGCACCATCTCCAGCACGGGGC...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp GTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGCAGCAGCTGGACACCTaGGTCCTGTATGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSRQMSTRNTIYTNSSLRQQLDT*VLYAVS
Trigger: GGAGACGGCATACAGGACCCAGGTGTCCAGCTGCTG...CCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp AACTCAAAGTCTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGAAACTCATCCTGCGAGTaGTATGTCCACGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: NSKSAYVFGCCRSFPMSRNSSCE*YVHAVP
Trigger: TGGCACAGCGTGGACATACCACTCGCAGGATGAGTT...TCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGGCACCTCCTGTAGCTaGAAACTCCACCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: FISWLKPTQFPGSVDQEAGTSCS*KLHHQP
Trigger: AGGCTGGTGGTGGAGTTTCCAGCTACAGGAGGTGCC...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp AGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTGCTCTGGCAGCCTCTaGACCCGATTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RQMSTRNTIYTNSSLRVVCSGSL*TRFALW
Trigger: CCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCA...GACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 72 bp GAGCCAGCCACCCCTTCCTCTCCAGCATTTTCAGCTTaGAGCCTACAGCATCAATCTGGGACACTACTCCTT +
Preference number: 4 (lower is better)
Translates to: EPATPSSPAFSA*SLQHQSGTLLL
Trigger: AAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCTGGAGAGGAAGGGGTGGCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp TTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGTCCACGCTGTGCCATTaGAGGGCCCAAAGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FSALSLQHQSGTLLLPGQSTLCH*RAQRGV
Trigger: AACTCCCCTTTGGGCCCTTCAATGGCACAGCGTGGA...CTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp AGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCAGACTGAGAAGTCGATaGACACCACTCGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RQMSTRNTIYTNSSLRVVRLRSR*TPLECP
Trigger: GGGGCACTCGAGTGGTGTTCATCGACTTCTCAGTCT...GACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGCAATGGAGAGCAAGATaGCCACCAGGTCCAGTATGT +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPQWRAR*PPGPVC
Trigger: ACATACTGGACCTGGTGGTCATCTTGCTCTCCATTG...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGCAGGAGCTTCCCCATaGGCCGATTCACCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: FRLHFYLLVKAHSVSRFSAGASP*ADSPRG
Trigger: CCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGC...ACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp CACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTGCAGGAGCTTCCCCATaGGCCGATTCACCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: HNIYQQLPQGGLDIKFPVAGASP*ADSPRG
Trigger: CCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGC...AACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp GACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGGTTCATTTCCTTGCCTaGTTCCCTTCAGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: DQEAASCRRSFIDFAPGVVHFLA*FPSGSI
Trigger: AATGGAGCCTGAAGGGAATCAGGCAAGGAAATGAAC...CACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR GCA 90 bp AGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCAGCTTTTGCAGCTCCTaGCCCTCAGGACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: RQMSTRNTIYTNSSLRVVSFCSS*PSGLPT
Trigger: TGTGGGAAGTCCTGAGGGGCAGGAGCTGCAAAAGCT...GACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR GCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGATCCTTCATAGACTTTaGTCCGGGAGTGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPILHRL*SGSASH
Trigger: GTGTGAGGCACTCCCGGAGCAAAGTCTATGAAGGAT...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR GCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGCAGGAGGCAGCCTCTTaGAGAAGATCCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPQEAAS*RRSFID
Trigger: GTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTG...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCACAGCAGCTGGACACCTaGGTCCTGTATGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPQQLDT*VLYAVS
Trigger: GGAGACGGCATACAGGACCCAGGTGTCCAGCTGCTG...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGCAGCAGCTGGACACCTaGGTCCTGTATGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEQQLDT*VLYAVS
Trigger: GGAGACGGCATACAGGACCCAGGTGTCCAGCTGCTG...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp AAGCAGGTAGCCGAGTTGGGCATAGGCGAAGAAAACAATGAAGAACATGACGGCTATGGAGGCAGCAGCTaGACACCTGGGTCCTGTATG +
Preference number: 4 (lower is better)
Translates to: KQVAELGIGEENNEEHDGYGGSS*TPGSCM
Trigger: CATACAGGACCCAGGTGTCCAGCTGCTGCCTCCATA...GCCGTCATGTTCTTCATTGTTTTCTTCGCCTATGCCCAACTCGGCTACCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp GGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACAAGGAGTGGGAGCCATaGCCCAGGCTCTGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSIFISWLKPTQFPGSVDKEWEP*PRLWLL
Trigger: CAACAACCAGAGCCTGGGCCATGGCTCCCACTCCTT...GTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp AGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGACCCTGTCGGGATCCTaGAAGGTCCAGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SRQMSTRNTIYTNSSLRVTLSGS*KVQVVA
Trigger: GGCTACTACCTGGACCTTCCAGGATCCCGACAGGGT...CACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp TTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGGGCACCTCCTGTAGCTaGAAACTCCACCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSALSLQHQSGTLLLPGQGTSCS*KLHHQP
Trigger: AGGCTGGTGGTGGAGTTTCCAGCTACAGGAGGTGCC...CTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp AGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGCGGATTTGCCAGGATaGGATGGCACCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SRQMSTRNTIYTNSSLRVADLPG*DGTSCS
Trigger: GCTACAGGAGGTGCCATCCCATCCTGGCAAATCCGC...CACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp CCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGTGAAATCCTCAAACTaGATCTCCTGCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PGSVDQEAASCRRSFIDFVKSSN*ISCSPP
Trigger: GGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCAC...AAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CCTTCCTCAGACGCAGTCTTAGTAGGGTCTTGTTGTAGCCCTGTTTCAGGAGGTGTGAAATCCTCAAACTaGATCTCCTGCTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PSSDAVLVGSCCSPVSGGVKSSN*ISCSPP
Trigger: GGGTGGGGAGCAGGAGATCCAGTTTGAGGATTTCAC...ACCTCCTGAAACAGGGCTACAACAAGACCCTACTAAGACTGCGTCTGAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp GGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTACTCCTCTGCAACGTTaGAATCTCACCACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSVDQEAASCRRSFIDFATPLQR*NLTTGE
Trigger: CTCTCCCGTGGTGAGATTCCAACGTTGCAGAGGAGT...AGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp GTGGGAGCCATGGCCCAGGCTCTGGTTGTTGTACCATTTGGTCCAATACAAACTACTCCTCTGCAACGTTaGAATCTCACCACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VGAMAQALVVVPFGPIQTTPLQR*NLTTGE
Trigger: CTCTCCCGTGGTGAGATTCCAACGTTGCAGAGGAGT...AGTTTGTATTGGACCAAATGGTACAACAACCAGAGCCTGGGCCATGGCTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCAGTCCGCCATGCTGCTaGTGGCCTGAAAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: HRSVDRCPPGTQYIPTAPSPPCC*WPERRL
Trigger: GAGTCTCCTTTCAGGCCATCAGCAGCATGGCGGACT...GGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCATCCACGCTGTGCCATTaGAGGGCCCAAAGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPSTLCH*RAQRGV
Trigger: AACTCCCCTTTGGGCCCTTCAATGGCACAGCGTGGA...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTCAGCCAGCTCCTCCTTaGCCTCTGAATATGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SRFSGPGGSLLQKILHRLQPAPP*PLNMCH
Trigger: ATGACACATATTCAGAGGTCAAGGAGGAGCTGGCTG...AAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp CTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCACACCTGGGTCCTGTATaGCGTCTCCTGGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LHFYLLVKAHSVSRFSGPHLGPV*RLLGFI
Trigger: GATGAACCCCAGGAGACGGCATACAGGACCCAGGTG...TGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR GCA 90 bp TCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTCCCGGAAGTCTTCATaGACCACACAGGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: SRFSGPGGSLLQKILHRLSRKSS*TTQESL
Trigger: CAATGACTCCTGTGTGGTGCATGAAGACTTCCGGGA...AAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp ATTTGGTCCAATACAAACTGTCCAGTAGTGGGCCCTGGGCAAAATCCCAGAAGTGCATACGTGTTTGGCTaGTGCAGGAGCTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: IWSNTNCPVVGPGQNPRSAYVFG*CRSFPM
Trigger: CATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGC...ACTTCTGGGATTTTGCCCAGGGCCCACTACTGGACAGTTTGTATTGGACCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp GTGTCTGCCAGAAGGCGAGGAACTCAAAGTCTGCATACGTGTTTGGCTGCTGCATTGTTGTACTGTGTCTaGCAGAAGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: VSARRRGTQSLHTCLAAALLYCV*QKARNS
Trigger: TGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAA...TGCAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTCGCCTTCTGGCAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp TATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCAGGAGGTCAGAAAGTTaGAGCTCATCCTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: YLLVKAHSVSRFSGPGGSRRSES*SSSFCP
Trigger: TGGACAGAAGGATGAGCTGCAACTTTCTGACCTCCT...GCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp AACTCAAAGTCTGCATACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGAAGGAGGTCAGAAAGTTaGAGCTCATCCTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: NSKSAYVFGCCRSFPMSRRRSES*SSSFCP
Trigger: TGGACAGAAGGATGAGCTGCAACTTTCTGACCTCCT...TCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACTTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp AAGCAGGTAGCCGAGTTGGGCATAGGCGAAGAAAACAATGAAGAACATGACGGCAGGACAGTCTCCAGCTaGAGAACTCTCCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KQVAELGIGEENNEEHDGRTVSS*RTLLVS
Trigger: GCTCACAAGGAGAGTTCTGCAGCTGGAGACTGTCCT...GCCGTCATGTTCTTCATTGTTTTCTTCGCCTATGCCCAACTCGGCTACCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGGGGCTGGCTGCGGGTaGTTCCAAATAGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEGAGCG*FQIACS
Trigger: GGAACAAGCTATTTGGAAGCACCCGCAGCCAGCCCC...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp TTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTTCTCAGCGTCCCGTGTaGGGAAGGGGGACCACTGTA +
Preference number: 4 (lower is better)
Translates to: FRLHFYLLVKAHSVSRFSSQRPV*GRGTTV
Trigger: TACAGTGGTCCCCCTTCCCCACACGGGACGCTGAGA...ACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCAACCCTGTCGGGATCCTaGAAGGTCCAGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPTLSGS*KVQVVA
Trigger: GGCTACTACCTGGACCTTCCAGGATCCCGACAGGGT...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp GTGGGAGCCATGGCCCAGGCTCTGGTTGTTGTACCATTTGGTCCAATACAAACTACCCGATTTGCCTTGTaGGCTGCTCACAATAGATCG +
Preference number: 4 (lower is better)
Translates to: VGAMAQALVVVPFGPIQTTRFAL*AAHNRS
Trigger: CGATCTATTGTGAGCAGCCCACAAGGCAAATCGGGT...AGTTTGTATTGGACCAAATGGTACAACAACCAGAGCCTGGGCCATGGCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp AGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGTGTTCCCCAAAGTCCTaGGTCCTGTATGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SRQMSTRNTIYTNSSLRVCSPKS*VLYAVS
Trigger: GGAGACGGCATACAGGACCCAGGACTTTGGGGAACA...CACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
3UTR CAA 72 bp CCAGCCAGCTCCTCCTTGACCTCTGAATATGTGTCATaGATGATGGCCAGGAACATGTTCAGGAGCACGAAG +
Preference number: 4 (lower is better)
Translates to: PASSSLTSEYVS*MMARNMFRSTK
Trigger: CTTCGTGCTCCTGAACATGTTCCTGGCCATCATCAATGACACATATTCAGAGGTCAAGGAGGAGCTGGCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp TACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAGCTGTCCCTCAGGGTGGTCTTaGTATAAAGTTCCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: YQQLPQGGLDIKFPVLSCPSGWS*YKVPGS
Trigger: AGAACCGGGAACTTTATATCAAGACCACCCTGAGGG...ACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
CDS-3UTR TCA 90 bp CAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGCCCTCAGGGTGGTCTTaGTATAAAGTTCCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: QMSTRNTIYTNSSLRVVLPSGWS*YKVPGS
Trigger: AGAACCGGGAACTTTATATCAAGACCACCCTGAGGG...CAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
CDS-3UTR TCA 90 bp TTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTAGTCCGCCATGCTGCTaGTGGCCTGAAAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: FRLHFYLLVKAHSVSRFSSPPCC*WPERRL
Trigger: GAGTCTCCTTTCAGGCCATCAGCAGCATGGCGGACT...ACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAGCTGTTGTTCTCATAGTAGATaGAGGAGTGGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: YQQLPQGGLDIKFPVLSCCSHSR*RSGSHG
Trigger: GCCATGGCTCCCACTCCTTCATCTACTATGAGAACA...ACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAACTCCGCTGTAGCTTGTaGGCCTGCCCCAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEELRCSL*ACPSGR
Trigger: TCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGAG...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCATGTTCCAGATGCTGCTaGGGTAGCGAAGCCGGTGAA +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPCSRCC*GSEAGE
Trigger: TTCACCGGCTTCGCTACCTCAGCAGCATCTGGAACA...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp GTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGTCTCAATCTCAGTGTTaGGGGCCACCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VSRQMSTRNTIYTNSSLRSQSQC*GPPSLP
Trigger: AGGAAGAGAGGGTGGCCCTCAACACTGAGATTGAGA...CCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp TCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTGTTCATTTCCTTGCCTaGTTCCCTTCAGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: SRFSGPGGSLLQKILHRLVHFLA*FPSGSI
Trigger: AATGGAGCCTGAAGGGAATCAGGCAAGGAAATGAAC...AAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR TCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGTATAGGGAACCTCTCTaGTGCCTTGACAGATATGGA +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPYREPL*CLDRYG
Trigger: TCCATATCTGTCAAGGCATCAGAGAGGTTCCCTATA...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465680.2
CDS-3UTR TCA 90 bp AGCATTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGATGCCTCTGATGCCTTaGCAGATATGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SIFSFEPTASIWDTTPSRMPLMP*QIWRQQ
Trigger: CTGCTGCCTCCATATCTGTCAAGGCATCAGAGGCAT...CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp GTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGAAATGGAAAGGCGTCTaGGAGCAGCTGTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: VDRCPPGTQYIPTAPSGWKWKGV*EQLFPH
Trigger: GTGTGGAAACAGCTGCTCTCAGACGCCTTTCCATTT...CCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR GCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCAAGCTTTTGCAGCTCCTaGCCCTCAGGACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPSFCSS*PSGLPT
Trigger: TGTGGGAAGTCCTGAGGGGCAGGAGCTGCAAAAGCT...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp CATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCCCACACAGGAGTCATTaGGGACCTTTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: HRSVDRCPPGTQYIPTAPPHRSH*GPLAAA
Trigger: TGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGG...GGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp CTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGCATACGTGTTTGGCTaGTGCAGGAGCTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: LHFYLLVKAHSVSRFSGPAYVFG*CRSFPM
Trigger: CATGGGGAAGCTCCTGCAGCAGCCAAACACGTATGC...TGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCACAGGAGGCAGCCTCTTaGAGAAGATCCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: FISWLKPTQFPGSVDQEAQEAAS*RRSFID
Trigger: GTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTG...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR GCA 90 bp AATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCGTCCTGGGTCCTGTATaGCGTCTCCTGGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: NIYQQLPQGGLDIKFPVLVLGPV*RLLGFI
Trigger: GATGAACCCCAGGAGACGGCATACAGGACCCAGGAC...GAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CCA 90 bp CAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCTCTCAGCGTCCCGTGTaGGGAAGGGGGACCACTGTA +
Preference number: 4 (lower is better)
Translates to: QEHNIYQQLPQGGLDIKFSQRPV*GRGTTV
Trigger: TACAGTGGTCCCCCTTCCCCACACGGGACGCTGAGA...GAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CCA 90 bp TTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAGCCCCGTGCTGGAGATaGTGCAGACTCTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LSFHRSVDRCPPGTQYIPAPCWR*CRLSAS
Trigger: GGACGCTGAGAGTCTGCACCATCTCCAGCACGGGGC...TGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CCA 90 bp TCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACATCAGGCTTCTTGGGTTaGGGCTGGAGAGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SFHRSVDRCPPGTQYIPTSGFLG*GWRGPV
Trigger: CACGGGGCCTCTCCAGCCCCAACCCAAGAAGCCTGA...TGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CCA 90 bp CTGATTCCCTTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCTATGGAGGCAGCAGCTaGACACCTGGGTCCTGTATG +
Preference number: 4 (lower is better)
Translates to: LIPFRLHFYLLVKAHSVSYGGSS*TPGSCM
Trigger: CATACAGGACCCAGGTGTCCAGCTGCTGCCTCCATA...GGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAAGGGAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGATATGGAGGCAGCAGCTaGACACCTGGGTCCTGTATG +
Preference number: 4 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGYGGSS*TPGSCM
Trigger: CATACAGGACCCAGGTGTCCAGCTGCTGCCTCCATA...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp GAGTTGTTCTTCTTTGTCTGGAGAGTAGACATCATAGCAGCTCAGAATGTCCTCAAGGAGTGGGAGCCATaGCCCAGGCTCTGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ELFFFVWRVDIIAAQNVLKEWEP*PRLWLL
Trigger: CAACAACCAGAGCCTGGGCCATGGCTCCCACTCCTT...GAGGACATTCTGAGCTGCTATGATGTCTACTCTCCAGACAAAGAAGAACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp TACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAGCTGTAGGGTTCGGAATATGTaGAAGCCCACAGCCACAATG +
Preference number: 4 (lower is better)
Translates to: YQQLPQGGLDIKFPVLSCRVRNM*KPTATM
Trigger: CATTGTGGCTGTGGGCTTCCACATATTCCGAACCCT...ACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCACCTACAGCATCAATCTaGGACACTACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FISWLKPTQFPGSVDQEAPTASI*DTTPSR
Trigger: CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGG...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp GTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGTGTTTCCACACAGCCTaGGCTCCTGCCTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VSRQMSTRNTIYTNSSLRCFHTA*APAFCR
Trigger: CCTACAAAAGGCAGGAGCCCAGGCTGTGTGGAAACA...CCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
3UTR CAA 72 bp ATGAAGGAGTGGGAGCCATGGCCCAGGCTCTGGTTGTaGTACCATTTGGTCCAATACAAACTGTCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: MKEWEPWPRLWL*YHLVQYKLSSS
Trigger: ACTACTGGACAGTTTGTATTGGACCAAATGGTACAACAACCAGAGCCTGGGCCATGGCTCCCACTCCTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 72 bp ATTTCATGCTCTGCGTGTCCCAGTTCCCTTAAGGTGTaGGTGAAATCCTCAAACTGGATCTCCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISCSACPSSLKV*VKSSNWISCSP
Trigger: TGGGGAGCAGGAGATCCAGTTTGAGGATTTCACCAACACCTTAAGGGAACTGGGACACGCAGAGCATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGATGCTGCTGATGGCCTaGAAGGAGACTCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEMLLMA*KETPVS
Trigger: AGACACTGGAGTCTCCTTTCAGGCCATCAGCAGCAT...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp GGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACTGTTCTCATAGTAGATaGAGGAGTGGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GSIFISWLKPTQFPGSVDCSHSR*RSGSHG
Trigger: GCCATGGCTCCCACTCCTTCATCTACTATGAGAACA...GTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTAGACTGAGAAGTCGATaGACACCACTCGAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: FRLHFYLLVKAHSVSRFSRLRSR*TPLECP
Trigger: GGGGCACTCGAGTGGTGTTCATCGACTTCTCAGTCT...ACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCAGGATTATCCGGAACTaGGTGAAAATGCACTTGATG +
Preference number: 4 (lower is better)
Translates to: YLLVKAHSVSRFSGPGGSRIIRN*VKMHLM
Trigger: CATCAAGTGCATTTTCACTCAGTTCCGGATAATCCT...GCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp CTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCACGAAGAAGACATAGGTaGCAAAGTAGGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHFYLLVKAHSVSRFSGPRRRHR*QSRQGP
Trigger: TGGGCCCTGCCTACTTTGTCACCTATGTCTTCTTCG...TGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp GACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGAACTCTCCTTGTGAGCATGCTCCTCCTTGACCTCTaGATATGTGTCATTGATGAT +
Preference number: 4 (lower is better)
Translates to: DTTPSRTVSSCRTLLVSMLLLDL*ICVIDD
Trigger: ATCATCAATGACACATATTCAGAGGTCAAGGAGGAG...CATGCTCACAAGGAGAGTTCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGATCTCAATCTCAGTGTTaGGGGCCACCCTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGSQSQC*GPPSLP
Trigger: AGGAAGAGAGGGTGGCCCTCAACACTGAGATTGAGA...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAACCTCTCTGATGCCTTaGCAGATATGGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGTSLMP*QIWRQQ
Trigger: CTGCTGCCTCCATATCTGTCAAGGCATCAGAGAGGT...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465680.2
CDS-3UTR TCA 90 bp TTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGTGGGAGAGATGCCTCTaGTGCCTTGACAGATATGGA +
Preference number: 4 (lower is better)
Translates to: FSALSLQHQSGTLLLPGQWERCL*CLDRYG
Trigger: TCCATATCTGTCAAGGCATCAGAGGCATCTCTCCCA...CTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAACCGTGCTGGAGATGGTaGAGACTCTCAGCGTCCCGT +
Preference number: 4 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMEPCWRW*RLSASR
Trigger: ACGGGACGCTGAGAGTCTGCACCATCTCCAGCACGG...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TCAGACGCAGTCTTAGTAGGGTCTTGTTGTAGCCCTGTTTCAGGAGGTCAGAAATCCCGGAAGTCTTCATaGACCACACAGGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: SDAVLVGSCCSPVSGGQKSRKSS*TTQESL
Trigger: CAATGACTCCTGTGTGGTGCATGAAGACTTCCGGGA...TTTCTGACCTCCTGAAACAGGGCTACAACAAGACCCTACTAAGACTGCGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp GGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACATCCTTCATAGACTTTaGTCCGGGAGTGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GSIFISWLKPTQFPGSVDILHRL*SGSASH
Trigger: GTGTGAGGCACTCCCGGAGCAAAGTCTATGAAGGAT...GTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp CTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCACCATGGCCCAGGCTCTaGTTGTTGTACCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: LHFYLLVKAHSVSRFSGPPWPRL*LLYHLV
Trigger: GACCAAATGGTACAACAACCAGAGCCTGGGCCATGG...TGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCAAACTCATCCTGCGAGTaGTATGTCCACGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPNSSCE*YVHAVP
Trigger: TGGCACAGCGTGGACATACCACTCGCAGGATGAGTT...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAAGGTCACAGCTGGGGCTaGCTGCGGGTGCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEEGHSWG*LRVLPN
Trigger: ATTTGGAAGCACCCGCAGCCAGCCCCAGCTGTGACC...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGACTCCTCTGCAACGTTaGAATCTCACCACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IFISWLKPTQFPGSVDQETPLQR*NLTTGE
Trigger: CTCTCCCGTGGTGAGATTCCAACGTTGCAGAGGAGT...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
3UTR CAA 72 bp ATCCAGGCGAAGAAGAGGTTGACAGCATTCATGTTGTaGTACTGTGTCTGCCAGAAGGCGAGGAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: IQAKKRLTAFML*YCVCQKARNSK
Trigger: CTTTGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAACATGAATGCTGTCAACCTCTTCTTCGCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
3UTR CAA 72 bp TTGATCCAGGCGAAGAAGAGGTTGACAGCATTCATGTaGTTGTACTGTGTCTGCCAGAAGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LIQAKKRLTAFM*LYCVCQKARNS
Trigger: TGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAACATGAATGCTGTCAACCTCTTCTTCGCCTGGATCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CTGATTCCCTTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCCCCTCAGGGTGGTCTTaGTATAAAGTTCCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LIPFRLHFYLLVKAHSVSPSGWS*YKVPGS
Trigger: AGAACCGGGAACTTTATATCAAGACCACCCTGAGGG...GGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAAGGGAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGACACAGAAAAGATTaGTATTGGCATTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPGHRKD*YWHCRL
Trigger: CAGTCTACAATGCCAATATCAATCTTTTCTGTGTCC...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp CCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGAGGACACAGAAAAGATTaGTATTGGCATTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: PTASIWDTTPSRTVSSCRGHRKD*YWHCRL
Trigger: CAGTCTACAATGCCAATATCAATCTTTTCTGTGTCC...TCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp CAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCTCTGGACCCGATTTaGCTTGTGGGCTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: QEHNIYQQLPQGGLDIKFPLDPI*LVGCSQ
Trigger: TTGTGAGCAGCCCACAAGGCAAATCGGGTCCAGAGG...GAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCAACTTTGCTCCGGGAGTaGCTCACACTTAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPTLLRE*LTLNSS
Trigger: AGAGGAGTTAAGTGTGAGGCACTCCCGGAGCAAAGT...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp AATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCCTGTATGCCGTCTCCTaGGGTTCATCTTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: NIYQQLPQGGLDIKFPVLLYAVS*GSSSGF
Trigger: GAAGCCTGAAGATGAACCCCAGGAGACGGCATACAG...GAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CCA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAAGCGTGGAGGAGAGCTaGGTCATGGTTTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGSVEES*VMVLLK
Trigger: CTTCAACAAAACCATGACCCAGCTCTCCTCCACGCT...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAACCCGATTTGCCTTGTaGGCTGCTCACAATAGATCG +
Preference number: 4 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGTRFAL*AAHNRS
Trigger: CGATCTATTGTGAGCAGCCCACAAGGCAAATCGGGT...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAACATAGCGGATCAGCTTaGCTGTGCGGATTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEEHSGSA*LCGFAR
Trigger: CCTGGCAAATCCGCACAGTCAAGCTGATCCGCTATG...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAACCACACAGGAGTCATTaGGGACCTTTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMEPHRSH*GPLAAA
Trigger: TGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGG...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCATTGTTGTACTGTGTCTaGCAGAAGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPLLYCV*QKARNS
Trigger: TGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAA...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAACCTCTGGACCCGATTTaGCTTGTGGGCTGCTCACAA +
Preference number: 4 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMEPLDPI*LVGCSQ
Trigger: TTGTGAGCAGCCCACAAGGCAAATCGGGTCCAGAGG...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTACTTTGCTCCGGGAGTaGCTCACACTTAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: FRLHFYLLVKAHSVSRFSTLLRE*LTLNSS
Trigger: AGAGGAGTTAAGTGTGAGGCACTCCCGGAGCAAAGT...ACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR GCA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGACTGAGTTCATTTCCTTaGCTGATTCCCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGLSSFP*LIPFRL
Trigger: GAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAG...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp GTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGGCTCAGACATCACTTTaGTGTAGTAATAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: VDRCPPGTQYIPTAPSGWAQTSL*CSNKHW
Trigger: CCAGTGCTTATTACTACACCAAAGTGATGTCTGAGC...CCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
CDS-3UTR TCA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAATTGGCATTGTAGACTaGGAAGTCGATGAACACCAC +
Preference number: 4 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGIGIVD*EVDEHH
Trigger: GTGGTGTTCATCGACTTCTCAGTCTACAATGCCAAT...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGCCCTTAAGGTGTTGGTaGAATCCTCAAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEPLRCW*NPQTGS
Trigger: AGATCCAGTTTGAGGATTTCACCAACACCTTAAGGG...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAATTGACTGTGCGGATTTaGCAGGATGGGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMELTVRI*QDGMAP
Trigger: AGGTGCCATCCCATCCTGGCAAATCCGCACAGTCAA...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp TTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGAGGAACTCAAAGTCTaGATACGTGTTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FRLHFYLLVKAHSVSRFSEELKV*IRVWLL
Trigger: CAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTC...ACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR GCA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAAAGGACAGTCTCCAGCTaGAGAACTCTCCTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEERTVSS*RTLLVS
Trigger: GCTCACAAGGAGAGTTCTGCAGCTGGAGACTGTCCT...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp AGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTGTAGTAATAAGCACTaGAGCTTGTCATTCCATAGG +
Preference number: 4 (lower is better)
Translates to: RQMSTRNTIYTNSSLRVVCSNKH*SLSFHR
Trigger: CCTATGGAATGACAAGCTCCAGTGCTTATTACTACA...GACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
CDS-3UTR CCA 90 bp GGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACGCTCAGACATCACTTTaGTGTAGTAATAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: GSIFISWLKPTQFPGSVDAQTSL*CSNKHW
Trigger: CCAGTGCTTATTACTACACCAAAGTGATGTCTGAGC...GTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp ATTTGGTCCAATACAAACTGTCCAGTAGTGGGCCCTGGGCAAAATCCCAGAAGTGCTCAGACATCACTTTaGTGTAGTAATAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: IWSNTNCPVVGPGQNPRSAQTSL*CSNKHW
Trigger: CCAGTGCTTATTACTACACCAAAGTGATGTCTGAGC...ACTTCTGGGATTTTGCCCAGGGCCCACTACTGGACAGTTTGTATTGGACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp CAGTGTCTGATGGAGTATGTAAGAAGAGCTCAGACATCACTTTGGTGTAGTAATCCATGGCCCAGGCTCTaGTTGTTGTACCATTTGGTC +
Preference number: 4 (lower is better)
Translates to: QCLMEYVRRAQTSLWCSNPWPRL*LLYHLV
Trigger: GACCAAATGGTACAACAACCAGAGCCTGGGCCATGG...ATTACTACACCAAAGTGATGTCTGAGCTCTTCTTACATACTCCATCAGACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp GTGGGAGCCATGGCCCAGGCTCTGGTTGTTGTACCATTTGGTCCAATACAAACTTTGTTCTTCTTTGTCTaGAGAGTAGACATCATAGCA +
Preference number: 4 (lower is better)
Translates to: VGAMAQALVVVPFGPIQTLFFFV*RVDIIA
Trigger: TGCTATGATGTCTACTCTCCAGACAAAGAAGAACAA...AGTTTGTATTGGACCAAATGGTACAACAACCAGAGCCTGGGCCATGGCTCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp CAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCGAGGAACTCAAAGTCTaGATACGTGTTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QEHNIYQQLPQGGLDIKFEELKV*IRVWLL
Trigger: CAGCAGCCAAACACGTATGCAGACTTTGAGTTCCTC...GAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp TTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGTGTAGTAATAAGCACTaGAGCTTGTCATTCCATAGG +
Preference number: 4 (lower is better)
Translates to: FSALSLQHQSGTLLLPGQCSNKH*SLSFHR
Trigger: CCTATGGAATGACAAGCTCCAGTGCTTATTACTACA...CTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCATTGTTCTTCTTTGTCTaGAGAGTAGACATCATAGCA +
Preference number: 4 (lower is better)
Translates to: FISWLKPTQFPGSVDQEALFFFV*RVDIIA
Trigger: TGCTATGATGTCTACTCTCCAGACAAAGAAGAACAA...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp TCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACACCTACAGCATCAATCTaGGACACTACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SFHRSVDRCPPGTQYIPTPTASI*DTTPSR
Trigger: CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGG...TGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp GGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACACCCACATGGTCTTATaGAAGAATAATGTCAGAACC +
Preference number: 4 (lower is better)
Translates to: GSIFISWLKPTQFPGSVDTHMVL*KNNVRT
Trigger: GGTTCTGACATTATTCTTCCATAAGACCATGTGGGT...GTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR TCA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAATTCCCCAAAGTCCTCTaGTGCCTTGACAGATATGGA +
Preference number: 4 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEEFPKVL*CLDRYG
Trigger: TCCATATCTGTCAAGGCATCAGAGGACTTTGGGGAA...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp GGAGTTGTTCTTCTTTGTCTGGAGAGTAGACATCATAGCAGCTCAGAATGTCCTAGGATTATCCGGAACTaGGTGAAAATGCACTTGATG +
Preference number: 4 (lower is better)
Translates to: GVVLLCLESRHHSSSECPRIIRN*VKMHLM
Trigger: CATCAAGTGCATTTTCACTCAGTTCCGGATAATCCT...AGGACATTCTGAGCTGCTATGATGTCTACTCTCCAGACAAAGAAGAACAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR GCA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAACTGAGTTCATTTCCTTaGCTGATTCCCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEELSSFP*LIPFRL
Trigger: GAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAG...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CTGATTCCCTTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCTGTAGTAATAAGCACTaGAGCTTGTCATTCCATAGG +
Preference number: 4 (lower is better)
Translates to: LIPFRLHFYLLVKAHSVSCSNKH*SLSFHR
Trigger: CCTATGGAATGACAAGCTCCAGTGCTTATTACTACA...GGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAAGGGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCAGGTTGTTGTACCATTTaGTCCAATACAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPGCCTI*SNTNCP
Trigger: TGGACAGTTTGTATTGGACCAAATGGTACAACAACC...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
3UTR CAA 72 bp ATGTACTTGAATATCTTGATCCAGGCGAAGAAGAGGTaGACAGCATTCATGTTGTTGTACTGTGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MYLNILIQAKKR*TAFMLLYCVCQ
Trigger: CTGGCAGACACAGTACAACAACATGAATGCTGTCAACCTCTTCTTCGCCTGGATCAAGATATTCAAGTACAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAACAGCATTTTCAGCTTTaGGCCTACAGCATCAATCTG +
Preference number: 4 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEEQHFQL*AYSINL
Trigger: CAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCTG...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR TCA 90 bp TTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCACAGCATTTTCAGCTTTaGGCCTACAGCATCAATCTG +
Preference number: 4 (lower is better)
Translates to: LSFHRSVDRCPPGTQYIPQHFQL*AYSINL
Trigger: CAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCTG...TGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CCA 90 bp CACCACATATTAATTCAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATAGGGTTCGGAATATGTaGAAGCCCACAGCCACAATG +
Preference number: 4 (lower is better)
Translates to: HHILIQRSLNPEFISLPDRVRNM*KPTATM
Trigger: CATTGTGGCTGTGGGCTTCCACATATTCCGAACCCT...ATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTGAATTAATATGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CCA 90 bp TTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAGGTTGTTGTACCATTTaGTCCAATACAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSFHRSVDRCPPGTQYIPGCCTI*SNTNCP
Trigger: TGGACAGTTTGTATTGGACCAAATGGTACAACAACC...TGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR TCA 90 bp CACCACATATTAATTCAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATCTCCTCCTTGACCTCTaGATATGTGTCATTGATGAT +
Preference number: 4 (lower is better)
Translates to: HHILIQRSLNPEFISLPDLLLDL*ICVIDD
Trigger: ATCATCAATGACACATATTCAGAGGTCAAGGAGGAG...ATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTGAATTAATATGTGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
3UTR CAA 72 bp TTAATTCAAAGATCTCTGAATCCTGAGTTCATTTCCTaGCCTGATTCCCTTCAGGCTCCATTTTTATCTCCT +
Preference number: 4 (lower is better)
Translates to: LIQRSLNPEFIS*PDSLQAPFLSP
Trigger: AGGAGATAAAAATGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTGAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CCA 90 bp CACCACATATTAATTCAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATACCCACATGGTCTTATaGAAGAATAATGTCAGAACC +
Preference number: 4 (lower is better)
Translates to: HHILIQRSLNPEFISLPDTHMVL*KNNVRT
Trigger: GGTTCTGACATTATTCTTCCATAAGACCATGTGGGT...ATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTGAATTAATATGTGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp CAGCCCCTCCTGAAGGGCCCGGAGAGCCTCTGCACTACCCTGTCGGGATCCTGGAAGCAGGTAGCCGAGTaGGGCATAGGCGAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: QPLLKGPESLCTTLSGSWKQVAE*GIGEEN
Trigger: GTTTTCTTCGCCTATGCCCAACTCGGCTACCTGCTT...CCAGGATCCCGACAGGGTAGTGCAGAGGCTCTCCGGGCCCTTCAGGAGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS CCA 90 bp GTCCTGTATGCCGTCTCCTGGGGTTCATCTTCAGGCTTCTTGGGTTaGGGCTGGAGAGGCCCCGTGCTGGAGATGGTGCAGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: VLYAVSWGSSSGFLG*GWRGPVLEMVQTLS
Trigger: GCTGAGAGTCTGCACCATCTCCAGCACGGGGCCTCTCCAGCCCCAACCCAAGAAGCCTGAAGATGAACCCCAGGAGACGGCATACAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000532547.1
CDS-3UTR CAA 90 bp GTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGTTCGGAAGTCCACGCTGTGCCATaGAAGGGCCCAAAGGGGAGT +
Preference number: 5 (lower is better)
Translates to: VWLLQELPHEPIHLEGSEVHAVP*KGPKGS
Trigger: ACTCCCCTTTGGGCCCTTCAATGGCACAGCGTGGAC...TTCCGAACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp AGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATTTCAGGCTTCTTGGGTaGGGGCTGGAGAGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: SPLSFQVQWTRRQPLAEDFRLLG*GLERPR
Trigger: ACGGGGCCTCTCCAGCCCCAACCCAAGAAGCCTGAA...ATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CTGAAACCCAGCCTCCTGCTCTGGCAGCCTCTGGACCCGATTTGCCTTGTGGGCCAGGAGGTCAGAAAGTaGCAGCTCATCCTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: LKPSLLLWQPLDPICLVGQEVRK*QLILLS
Trigger: GGACAGAAGGATGAGCTGCAACTTTCTGACCTCCTG...GCCCACAAGGCAAATCGGGTCCAGAGGCTGCCAGAGCAGGAGGCTGGGTTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CAGGTAGTAGCCACCTCCGCTGTAGCTTGTGAGCCTGCCCCAGTGGGAGAAGCCTTCTCAATCTCAGTGTaGAGGGCCACCCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QVVATSAVACEPAPVGEAFSISV*RATLSS
Trigger: GGAAGAGAGGGTGGCCCTCAACACTGAGATTGAGAA...GGCTTCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGAGGTGGCTACTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp GGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGCCTCAGCCTCTGGACCCGATTaGCCTTGTGGGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: GGSLLQKILHRLCSGSASASGPD*PCGLLT
Trigger: TGTGAGCAGCCCACAAGGCAAATCGGGTCCAGAGGC...TGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CTGCTCCCCACCCTGCAGGACCTTCTGCACATCCGAAACCCTCTCCTTCCTCAGGTGCTTCCAAATAGCTaGTTCCTTCACGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LLPTLQDLLHIRNPLLPQVLPNS*FLHAWG
Trigger: TCCCCAGGCGTGAAGGAACAAGCTATTTGGAAGCAC...CTGAGGAAGGAGAGGGTTTCGGATGTGCAGAAGGTCCTGCAGGGTGGGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TCTTCATGCACCACACAGGAGTCATTGCGGACCTTTAGCTGCCGCAGCCTCGGAAGTCTGCATACGTGTTaGGCTGCTGCAGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SSCTTQESLRTFSCRSLGSLHTC*AAAGAS
Trigger: GGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACT...TCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CAGGTAGTAGCCACCTCCGCTGTAGCTTGTGAGCCTGCCCCAGTGGGAGAAGCCAGTTCCCTTAAGGTGTaGGTGAAATCCTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: QVVATSAVACEPAPVGEASSLKV*VKSSNW
Trigger: CCAGTTTGAGGATTTCACCAACACCTTAAGGGAACT...GGCTTCTCCCACTGGGGCAGGCTCACAAGCTACAGCGGAGGTGGCTACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TCTTCATGCACCACACAGGAGTCATTGCGGACCTTTAGCTGCCGCAGCCTCGGATGGACCCGATTTGCCTaGTGGGCTGCTCACAATAGA +
Preference number: 5 (lower is better)
Translates to: SSCTTQESLRTFSCRSLGWTRFA*WAAHNR
Trigger: TCTATTGTGAGCAGCCCACAAGGCAAATCGGGTCCA...TCCGAGGCTGCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGTGCATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS GCA 90 bp AAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTaGAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGCCTCACACT +
Preference number: 5 (lower is better)
Translates to: KPTQFPGSVDQEAAS*RRSFIDFAPGVPHT
Trigger: AGTGTGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp TCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTCATCTTCAGGCTTCTaGGGTTGGGGCTGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: SRFSGPGGSLLQKILHRLSSSGF*GWGWRG
Trigger: GCCTCTCCAGCCCCAACCCAAGAAGCCTGAAGATGA...AAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp GACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGTGGCCCAGGCTCTGGTaGTTGTACCATTTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: DQEAASCRRSFIDFAPGVWPRLW*LYHLVQ
Trigger: TTGGACCAAATGGTACAACAACCAGAGCCTGGGCCA...CACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp GGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGCCTCACAGGAGGTCAGAAAGTaGCAGCTCATCCTTCTGTCC +
Preference number: 5 (lower is better)
Translates to: GGSLLQKILHRLCSGSASQEVRK*QLILLS
Trigger: GGACAGAAGGATGAGCTGCAACTTTCTGACCTCCTG...TGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TACGTGTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGTTTGTTCTCAGTCAGGGTaGTTCCCCAAAGTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: YVFGCCRSFPMSRFTSRVCSQSG*FPKVLR
Trigger: CCTTAGGACTTTGGGGAACAACCCTGACTGAGAACA...AACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAACACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CTGATTCCCTTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCTCCACTCCCCAGCTTTaGCAGCTCCTGCCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LIPFRLHFYLLVKAHSVSSTPQL*QLLPLR
Trigger: CCTGAGGGGCAGGAGCTGCAAAAGCTGGGGAGTGGA...GGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAAGGGAATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAACCACACAGGAGTCATaGCGGACCTTTAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: FISWLKPTQFPGSVDQEATTQES*RTFSCR
Trigger: GCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGT...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp GTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGACCACACAGGAGTCATaGCGGACCTTTAGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: VDRCPPGTQYIPTAPSGWTTQES*RTFSCR
Trigger: GCGGCAGCTAAAGGTCCGCAATGACTCCTGTGTGGT...CCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGGGCCCAGGATGCGGTaGGCATTGTCGATAGCATTG +
Preference number: 5 (lower is better)
Translates to: FISWLKPTQFPGSVDQEAGPRMR*ALSIAL
Trigger: CAATGCTATCGACAATGCCAACCGCATCCTGGGCCC...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp AGCATTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGGCCTCTGGACCCGATTaGCCTTGTGGGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: SIFSFEPTASIWDTTPSRASGPD*PCGLLT
Trigger: TGTGAGCAGCCCACAAGGCAAATCGGGTCCAGAGGC...CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp GGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGGAGTGCCTCACCTGAGTTCATTTCCTaGCCTGATTCCCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: GGSLLQKILHRLCSGSASPEFIS*PDSLQA
Trigger: AGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGG...TGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS GCA 90 bp AGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTaGTCCGGGAGTGCCTCACACTTAACTCCTCTGCAACGTTGGAAT +
Preference number: 5 (lower is better)
Translates to: SGPGGSLLQKILHRL*SGSASHLTPLQRWN
Trigger: ATTCCAACGTTGCAGAGGAGTTAAGTGTGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp AATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCTTCAGGCTTCTTGGGTaGGGGCTGGAGAGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: NIYQQLPQGGLDIKFPVLFRLLG*GLERPR
Trigger: ACGGGGCCTCTCCAGCCCCAACCCAAGAAGCCTGAA...GAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CAA 90 bp GTTTGGCTGCTGCAGGAGCTTCCCCATGAGCCGATTCACCTCGAGGGTTCGGAATGGTTGTTGTACCATTaGGTCCAATACAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: VWLLQELPHEPIHLEGSEWLLYH*VQYKLS
Trigger: GGACAGTTTGTATTGGACCAAATGGTACAACAACCA...TTCCGAACCCTCGAGGTGAATCGGCTCATGGGGAAGCTCCTGCAGCAGCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp GCCCAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATCCCAGGCTCTGGTTGTaGTACCATTTGGTCCAATAC +
Preference number: 5 (lower is better)
Translates to: AQDAVGIVDSIVVKVPEDPRLWL*YHLVQY
Trigger: GTATTGGACCAAATGGTACAACAACCAGAGCCTGGG...ATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp ACTGTGCGGATTTGCCAGGATGGGATGGCACCTCCTGTAGCTGGAAACTCCACCAGCTGGGTCATGGTTTaGTTGAAGCTGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: TVRICQDGMAPPVAGNSTSWVMV*LKLMYL
Trigger: CAAGTACATCAGCTTCAACAAAACCATGACCCAGCT...GGTGGAGTTTCCAGCTACAGGAGGTGCCATCCCATCCTGGCAAATCCGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTAACTCCTCTGCAACGTaGGAATCTCACCACGGGAGA +
Preference number: 5 (lower is better)
Translates to: SRFSGPGGSLLQKILHRLNSSAT*ESHHGR
Trigger: TCTCCCGTGGTGAGATTCCAACGTTGCAGAGGAGTT...AAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp CCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTAACTCCTCTGCAACGTaGGAATCTCACCACGGGAGA +
Preference number: 5 (lower is better)
Translates to: PGSVDQEAASCRRSFIDFNSSAT*ESHHGR
Trigger: TCTCCCGTGGTGAGATTCCAACGTTGCAGAGGAGTT...AAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp GTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTGGCCCAGGCTCTGGTaGTTGTACCATTTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: VDRCPPGTQYIPTAPSGWWPRLW*LYHLVQ
Trigger: TTGGACCAAATGGTACAACAACCAGAGCCTGGGCCA...CCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CTGATTCCCTTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCCTTGACTGTGCGGATTaGCCAGGATGGGATGGCACC +
Preference number: 5 (lower is better)
Translates to: LIPFRLHFYLLVKAHSVSLDCAD*PGWDGT
Trigger: GGTGCCATCCCATCCTGGCAAATCCGCACAGTCAAG...GGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAAGGGAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGGCTAAAGTTTTCCACTaGGGTCCCGAAAAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPAKVFH*GPEKQV
Trigger: TACCTGCTTTTCGGGACCCAAGTGGAAAACTTTAGC...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGCCAGCCAGCTCCTCCTaGACCTCTGAATATGTGTCA +
Preference number: 5 (lower is better)
Translates to: QMSTRNTIYTNSSLRVVLPASSS*TSEYVS
Trigger: TGACACATATTCAGAGGTCAAGGAGGAGCTGGCTGG...CAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCACCAGGAGGCAGCCTCTaGCAGAAGATCCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: FISWLKPTQFPGSVDQEAPGGSL*QKILHR
Trigger: TCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGG...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp CAGTGTCTGATGGAGTATGTAAGAAGAGCTCAGACATCACTTTGGTGTAGTAATTCCACTCCCCAGCTTTaGCAGCTCCTGCCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QCLMEYVRRAQTSLWCSNSTPQL*QLLPLR
Trigger: CCTGAGGGGCAGGAGCTGCAAAAGCTGGGGAGTGGA...ATTACTACACCAAAGTGATGTCTGAGCTCTTCTTACATACTCCATCAGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CAA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCAAGTCTGCATACGTGTTaGGCTGCTGCAGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPSLHTC*AAAGAS
Trigger: GGAAGCTCCTGCAGCAGCCAAACACGTATGCAGACT...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp GCCCAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTTGACAGCATTCATGTaGTTGTACTGTGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AQDAVGIVDSIVVKVPEDLTAFM*LYCVCQ
Trigger: CTGGCAGACACAGTACAACAACATGAATGCTGTCAA...ATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp AGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATATGTACTTGAATATCTaGATCCAGGCGAAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SPLSFQVQWTRRQPLAEDMYLNI*IQAKKR
Trigger: CCTCTTCTTCGCCTGGATCAAGATATTCAAGTACAT...ATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGAGCTGGGTCATGGTTTaGTTGAAGCTGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPSWVMV*LKLMYL
Trigger: CAAGTACATCAGCTTCAACAAAACCATGACCCAGCT...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAGCAGTTCCCTTAAGGTGTaGGTGAAATCCTCAAACTGG +
Preference number: 5 (lower is better)
Translates to: YLLVKAHSVSRFSGPGGSSSLKV*VKSSNW
Trigger: CCAGTTTGAGGATTTCACCAACACCTTAAGGGAACT...GCTGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGGCAAACCTCTCTGATGCCTaGACAGATATGGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: FISWLKPTQFPGSVDQEANLSDA*TDMEAA
Trigger: TGCTGCCTCCATATCTGTCAAGGCATCAGAGAGGTT...TGCCTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465680.2
CDS TCA 90 bp CCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTaGTATAAAGTTCCCGGTTCTCAGCTGTGTTCTCAGTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: PPGTQYIPTAPSGWS*YKVPGSQLCSQSGL
Trigger: CAACCCTGACTGAGAACACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318222.4
ENST00000528248.1
ENST00000532547.1
CDS-3UTR CAA 90 bp GGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACAAGTCCTCTGATGCCTaGACAGATATGGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GSIFISWLKPTQFPGSVDKSSDA*TDMEAA
Trigger: TGCTGCCTCCATATCTGTCAAGGCATCAGAGGACTT...GTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TCAGTGGACCAGGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTGCTCCGAATAAGCACTGGAGCTaGTCATTCCATAGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: SVDQEAASCRRSFIDFAPNKHWS*SFHRSV
Trigger: TACTGACCTATGGAATGACAAGCTCCAGTGCTTATT...CGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCCTGGTCCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGGCCCAAAGGGGAGTaGTTCTTCTTTGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LHFYLLVKAHSVSRFSGPGPKGE*FFFVWR
Trigger: TCTCCAGACAAAGAAGAACAACTCCCCTTTGGGCCC...TGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCTTGACTGTGCGGATTaGCCAGGATGGGATGGCACC +
Preference number: 5 (lower is better)
Translates to: QEHNIYQQLPQGGLDIKFLDCAD*PGWDGT
Trigger: GGTGCCATCCCATCCTGGCAAATCCGCACAGTCAAG...GAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAGCTGTCAGGCGAAGAAGAGGTaGACAGCATTCATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: YQQLPQGGLDIKFPVLSCQAKKR*TAFMLL
Trigger: CAACAACATGAATGCTGTCAACCTCTTCTTCGCCTG...ACAGCTGAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATTCCCTTCAGGCTCCAAAGCAGGTAGCCGAGTaGGGCATAGGCGAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: QRSLNPEFISLPDSLQAPKQVAE*GIGEEN
Trigger: GTTTTCTTCGCCTATGCCCAACTCGGCTACCTGCTT...TGGAGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp AGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCTCAGGGTGGTCGCTAAAGTTTTCCACTaGGGTCCCGAAAAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: RQMSTRNTIYTNSSLRVVAKVFH*GPEKQV
Trigger: TACCTGCTTTTCGGGACCCAAGTGGAAAACTTTAGC...GACCACCCTGAGGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CCTACAGCATCAATCTGGGACACTACTCCTTCCAGGACAGTCTCCAGCTGCAGATCTGAATATGTGTCATaGATGATGGCCAGGAACATG +
Preference number: 5 (lower is better)
Translates to: PTASIWDTTPSRTVSSCRSEYVS*MMARNM
Trigger: CATGTTCCTGGCCATCATCAATGACACATATTCAGA...TCTGCAGCTGGAGACTGTCCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CTGATTCCCTTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCGTGCTTCCAAATAGCTaGTTCCTTCACGCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: LIPFRLHFYLLVKAHSVSVLPNS*FLHAWG
Trigger: TCCCCAGGCGTGAAGGAACAAGCTATTTGGAAGCAC...GGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAAGGGAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGCCCAGGCTCTGGTTGTaGTACCATTTGGTCCAATAC +
Preference number: 5 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEPRLWL*YHLVQY
Trigger: GTATTGGACCAAATGGTACAACAACCAGAGCCTGGG...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CACAATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTGGGCCCAAAGGGGAGTaGTTCTTCTTTGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: HNIYQQLPQGGLDIKFPVGPKGE*FFFVWR
Trigger: TCTCCAGACAAAGAAGAACAACTCCCCTTTGGGCCC...AACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAGGGCCCAGGATGCGGTaGGCATTGTCGATAGCATTG +
Preference number: 5 (lower is better)
Translates to: LSFHRSVDRCPPGTQYIPGPRMR*ALSIAL
Trigger: CAATGCTATCGACAATGCCAACCGCATCCTGGGCCC...TGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp ATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAGCCTGAGTTCATTTCCTaGCCTGATTCCCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: IFISWLKPTQFPGSVDQEPEFIS*PDSLQA
Trigger: AGCCTGAAGGGAATCAGGCAAGGAAATGAACTCAGG...CTCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS-3UTR CAA 90 bp GAGTTGTTCTTCTTTGTCTGGAGAGTAGACATCATAGCAGCTCAGAATGTCCTCGATGCCTCTGATGCCTaGACAGATATGGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: ELFFFVWRVDIIAAQNVLDASDA*TDMEAA
Trigger: TGCTGCCTCCATATCTGTCAAGGCATCAGAGGCATC...GAGGACATTCTGAGCTGCTATGATGTCTACTCTCCAGACAAAGAAGAACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CACCACATATTAATTCAAAGATCTCTGAATCCTGAGTTCATTTCCTTGCCTGATGTCCACGCTGTGCCATaGAAGGGCCCAAAGGGGAGT +
Preference number: 5 (lower is better)
Translates to: HHILIQRSLNPEFISLPDVHAVP*KGPKGS
Trigger: ACTCCCCTTTGGGCCCTTCAATGGCACAGCGTGGAC...ATCAGGCAAGGAAATGAACTCAGGATTCAGAGATCTTTGAATTAATATGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TCAGACGCAGTCTTAGTAGGGTCTTGTTGTAGCCCTGTTTCAGGAGGTCAGAAAAATAAGCACTGGAGCTaGTCATTCCATAGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: SDAVLVGSCCSPVSGGQKNKHWS*SFHRSV
Trigger: TACTGACCTATGGAATGACAAGCTCCAGTGCTTATT...TTTCTGACCTCCTGAAACAGGGCTACAACAAGACCCTACTAAGACTGCGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGAACAGCATTCATGTTGTaGTACTGTGTCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGTAFML*YCVCQK
Trigger: CTTCTGGCAGACACAGTACAACAACATGAATGCTGT...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAACAGCTCCCACAGCATTCATGTTGTaGTACTGTGTCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: HRSVDRCPPGTQYIPTAPTAFML*YCVCQK
Trigger: CTTCTGGCAGACACAGTACAACAACATGAATGCTGT...GGGAGCTGTTGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp AGCATTTTCAGCTTTGAGCCTACAGCATCAATCTGGGACACTACTCCTTCCAGGATGTACTTGAATATCTaGATCCAGGCGAAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SIFSFEPTASIWDTTPSRMYLNI*IQAKKR
Trigger: CCTCTTCTTCGCCTGGATCAAGATATTCAAGTACAT...CCTGGAAGGAGTAGTGTCCCAGATTGATGCTGTAGGCTCAAAGCTGAAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CAGGATGCGGTTGGCATTGTCGATAGCATTGTAGTCAAAGTCCCCGAGGATTATTTGAAGCTGATGTACTaGAATATCTTGATCCAGGCG +
Preference number: 5 (lower is better)
Translates to: QDAVGIVDSIVVKVPEDYLKLMY*NILIQA
Trigger: CGCCTGGATCAAGATATTCAAGTACATCAGCTTCAA...ATAATCCTCGGGGACTTTGACTACAATGCTATCGACAATGCCAACCGCATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAACCAGCCAGCTCCTCCTaGACCTCTGAATATGTGTCA +
Preference number: 5 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEEPASSS*TSEYVS
Trigger: TGACACATATTCAGAGGTCAAGGAGGAGCTGGCTGG...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAATTCTCAATCTCAGTGTaGAGGGCCACCCTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMEFSISV*RATLSS
Trigger: GGAAGAGAGGGTGGCCCTCAACACTGAGATTGAGAA...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAATGGACCCGATTTGCCTaGTGGGCTGCTCACAATAGA +
Preference number: 5 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEEWTRFA*WAAHNR
Trigger: TCTATTGTGAGCAGCCCACAAGGCAAATCGGGTCCA...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCAAACTCCTCTGCAACGTaGGAATCTCACCACGGGAGA +
Preference number: 5 (lower is better)
Translates to: LSFHRSVDRCPPGTQYIPNSSAT*ESHHGR
Trigger: TCTCCCGTGGTGAGATTCCAACGTTGCAGAGGAGTT...TGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp TTGTCATTCCATAGGTCAGTAGACAGATGTCCACCAGGAACACAATATATACCATGTTCTCAGTCAGGGTaGTTCCCCAAAGTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LSFHRSVDRCPPGTQYIPCSQSG*FPKVLG
Trigger: ACCCAGGACTTTGGGGAACAACCCTGACTGAGAACA...TGGTATATATTGTGTTCCTGGTGGACATCTGTCTACTGACCTATGGAATGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS-3UTR CAA 90 bp CATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTGGACCAGGATTGAAGCTGATGTACTaGAATATCTTGATCCAGGCG +
Preference number: 5 (lower is better)
Translates to: HFYLLVKAHSVSRFSGPGLKLMY*NILIQA
Trigger: CGCCTGGATCAAGATATTCAAGTACATCAGCTTCAA...TCCTGGTCCACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TTCAGGCTCCATTTTTATCTCCTGGTTAAAGCCCACTCAGTTTCCAGGTTCAGTCCAGCATTTTCAGCTTaGAGCCTACAGCATCAATCT +
Preference number: 5 (lower is better)
Translates to: FRLHFYLLVKAHSVSRFSPAFSA*SLQHQS
Trigger: AGATTGATGCTGTAGGCTCAAAGCTGAAAATGCTGG...ACTGAACCTGGAAACTGAGTGGGCTTTAACCAGGAGATAAAAATGGAGCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp AATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCCCAGCATTTTCAGCTTaGAGCCTACAGCATCAATCT +
Preference number: 5 (lower is better)
Translates to: NIYQQLPQGGLDIKFPVLPAFSA*SLQHQS
Trigger: AGATTGATGCTGTAGGCTCAAAGCTGAAAATGCTGG...GAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528248.1
CDS-3UTR CAA 90 bp AATATATACCAACAGCTCCCTCAGGGTGGTCTTGATATAAAGTTCCCGGTTCTCAATAAGCACTGGAGCTaGTCATTCCATAGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: NIYQQLPQGGLDIKFPVLNKHWS*SFHRSV
Trigger: TACTGACCTATGGAATGACAAGCTCCAGTGCTTATT...GAGAACCGGGAACTTTATATCAAGACCACCCTGAGGGAGCTGTTGGTATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528248.1
ENST00000532547.1
CDS-3UTR CAA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAACAGGCGAAGAAGAGGTaGACAGCATTCATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEEQAKKR*TAFMLL
Trigger: CAACAACATGAATGCTGTCAACCTCTTCTTCGCCTG...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAATTGACAGCATTCATGTaGTTGTACTGTGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMELTAFM*LYCVCQ
Trigger: CTGGCAGACACAGTACAACAACATGAATGCTGTCAA...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp TTCCTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAATGGTTGTTGTACCATTaGGTCCAATACAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: FLRSFIDSHHGNPHGLMEWLLYH*VQYKLS
Trigger: GGACAGTTTGTATTGGACCAAATGGTACAACAACCA...TTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS-3UTR CAA 90 bp CTAAGGAGTTTTATTGATAGCCACCATGGAAACCCACATGGTCTTATGGAAGAATCTGAATATGTGTCATaGATGATGGCCAGGAACATG +
Preference number: 5 (lower is better)
Translates to: LRSFIDSHHGNPHGLMEESEYVS*MMARNM
Trigger: CATGTTCCTGGCCATCATCAATGACACATATTCAGA...TTCTTCCATAAGACCATGTGGGTTTCCATGGTGGCTATCAATAAAACTCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318222.4
CDS CCA 72 bp CGTGCTGGAGATGGTGCAGACTCTCAGCGTCCCGTGTaGGGAAGGGGGACCACTGTAGGCGGGGTTGTCCCA +
Preference number: 6 (lower is better)
Translates to: RAGDGADSQRPV*GRGTTVGGVVP
Trigger: TGGGACAACCCCGCCTACAGTGGTCCCCCTTCCCCACACGGGACGCTGAGAGTCTGCACCATCTCCAGCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000532547.1
CDS GCA 72 bp CTTCAGGCTTCTTGGGTTGGGGCTGGAGAGGCCCCGTaGTGGAGATGGTGCAGACTCTCAGCGTCCCGTGTG +
Preference number: 6 (lower is better)
Translates to: LQASWVGAGEAP*WRWCRLSASRV
Trigger: CACACGGGACGCTGAGAGTCTGCACCATCTCCAGCACGGGGCCTCTCCAGCCCCAACCCAAGAAGCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000532547.1
CDS CCA 72 bp TGTTCCCCAAAGTCCTGGGTCCTGTATGCCGTCTCCTaGGGTTCATCTTCAGGCTTCTTGGGTTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: CSPKSWVLYAVS*GSSSGFLGWGW
Trigger: CCAGCCCCAACCCAAGAAGCCTGAAGATGAACCCCAGGAGACGGCATACAGGACCCAGGACTTTGGGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS CAA 72 bp CTCCGGGAGTGCCTCACACTTAACTCCTCTGCAACGTaGGAATCTCACCACGGGAGAGTCTCCTCTCCTCTA +
Preference number: 6 (lower is better)
Translates to: LRECLTLNSSAT*ESHHGRVSSPL
Trigger: TAGAGGAGAGGAGACTCTCCCGTGGTGAGATTCCAACGTTGCAGAGGAGTTAAGTGTGAGGCACTCCCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS CAA 72 bp AAAGTTCCCGGTTCTCAGCTGTGTTCTCAGTCAGGGTaGTTCCCCAAAGTCCTGGGTCCTGTATGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: KVPGSQLCSQSG*FPKVLGPVCRL
Trigger: GAGACGGCATACAGGACCCAGGACTTTGGGGAACAACCCTGACTGAGAACACAGCTGAGAACCGGGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532547.1
CDS GCA 72 bp GGAGGCAGCCTCTTGCAGAAGATCCTTCATAGACTTTaGTCCGGGAGTGCCTCACACTTAACTCCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: GGSLLQKILHRL*SGSASHLTPLQ
Trigger: TTGCAGAGGAGTTAAGTGTGAGGCACTCCCGGAGCAAAGTCTATGAAGGATCTTCTGCAAGAGGCTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318222.4
ENST00000465680.2
CDS CAA 72 bp AAAGTTCCCGGTTCTCAGCTGTGTTCTCAGTCAGGGTaGTTCCCCAAAGTCCTAAGGGGCATGGGAGAGATG +
Preference number: 6 (lower is better)
Translates to: KVPGSQLCSQSG*FPKVLRGMGEM
Trigger: CATCTCTCCCATGCCCCTTAGGACTTTGGGGAACAACCCTGACTGAGAACACAGCTGAGAACCGGGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528248.1