RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKD1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158683

Ensembl transcript IDs: ENST00000289672.7, ENST00000433506.1, ENST00000462350.1, ENST00000483616.1, ENST00000648482.1

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAACCATTTGGGAGAAGGCTGGAGTTAGAATCTTGTCCCACATCTaGACTCTCCGAATGGTGATTATGAGTAACAGTCTGATGACAGAT +
Preference number: 1 (lower is better)
Translates to: LTIWEKAGVRILSHI*TLRMVIMSNSLMTD
Trigger: ATCTGTCATCAGACTGTTACTCATAATCACCATTCGGAGAGTTCAGATGTGGGACAAGATTCTAACTCCAGCCTTCTCCCAAATGGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
3UTR-3UTR TCA 90 bp AAATATGCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTGGCAGGTGGATCACCTaGGGTCAGGAGTTCGACACC +
Preference number: 2 (lower is better)
Translates to: KYAQGSKYDHDAIAILLCGRWIT*GQEFDT
Trigger: GGTGTCGAACTCCTGACCTCAGGTGATCCACCTGCC...ACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGCATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
3UTR-3UTR CCA 90 bp AAATATGCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTCCAGGAACCACACTaGATGCCTGAAACTGTGGCT +
Preference number: 2 (lower is better)
Translates to: KYAQGSKYDHDAIAILLCFQEPH*MPETVA
Trigger: AGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAA...ACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
3UTR-3UTR TCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAATGACAGATAAACCTTaGTTTTCATCCTGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: TICNSRATGKLTIWEKAGMTDKP*FSSWFP
Trigger: GGGAAACCAGGATGAAAATCAAGGTTTATCTGTCAT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
3UTR-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGATCTTGTCCCACATCTaGACTCTCCGAATGGTGATT +
Preference number: 2 (lower is better)
Translates to: TNKTICNSRATGKLTIWEILSHI*TLRMVI
Trigger: AATCACCATTCGGAGAGTTCAGATGTGGGACAAGAT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
3UTR-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATCAGCTCTTCTCACCTaGAAAACTAGGATGTCTGCT +
Preference number: 2 (lower is better)
Translates to: VILVSFIAFMRPERNFTRSALLT*KTRMSA
Trigger: AGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTGA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
3UTR-3UTR GCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAAGTAATAAAAGTTATGTaGGGCCGGGTGCAATGGCTC +
Preference number: 2 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQVIKVM*GRVQWL
Trigger: GAGCCATTGCACCCGGCCGCACATAACTTTTATTAC...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
3UTR CCA 72 bp CCCTCACCTGAGCAGCATAACTTCCAGGAACCACACTaGATGCCTGAAACTGTGGCTAGCACCAACCCCCAT +
Preference number: 3 (lower is better)
Translates to: PSPEQHNFQEPH*MPETVASTNPH
Trigger: ATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCTGCTCAGGTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648482.1
3UTR GCA 72 bp CACCTGAGCAGCATAACTTCCAGGAACCACACTGGATaGCTGAAACTGTGGCTAGCACCAACCCCCATACAA +
Preference number: 3 (lower is better)
Translates to: HLSSITSRNHTG*LKLWLAPTPIQ
Trigger: TTGTATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCTGCTCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648482.1
3UTR CCA 72 bp ATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTaGGAGAAGGCTGGAGTTAGAATCTTGTCCCACATC +
Preference number: 3 (lower is better)
Translates to: ICNSRATGKLTI*EKAGVRILSHI
Trigger: GATGTGGGACAAGATTCTAACTCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACCCCGGCACACGGGCTaGCGGGGTGCCTCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAPRHTG*RGASRV
Trigger: TACCCGGGAGGCACCCCGTCAGCCCGTGTGCCGGGG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCCAAGAGCTCCAGGCTaGGCCCCCGGCACACGGGCT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWPRAPG*APGTRA
Trigger: AGCCCGTGTGCCGGGGGCTCAGCCTGGAGCTCTTGG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGGCCCACGGCTGTCGTaGCAGAGGCGGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLGPRLS*QRRIFL
Trigger: GAGGAAGATCCGCCTCTGGCACGACAGCCGTGGGCC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp AGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCAGCTGGGGAAGCATaGGGTGGTACTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SITSRNHTGCLKLWLAPTPAGEA*GGTAGL
Trigger: CAGCCCTGCAGTACCACCTCATGCTTCCCCAGCTGG...GGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCAGGCTGCAGGGAGCTaGTGCAGAAGTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLQAAGS*CRSGAL
Trigger: CAGGGCACCACTTCTGCAGCAGCTCCCTGCAGCCTG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCTCCACGCGACCATCATaGCTGCCGGCAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLSTRPS*LPADSQ
Trigger: CTGGCTGTCTGCCGGCAGGCATGATGGTCGCGTGGA...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGTTCTTCACCAGGGGTaGCTGGCAGGGCTCGCACAC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLVLHQG*LAGLAH
Trigger: GTGTGCGAGCCCTGCCAGCCACCCCTGGTGAAGAAC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCTGGTGCCCCTCAGCTaGGCCTTGGATGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLLVPLS*ALDGGC
Trigger: GCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGGTTCCCCTTGGAGCTaGAGTGGCAGGTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLGSPWS*SGRLAK
Trigger: CTTGGCCAACCTGCCACTTCAGCTCCAAGGGGAACC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCTGGGCCAGTCAATCATaGGGACAGGCTCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLWASQS*GQARLC
Trigger: GCAGAGCCGAGCCTGTCCTCATGATTGACTGGCCCA...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCCCGAGGAGCCGGGTTaGCTGTCAAGTACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLPEEPG*LSSTAE
Trigger: CTCAGCTGTACTTGACAGTCAACCCGGCTCCTCGGG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTGGTGGGGCTGCACCTaGCAGGCCATGTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWWWGCT*QAMSRG
Trigger: TCCTCGGGACATGGCCTGTCAGGTGCAGCCCCACCA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACCCCTTGCAGACAGGTaGGCTCCCGCTCCACGCGAC +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAPLADR*APAPRD
Trigger: GTCGCGTGGAGCGGGAGCTCACCTGTCTGCAAGGGG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTGAGCAGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCAGGCAGGTGGATCACCTaGGGTCAGGAGTTCGACACC +
Preference number: 4 (lower is better)
Translates to: LSSITSRNHTGCLKLWLAGRWIT*GQEFDT
Trigger: GGTGTCGAACTCCTGACCTCAGGTGATCCACCTGCC...TGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCTGGTCTGAGTGGGTCTaGCCACCTTGGTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLWSEWV*PPWWGS
Trigger: AGACCCCCACCAAGGTGGCCAGACCCACTCAGACCA...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTGCGCCCAGCGCAGGTaGCGAGCTTGTTGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWCAQRR*RACCRA
Trigger: TGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCTGGGCCTTGGATGGTaGATGCGCCCAGCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSALGLGW*MRPAQV
Trigger: CACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGCACACAGCCGCCTGTaGTGGAACCTGGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAAHSRL*WNLGPP
Trigger: TGGTGGCCCCAGGTTCCATCACAGGCGGCTGTGTGC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTGGGGGTCTCCATCGTaGCAGTCCCAGGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWWGSPS*QSQEAA
Trigger: GGCTGCTTCCTGGGACTGTCACGATGGAGACCCCCA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCCCAGCCTCACAGGCTaGGACCTCCATATCTGGACT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLPSLTG*DLHIWT
Trigger: AGTCCAGATATGGAGGTCTCAGCCTGTGAGGCTGGG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGGGCTGTGGGTGGGCTaGCTTCTCTCAGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAGLWVG*LLSERP
Trigger: TGGCCGCTCTGAGAGAAGTCAGCCCACCCACAGCCC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGATCCAAGGGTGGGGCTaGCGTCCAAGTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWIQGWG*RPSGAA
Trigger: AGCAGCCCCACTTGGACGTCAGCCCCACCCTTGGAT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp AGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCACCAACCTCAGGGACACGCTGGTaGAGAGTTGGGTTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SITSRNHTGCLKLWLAPTSGTRW*RVGLEG
Trigger: ACCCTCCAACCCAACTCTTCACCAGCGTGTCCCTGA...GGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp AGCAGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCACCAATGTGGAGGTTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SSITSRNHTGCLKLWLAPMWRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCAACCTCCACAT...TGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGCTGCAGGGAGCTGCTaGAGAAGTGGTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAAAGSC*RSGALE
Trigger: CTCCAGGGCACCACTTCTGCAGCAGCTCCCTGCAGC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCGCGACCATCATGCCTaGCGGCAGACAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSARDHHA*RQTAST
Trigger: AGTGCTGGCTGTCTGCCGGCAGGCATGATGGTCGCG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCACACAGCCCTGGTGCTaGGGTCAATCCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLTQPWC*GQSTCW
Trigger: CCAGCATGTGGATTGACCGCAGCACCAGGGCTGTGT...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGAAGCAGGGATGTGCTaGGGAGCCAGCGGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAEAGMC*GASGGA
Trigger: TGCGCCACCGCTGGCTCCCCAGCACATCCCTGCTTC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGGCAGACAGCCAGCACTaGGCAGGGAAGAACCAGCCC +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWADSQH*AGKNQP
Trigger: GGGCTGGTTCTTCCCTGCCCAGTGCTGGCTGTCTGC...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCTGCTCCTCCTCTAAGTaGGCTGTGTGGCTCCACTCG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLCSSSK*AVWLHS
Trigger: CGAGTGGAGCCACACAGCCCACTTAGAGGAGGAGCA...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACAGCTGGGCCTTGGATaGTGGATGCGCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAQLGLG*WMRPAQ
Trigger: CTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCATGCTGGGGAGTGAGTaGCGCATCATGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLMLGSE*RIMEEQ
Trigger: CTGCTCCTCCATGATGCGCCACTCACTCCCCAGCAT...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGAGGACTGGGTCCCTCTaGGGACAATGGGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWRTGSL*GQWGMR
Trigger: CCTCATCCCCCATTGTCCTCAGAGGGACCCAGTCCT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGTGGCGCATTCCCAGTaGTACCTGAGAGTCGCCCCA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAVAHSQ*YLRVAP
Trigger: TGGGGCGACTCTCAGGTATCACTGGGAATGCGCCAC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCACGACCGCATATAGCTaGTGGCCCGGCAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSATTAYS*WPGREA
Trigger: AGCTTCCCTGCCGGGCCATCAGCTATATGCGGTCGT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCATCCACATGCTGGCCCTaGGTCGGGACAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYASTCWP*VGTGLC
Trigger: ACACAGCCCTGTCCCGACTCAGGGCCAGCATGTGGA...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGGTGGTACTGCAGGGCTaGGTCGCTGCGGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWVVLQG*VAAEDA
Trigger: AGCATCTTCCGCAGCGACTCAGCCCTGCAGTACCAC...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCGGGGAAGGCGTCTGTaGAGGTGCCAGGTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWRGRRL*RCQVVE
Trigger: TTCTACCACCTGGCACCTTCACAGACGCCTTCCCCG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCCCAGCTCTTGTCAGTaGTCACAGACAGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLPSSCQ*SQTAHH
Trigger: GTGGTGAGCTGTCTGTGAGCACTGACAAGAGCTGGG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGGCATCCAGTTGGTGTaGAGTGGAGGAGTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLGIQLV*SGGVEA
Trigger: TGCTTCGACTCCTCCACTGCACACCAACTGGATGCC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCAGTCACCACCACAGTaGACGGCTGGACCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAQSPPQ*TAGPWS
Trigger: GCTCCAAGGTCCAGCCGTGCACTGTGGTGGTGACTG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGGGTGCCTCGGTCTGTaGTCCTCCTCTAAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAGCLGL*SSSKWA
Trigger: AGCCCACTTAGAGGAGGAGCACAGACCGAGGCACCC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGTGGATCAGGCTGAGTaGCAGGAAGACCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAVDQAE*QEDQLG
Trigger: CCCCAGCTGGTCTTCCTGGCACTCAGCCTGATCCAC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGTGGTGCCCTGGAGCTaGAGAAGAGCAGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLVVPWS*RRAENV
Trigger: CACATTCTCTGCTCTTCTCCAGCTCCAGGGCACCAC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGCACTCGCTGGGAGCTaGTCTGAGTGGGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAALAGS*SEWVWP
Trigger: TGGCCAGACCCACTCAGACCAGCTCCCAGCGAGTGC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCTCAGGGTCGAAGGACTaGGTCCCTCTGAGGACAATG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLSGSKD*VPLRTM
Trigger: CATTGTCCTCAGAGGGACCCAGTCCTTCGACCCTGA...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGCCGCGGCATCCAGTTaGTGTGCAGTGGAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAAAASS*CAVEES
Trigger: CGACTCCTCCACTGCACACCAACTGGATGCCGCGGC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGGTCAGGGCTGTGGGTaGGCTGACTTCTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAGQGCG*ADFSQS
Trigger: GCTCTGAGAGAAGTCAGCCCACCCACAGCCCTGACC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCTCAGCAGGCCCAGTTaGGCAGGAGCGCTCAGGATA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWLSRPS*AGALRI
Trigger: TATCCTGAGCGCTCCTGCCCAACTGGGCCTGCTGAG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGCTGATGAACCAGCCTaGGGAAGGCCCACGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAADEPA*GRPTAV
Trigger: GACAGCCGTGGGCCTTCCCCAGGCTGGTTCATCAGC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGGGCTGACGTCCAAGTaGGGCTGCTCTTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAGLTSK*GCSCPP
Trigger: TGGAGGGCAAGAGCAGCCCCACTTGGACGTCAGCCC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCTGCAGCTTAGGGGCTaGACAAGCTGTGCCATTGTC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLLQLRG*TSCAIV
Trigger: GACAATGGCACAGCTTGTCCAGCCCCTAAGCTGCAG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGTGAGTGGCGCATCATaGAGGAGCAGGATGCCATTG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLVSGAS*RSRMPL
Trigger: CAATGGCATCCTGCTCCTCCATGATGCGCCACTCAC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCCATACAAACTATGTTTAGAAATCGGTGCAGGTaGGAGAGGGCGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: HTGCLKLWLAPTPIQTMFRNRCR*ERAASI
Trigger: GATGCTGGCCGCCCTCTCCCACCTGCACCGATTTCT...AAACATAGTTTGTATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCAGAAGTGGGAAAATGTaGAATCGGCCACAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLRSGKM*NRPQGH
Trigger: GTGCCCCTGTGGCCGATTTCACATTTTCCCACTTCT...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCTGAGGAGGGGGACGTaGGCCGATTGGCCACAATTT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWLRRGT*ADWPQF
Trigger: AAATTGTGGCCAATCGGCTCACGTCCCCCTCCTCAG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGTCTTCGATGAGTGCTaGAAATGGCCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLVFDEC*KWPGRL
Trigger: AAGCCTCCCAGGCCATTTTCAGCACTCATCGAAGAC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTTGTTCTGCCCAGGCTaGGCACACAGTCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSALFCPG*AHSPPL
Trigger: CAAGGGAGGACTGTGTGCTCAGCCTGGGCAGAACAA...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTGAGCAGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCAGAGGGTTATAGAGAGTaGAGTGCACAGACACAGCCC +
Preference number: 4 (lower is better)
Translates to: LSSITSRNHTGCLKLWLAEGYRE*SAQTQP
Trigger: GGGCTGTGTCTGTGCACTTCACTCTCTATAACCCTC...TGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp AGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCACCAACCAAACTGCATAGTAGGTaGGGCTCACTCCAACCACGG +
Preference number: 4 (lower is better)
Translates to: SITSRNHTGCLKLWLAPTKLHSR*GSLQPR
Trigger: CCGTGGTTGGAGTGAGCCTCACCTACTATGCAGTTT...GGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCAGGAGGGCTACAGCTaGACAGATGAAGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAQEGYS*TDEDPS
Trigger: GCTGGGGTCTTCATCTGTGCAGCTGTAGCCCTCCTG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTACTGTAGACATGGCTaGTGGAGCTGCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAYCRHG*WSCSPG
Trigger: GCCTGGGGAGCAGCTCCAGCAGCCATGTCTACAGTA...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGGCCCACACAGTAGTTaGTGTACACCACACTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLGPHSS*CTPHCL
Trigger: AAGGCAGTGTGGTGTACAGCAACTACTGTGTGGGCC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCATCAGGATCTGCAGTaGCAGGCTCAGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAHQDLQ*QAQWAA
Trigger: TGCTGCCCACTGAGCCTGGCACTGCAGATCCTGATG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCATAGCCTTGGAAAACTaGTCGACCCAGCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLIALEN*STQQGL
Trigger: AAGGCCCTGCTGGGTCGAGCAGTTTTCCAAGGCTAT...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGCATGAGGTGGTACTaGAGGGCTGAGTCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYASMRWY*RAESLR
Trigger: CCGCAGCGACTCAGCCCTGCAGTACCACCTCATGCT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGAGCAGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCAAAGGTGGCCGGAAACTaGATAGTAGGTGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSSITSRNHTGCLKLWLAKVAGN*IVGEAH
Trigger: GTGAGCCTCACCTACTATGCAGTTTCCGGCCACCTT...TGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCCATACTCCAAGGTGTaGCTCGGGAGGATGAGGGTC +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWPYSKV*LGRMRV
Trigger: GACCCTCATCCTCCCGAGCCACACCTTGGAGTATGG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCACCACAGTGCACGGCTaGACCTTGGAGCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSATTVHG*TLEPLP
Trigger: TGGCAAAGGCTCCAAGGTCCAGCCGTGCACTGTGGT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACCTTTGAGGTCAACCTaGCCGGAGCTCGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAPLRST*PELGSQ
Trigger: CTGGCTTCCGAGCTCCGGCCAGGTTGACCTCAAAGG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCCATACAAACTATGTTTATGCTGGGGAGTGAGTaGCGCATCATGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HTGCLKLWLAPTPIQTMFMLGSE*RIMEEQ
Trigger: CTGCTCCTCCATGATGCGCCACTCACTCCCCAGCAT...AAACATAGTTTGTATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCAAGCCATGGCCCGCTaGTCAGACTTGGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAQAMAR*SDLERP
Trigger: TGGCCTTTCCAAGTCTGACCAGCGGGCCATGGCTTG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAACAGGAGACCCACCCTaGAGGATCCAAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGTGDPP*RIQGWG
Trigger: GCCCCACCCTTGGATCCTTCAGGGTGGGTCTCCTGT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAAAGATGCTGGGGAGTaGGTGGCGCATCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAKDAGE*VAHHGG
Trigger: TCCTCCATGATGCGCCACTCACTCCCCAGCATCTTT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGGCTGGAGGAGGGCCTaGTGTACACCGACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGGWRRA*CTPTAR
Trigger: TCTGGCTGTCGGTGTACAGCAGGCCCTCCTCCAGCC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAATTAGGACCATGGGGTaGCTCGGTCTGTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAIRTMG*LGLCSS
Trigger: GGAGGAGCACAGACCGAGGCACCCCATGGTCCTAAT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACAAACCACTGCTGGGTaGTTGAGTGTGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAQTTAG*LSVGRA
Trigger: TGCCCTCCCCACACTCAAGCACCCAGCAGTGGTTTG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCATCCTGTCCCCAAACTaGAGGCCAAAGAAGCGGTCC +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAILSPN*RPKKRS
Trigger: GGACCGCTTCTTTGGCCTGCAGTTTGGGGACAGGAT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGCAGGTGCAGCCACTaGACACATTGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYASRCSH*THCSWP
Trigger: TGGCCAGGAGCAATGTGTGCAGTGGCTGCACCTGCT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGAAGTCCTTGATGTCTaGTGGCTCAGCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLEVLDV*WLSSLV
Trigger: TACCAAGCTGCTGAGCCAGCAGACATCAAGGACTTC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGCAGCAGGCAGCCTaGAGACACCTTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYARQQAA*RHLSWS
Trigger: TGACCAGGAAAGGTGTCTCCAGGCTGCCTGCTGCCT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGCCTGTGATGGAACCTaGGGCCACCACTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGACDGT*GHHCSR
Trigger: CCTGGAGCAGTGGTGGCCCCAGGTTCCATCACAGGC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACCAGGCGGAAGGCCGTaGGAGCTTCTGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGPGGRP*ELLGEV
Trigger: CACTTCTCCCAGAAGCTCCCACGGCCTTCCGCCTGG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTGCACCCTGATGACATaGGGCTCAGAGACCACACTG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWCTLMT*GSETTL
Trigger: CAGTGTGGTCTCTGAGCCCCATGTCATCAGGGTGCA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACTGGGGAGCCAGCGGTaGCGCATTCCCAGTGATACC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGLGSQR*RIPSDT
Trigger: GGTATCACTGGGAATGCGCCACCGCTGGCTCCCCAG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCCAGTTGGTGTGCAGTaGAGGAGTCGAAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWPVGVQ*RSRSRD
Trigger: ATCCCTGCTTCGACTCCTCCACTGCACACCAACTGG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCCTCAAAGGAAACAGTaGGAGCCGCGGCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWPQRKQ*EPRHPV
Trigger: AACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGAGTTCCGGCCACCACTaGAGACCCTCAGCATCACAA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWSSGHH*RPSASQ
Trigger: TTGTGATGCTGAGGGTCTCCAGTGGTGGCCGGAACT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCAGTGCCAGGCTCAGTaGGCAGCAGGTTTAACTGTG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAQCQAQ*AAGLTV
Trigger: CACAGTTAAACCTGCTGCCCACTGAGCCTGGCACTG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACCCTTGGAGCTGAAGTaGCAGGTTGGCCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAPLELK*QVGQGS
Trigger: TGACCCTTGGCCAACCTGCCACTTCAGCTCCAAGGG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCAGGAATTAGGACCATaGGGTGCCTCGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWQELGP*GASVCA
Trigger: AGCACAGACCGAGGCACCCCATGGTCCTAATTCCTG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACGGGACAGGGCTGTGTaGGCTTCAGTCCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYARDRAV*ASVLVL
Trigger: CAGAACAAGGACTGAAGCCCACACAGCCCTGTCCCG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGCACAGACACAGCCCTaGTGCTGCGGTCAATCCACA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAAQTQP*CCGQST
Trigger: TGTGGATTGACCGCAGCACCAGGGCTGTGTCTGTGC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCTACAGCTGCACAGATaGAGACCCCAGCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSALQLHR*RPQLLS
Trigger: TGACAAGAGCTGGGGTCTTCATCTGTGCAGCTGTAG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAGCAGGTATAGAGGTTaGGGCCCACAACTCCACCAA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSASRYRG*GPQLHQ
Trigger: TTGGTGGAGTTGTGGGCCTCAACCTCTATACCTGCT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGGGAGAAGGACACGGTaGGGCGCGGCGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKGRRTR*GAACAG
Trigger: ACCTGCACACGCCGCGCCTCACCGTGTCCTTCTCCC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGAAACTGCATAGTAGGTaGGGCTCACTCCAACCACGG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWKLHSR*GSLQPR
Trigger: CCGTGGTTGGAGTGAGCCTCACCTACTATGCAGTTT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGAAATGTTCTGGGCTaGCTCCTCGGCCATGTCCTG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYARNVLG*LLGHVL
Trigger: CAGGACATGGCCGAGGAGGCAGCCCAGAACATTTCT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAACCTGGGGCCACCACTaGTCCAGGCCCTTGCGATTA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGTWGHH*SRPLRL
Trigger: TAATCGCAAGGGCCTGGAGCAGTGGTGGCCCCAGGT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAGCCTCCCCCAGGACTaGAGAGTCCCCCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKSLPQD*RVPRRR
Trigger: CCTCCTGCGGGGGACTCTGCAGTCCTGGGGGAGGCT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGAAGCCACAGACACTTaGAGGACGTACGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAEATDT*RTYVSP
Trigger: TGGAGAGACGTACGTCCTGCAAGTGTCTGTGGCTTC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAACTGAAGACGGTGTGTaGTTCCAGACCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYATEDGV*FQTMVG
Trigger: CCCCACCATGGTCTGGAAGCACACACCGTCTTCAGT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCTTCGTGACCATTGGTTaGAGGAGGCAGTTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLFVTIG*RRQFCP
Trigger: AGGACAAAACTGCCTCCTGCAACCAATGGTCACGAA...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAGGTCACCAGGTAAATaGACCTGGACAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSARSPGK*TWTDPR
Trigger: CCTGGGATCTGTCCAGGTGCATTTACCTGGTGACCT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCACGGGCTGACGGGGTaGCTCCCGGGTACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEHGLTG*LPGTGH
Trigger: ATGGCCTGTACCCGGGAGGCACCCCGTCAGCCCGTG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAAGGTGGCCGGAAACTaGATAGTAGGTGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAKVAGN*IVGEAH
Trigger: GTGAGCCTCACCTACTATGCAGTTTCCGGCCACCTT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCATGGAGGAGCAGGATaGCATTGTGTTTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLHGGAG*HCVLNA
Trigger: GGCATTCAAAACACAATGGCATCCTGCTCCTCCATG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGAGCAGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCAGTAATAAAAGTTATGTaGGGCCGGGTGCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: LSSITSRNHTGCLKLWLAVIKVM*GRVQWL
Trigger: GAGCCATTGCACCCGGCCGCACATAACTTTTATTAC...TGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAACGGAATCCCAGATTTaGAGGTGCCCGAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYATESQI*RCPSFH
Trigger: GTGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACCAGGTAAATGCACCTaGACAGATCCCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAPGKCT*TDPRLW
Trigger: CCAGAGCCTGGGATCTGTCCAGGTGCATTTACCTGG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAAACAGGGGCTTCTCTaGACAGGAGAGCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAKQGLL*TGELLG
Trigger: ACCAAGGAGCTCTCCTGTCCAGAGAAGCCCCTGTTT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTGGCTCCTGTGCGTCTaGTATCCTTCCCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAWLLCV*YPSPGI
Trigger: AATTCCTGGGGAAGGATACCAGACGCACAGGAGCCA...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCAAAGTAACAAGCCATaGCCCGCTGGTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWQSNKP*PAGQTW
Trigger: CCAAGTCTGACCAGCGGGCCATGGCTTGTTACTTTG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCCATACAAACTATGTTTGGATGCCTGAAACTGTaGCTAGCACCAACCCCCATA +
Preference number: 4 (lower is better)
Translates to: HTGCLKLWLAPTPIQTMFGCLKL*LAPTPI
Trigger: TATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCC...AAACATAGTTTGTATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCGCTGGGAGCTGGTCTaGGTGGGTCTGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKRWELV*VGLATL
Trigger: CAAGGTGGCCAGACCCACTCAGACCAGCTCCCAGCG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGAGGGCTCGCACACGATaGAAAGTTGCTGTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWRARTR*KVAVLE
Trigger: CTCTAAGACAGCAACTTTTCATCGTGTGCGAGCCCT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGACCTCGGAGATCACACTaGCAGGGGCCTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRPRRSH*QGPGLA
Trigger: TGCGAGCCCAGGCCCCTGTCAGTGTGATCTCCGAGG...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGATCATAGCTGTCACTaGGCCATTGTGCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSADHSCH*AIVPQR
Trigger: CCTTTGAGGCACAATGGCTCAGTGACAGCTATGATC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCACATGCAGAAGACACTaGAGACGGTGTGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSATCRRH*RRCVLP
Trigger: TGGAAGCACACACCGTCTTCAGTGTCTTCTGCATGT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCCACTGCTGGGTGCTTaGGTGTGGGGAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEPLLGA*VWGGQQ
Trigger: CTGCTGCCCTCCCCACACTCAAGCACCCAGCAGTGG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTGTGGTACTGCAGGGCTaGGTCGCTGCGGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLVVLQG*VAAEDA
Trigger: AGCATCTTCCGCAGCGACTCAGCCCTGCAGTACCAC...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGGCCACAATTTTCTTCTaGACCCTGATGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWATIFF*TLMTWG
Trigger: GCCCCATGTCATCAGGGTGCAGAAGAAAATTGTGGC...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCGAGGCGATGGTAGCTaGAGTTCACTTTTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWRGDGS*SSLFQE
Trigger: CTCCTGAAAAAGTGAACTGCAGCTACCATCGCCTCG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGTCCCTCCAAACCACTaGTGGGTGCTTGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGVPPNH*WVLECG
Trigger: CCCACACTCAAGCACCCAGCAGTGGTTTGGAGGGAC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGCCTTGGATGGTGGATaGGCCCAGCGCAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKALDGG*AQRRWR
Trigger: TCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACAGACACAGCCCTGGTaGTGCGGTCAATCCACATGC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGQTQPW*CGQSTC
Trigger: GCATGTGGATTGACCGCAGCACCAGGGCTGTGTCTG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGAGCTGCTGCAGAAGTaGTGCCCTGGAGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGELLQK*CPGAGE
Trigger: TTCTCCAGCTCCAGGGCACCACTTCTGCAGCAGCTC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCAGGAAGCAGCCCCGTaGCCACATCCTCCGCACAGC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKQEAAP*PHPPHS
Trigger: GCTGTGCGGAGGATGTGGCCACGGGGCTGCTTCCTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGGTGGCTCTGTAGCTTaGAAATGTCACTCACTTCAA +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLGGSVA*KCHSLQ
Trigger: TTGAAGTGAGTGACATTTCCAAGCTACAGAGCCACC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCAGCAAGTTTTCTGGGTaGCTCTGTAGCTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLSKFSG*LCSLEM
Trigger: CATTTCCAAGCTACAGAGCCACCCAGAAAACTTGCT...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCACCGACAGCCAGACATaGAAATCCTCCAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSATDSQT*KSSRYS
Trigger: AGAGTACCTGGAGGATTTCCATGTCTGGCTGTCGGT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAAAGCGGTCCCACAAATaGCCCACACTGCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGKRSHK*PTLQSS
Trigger: GGAGCTCTGCAGTGTGGGCCATTTGTGGGACCGCTT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp AGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCACCAACCGGTGAAGAGTTGGGTTaGAGGGTTATAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SITSRNHTGCLKLWLAPTGEELG*RVIESE
Trigger: TTCACTCTCTATAACCCTCCAACCCAACTCTTCACC...GGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCAGACTGCGATGCCGTaGAGCTGGGGGTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEQTAMP*SWGCEE
Trigger: TTCCTCGCACCCCCAGCTTCACGGCATCGCAGTCTG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGGCATTTACCAGAGCTaGGGAGGGGGACGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEGIYQS*GGGREP
Trigger: CGGCTCACGTCCCCCTCCTCAGCTCTGGTAAATGCC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGACTGTCAAGTACAGCTaGGCTTTACCCAGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWTVKYS*ALPSKP
Trigger: TGGCTTACTGGGTAAAGCTCAGCTGTACTTGACAGT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTCGCTGCGGAAGATGCTaGATGACTCCACCAGGGATG +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLRCGRC*MTPPGM
Trigger: CATCCCTGGTGGAGTCATTCAGCATCTTCCGCAGCG...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGACCAGCTGGGGAAGCATaGGGTGGTACTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRPAGEA*GGTAGL
Trigger: CAGCCCTGCAGTACCACCTCATGCTTCCCCAGCTGG...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCGGCAAAGTCCTCTGTaGAACTGGTTAGTGACATCT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWRQSPL*NWLVTS
Trigger: AGATGTCACTAACCAGTTTCACAGAGGACTTTGCCG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCACTGCTCCAGGCCCTTaGGATTATAATGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLTAPGP*DYNERF
Trigger: AAACCTTTCATTATAATCGCAAGGGCCTGGAGCAGT...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTGCTGTACACCACACTaGCTTCAATCTGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWCCTPH*LQSEPW
Trigger: CCAAGGTTCAGATTGAAGGCAGTGTGGTGTACAGCA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGCCCCAGCAGGACTGTaGCCAGCAAGGTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRAPAGL*PARSPG
Trigger: ACCTGGTGACCTTGCTGGGCACAGTCCTGCTGGGGC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAAAGCCGAGTCCCCCTTaGAGACAGGTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRKPSPP*RQVSSR
Trigger: GCGGGAGCTCACCTGTCTGCAAGGGGGACTCGGCTT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTTCAGTCACACAGCCCTGGTGCTaGGGTCAATCCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: GSKYDHDAIAILLCFLSVTQPWC*GQSTCW
Trigger: CCAGCATGTGGATTGACCGCAGCACCAGGGCTGTGT...GACTGAAAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTCAGACACAGCCCTGGTaGTGCGGTCAATCCACATGC +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLQTQPW*CGQSTC
Trigger: GCATGTGGATTGACCGCAGCACCAGGGCTGTGTCTG...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAACTCTCTTCTGTCCTTaGCTCCCCTGTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYATLFCP*LPCVVG
Trigger: TCCAACAACACAGGGGAGGCAAGGACAGAAGAGAGT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGGGAGCTGGTCTGAGTaGGTCTGGCCACCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEGSWSE*VWPPWW
Trigger: CCACCAAGGTGGCCAGACCCACTCAGACCAGCTCCC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGGCCGTGGGAGCTTCTaGGAGAAGTGGGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGGRGSF*EKWENV
Trigger: CACATTTTCCCACTTCTCCCAGAAGCTCCCACGGCC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTTCACCAGGGGTGGCTaGCAGGGCTCGCACACGATG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKFTRGG*QGSHTM
Trigger: CATCGTGTGCGAGCCCTGCCAGCCACCCCTGGTGAA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGTGATGACTCTGAAATaGCACCGAGTCCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGVMTLK*HRVPAS
Trigger: GCTCGCTGGGACTCGGTGCCATTTCAGAGTCATCAC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTGGGTGTCTCTCCCATaGTACAAAGTGTGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWWVSLP*YKVCLE
Trigger: CTCCAAACACACTTTGTACCATGGGAGAGACACCCA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTTTGTCAATCACAAATaGCCCCGAGAACTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAFVNHK*PRELAL
Trigger: CAAGGCCAGTTCTCGGGGCCATTTGTGATTGACAAA...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCACGTTTTGGTTCTCTaGGTCTATCAGGTAGGGGTT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWHVLVL*VYQVGV
Trigger: AACCCCTACCTGATAGACCCAGAGAACCAAAACGTG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTGCCAGGAAGACCAGCTaGGGAAGCATGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLARKTS*GSMRWY
Trigger: GTACCACCTCATGCTTCCCCAGCTGGTCTTCCTGGC...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACTCCAGCCAGTTCCTTaGCTTTCGCCAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGLQPVP*LSPVAE
Trigger: CTCAGCTACTGGCGAAAGCCAAGGAACTGGCTGGAG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTCAAGCCATGGCCCGCTaGTCAGACTTGGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLQAMAR*SDLERP
Trigger: TGGCCTTTCCAAGTCTGACCAGCGGGCCATGGCTTG...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACATCTGTGCCGAAGTTaGTCCAGCACTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGHLCRS*SSTQRP
Trigger: TGGCCTTTGAGTGCTGGATCAACTTCGGCACAGATG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAACACTGCCTTCAATCTaGACCTTGGCAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGTLPSI*TLARAV
Trigger: CACTGCCCTTGCCAAGGTTCAGATTGAAGGCAGTGT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCAGCAACCAGGGCAGTaGGACACGCGTAGACGCACA +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEQQPGQ*DTRRRT
Trigger: TGTGCGTCTACGCGTGTCTCACTGCCCTGGTTGCTG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCTGTGGTCAGCCCCATaGACCTGCAGCTTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKLWSAP*TCSLGA
Trigger: AGCCCCTAAGCTGCAGGTTCATGGGGCTGACCACAG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAAAGCAGAAGCAGCATaGGGATGTCCATGGAAATGT +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAKAEAA*GCPWKC
Trigger: ACATTTCCATGGACATCCTCATGCTGCTTCTGCTTT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTACACACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATCGGGGAAGGCGTCTGTaGAGGTGCCAGGTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: VHTHTMEYHSAFKRRSCHRGRRL*RCQVVE
Trigger: TTCTACCACCTGGCACCTTCACAGACGCCTTCCCCG...ATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGTGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGATCTTGTCCCACATCTaGACTCTCCGAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWILSHI*TLRMVI
Trigger: AATCACCATTCGGAGAGTTCAGATGTGGGACAAGAT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAAGAGAATGTGCTGTCTaGGGTCCCAGTAGCACACAG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGRECAV*GPSSTQ
Trigger: CTGTGTGCTACTGGGACCGCAGACAGCACATTCTCT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAGAACCAGACTGCGATaGCGTGAAGCTGGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWERTRLR*REAGGA
Trigger: CGCACCCCCAGCTTCACGGCATCGCAGTCTGGTTCT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGCTCAGAGACCACACTaGTCATCCTGTTGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGAQRPH*SSCWKP
Trigger: AGGCTTCCAACAGGATGAGCAGTGTGGTCTCTGAGC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGAATGGTGTGGTCGTTaGATCAGGATCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGEWCGR*IRICSA
Trigger: GGCACTGCAGATCCTGATGCAACGACCACACCATTC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCATTACCCAGTAAGCCATaGTTCGAAGCCACAGACACT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYALPSKP*FEATDT
Trigger: AGTGTCTGTGGCTTCGAAGCATGGCTTACTGGGTAA...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCAACATGACGGGAAATaGCCTTGTAACAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWQHDGK*PCNRFG
Trigger: TCCAAACCTGTTACAAGGGCATTTCCCGTCATGTTG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCAGCCCTGTCCCGTGTaGAGCTCCTTCACCATCACG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKQPCPV*SSFTIT
Trigger: CGTGATGGTGAAGGAGCTGCACACGGGACAGGGCTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAAAGTGGGGCTGCTCTTaGCCTCCAGCAGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRKWGCS*PPAATR
Trigger: CCTGGTTGCTGCTGGAGGGCAAGAGCAGCCCCACTT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACCATCAGAGAAGTCCTaGTGTGGTCAGCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGPSEKS*CGQPHE
Trigger: TTCATGGGGCTGACCACAGCAGGACTTCTCTGATGG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGTCCAGGAACGTTCTaGCAATTCAGAGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYASPGTF*QFRVQI
Trigger: GATCTGGACTCTGAATTGGCAGAACGTTCCTGGACT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATCAGGGCAGCCCGTGTaGGACTCTCTCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRSGQPV*DSLSSS
Trigger: GGATGAGGAGAGAGAGTCGCACACGGGCTGCCCTGA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAGCATGAGGTGGTACTaGAGGGCTGAGTCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: THTQWNIIQLSKGDLVICSMRWY*RAESLR
Trigger: CCGCAGCGACTCAGCCCTGCAGTACCACCTCATGCT...GCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp AGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCATTGTGTTTTGAATaGCAGGAAGATAGACGCATT +
Preference number: 4 (lower is better)
Translates to: SITSRNHTGCLKLWLAPTPLCFE*QEDRRI
Trigger: AATGCGTCTATCTTCCTGGCATTCAAAACACAATGG...GGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTGCCCCCACCAGCCCTaGTACAAAGATGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKCPHQP*YKDAGE
Trigger: CTCCCCAGCATCTTTGTAGCAGGGCTGGTGGGGGCA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTCAGCTCTTCTCACCTaGAAAACTAGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWSALLT*KTRMSA
Trigger: AGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTGA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCAGTCATGGGCTCTGTaGGGGTTCCCCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEQSWAL*GFPLEL
Trigger: CAGCTCCAAGGGGAACCCCCACAGAGCCCATGACTG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGTGTATTCGTGACCATTaGTTGCAGGAGGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWCIRDH*LQEAVL
Trigger: CAAAACTGCCTCCTGCAACCAATGGTCACGAATACA...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGACAGGAGAGCTCCTTaGTTTCTGACAGTCCATTGT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYADRRAP*FLTVHC
Trigger: ACAATGGACTGTCAGAAACCAAGGAGCTCTCCTGTC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTGTGCAGGTAGCGGCTaGAGGAGGGCCTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKCAGSG*RRACCT
Trigger: TGTACAGCAGGCCCTCCTCCAGCCGCTACCTGCACA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp AAATATGCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTGCACAGACACAGCCCTaGTGCTGCGGTCAATCCACA +
Preference number: 4 (lower is better)
Translates to: KYAQGSKYDHDAIAILLCAQTQP*CCGQST
Trigger: TGTGGATTGACCGCAGCACCAGGGCTGTGTCTGTGC...ACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTGTGAGTGGCGCATCATaGAGGAGCAGGATGCCATTG +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLVSGAS*RSRMPL
Trigger: CAATGGCATCCTGCTCCTCCATGATGCGCCACTCAC...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACTGCTACAAAGATGCTaGGGAGTGAGTGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGLLQRC*GVSGAS
Trigger: TGATGCGCCACTCACTCCCCAGCATCTTTGTAGCAG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAGAAATCGGTGCAGGTaGGAGAGGGCGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWERNRCR*ERAASI
Trigger: GATGCTGGCCGCCCTCTCCCACCTGCACCGATTTCT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGATTCCCAGTGATACCTaGGAGTCGCCCCAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEIPSDT*ESPQGR
Trigger: ACGACCCTGGGGCGACTCTCAGGTATCACTGGGAAT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCTTTCAGTGGAAACCATaGCTTTGTAATTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLFQWKP*LCNCPS
Trigger: ACTTGGACAATTACAAAGTCATGGTTTCCACTGAAA...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTCAGGGACACGCTGGTaGAGAGTTGGGTTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKSGTRW*RVGLEG
Trigger: ACCCTCCAACCCAACTCTTCACCAGCGTGTCCCTGA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCGCTGCGGAAGATGCTaGATGACTCCACCAGGGATG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWERCGRC*MTPPGM
Trigger: CATCCCTGGTGGAGTCATTCAGCATCTTCCGCAGCG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGCTTTCGCCAGTAGCTaGGGACGCCCTTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRAFASS*GRPCPS
Trigger: TGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAGC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTTCAGTCAGCCCTCTGATTCCATaGTGCCATAAGGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: GSKYDHDAIAILLCFLSVSPLIP*CHKGEV
Trigger: GACCTCACCCTTATGGCATCATGGAATCAGAGGGCT...GACTGAAAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp CATTCTGCTCTGTTTTCTTTCAGTCTCCATGTAAATGCTTTGTACAATAGTCCCAAAGATGCTGGGGAGTaGGTGGCGCATCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: HSALFSFSLHVNALYNSPKDAGE*VAHHGG
Trigger: TCCTCCATGATGCGCCACTCACTCCCCAGCATCTTT...GGGACTATTGTACAAAGCATTTACATGGAGACTGAAAGAAAACAGAGCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCAGACAGTCATGCTGTaGCAAGCCTGGCTGTCACCC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKQTVML*QAWLSP
Trigger: GGGTGACAGCCAGGCTTGGCACAGCATGACTGTCTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGATATACCAGACAGTCATaGTGTGCCAAGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGYTRQS*CAKPGC
Trigger: ACAGCCAGGCTTGGCACAGCATGACTGTCTGGTATA...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCATCCTTCGAGTTTTCTTaGTCAGAGACTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYASFEFS*SETSQT
Trigger: AGTCTGGGAAGTCTCTGAGCAAGAAAACTCGAAGGA...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCTTGCGTGGCTCCTGTaGGTCTGGTATCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKLAWLL*VWYPSP
Trigger: TGGGGAAGGATACCAGACGCACAGGAGCCACGCAAG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGACCTTCCTTTGGGCCCTaGCACTCCCAGAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRPSFGP*HSQREW
Trigger: CCATTCTCTCTGGGAGTGGCAGGGCCCAAAGGAAGG...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGGGCTGGACAAGCTGTaGCATTGTCACTTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKGLDKL*HCHLPP
Trigger: AGGCGGCAAGTGACAATGGCACAGCTTGTCCAGCCC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGAGAGGGACAGCAGGTaGAGCCACTGCACACATTGC +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEERDSR*SHCTHC
Trigger: GCAATGTGTGCAGTGGCTGCACCTGCTGTCCCTCTC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAAGTGGATCAGGCTGAGTaGCAGGAAGACCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQVDQAE*QEDQLG
Trigger: CCCCAGCTGGTCTTCCTGGCACTCAGCCTGATCCAC...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGCCCTGCTACAAAGATaGTGGGGAGTGAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEALLQR*WGVSGA
Trigger: TGCGCCACTCACTCCCCAGCATCTTTGTAGCAGGGC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAATGCCCCCACCAGCCCTaGTACAAAGATGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQCPHQP*YKDAGE
Trigger: CTCCCCAGCATCTTTGTAGCAGGGCTGGTGGGGGCA...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGCAGAAGTGGTGCCCTaGAGCTGGAGAAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEAEVVP*SWRRAE
Trigger: CTCTGCTCTTCTCCAGCTCCAGGGCACCACTTCTGC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAAATTTCGAGCTAGGATaGCCACAGGAGGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGNFELG*PQEDAE
Trigger: CTCAGCATCCTCCTGTGGCCATCCTAGCTCGAAATT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGCTGAAGTGGCAGGTTaGCCAAGGGTCACGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRAEVAG*PRVTGE
Trigger: TTCACCCGTGACCCTTGGCCAACCTGCCACTTCAGC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAGTAGACTCCAGTCATaGGCTCTGTGGGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKSRLQS*ALWGFP
Trigger: GGGGAACCCCCACAGAGCCCATGACTGGAGTCTACT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGCTGGTGTCCTTAGCTaGCTGTCTTCCTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEAGVLS*LSSSRW
Trigger: CCATCGGGAGGAAGACAGCCAGCTAAGGACACCAGC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAACTGCTCAGAGAGTATaGCTTGATTGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYATAQRV*LDCHCL
Trigger: CAGACAGTGACAATCAAGCCATACTCTCTGAGCAGT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCACTCACTTCAAAACTaGCCTTCAGCTTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWHSLQN*PSAFSL
Trigger: TAAGGAGAAAGCTGAAGGCCAGTTTTGAAGTGAGTG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCCTCCAAACCACTGCTaGGTGCTTGAGTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEPPNHC*VLECGE
Trigger: CTCCCCACACTCAAGCACCCAGCAGTGGTTTGGAGG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCATACCATAAGTGGCTaGGTGATGAAAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWHTISG*VMKIQQ
Trigger: CTGCTGTATTTTCATCACCCAGCCACTTATGGTATG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGGCCATCCAGAAGTGTaGTCAGACTCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEGHPEV*SDSSPT
Trigger: GGTGGGACTGGAGTCTGACCACACTTCTGGATGGCC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTGGGGAAGCATGAGGTaGTACTGCAGGGCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKWGSMR*YCRAES
Trigger: CGACTCAGCCCTGCAGTACCACCTCATGCTTCCCCA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GTACACACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTGGGGAAGCATGAGGTaGTACTGCAGGGCTGAGTCG +
Preference number: 4 (lower is better)
Translates to: VHTHTMEYHSAFKRRSCHWGSMR*YCRAES
Trigger: CGACTCAGCCCTGCAGTACCACCTCATGCTTCCCCA...ATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGTGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGCCAGGAAGACCAGCTaGGGAAGCATGAGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEARKTS*GSMRWY
Trigger: GTACCACCTCATGCTTCCCCAGCTGGTCTTCCTGGC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGACACTGCTGGAGTTCATaGACGCAGACACGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRHCWSS*TQTRPH
Trigger: ATGAGGCCGTGTCTGCGTTCATGAACTCCAGCAGTG...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAACCACAGTGCTTTTCTaGTTCACTTGGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGTTVLF*FTWESA
Trigger: TGCTGACTCCCAAGTGAATCAGAAAAGCACTGTGGT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGAAAGCTCAGTGAACTaGTGGAGATTCACTTTATCC +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAESSVN*WRFTLS
Trigger: GGATAAAGTGAATCTCCATCAGTTCACTGAGCTTTC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAAGCTTTCGCCAGTAGCTaGGGACGCCCTTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQAFASS*GRPCPS
Trigger: TGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAGC...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGATCTCAGAACCAGACTaGGATGCCGTGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKISEPD*DAVKLG
Trigger: CCCCAGCTTCACGGCATCGCAGTCTGGTTCTGAGAT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGTCCCAGATTTGGAGGTaGCCGAGCTTCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWESQIWR*PSFHFQ
Trigger: CTGGAAGTGGAAGCTCGGGCACCTCCAAATCTGGGA...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAACAACTCCACCAATCTaGCCAGGAGCTTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRTTPPI*PGAWLP
Trigger: AGGGAGCCAAGCTCCTGGGCAGATTGGTGGAGTTGT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATGTGCCATTGTCACTTaGCGCCTTCCTTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRCAIVT*RLPLGP
Trigger: AGGGCCCAAAGGAAGGCGGCAAGTGACAATGGCACA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGACAAATGGCCCACACTaGAGAGCTCCACCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKTNGPH*RAPPRL
Trigger: CAGCCTTGGTGGAGCTCTGCAGTGTGGGCCATTTGT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACACAGTCAGGAATACTaGAGCTTGAAGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGHSQEY*SLKRRG
Trigger: TCCCCTTCTCTTCAAGCTGCAGTATTCCTGACTGTG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGGAGGCTTGCATAAATaGCTAGGAAAAACTTTTAGC +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAGGLHK*LGKTFS
Trigger: GCTAAAAGTTTTTCCTAGGCATTTATGCAAGCCTCC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTGGTGAGGTCCATAAATaGTCGGCAAAGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLGEVHK*SAKSSV
Trigger: CACAGAGGACTTTGCCGAGCATTTATGGACCTCACC...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp ACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACAACGCCCTGCTACAAAGATaGTGGGGAGTGAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: TQWNIIQLSKGDLVICNNALLQR*WGVSGA
Trigger: TGCGCCACTCACTCCCCAGCATCTTTGTAGCAGGGC...GTTGTTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAATCACACGATACCATTaGGGGATGCTGAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAITRYH*GMLSLF
Trigger: AAAAAGACTCAGCATCCCCCAATGGTATCGTGTGAT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCTGACCCAGGAGATGTaGACGAATCTGAACGCCGAG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKLTQEM*TNLNAE
Trigger: CTCGGCGTTCAGATTCGTCCACATCTCCTGGGTCAG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGGTACAAAGTGTGTTTaGAGGTGTTTCCTATCTGGT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAGTKCV*RCFLSG
Trigger: ACCAGATAGGAAACACCTCCAAACACACTTTGTACC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCATTGGCTCCCTGGATATaGGTTCTTCTTGAAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYALAPWI*VLLEEY
Trigger: ATACTCTTCAAGAAGAACCCATATCCAGGGAGCCAA...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAAGGAGCTTGGCTCCCTaGATATGGGTTCTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGRSLAP*IWVLLE
Trigger: TTCAAGAAGAACCCATATCCAGGGAGCCAAGCTCCT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGATCTGCCCAGGAGCTTaGCTCCCTGGATATGGGTTC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKICPGA*LPGYGF
Trigger: GAACCCATATCCAGGGAGCCAAGCTCCTGGGCAGAT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCATAAATAGCCTACACTaGCATCTTTCTGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAINSLH*HLSEKQ
Trigger: CTGCTTCTCAGAAAGATGCCAGTGTAGGCTATTTAT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGATTCAGGAGAAGTCCCTaGTTGTGGAGAGAAACGTTC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGFRRSP*LWRETF
Trigger: GAACGTTTCTCTCCACAACCAGGGACTTCTCCTGAA...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGTGCAGGTTGCTTGCGTaGCTCCTGTGCGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWECRLLA*LLCVWY
Trigger: ATACCAGACGCACAGGAGCCACGCAAGCAACCTGCA...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAGGGCCCTTGACCACTaGGGCATTAGTCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKRALDH*GISPSK
Trigger: TTTGGAGGGACTAATGCCCCAGTGGTCAAGGGCCCT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGATCCTCACACATAGCTTaGAGAGAGAGTTCGTCATTC +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGSSHIA*RESSSF
Trigger: GAATGACGAACTCTCTCTTCAAGCTATGTGTGAGGA...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAACTCAAGCTAGGTCCTaGTCCTGGAAAGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRTQARS*SWKAGV
Trigger: GACACCAGCTTTCCAGGATCAGGACCTAGCTTGAGT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATGCATCCTGTATTCGTaGCCATTGGTTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRCILYS*PLVAGG
Trigger: GCCTCCTGCAACCAATGGTCACGAATACAGGATGCA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATTAGCCATTGCCTGTTaGTGGGTCTTCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRLAIAC*WVFCWS
Trigger: GCTCCAGCAGAAGACCCATCAACAGGCAATGGCTAA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAACAATGTACACCTTTaGGGTCAACCTGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKNNVHL*GQPGRS
Trigger: GCTCCGGCCAGGTTGACCTCAAAGGTGTACATTGTT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGAGCTCCTTGGTTTCTaGCAGTCCATTGTCGCCACA +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKELLGF*QSIVAT
Trigger: TGTGGCGACAATGGACTGTCAGAAACCAAGGAGCTC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGAGGGTTATAGAGAGTaGAGTGCACAGACACAGCCC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTREGYRE*SAQTQP
Trigger: GGGCTGTGTCTGTGCACTTCACTCTCTATAACCCTC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTCGGCAAAGTCCTCTGTaGAACTGGTTAGTGACATCT +
Preference number: 4 (lower is better)
Translates to: AQGSKYDHDAIAILLCFLRQSPL*NWLVTS
Trigger: AGATGTCACTAACCAGTTTCACAGAGGACTTTGCCG...AAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAGCCCTCTGATTCCATaGTGCCATAAGGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKSPLIP*CHKGEV
Trigger: GACCTCACCCTTATGGCATCATGGAATCAGAGGGCT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGAGACGCATTTTAATGTaGAGAGGAATAAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWRRILM*RGIRGF
Trigger: GAATCCTCTTATTCCTCTTCACATTAAAATGCGTCT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGACTTCTTCTGGGAAAATaGAACAGCAGCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRLLLGK*NSSPGK
Trigger: CTTCCCCGGGCTGCTGTTTCATTTTCCCAGAAGAAG...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTACACACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATCTTCTTCTGGGAAAATaGAACAGCAGCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VHTHTMEYHSAFKRRSCHLLLGK*NSSPGK
Trigger: CTTCCCCGGGCTGCTGTTTCATTTTCCCAGAAGAAG...ATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGTGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp GGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTCTTTCAGTCCCAGTCTCAGAAAGGTaGGGACCTTTTCCCACATAT +
Preference number: 4 (lower is better)
Translates to: GSKYDHDAIAILLCFLSVPVSER*GPFPTY
Trigger: ATATGTGGGAAAAGGTCCTCACCTTTCTGAGACTGG...GACTGAAAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGCAGCCCCACTACTCTaGAGAAGGGAACTTCTATCC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRAAPLL*RRELLS
Trigger: GGATAGAAGTTCCCTTCTGCAGAGTAGTGGGGCTGC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGTCCGGAACTCCATCTaGCCAGTGCTAACATGGTTC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRVRNSI*PVLTWF
Trigger: GAACCATGTTAGCACTGGGCAGATGGAGTTCCGGAC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGATTTTTCAACCTCGCCTaGACAGTCAGGAATACTGCA +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGFFNLA*TVRNTA
Trigger: TGCAGTATTCCTGACTGTGCAGGCGAGGTTGAAAAA...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTCATCAGAAATGTTCTaGGCTGCCTCCTCGGCCATG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKSSEMF*AASSAM
Trigger: CATGGCCGAGGAGGCAGCCCAGAACATTTCTGATGA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGGGATGAGGTGGTCCTaGAGAAGAATAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKGMRWS*RRIGVC
Trigger: GCACACACCTATTCTTCTCCAGGACCACCTCATCCC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCCCGTGAGAATGGTGTaGTCGTTGCATCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKPVRMV*SLHQDL
Trigger: CAGATCCTGATGCAACGACCACACCATTCTCACGGG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGACACTCCCAGAGAGAATaGCTGATGCAGGTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRHSQRE*LMQVAC
Trigger: GCAAGCAACCTGCATCAGCCATTCTCTCTGGGAGTG...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACTCCAGCCAGTTCCTTaGCTTTCGCCAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQLQPVP*LSPVAE
Trigger: CTCAGCTACTGGCGAAAGCCAAGGAACTGGCTGGAG...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCCTGCTACAAAGATGCTaGGGAGTGAGTGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: THTQWNIIQLSKGDLVICLLQRC*GVSGAS
Trigger: TGATGCGCCACTCACTCCCCAGCATCTTTGTAGCAG...GCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTTCCAAAACACAGTGTaGCAGAGACTATTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAFQNTV*QRLLKG
Trigger: TCCTTTTAATAGTCTCTGCCACACTGTGTTTTGGAA...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCCATACAAACTATGTTTTTCCAAAACACAGTGTaGCAGAGACTATTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HTGCLKLWLAPTPIQTMFFQNTV*QRLLKG
Trigger: TCCTTTTAATAGTCTCTGCCACACTGTGTTTTGGAA...AAACATAGTTTGTATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAAAGGACACGTTATATaGAGGAATAGATGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAKGHVI*RNRWKV
Trigger: CACTTTCCATCTATTCCTTCATATAACGTGTCCTTT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGGAAGCCAGTGTCAATaGCGACCGCATATAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEGSQCQ*RPHIAD
Trigger: ATCAGCTATATGCGGTCGTCATTGACACTGGCTTCC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGTCACTGAGCCATTGTaGCTCAAAGGAAACAGTGGG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEVTEPL*LKGNSG
Trigger: CCCACTGTTTCCTTTGAGGCACAATGGCTCAGTGAC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGGTGAGGTCCATAAATaGTCGGCAAAGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEGEVHK*SAKSSV
Trigger: CACAGAGGACTTTGCCGAGCATTTATGGACCTCACC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp AAATATGCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTCATGGAGGAGCAGGATaGCATTGTGTTTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: KYAQGSKYDHDAIAILLCHGGAG*HCVLNA
Trigger: GGCATTCAAAACACAATGGCATCCTGCTCCTCCATG...ACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGACTCAAAGGCCACACTaGCATTTACCAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKTQRPH*HLPELR
Trigger: CCTCAGCTCTGGTAAATGCCAGTGTGGCCTTTGAGT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCAATGGGGGATGAGGTaGTCCTGGAGAAGAATAGGT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKQWGMR*SWRRIG
Trigger: ACCTATTCTTCTCCAGGACCACCTCATCCCCCATTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGTGCTGAAAATGGCCTaGGAGGCTTGCATAAATGCC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRVLKMA*EACINA
Trigger: GGCATTTATGCAAGCCTCCCAGGCCATTTTCAGCAC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACAAAGTAACAAGCCATaGCCCGCTGGTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQQSNKP*PAGQTW
Trigger: CCAAGTCTGACCAGCGGGCCATGGCTTGTTACTTTG...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGTCCTTGATGTCTGCTaGCTCAGCAGCTTGGTAACT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEVLDVC*LSSLVT
Trigger: AGTTACCAAGCTGCTGAGCCAGCAGACATCAAGGAC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACCAATCATTTCTTCCTaGTCTACAAAAGCCAATCTG +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGPIISS*STKANL
Trigger: CAGATTGGCTTTTGTAGATCAGGAAGAAATGATTGG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCCAGTCTCAGAAAGGTaGGGACCTTTTCCCACATAT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEPVSER*GPFPTY
Trigger: ATATGTGGGAAAAGGTCCTCACCTTTCTGAGACTGG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACAACGGCAAGAGAATTGCTTaGACCTGGGATGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TQWNIIQLSKGDLVICNNGKRIA*TWDVEV
Trigger: AACCTCCACATCCCAGGTTCAAGCAATTCTCTTGCC...GTTGTTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGGAAAAACTTTTAGCTaGCTAATTACGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: TICNSRATGKLTIWEKAGGKTFS*LITELP
Trigger: AGGCAGTTCCGTAATTAGGCAGCTAAAAGTTTTTCC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAAACTCTCTTCTGTCCTTaGCTCCCCTGTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQTLFCP*LPCVVG
Trigger: TCCAACAACACAGGGGAGGCAAGGACAGAAGAGAGT...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAAATGTTCTTCTGCCTaGAAGCTGATGAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKKCSSA*KLMRMG
Trigger: GCCCATCCTCATCAGCTTCCAGGCAGAAGAACATTT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCTTCAATCTGAACCTTaGCAAGGGCAGTGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWELQSEP*QGQCSS
Trigger: GGAACTACACTGCCCTTGCCAAGGTTCAGATTGAAG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGGAGTATTCATCTTaGGAAAATCTCCCATATATT +
Preference number: 4 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAREYSS*ENLPYI
Trigger: AATATATGGGAGATTTTCCCAAGATGAATACTCCCT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGTCTCCAGAAGCCATATaGACACGGAATCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWESPEAI*TRNPRF
Trigger: AAATCTGGGATTCCGTGTTCATATGGCTTCTGGAGA...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGTCAGAGAGTATGGCTTaGTTGTCACTGTCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWESESMA*LSLSVL
Trigger: CAGAACAGACAGTGACAATCAAGCCATACTCTCTGA...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp AAATATGCTCAAGGATCAAAATATGACCATGACGCTATTGCCATTCTGCTCTGTTTTGGGGTAAAGTCATaGGAAAACCTCTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: KYAQGSKYDHDAIAILLCFGVKS*ENLSAF
Trigger: GAATGCTGAGAGGTTTTCTCATGACTTTACCCCAAA...ACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGCATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACTGAGGCAAGAGAATTaGTTGAACCTGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQLRQEN*LNLGCG
Trigger: TCCACATCCCAGGTTCAAGCAATTCTCTTGCCTCAG...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCTGTCTTCCTCCCGATaGTATTGCTTCTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWELSSSR*YCFLNV
Trigger: GACATTCAAGAAGCAATACCATCGGGAGGAAGACAG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGATCTGTAGAGATTCCTaGGGGTTTTCGGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKICRDS*GFSESS
Trigger: TGAGCTTTCCGAAAACCCCCAGGAATCTCTACAGAT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGGTGAAGAGTTGGGTTaGAGGGTTATAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKGEELG*RVIESE
Trigger: TTCACTCTCTATAACCCTCCAACCCAACTCTTCACC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAATTGGCTGTTGGGTaGGTTAAGCAAAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEKLAVG*VKQNRV
Trigger: GACCCTGTTTTGCTTAACCCACCCAACAGCCAATTT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGTTTCGGAAAGCTCAGTaGACTGATGGAGATTCACTT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWEFRKAQ*TDGDSL
Trigger: AAGTGAATCTCCATCAGTTCACTGAGCTTTCCGAAA...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATCTTTCCGGATAGCTTaGTTGAGGGAGTATTCATCT +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRSFRIA*LREYSS
Trigger: AGATGAATACTCCCTCAATCAAGCTATCCGGAAAGA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATTTGGGGTAAAGTCATaGGAAAACCTCTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRFGVKS*ENLSAF
Trigger: GAATGCTGAGAGGTTTTCTCATGACTTTACCCCAAA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTTCCAAATGTTCTTCTaGCTGGAAGCTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKFQMFF*LEADED
Trigger: ATCCTCATCAGCTTCCAGGCAGAAGAACATTTGGAA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAAATATCACAGAAGACTaGAGCTTCAAACGTCACTCC +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRNITED*SFKRHS
Trigger: GGAGTGACGTTTGAAGCTGCAGTCTTCTGTGATATT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR GCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATCCTCCCGATGGTATTaGTTCTTGAATGTCACTGTA +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRSSRWY*FLNVTV
Trigger: TACAGTGACATTCAAGAAGCAATACCATCGGGAGGA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCAAGTGCTCACCAGCTaGCAACACAAAATAATACTG +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKQVLTS*QHKIIL
Trigger: CAGTATTATTTTGTGTTGCCAGCTGGTGAGCACTTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAGAAGTCCCTGGTTGTaGAGAGAAACGTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKRSPWL*RETFRF
Trigger: AAATCTGAACGTTTCTCTCCACAACCAGGGACTTCT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGGCAAATTAACCATTTaGGAGAAGGCTGGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRGKLTI*EKAGVR
Trigger: TCTAACTCCAGCCTTCTCCCAAATGGTTAATTTGCC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
3UTR CAA 72 bp AATATGCTCAAGGATCAAAATATGACCATGACGCTATaGCCATTCTGCTCTGTTTTCTTTCAGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: NMLKDQNMTMTL*PFCSVFFQSPC
Trigger: ACATGGAGACTGAAAGAAAACAGAGCAGAATGGCAATAGCGTCATGGTCATATTTTGATCCTTGAGCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR TCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGGAATAGATGGAAAGTaGTGTATAACCACAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKGIDGK*CITTVL
Trigger: AAGCACTGTGGTTATACATCACTTTCCATCTATTCC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTACACACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACAACATGGATaGACCTGGAAGACATTTTCA +
Preference number: 4 (lower is better)
Translates to: VHTHTMEYHSAFKRRSCHLQQHG*TWKTFS
Trigger: TGAAAATGTCTTCCAGGTTCATCCATGTTGTTGCAA...ATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGTGTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR GCA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCCATTGTGTTTTGAATaGCAGGAAGATAGACGCATT +
Preference number: 4 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKPLCFE*QEDRRI
Trigger: AATGCGTCTATCTTCCTGGCATTCAAAACACAATGG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAATAAATCTGCACAATTaGCTCATCCCAGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRINLHN*LIPEVD
Trigger: ATCTACTTCTGGGATGAGTCAATTGTGCAGATTTAT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAATAATGAAAGGTTTGTaGGGAATTCTATCAGCACTG +
Preference number: 4 (lower is better)
Translates to: VILVSFIAFMRPERNFTRIMKGL*GILSAL
Trigger: CAGTGCTGATAGAATTCCCCACAAACCTTTCATTAT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CCA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCTGCTTCTTTGTAGGTaGACATATCCAACTGAAAAT +
Preference number: 4 (lower is better)
Translates to: TNKTICNSRATGKLTIWELLLCR*TYPTEN
Trigger: ATTTTCAGTTGGATATGTCCACCTACAAAGAAGCAG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR TCA 90 bp ACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACAACAGACGCATTTTAATGTaGAGAGGAATAAGAGGATTC +
Preference number: 4 (lower is better)
Translates to: TQWNIIQLSKGDLVICNNRRILM*RGIRGF
Trigger: GAATCCTCTTATTCCTCTTCACATTAAAATGCGTCT...GTTGTTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CCA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAATCATTTGCAACAACATaGATGAACCTGGAAGACATT +
Preference number: 4 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQSFATT*MNLEDI
Trigger: AATGTCTTCCAGGTTCATCCATGTTGTTGCAAATGA...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS GCA 90 bp CTCCAAGAGCTCCAGGCTGAGCCCCCGGCACACGGGCTGACGGGGTaGCTCCCGGGTACAGGCCATCCAGAAGTGTGGTCAGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: LQELQAEPPAHGLTG*LPGTGHPEVWSDSS
Trigger: ACTGGAGTCTGACCACACTTCTGGATGGCCTGTACCCGGGAGGCACCCCGTCAGCCCGTGTGCCGGGGGCTCAGCCTGGAGCTCTTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS TCA 90 bp AGCTGGTCTGAGTGGGTCTGGCCACCTTGGTGGGGGTCTCCATCGTaGCAGTCCCAGGAAGCAGCCCCGTGGCCACATCCTCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: SWSEWVWPPWWGSPS*QSQEAAPWPHPPHS
Trigger: GCTGTGCGGAGGATGTGGCCACGGGGCTGCTTCCTGGGACTGTCACGATGGAGACCCCCACCAAGGTGGCCAGACCCACTCAGACCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp ATCACGTGGCTGATGAACCAGCCTGGGGAAGGCCCACGGCTGTCGTaGCAGAGGCGGATCTTCCTCAGCAGGCCCAGTTGGGCAGGAGCG +
Preference number: 5 (lower is better)
Translates to: ITWLMNQPGEGPRLS*QRRIFLSRPSWAGA
Trigger: CGCTCCTGCCCAACTGGGCCTGCTGAGGAAGATCCGCCTCTGGCACGACAGCCGTGGGCCTTCCCCAGGCTGGTTCATCAGCCACGTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp TCAGGGCAGCCCGTGTGCGACTCTCTCTCCTCATCCTCTGTCTGGTaGCCCTCAGCTGGGCCTTGGATGGTGGATGCGCCCAGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: SGQPVCDSLSSSSVW*PSAGPWMVDAPSAG
Trigger: ACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAGACAGAGGATGAGGAGAGAGAGTCGCACACGGGCTGCCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS CCA 90 bp CTCTCTCCTCATCCTCTGTCTGGTGCCCCTCAGCTGGGCCTTGGATaGTGGATGCGCCCAGCGCAGGTGGCGAGCTTGTTGTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LSPHPLSGAPQLGLG*WMRPAQVASLLSGS
Trigger: GCTGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAGACAGAGGATGAGGAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS GCA 90 bp CTCATCCTCTGTCTGGTGCCCCTCAGCTGGGCCTTGGATGGTGGATaGGCCCAGCGCAGGTGGCGAGCTTGTTGTCGGGCAGCCAAGACT +
Preference number: 5 (lower is better)
Translates to: LILCLVPLSWALDGG*AQRRWRACCRAAKT
Trigger: AGTCTTGGCTGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAGACAGAGGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp CCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTTGGTGTGCAGTaGAGGAGTCGAAGCAGGGATGTGCTGGGGAGCCAGCGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: PQRKQWEPRHPVGVQ*RSRSRDVLGSQRWR
Trigger: GCGCCACCGCTGGCTCCCCAGCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp GGGAAGAACCAGCCCTGTCCCGTGTGCAGCTCCTTCACCATCACGTaGCTGATGAACCAGCCTGGGGAAGGCCCACGGCTGTCGTGCCAG +
Preference number: 5 (lower is better)
Translates to: GKNQPCPVCSSFTIT*LMNQPGEGPRLSCQ
Trigger: CTGGCACGACAGCCGTGGGCCTTCCCCAGGCTGGTTCATCAGCCACGTGATGGTGAAGGAGCTGCACACGGGACAGGGCTGGTTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp TCTCCTCATCCTCTGTCTGGTGCCCCTCAGCTGGGCCTTGGATGGTaGATGCGCCCAGCGCAGGTGGCGAGCTTGTTGTCGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: SPHPLSGAPQLGLGW*MRPAQVASLLSGSQ
Trigger: TTGGCTGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAGACAGAGGATGAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS CCA 90 bp CGTGTGCGACTCTCTCTCCTCATCCTCTGTCTGGTGCCCCTCAGCTaGGCCTTGGATGGTGGATGCGCCCAGCGCAGGTGGCGAGCTTGT +
Preference number: 5 (lower is better)
Translates to: RVRLSLLILCLVPLS*ALDGGCAQRRWRAC
Trigger: ACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAGACAGAGGATGAGGAGAGAGAGTCGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS CCA 90 bp TCCCGTGTGCAGCTCCTTCACCATCACGTGGCTGATGAACCAGCCTaGGGAAGGCCCACGGCTGTCGTGCCAGAGGCGGATCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: SRVQLLHHHVADEPA*GRPTAVVPEADLPQ
Trigger: CTGAGGAAGATCCGCCTCTGGCACGACAGCCGTGGGCCTTCCCCAGGCTGGTTCATCAGCCACGTGATGGTGAAGGAGCTGCACACGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp GTGCCCCTCAGCTGGGCCTTGGATGGTGGATGCGCCCAGCGCAGGTaGCGAGCTTGTTGTCGGGCAGCCAAGACTTTTTCAACCTCGCCT +
Preference number: 5 (lower is better)
Translates to: VPLSWALDGGCAQRR*RACCRAAKTFSTSP
Trigger: AGGCGAGGTTGAAAAAGTCTTGGCTGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp CACGGGCTGACGGGGTGCCTCCCGGGTACAGGCCATCCAGAAGTGTaGTCAGACTCCAGTCCCACCAGTCAGCGATGTTTCTCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: HGLTGCLPGTGHPEV*SDSSPTSQRCFSGH
Trigger: GTGGCCTGAGAAACATCGCTGACTGGTGGGACTGGAGTCTGACCACACTTCTGGATGGCCTGTACCCGGGAGGCACCCCGTCAGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS TCA 90 bp TGCAATAGAAAAGCTTCCGGAAGCCGAGTCCCCCTTGCAGACAGGTaGGCTCCCGCTCCACGCGACCATCATGCCTGCCGGCAGACAGCC +
Preference number: 5 (lower is better)
Translates to: CNRKASGSRVPLADR*APAPRDHHACRQTA
Trigger: GGCTGTCTGCCGGCAGGCATGATGGTCGCGTGGAGCGGGAGCTCACCTGTCTGCAAGGGGGACTCGGCTTCCGGAAGCTTTTCTATTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp GCACAGACACAGCCCTGGTGCTGCGGTCAATCCACATGCTGGCCCTaGGTCGGGACAGGGCTGTGTGGGCTTCAGTCCTTGTTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: AQTQPWCCGQSTCWP*VGTGLCGLQSLFCP
Trigger: TGGGCAGAACAAGGACTGAAGCCCACACAGCCCTGTCCCGACTCAGGGCCAGCATGTGGATTGACCGCAGCACCAGGGCTGTGTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
CDS GCA 90 bp GCAGACAGCCAGCACTGGGCAGGGAAGAACCAGCCCTGTCCCGTGTaGAGCTCCTTCACCATCACGTGGCTGATGAACCAGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: ADSQHWAGKNQPCPV*SSFTITWLMNQPGE
Trigger: TTCCCCAGGCTGGTTCATCAGCCACGTGATGGTGAAGGAGCTGCACACGGGACAGGGCTGGTTCTTCCCTGCCCAGTGCTGGCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp AGAAGTGGTGCCCTGGAGCTGGAGAAGAGCAGAGAATGTGCTGTCTaGGGTCCCAGTAGCACACAGCCGCCTGTGATGGAACCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: RSGALELEKSRECAV*GPSSTQPPVMEPGA
Trigger: GGCCCCAGGTTCCATCACAGGCGGCTGTGTGCTACTGGGACCGCAGACAGCACATTCTCTGCTCTTCTCCAGCTCCAGGGCACCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp AGGATGCTGAGTAGGGGGATAGAGGATCTCAGAACCAGACTGCGATaGCGTGAAGCTGGGGGTGCGAGGAATGCCAGGCGGAAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: RMLSRGIEDLRTRLR*REAGGARNARRKAV
Trigger: CACGGCCTTCCGCCTGGCATTCCTCGCACCCCCAGCTTCACGGCATCGCAGTCTGGTTCTGAGATCCTCTATCCCCCTACTCAGCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp TTGTGCCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTTGGTGTaGAGTGGAGGAGTCGAAGCAGGGATGTGCTGGGGAGCCAGCGGT +
Preference number: 5 (lower is better)
Translates to: LCLKGNSGSRGIQLV*SGGVEAGMCWGASG
Trigger: ACCGCTGGCTCCCCAGCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp GTCATGGGCTCTGTGGGGGTTCCCCTTGGAGCTGAAGTGGCAGGTTaGCCAAGGGTCACGGGTGAAGGTTCCCGTGAGAATGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: VMGSVGVPLGAEVAG*PRVTGEGSRENGVV
Trigger: GACCACACCATTCTCACGGGAACCTTCACCCGTGACCCTTGGCCAACCTGCCACTTCAGCTCCAAGGGGAACCCCCACAGAGCCCATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp GCAGAGAATGTGCTGTCTGCGGTCCCAGTAGCACACAGCCGCCTGTaGTGGAACCTGGGGCCACCACTGCTCCAGGCCCTTGCGATTATA +
Preference number: 5 (lower is better)
Translates to: AENVLSAVPVAHSRL*WNLGPPLLQALAII
Trigger: TATAATCGCAAGGGCCTGGAGCAGTGGTGGCCCCAGGTTCCATCACAGGCGGCTGTGTGCTACTGGGACCGCAGACAGCACATTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp ACACTGAAGACGGTGTGTGCTTCCAGACCATGGTGGGGCTGCACCTaGCAGGCCATGTCCCGAGGAGCCGGGTTGACTGTCAAGTACAGC +
Preference number: 5 (lower is better)
Translates to: TLKTVCASRPWWGCT*QAMSRGAGLTVKYS
Trigger: GCTGTACTTGACAGTCAACCCGGCTCCTCGGGACATGGCCTGTCAGGTGCAGCCCCACCATGGTCTGGAAGCACACACCGTCTTCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp GAAGCGGTCCCACAAATGGCCCACACTGCAGAGCTCCACCAAGGCTaGAGGGCCCTTGACCACTGGGGCATTAGTCCCTCCAAACCACTG +
Preference number: 5 (lower is better)
Translates to: EAVPQMAHTAELHQG*RALDHWGISPSKPL
Trigger: CAGTGGTTTGGAGGGACTAATGCCCCAGTGGTCAAGGGCCCTTCAGCCTTGGTGGAGCTCTGCAGTGTGGGCCATTTGTGGGACCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp GGGTGGGCTGACTTCTCTCAGAGCGGCCAGTCATCAGGGATCCCTTaGTCTGTGGCCCTGGCTCTAGGTCTAGTGAACCTTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: GWADFSQSGQSSGIP*SVALALGLVNLPLE
Trigger: CTCCAGAGGAAGGTTCACTAGACCTAGAGCCAGGGCCACAGAGCAAGGGATCCCTGATGACTGGCCGCTCTGAGAGAAGTCAGCCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp AGCCATTGTGCCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTTaGTGTGCAGTGGAGGAGTCGAAGCAGGGATGTGCTGGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SHCASKETVGAAASS*CAVEESKQGCAGEP
Trigger: TGGCTCCCCAGCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp CAGGTTGGCCAAGGGTCACGGGTGAAGGTTCCCGTGAGAATGGTGTaGTCGTTGCATCAGGATCTGCAGTGCCAGGCTCAGTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: QVGQGSRVKVPVRMV*SLHQDLQCQAQWAA
Trigger: TGCTGCCCACTGAGCCTGGCACTGCAGATCCTGATGCAACGACCACACCATTCTCACGGGAACCTTCACCCGTGACCCTTGGCCAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp CAAGGGCAGTGTAGTTCCCATACTCCAAGGTGTGGCTCGGGAGGATaGGGGTCTGTCTGTGAGTGTCCACAGCAGCAGGGAGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: QGQCSSHTPRCGSGG*GSVCECPQQQGGRQ
Trigger: CTGTCTCCCTCCCTGCTGCTGTGGACACTCACAGACAGACCCTCATCCTCCCGAGCCACACCTTGGAGTATGGGAACTACACTGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp CATGGTGGGGCTGCACCTGACAGGCCATGTCCCGAGGAGCCGGGTTaGCTGTCAAGTACAGCTGAGCTTTACCCAGTAAGCCATGCTTCG +
Preference number: 5 (lower is better)
Translates to: HGGAAPDRPCPEEPG*LSSTAELYPVSHAS
Trigger: CGAAGCATGGCTTACTGGGTAAAGCTCAGCTGTACTTGACAGTCAACCCGGCTCCTCGGGACATGGCCTGTCAGGTGCAGCCCCACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp CTGGACAAGCTGTGCCATTGTCACTTGCCGCCTTCCTTTGGGCCCTaGCACTCCCAGAGAGAATGGCTGATGCAGGTTGCTTGCGTGGCT +
Preference number: 5 (lower is better)
Translates to: LDKLCHCHLPPSFGP*HSQREWLMQVACVA
Trigger: AGCCACGCAAGCAACCTGCATCAGCCATTCTCTCTGGGAGTGGCAGGGCCCAAAGGAAGGCGGCAAGTGACAATGGCACAGCTTGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp GAAATCCTGTCCCCAAACTGCAGGCCAAAGAAGCGGTCCCACAAATaGCCCACACTGCAGAGCTCCACCAAGGCTGAAGGGCCCTTGACC +
Preference number: 5 (lower is better)
Translates to: EILSPNCRPKKRSHK*PTLQSSTKAEGPLT
Trigger: GGTCAAGGGCCCTTCAGCCTTGGTGGAGCTCTGCAGTGTGGGCCATTTGTGGGACCGCTTCTTTGGCCTGCAGTTTGGGGACAGGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp ACCTCGACCCACAATCCACCTCCAGGAGGGCTACAGCTGCACAGATaGAGACCCCAGCTCTTGTCAGTGCTCACAGACAGCTCACCACCA +
Preference number: 5 (lower is better)
Translates to: TSTHNPPPGGLQLHR*RPQLLSVLTDSSPP
Trigger: TGGTGGTGAGCTGTCTGTGAGCACTGACAAGAGCTGGGGTCTTCATCTGTGCAGCTGTAGCCCTCCTGGAGGTGGATTGTGGGTCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp ACACCTTTGAGGTCAACCTGGCCGGAGCTCGGAAGCCAGTGTCAATaGCGACCGCATATAGCTGATGGCCCGGCAGGGAAGCTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: TPLRSTWPELGSQCQ*RPHIADGPAGKLLA
Trigger: TGCAAGAAGCTTCCCTGCCGGGCCATCAGCTATATGCGGTCGTCATTGACACTGGCTTCCGAGCTCCGGCCAGGTTGACCTCAAAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp CAGGAGGGCTACAGCTGCACAGATGAAGACCCCAGCTCTTGTCAGTaGTCACAGACAGCTCACCACCAAAGGAAAGGCAGCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QEGYSCTDEDPSSCQ*SQTAHHQRKGSRQP
Trigger: AGGCTGCCTGCTGCCTTTCCTTTGGTGGTGAGCTGTCTGTGAGCACTGACAAGAGCTGGGGTCTTCATCTGTGCAGCTGTAGCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp TGCCAGGCTCAGTGGGCAGCAGGTTTAACTGTGATGACTCTGAAATaGCACCGAGTCCCAGCGAGCCAAGCAGCCCCACTACTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CQAQWAAGLTVMTLK*HRVPASQAAPLLCR
Trigger: TCTGCAGAGTAGTGGGGCTGCTTGGCTCGCTGGGACTCGGTGCCATTTCAGAGTCATCACAGTTAAACCTGCTGCCCACTGAGCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp TTAGGGGCTGGACAAGCTGTGCCATTGTCACTTGCCGCCTTCCTTTaGGCCCTGCCACTCCCAGAGAGAATGGCTGATGCAGGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: LGAGQAVPLSLAAFL*ALPLPERMADAGCL
Trigger: CAAGCAACCTGCATCAGCCATTCTCTCTGGGAGTGGCAGGGCCCAAAGGAAGGCGGCAAGTGACAATGGCACAGCTTGTCCAGCCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp CAGCAGGCAGCCTGGAGACACCTTTCCTGGTCATCAGAAATGTTCTaGGCTGCCTCCTCGGCCATGTCCTGTGCAAGCTGGTCACAAGTA +
Preference number: 5 (lower is better)
Translates to: QQAAWRHLSWSSEMF*AASSAMSCASWSQV
Trigger: TACTTGTGACCAGCTTGCACAGGACATGGCCGAGGAGGCAGCCCAGAACATTTCTGATGACCAGGAAAGGTGTCTCCAGGCTGCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCAAGTGGGGCTGCTCTaGCCCTCCAGCAGCAACCAG +
Preference number: 5 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLQVGLL*PSSSNQ
Trigger: CTGGTTGCTGCTGGAGGGCAAGAGCAGCCCCACTTG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGCCCCTCAGCTGGGCCTaGGATGGTGGATGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWPLSWA*DGGCAQ
Trigger: CTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGG...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp CAACCACGGAGAGCTCCAGCCAGTTCCTTGGCTTTCGCCAGTAGCTaGGGACGCCCTTGTCCATCATACGGTAGAGTTGAACACAGAGGT +
Preference number: 5 (lower is better)
Translates to: QPRRAPASSLAFASS*GRPCPSYGRVEHRG
Trigger: ACCTCTGTGTTCAACTCTACCGTATGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAGCCAAGGAACTGGCTGGAGCTCTCCGTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS GCA 90 bp ATTGCTCCTGGCCAAACCTGTAGGCTAGAAATCCTGTCCCCAAACTaGAGGCCAAAGAAGCGGTCCCACAAATGGCCCACACTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: IAPGQTCRLEILSPN*RPKKRSHKWPTLQS
Trigger: GCTCTGCAGTGTGGGCCATTTGTGGGACCGCTTCTTTGGCCTGCAGTTTGGGGACAGGATTTCTAGCCTACAGGTTTGGCCAGGAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp GGGCAGCCAAGACTTTTTCAACCTCGCCTGCACAGTCAGGAATACTaGAGCTTGAAGAGAAGGGGAGGCGAGTCCAGGAACGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GQPRLFQPRLHSQEY*SLKRRGGESRNVLP
Trigger: TGGCAGAACGTTCCTGGACTCGCCTCCCCTTCTCTTCAAGCTGCAGTATTCCTGACTGTGCAGGCGAGGTTGAAAAAGTCTTGGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp TGTAATAGGCTTCAAAATCAGAGAGGTGAGGGTCAGGGCTGTGGGTaGGCTGACTTCTCTCAGAGCGGCCAGTCATCAGGGATCCCTTGC +
Preference number: 5 (lower is better)
Translates to: CNRLQNQRGEGQGCG*ADFSQSGQSSGIPC
Trigger: GCAAGGGATCCCTGATGACTGGCCGCTCTGAGAGAAGTCAGCCCACCCACAGCCCTGACCCTCACCTCTCTGATTTTGAAGCCTATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp AGGGAGGATCTCCACTCTCAGGGACACGCTGGTGAAGAGTTGGGTTaGAGGGTTATAGAGAGTGAAGTGCACAGACACAGCCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: REDLHSQGHAGEELG*RVIESEVHRHSPGA
Trigger: AGCACCAGGGCTGTGTCTGTGCACTTCACTCTCTATAACCCTCCAACCCAACTCTTCACCAGCGTGTCCCTGAGAGTGGAGATCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
ENST00000648482.1
CDS-3UTR CAA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCTGTGCCATTGTCACTaGCCGCCTTCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLLCHCH*PPSFGP
Trigger: GGGCCCAAAGGAAGGCGGCAAGTGACAATGGCACAG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp CACTGGAGACCCTCAGCATCACAAGGAACTGATCATAGCTGTCACTaGGCCATTGTGCCTCAAAGGAAACAGTGGGAGCCGCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: HWRPSASQGTDHSCH*AIVPQRKQWEPRHP
Trigger: TGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAATGGCTCAGTGACAGCTATGATCAGTTCCTTGTGATGCTGAGGGTCTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp CAAGAGAGGCTACCTCCAGCCAGTTCCTTGGCTTTCGCCAGTAGCTaGGGACGCCCTTGTCCATCATACGGTAGAGTTGAACACAGAGGT +
Preference number: 5 (lower is better)
Translates to: QERLPPASSLAFASS*GRPCPSYGRVEHRG
Trigger: ACCTCTGTGTTCAACTCTACCGTATGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAGCCAAGGAACTGGCTGGAGGTAGCCTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433506.1
ENST00000462350.1
ENST00000483616.1
CDS GCA 90 bp CCTCAGCATCACAAGGAACTGATCATAGCTGTCACTGAGCCATTGTaGCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PQHHKELIIAVTEPL*LKGNSGSRGIQLVC
Trigger: GCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAATGGCTCAGTGACAGCTATGATCAGTTCCTTGTGATGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp CTGGTTAGTGACATCTCCAGCAAGAGTAACAAGGTGGCCGGAAACTaGATAGTAGGTGAGGCTCACTCCAACCACGGAGAGCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LVSDISSKSNKVAGN*IVGEAHSNHGELQP
Trigger: TGGCTGGAGCTCTCCGTGGTTGGAGTGAGCCTCACCTACTATGCAGTTTCCGGCCACCTTGTTACTCTTGCTGGAGATGTCACTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGTGGGTCTGGCCACCTaGGTGGGGGTCTCCATCGTG +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAVGLAT*VGVSIV
Trigger: CACGATGGAGACCCCCACCAAGGTGGCCAGACCCAC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAGCCGCGGCATCCAGTaGGTGTGCAGTGGAGGAGTC +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSASRGIQ*VCSGGV
Trigger: GACTCCTCCACTGCACACCAACTGGATGCCGCGGCT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGACTTGCCGCCTTCCTTaGGGCCCTGCCACTCCCAGA +
Preference number: 5 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWTCRLP*GPATPR
Trigger: TCTGGGAGTGGCAGGGCCCAAAGGAAGGCGGCAAGT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp TCCCCGAAATCCATCATCAGACAGAGAGCCTCTCCAGAAGCCATATaGACACGGAATCCCAGATTTGGAGGTGCCCGAGCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SPKSIIRQRASPEAI*TRNPRFGGARASTS
Trigger: GGAAGTGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGTGTTCATATGGCTTCTGGAGAGGCTCTCTGTCTGATGATGGATTTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp GAAGTTGATCCAGCACTCAAAGGCCACACTGGCATTTACCAGAGCTaGGGAGGGGGACGTGAGCCGATTGGCCACAATTTTCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: EVDPALKGHTGIYQS*GGGREPIGHNFLLH
Trigger: GTGCAGAAGAAAATTGTGGCCAATCGGCTCACGTCCCCCTCCTCAGCTCTGGTAAATGCCAGTGTGGCCTTTGAGTGCTGGATCAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp CAGCCGCCTGTGATGGAACCTGGGGCCACCACTGCTCCAGGCCCTTaGGATTATAATGAAAGGTTTGTGGGGAATTCTATCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: QPPVMEPGATTAPGP*DYNERFVGNSISTV
Trigger: AACAGTGCTGATAGAATTCCCCACAAACCTTTCATTATAATCGCAAGGGCCTGGAGCAGTGGTGGCCCCAGGTTCCATCACAGGCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp TTCTTCACCAGGGGTGGCTGGCAGGGCTCGCACACGATGAAAAGTTaGTGTCTTAGAGTGGAGGCACTGACATTATTGAAGGCAAGGACC +
Preference number: 5 (lower is better)
Translates to: FFTRGGWQGSHTMKS*CLRVEALTLLKART
Trigger: GGTCCTTGCCTTCAATAATGTCAGTGCCTCCACTCTAAGACAGCAACTTTTCATCGTGTGCGAGCCCTGCCAGCCACCCCTGGTGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp AGAATGGTGTGGTCGTTGCATCAGGATCTGCAGTGCCAGGCTCAGTaGGCAGCAGGTTTAACTGTGATGACTCTGAAATGGCACCGAGTC +
Preference number: 5 (lower is better)
Translates to: RMVWSLHQDLQCQAQ*AAGLTVMTLKWHRV
Trigger: GACTCGGTGCCATTTCAGAGTCATCACAGTTAAACCTGCTGCCCACTGAGCCTGGCACTGCAGATCCTGATGCAACGACCACACCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp CCACCAGCCCTGCTACAAAGATGCTGGGGAGTGAGTGGCGCATCATaGAGGAGCAGGATGCCATTGTGTTTTGAATGCCAGGAAGATAGA +
Preference number: 5 (lower is better)
Translates to: PPALLQRCWGVSGAS*RSRMPLCFECQEDR
Trigger: TCTATCTTCCTGGCATTCAAAACACAATGGCATCCTGCTCCTCCATGATGCGCCACTCACTCCCCAGCATCTTTGTAGCAGGGCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACGACCCAGCAGGGCCTaGGGCCAGTCAATCATGAGG +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYARPSRA*GQSIMR
Trigger: CCTCATGATTGACTGGCCCAAGGCCCTGCTGGGTCG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp AAGGTTCCCGTGAGAATGGTGTGGTCGTTGCATCAGGATCTGCAGTaGCAGGCTCAGTGGGCAGCAGGTTTAACTGTGATGACTCTGAAA +
Preference number: 5 (lower is better)
Translates to: KVPVRMVWSLHQDLQ*QAQWAAGLTVMTLK
Trigger: TTTCAGAGTCATCACAGTTAAACCTGCTGCCCACTGAGCCTGGCACTGCAGATCCTGATGCAACGACCACACCATTCTCACGGGAACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp ACAGAGAGCCTCTCCAGAAGCCATATGAACACGGAATCCCAGATTTaGAGGTGCCCGAGCTTCCACTTCCAGGGAGCAATTAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: TESLSRSHMNTESQI*RCPSFHFQGAIKNR
Trigger: CCTGTTCTTAATTGCTCCCTGGAAGTGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGTGTTCATATGGCTTCTGGAGAGGCTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCGAAGCCACAGACACTaGCAGGACGTACGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSARSHRH*QDVRLS
Trigger: GGAGAGACGTACGTCCTGCAAGTGTCTGTGGCTTCG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCTTAGCCATTGCCTGTaGATGGGTCTTCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLLSHCL*MGLLLE
Trigger: CTCCAGCAGAAGACCCATCAACAGGCAATGGCTAAG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 90 bp AGCCTCTCCAGAAGCCATATGAACACGGAATCCCAGATTTGGAGGTaGCCGAGCTTCCACTTCCAGGGAGCAATTAAGAACAGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: SLSRSHMNTESQIWR*PSFHFQGAIKNRVH
Trigger: ATGAACCCTGTTCTTAATTGCTCCCTGGAAGTGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGTGTTCATATGGCTTCTGGAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp TTTCTGGGTGGCTCTGTAGCTTGGAAATGTCACTCACTTCAAAACTaGCCTTCAGCTTTCTCCTTAGGAGAGCGAATGCCGCGAGGCGAT +
Preference number: 5 (lower is better)
Translates to: FLGGSVAWKCHSLQN*PSAFSLGERMPRGD
Trigger: ATCGCCTCGCGGCATTCGCTCTCCTAAGGAGAAAGCTGAAGGCCAGTTTTGAAGTGAGTGACATTTCCAAGCTACAGAGCCACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGGCTCCTCAGAAGTCCTaGATGTCTGCTGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWAPQKS*MSAGSA
Trigger: TGCTGAGCCAGCAGACATCAAGGACTTCTGAGGAGC...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp CAGCAAAGACAAGCACTTCATCTTCATGGACACTGCTGGAGTTCATaGACGCAGACACGGCCTCATGGCCAATCTCCACATAATAAGGCC +
Preference number: 5 (lower is better)
Translates to: QQRQALHLHGHCWSS*TQTRPHGQSPHNKA
Trigger: GGCCTTATTATGTGGAGATTGGCCATGAGGCCGTGTCTGCGTTCATGAACTCCAGCAGTGTCCATGAAGATGAAGTGCTTGTCTTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp GATGCCATAAGGGTGAGGTCCATAAATGCTCGGCAAAGTCCTCTGTaGAACTGGTTAGTGACATCTCCAGCAAGAGTAACAAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: DAIRVRSINARQSPL*NWLVTSPARVTRWP
Trigger: CGGCCACCTTGTTACTCTTGCTGGAGATGTCACTAACCAGTTTCACAGAGGACTTTGCCGAGCATTTATGGACCTCACCCTTATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGTCATCAGGGATCCCTaGCTCTGTGGCCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGVIRDP*LCGPGS
Trigger: AGAGCCAGGGCCACAGAGCAAGGGATCCCTGATGAC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCGGCAGGGAAGCTTCTaGCAGAAAGATGTAACCAGC +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSARQGSF*QKDVTS
Trigger: GCTGGTTACATCTTTCTGCAAGAAGCTTCCCTGCCG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGCTGATGCAGGTTGCTaGCGTGGCTCCTGTGCGTCT +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGADAGC*RGSCAS
Trigger: AGACGCACAGGAGCCACGCAAGCAACCTGCATCAGC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCAGGAGCAGGATGCCATaGTGTTTTGAATGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLRSRMP*CFECQE
Trigger: TTCCTGGCATTCAAAACACAATGGCATCCTGCTCCT...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGGCTGTCACTGAGCCATaGTGCCTCAAAGGAAACAGT +
Preference number: 5 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWAVTEP*CLKGNS
Trigger: ACTGTTTCCTTTGAGGCACAATGGCTCAGTGACAGC...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCCTCAGAGAGTATGGCTaGATTGTCACTGTCTGTTCT +
Preference number: 5 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLLREYG*IVTVCS
Trigger: AGAACAGACAGTGACAATCAAGCCATACTCTCTGAG...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGGGGTGGCTCTGTAGCTaGGAAATGTCACTCACTTCA +
Preference number: 5 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWGWLCS*EMSLTS
Trigger: TGAAGTGAGTGACATTTCCAAGCTACAGAGCCACCC...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAAACAATGTACACCTTaGAGGTCAACCTGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAKQCTP*RSTWPE
Trigger: CTCCGGCCAGGTTGACCTCAAAGGTGTACATTGTTT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGAAGCCGAGTCCCCCTaGCAGACAGGTGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWEEAESP*QTGELP
Trigger: CGGGAGCTCACCTGTCTGCAAGGGGGACTCGGCTTC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGACCCCGGGGCTTCCTaGCTGAGCCTGAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VILVSFIAFMRPERNFTRDPGAS*LSLKSR
Trigger: CCTGCTCTTCAGGCTCAGCAAGGAAGCCCCGGGGTC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACAGGTGGCGAGCTTGTaGTCGGGCAGCCAAGACTTT +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGQVASL*SGSQDF
Trigger: AAAGTCTTGGCTGCCCGACAACAAGCTCGCCACCTG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAGCGCAGGTGGCGAGCTaGTTGTCGGGCAGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: VILVSFIAFMRPERNFTRAQVAS*LSGSQD
Trigger: GTCTTGGCTGCCCGACAACAAGCTCGCCACCTGCGC...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTGCTGGCTCAGCAGCTaGGTAACTAGAAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSACWLSS*VTRNVH
Trigger: GTGGACATTTCTAGTTACCAAGCTGCTGAGCCAGCA...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp AGCATAACTTCCAGGAACCACACTGGATGCCTGAAACTGTGGCTAGCACCAACCATGACCATGACGCTATaGCCATTCTGCTCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SITSRNHTGCLKLWLAPTMTMTL*PFCSVF
Trigger: GAAAACAGAGCAGAATGGCAATAGCGTCATGGTCAT...GGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTGGTTCCTGGAAGTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCTGGCTGTCACCCACTaGAGTCTGAGAAATAAAGGA +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSALAVTH*SLRNKG
Trigger: TCCTTTATTTCTCAGACTCAAGTGGGTGACAGCCAG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGGGGACGTGAGCCGATaGGCCACAATTTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGGDVSR*ATIFFC
Trigger: GCAGAAGAAAATTGTGGCCAATCGGCTCACGTCCCC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGGACAAGCTGTGCCATaGTCACTTGCCGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGGQAVP*SLAAFL
Trigger: AAGGAAGGCGGCAAGTGACAATGGCACAGCTTGTCC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGACAGCCACTGCACACATaGCTCCTGGCCAAACCTGTA +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGQPLHT*LLAKPV
Trigger: TACAGGTTTGGCCAGGAGCAATGTGTGCAGTGGCTG...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCCATACAAACTATGTTTAGGAGCAGGATGCCATaGTGTTTTGAATGCCAGGAA +
Preference number: 5 (lower is better)
Translates to: HTGCLKLWLAPTPIQTMFRSRMP*CFECQE
Trigger: TTCCTGGCATTCAAAACACAATGGCATCCTGCTCCT...AAACATAGTTTGTATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCAGCCTCTTCCAACTTaGGTGTTTCCAGTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAQPLPT*VFPVSE
Trigger: TTCTGAGACTGGAAACACCAAAGTTGGAAGAGGCTG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCGGATGTCTGCTAAAATaGGCTGTTGGGTGGGTTAAG +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAGCLLK*AVGWVK
Trigger: CTTAACCCACCCAACAGCCAATTTTAGCAGACATCC...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp TGGAATTCCTTTCAAACAGGGGCTTCTCTGGACAGGAGAGCTCCTTaGTTTCTGACAGTCCATTGTCGCCACATAAAACAATGTACACCT +
Preference number: 5 (lower is better)
Translates to: WNSFQTGASLDRRAP*FLTVHCRHIKQCTP
Trigger: AGGTGTACATTGTTTTATGTGGCGACAATGGACTGTCAGAAACCAAGGAGCTCTCCTGTCCAGAGAAGCCCCTGTTTGAAAGGAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CAGCTCTTCTCACCTGCAAAACTAGGATGTCTGCTAAAATTGGCTGTTGGGTGGATTGCCTCAGACATGTaGTGTAGCCTCATTTCAACC +
Preference number: 5 (lower is better)
Translates to: QLFSPAKLGCLLKLAVGWIASDM*CSLIST
Trigger: GGTTGAAATGAGGCTACACAACATGTCTGAGGCAAT...CCACCCAACAGCCAATTTTAGCAGACATCCTAGTTTTGCAGGTGAGAAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAAGGCAGTCACCGCCATaGCCTCAGACATGTTGTGTA +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGRQSPP*PQTCCV
Trigger: TACACAACATGTCTGAGGCAATGGCGGTGACTGCCT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCACATCACACGATACCATaGGGGGATGCTGAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAHHTIP*GDAESF
Trigger: AAAAGACTCAGCATCCCCCAATGGTATCGTGTGATG...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAACACTGCTCATCCTGTaGGAAGCCTTAACCATCACA +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYATLLIL*EALTIT
Trigger: TGTGATGGTTAAGGCTTCCAACAGGATGAGCAGTGT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAAGAATGGTGTGGTCGTaGCATCAGGATCTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGRMVWS*HQDLQC
Trigger: GCACTGCAGATCCTGATGCAACGACCACACCATTCT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGCTGTGGGGGTTCCCCTaGGAGCTGAAGTGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWELWGFP*ELKWQV
Trigger: AACCTGCCACTTCAGCTCCAAGGGGAACCCCCACAG...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTGGTACAAAGTGTGTTaGGAGGTGTTTCCTATCTGG +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSAWYKVC*EVFPIW
Trigger: CCAGATAGGAAACACCTCCAAACACACTTTGTACCA...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGTGCACGGCTGGACCTaGGAGCCTTTGCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKVHGWT*EPLPSV
Trigger: CACAGATGGCAAAGGCTCCAAGGTCCAGCCGTGCAC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCACGGAATCCCAGATTaGGAGGTGCCCGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKHGIPD*EVPELP
Trigger: TGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCCGATGGTATTGCTTCTaGAATGTCACTGTAATAGGC +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSARWYCF*NVTVIG
Trigger: GCCTATTACAGTGACATTCAAGAAGCAATACCATCG...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGGATATGGGTTCTTCTaGAAGAGTATGAGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAGYGFF*KSMSWL
Trigger: TAGCCAGCTCATACTCTTCAAGAAGAACCCATATCC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGGTACCAGGCTCGCCCTTGTAACAGGTTaGGAAAATTCAATTTCTATC +
Preference number: 5 (lower is better)
Translates to: LGGLSKTGSIVPMQGTRLALVTG*ENSISI
Trigger: GATAGAAATTGAATTTTCCAAACCTGTTACAAGGGC...GAGCCTGGTACCTTGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGATTTCCACTCTCTCTaGTCCCAAAACAGGCATCGG +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGDFHSL*SQNRHR
Trigger: CCGATGCCTGTTTTGGGACAAGAGAGAGTGGAAATC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGAAGGGCCCTaGACCACTGGGGCATTAGTC +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWEKAEGP*TTGALV
Trigger: GACTAATGCCCCAGTGGTCAAGGGCCCTTCAGCCTT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp TGTCTGCTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCAGGGGTATTGTTTCCTaGGTAACAGCTGTAAATGTA +
Preference number: 5 (lower is better)
Translates to: CLLKLAVGWVKQNRVHSARGIVS*VTAVNV
Trigger: TACATTTACAGCTGTTACCAAGGAAACAATACCCCT...GGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAGGTGTAAGAAAGACCTaGGGAAATATCACAGAAGAC +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAGVRKT*GNITED
Trigger: GTCTTCTGTGATATTTCCCAAGGTCTTTCTTACACC...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCAAGTTCGTCATTCCAGTaGACGAAGGTGTCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYASSSFQ*TKVSLK
Trigger: CTTTAAAGACACCTTCGTCAACTGGAATGACGAACT...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAATCTGCCCAGGAGCTaGGCTCCCTGGATATGGGTT +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKNLPRS*APWIWV
Trigger: AACCCATATCCAGGGAGCCAAGCTCCTGGGCAGATT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCAGGAATACTGCAGCTaGAAGAGAAGGGGAGGCGAG +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKQEYCS*KRRGGE
Trigger: CTCGCCTCCCCTTCTCTTCAAGCTGCAGTATTCCTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAAATGGCCTGGGAGGCTaGCATAAATGCCTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGNGLGG*HKCLGK
Trigger: TTTTCCTAGGCATTTATGCAAGCCTCCCAGGCCATT...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 90 bp TTCAGTGGAAACCATGACTTTGTAATTGTCCAAGTGCTCACCAGCTaGCAACACAAAATAATACTGGGTGTCTCTCCCATGGTACAAAGT +
Preference number: 5 (lower is better)
Translates to: FSGNHDFVIVQVLTS*QHKIILGVSPMVQS
Trigger: ACTTTGTACCATGGGAGAGACACCCAGTATTATTTTGTGTTGCCAGCTGGTGAGCACTTGGACAATTACAAAGTCATGGTTTCCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGACATCTGTGCCGAAGTaGATCCAGCACTCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWETSVPK*IQHSKA
Trigger: GGCCTTTGAGTGCTGGATCAACTTCGGCACAGATGT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGACACGCTGGTGAAGAGTaGGGTTGGAGGGTTATAGAG +
Preference number: 5 (lower is better)
Translates to: VILVSFIAFMRPERNFTRHAGEE*GWRVIE
Trigger: CTCTATAACCCTCCAACCCAACTCTTCACCAGCGTG...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CACACTGGATGCCTGAAACTGTGGCTAGCACCAACCCCCATACAAACTATGTTTTTTCAAAAGGAGATCTaGTCATTTGCAACAACATGG +
Preference number: 5 (lower is better)
Translates to: HTGCLKLWLAPTPIQTMFFQKEI*SFATTW
Trigger: CCATGTTGTTGCAAATGACAAGATCTCCTTTTGAAA...AAACATAGTTTGTATGGGGGTTGGTGCTAGCCACAGTTTCAGGCATCCAGTGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS TCA 90 bp ACTGGCATCTTTCTGAGAAGCAGCAGGTATATAAATCTGCACAATTaGCTCATCCCAGAAGTAGATCTGCTTCACAAGAAAATCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TGIFLRSSRYINLHN*LIPEVDLLHKKIRG
Trigger: CCCTCTGATTTTCTTGTGAAGCAGATCTACTTCTGGGATGAGTCAATTGTGCAGATTTATATACCTGCTGCTTCTCAGAAAGATGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCATTCTTTTCTGTTGCATaGACTAAAAAGAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAFFSVA*TKKRSQ
Trigger: CTGGGATCTCTTTTTAGTCAATGCAACAGAAAAGAA...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGAATTCGTGACCATTGGTaGCAGGAGGCAGTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: VILVSFIAFMRPERNFTRIRDHW*QEAVLS
Trigger: GGACAAAACTGCCTCCTGCAACCAATGGTCACGAAT...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATCAAGCCTCACTCCTTaGTCAATCACAAATGGCCCC +
Preference number: 5 (lower is better)
Translates to: VILVSFIAFMRPERNFTRSSLTP*SITNGP
Trigger: GGGGCCATTTGTGATTGACAAAGGAGTGAGGCTTGA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCTCCTTCGAGTTTTCTaGCTCAGAGACTTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKLLRVF*LRDFPD
Trigger: GTCTGGGAAGTCTCTGAGCAAGAAAACTCGAAGGAG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTAAAATTGGCTGTTGGGTGGGTTAAGCAAAACAGGGTCCATAGTGCCTATGCATATAAATCTGCACAATaGACTCATCCCAGAAGTAGA +
Preference number: 5 (lower is better)
Translates to: LKLAVGWVKQNRVHSAYAYKSAQ*THPRSR
Trigger: TCTACTTCTGGGATGAGTCAATTGTGCAGATTTATA...TGCATAGGCACTATGGACCCTGTTTTGCTTAACCCACCCAACAGCCAATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGAGGAGAAGTCCCTGGTaGTGGAGAGAAACGTTCAGA +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKRRSPW*WRETFR
Trigger: TCTGAACGTTTCTCTCCACAACCAGGGACTTCTCCT...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACACGCTGGTGAAGAGTaGGGTTGGAGGGTTATAGAG +
Preference number: 5 (lower is better)
Translates to: THTMEYHSAFKRRSCHLQHAGEE*GWRVIE
Trigger: CTCTATAACCCTCCAACCCAACTCTTCACCAGCGTG...TTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CAA 90 bp CATTCTGCTCTGTTTTCTTTCAGTCTCCATGTAAATGCTTTGTACAATAGTCCCCAGCCTCTTCCAACTTaGGTGTTTCCAGTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: HSALFSFSLHVNALYNSPQPLPT*VFPVSE
Trigger: TTCTGAGACTGGAAACACCAAAGTTGGAAGAGGCTG...GGGACTATTGTACAAAGCATTTACATGGAGACTGAAAGAAAACAGAGCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS TCA 90 bp CTGGCTGTCACCCACTTGAGTCTGAGAAATAAAGGACACGTTATATaGAGGAATAGATGGAAAGTGATGTATAACCACAGTGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LAVTHLSLRNKGHVI*RNRWKVMYNHSAFL
Trigger: CAGAAAAGCACTGTGGTTATACATCACTTTCCATCTATTCCTTCATATAACGTGTCCTTTATTTCTCAGACTCAAGTGGGTGACAGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp CAATTTCTATCTGTAGAGATTCCTGGGGGTTTTCGGAAAGCTCAGTaGACTGATGGAGATTCACTTTATCCCGAAGTAATACAAATGTCG +
Preference number: 5 (lower is better)
Translates to: QFLSVEIPGGFRKAQ*TDGDSLYPEVIQMS
Trigger: CGACATTTGTATTACTTCGGGATAAAGTGAATCTCCATCAGTTCACTGAGCTTTCCGAAAACCCCCAGGAATCTCTACAGATAGAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATTGCAGGAGGCAGTTTaGTCCTCCTTAGACAAACGA +
Preference number: 5 (lower is better)
Translates to: VILVSFIAFMRPERNFTRLQEAV*SSLDKR
Trigger: TCGTTTGTCTAAGGAGGACAAAACTGCCTCCTGCAA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGATTCAGGGTCACGTTTaGGTTCTCTGGGTCTATCAG +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWEIQGHV*VLWVYQ
Trigger: CTGATAGACCCAGAGAACCAAAACGTGACCCTGAAT...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGTAGACAGAGACGGATaGCATCTTATACCAGACAGT +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKVDRDG*HLIPDS
Trigger: ACTGTCTGGTATAAGATGCAATCCGTCTCTGTCTAC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGTCCTCACACATAGCTaGAAGAGAGAGTTCGTCATT +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKVLTHS*KREFVI
Trigger: AATGACGAACTCTCTCTTCAAGCTATGTGTGAGGAC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGGATGCCATTGTGTTTaGAATGCCAGGAAGATAGAC +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWEGCHCV*NARKID
Trigger: GTCTATCTTCCTGGCATTCAAAACACAATGGCATCC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACACACACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCGGATGCCATTGTGTTTaGAATGCCAGGAAGATAGAC +
Preference number: 5 (lower is better)
Translates to: THTQWNIIQLSKGDLVICGCHCV*NARKID
Trigger: GTCTATCTTCCTGGCATTCAAAACACAATGGCATCC...GCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS-3UTR CAA 90 bp ACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGAAGGCTGGAGTTCGTCTAACAGATTaGCAAATTCATCCAAGTAGT +
Preference number: 5 (lower is better)
Translates to: TICNSRATGKLTIWEKAGVRLTD*QIHPSS
Trigger: ACTACTTGGATGAATTTGCAAATCTGTTAGACGAAC...TCCAGCCTTCTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 90 bp GCTGAAATTCGTGTGGTACATGACGGTAACTGTAACAACACTAAATaGTACCTGATCTCAAATGCTGTTTTGAGATTAACACTACAGAGG +
Preference number: 5 (lower is better)
Translates to: AEIRVVHDGNCNNTK*YLISNAVLRLTLQR
Trigger: CCTCTGTAGTGTTAATCTCAAAACAGCATTTGAGATCAGGTATCATTTAGTGTTGTTACAGTTACCGTCATGTACCACACGAATTTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483616.1
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGCAAACACAGTTCCATTaGTGTAGACAGAGACGGATT +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKQTQFH*CRQRRI
Trigger: AATCCGTCTCTGTCTACACAAATGGAACTGTGTTTG...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGGTTTCTGACAGTCCATaGTCGCCACATAAAACAATG +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWEVSDSP*SPHKTM
Trigger: CATTGTTTTATGTGGCGACAATGGACTGTCAGAAAC...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGTTCTTTCCGGATAGCTaGATTGAGGGAGTATTCATC +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKFFPDS*IEGVFI
Trigger: GATGAATACTCCCTCAATCAAGCTATCCGGAAAGAA...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp CTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATACAAGGAGGGAGTATTCATCTaGGGAAAATCTCCCATATAT +
Preference number: 5 (lower is better)
Translates to: LVSFIAFMRPERNFTRYKEGVFI*GKSPIY
Trigger: ATATATGGGAGATTTTCCCAAGATGAATACTCCCTC...CTTGTATCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp GTTATCCTGGTCTCTTTCATCGCTTTTATGAGACCTGAAAGAAATTTCACAAGATTCATGATGATCTACTaGTCTACTTTTAGCGACCAA +
Preference number: 5 (lower is better)
Translates to: VILVSFIAFMRPERNFTRFMMIY*STFSDQ
Trigger: TTGGTCGCTAAAAGTAGACAAGTAGATCATCATGAA...TCTTGTGAAATTTCTTTCAGGTCTCATAAAAGCGATGAAAGAGACCAGGATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACAAATAAGACAATATGTAACTCTAGGGCAACTGGCAAATTAACCATTTGGGAGTGGTTTCCCATTTACTaGTTACGTGAACTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: TNKTICNSRATGKLTIWEWFPIY*LRELEK
Trigger: TTTTTCCAGTTCACGTAACAAGTAAATGGGAAACCA...CTCCCAAATGGTTAATTTGCCAGTTGCCCTAGAGTTACATATTGTCTTATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS-3UTR CAA 90 bp ACACAATGGAATATCATTCAGCTTTCAAAAGGAGATCTTGTCATTTGCAACAACGTTCGTCTAACAGATTaGCAAATTCATCCAAGTAGT +
Preference number: 5 (lower is better)
Translates to: TQWNIIQLSKGDLVICNNVRLTD*QIHPSS
Trigger: ACTACTTGGATGAATTTGCAAATCTGTTAGACGAAC...GTTGTTGCAAATGACAAGATCTCCTTTTGAAAGCTGAATGATATTCCATTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648482.1
CDS TCA 72 bp TCCAAGAGCTCCAGGCTGAGCCCCCGGCACACGGGCTaGCGGGGTGCCTCCCGGGTACAGGCCATCCAGAAG +
Preference number: 6 (lower is better)
Translates to: SKSSRLSPRHTG*RGASRVQAIQK
Trigger: CTTCTGGATGGCCTGTACCCGGGAGGCACCCCGTCAGCCCGTGTGCCGGGGGCTCAGCCTGGAGCTCTTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS GCA 72 bp CTCCAGGCTGAGCCCCCGGCACACGGGCTGACGGGGTaGCTCCCGGGTACAGGCCATCCAGAAGTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: LQAEPPAHGLTG*LPGTGHPEVWS
Trigger: TGACCACACTTCTGGATGGCCTGTACCCGGGAGGCACCCCGTCAGCCCGTGTGCCGGGGGCTCAGCCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS TCA 72 bp GACACGCGTAGACGCACAGCAGGGAGAAGGACACGGTaGGGCGCGGCGTGTGCAGGTAGCGGCTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: DTRRRTAGRRTR*GAACAGSGWRR
Trigger: CCTCCTCCAGCCGCTACCTGCACACGCCGCGCCTCACCGTGTCCTTCTCCCTGCTGTGCGTCTACGCGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CCTCTGTCTGGTGCCCCTCAGCTGGGCCTTGGATGGTaGATGCGCCCAGCGCAGGTGGCGAGCTTGTTGTCG +
Preference number: 6 (lower is better)
Translates to: PLSGAPQLGLGW*MRPAQVASLLS
Trigger: CGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAGACAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS TCA 72 bp GTGCTGTCTGCGGTCCCAGTAGCACACAGCCGCCTGTaGTGGAACCTGGGGCCACCACTGCTCCAGGCCCTT +
Preference number: 6 (lower is better)
Translates to: VLSAVPVAHSRL*WNLGPPLLQAL
Trigger: AAGGGCCTGGAGCAGTGGTGGCCCCAGGTTCCATCACAGGCGGCTGTGTGCTACTGGGACCGCAGACAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp GAAATCGGCCACAGGGGCACTCGCTGGGAGCTGGTCTaGGTGGGTCTGGCCACCTTGGTGGGGGTCTCCATC +
Preference number: 6 (lower is better)
Translates to: EIGHRGTRWELV*VGLATLVGVSI
Trigger: GATGGAGACCCCCACCAAGGTGGCCAGACCCACTCAGACCAGCTCCCAGCGAGTGCCCCTGTGGCCGATTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CTGCTCGACCCAGCAGGGCCTTGGGCCAGTCAATCATaGGGACAGGCTCGGCTCTGCCTGCAGACAGGGAGG +
Preference number: 6 (lower is better)
Translates to: LLDPAGPWASQS*GQARLCLQTGR
Trigger: CCTCCCTGTCTGCAGGCAGAGCCGAGCCTGTCCTCATGATTGACTGGCCCAAGGCCCTGCTGGGTCGAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp AAAGCTTCCGGAAGCCGAGTCCCCCTTGCAGACAGGTaGGCTCCCGCTCCACGCGACCATCATGCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: KASGSRVPLADR*APAPRDHHACR
Trigger: CCGGCAGGCATGATGGTCGCGTGGAGCGGGAGCTCACCTGTCTGCAAGGGGGACTCGGCTTCCGGAAGCTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CAGCCCTGTCCCGTGTGCAGCTCCTTCACCATCACGTaGCTGATGAACCAGCCTGGGGAAGGCCCACGGCTG +
Preference number: 6 (lower is better)
Translates to: QPCPVCSSFTIT*LMNQPGEGPRL
Trigger: CAGCCGTGGGCCTTCCCCAGGCTGGTTCATCAGCCACGTGATGGTGAAGGAGCTGCACACGGGACAGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp CGACTCTCTCTCCTCATCCTCTGTCTGGTGCCCCTCAGCTGGGCCTaGGATGGTGGATGCGCCCAGCGCAGGTGGCGAGCTTGTTGTCGG +
Preference number: 6 (lower is better)
Translates to: RLSLLILCLVPLSWA*DGGCAQRRWRACCR
Trigger: CCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCTGAGGGGCACCAGACAGAGGATGAGGAGAGAGAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS TCA 72 bp ACGGTGTGTGCTTCCAGACCATGGTGGGGCTGCACCTaGCAGGCCATGTCCCGAGGAGCCGGGTTGACTGTC +
Preference number: 6 (lower is better)
Translates to: TVCASRPWWGCT*QAMSRGAGLTV
Trigger: GACAGTCAACCCGGCTCCTCGGGACATGGCCTGTCAGGTGCAGCCCCACCATGGTCTGGAAGCACACACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp GGGGCTGCTCTTGCCCTCCAGCAGCAACCAGGGCAGTaGGACACGCGTAGACGCACAGCAGGGAGAAGGACA +
Preference number: 6 (lower is better)
Translates to: GAALALQQQPGQ*DTRRRTAGRRT
Trigger: TGTCCTTCTCCCTGCTGTGCGTCTACGCGTGTCTCACTGCCCTGGTTGCTGCTGGAGGGCAAGAGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CAGCCCTGGTGCTGCGGTCAATCCACATGCTGGCCCTaGGTCGGGACAGGGCTGTGTGGGCTTCAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: QPWCCGQSTCWP*VGTGLCGLQSL
Trigger: CAAGGACTGAAGCCCACACAGCCCTGTCCCGACTCAGGGCCAGCATGTGGATTGACCGCAGCACCAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
CDS CCA 72 bp CTGAGAGTCGCCCCAGGGTCGTCAGGGTCGAAGGACTaGGTCCCTCTGAGGACAATGGGGGATGAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: LRVAPGSSGSKD*VPLRTMGDEVV
Trigger: GACCACCTCATCCCCCATTGTCCTCAGAGGGACCCAGTCCTTCGACCCTGACGACCCTGGGGCGACTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CAGCTCCTTCACCATCACGTGGCTGATGAACCAGCCTaGGGAAGGCCCACGGCTGTCGTGCCAGAGGCGGAT +
Preference number: 6 (lower is better)
Translates to: QLLHHHVADEPA*GRPTAVVPEAD
Trigger: ATCCGCCTCTGGCACGACAGCCGTGGGCCTTCCCCAGGCTGGTTCATCAGCCACGTGATGGTGAAGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp GGGGATAGAGGATCTCAGAACCAGACTGCGATGCCGTaGAGCTGGGGGTGCGAGGAATGCCAGGCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GDRGSQNQTAMP*SWGCEECQAEG
Trigger: GCCTTCCGCCTGGCATTCCTCGCACCCCCAGCTTCACGGCATCGCAGTCTGGTTCTGAGATCCTCTATCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp AAACAGTGGGAGCCGCGGCATCCAGTTGGTGTGCAGTaGAGGAGTCGAAGCAGGGATGTGCTGGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: KQWEPRHPVGVQ*RSRSRDVLGSQ
Trigger: CTGGCTCCCCAGCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp TCATGGGCTCTGTGGGGGTTCCCCTTGGAGCTGAAGTaGCAGGTTGGCCAAGGGTCACGGGTGAAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: SWALWGFPLELK*QVGQGSRVKVP
Trigger: GGGAACCTTCACCCGTGACCCTTGGCCAACCTGCCACTTCAGCTCCAAGGGGAACCCCCACAGAGCCCATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp GGATGGTGGATGCGCCCAGCGCAGGTGGCGAGCTTGTaGTCGGGCAGCCAAGACTTTTTCAACCTCGCCTGC +
Preference number: 6 (lower is better)
Translates to: GWWMRPAQVASL*SGSQDFFNLAC
Trigger: GCAGGCGAGGTTGAAAAAGTCTTGGCTGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp GAGCCATTGTGCCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTaGGTGTGCAGTGGAGGAGTCGAAGCAGGGATGTGCTGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: EPLCLKGNSGSRGIQ*VCSGGVEAGMCWGA
Trigger: GGCTCCCCAGCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAATGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp AGGTCAACCTGGCCGGAGCTCGGAAGCCAGTGTCAATaGCGACCGCATATAGCTGATGGCCCGGCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: RSTWPELGSQCQ*RPHIADGPAGK
Trigger: CTTCCCTGCCGGGCCATCAGCTATATGCGGTCGTCATTGACACTGGCTTCCGAGCTCCGGCCAGGTTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CTTCCTTTGGGCCCTGCCACTCCCAGAGAGAATGGCTaGTGCAGGTTGCTTGCGTGGCTCCTGTGCGTCTGG +
Preference number: 6 (lower is better)
Translates to: LPLGPATPRENG*CRLLAWLLCVW
Trigger: CCAGACGCACAGGAGCCACGCAAGCAACCTGCATCAGCCATTCTCTCTGGGAGTGGCAGGGCCCAAAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CCACAAATGGCCCACACTGCAGAGCTCCACCAAGGCTaGAGGGCCCTTGACCACTGGGGCATTAGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: PQMAHTAELHQG*RALDHWGISPS
Trigger: GGAGGGACTAATGCCCCAGTGGTCAAGGGCCCTTCAGCCTTGGTGGAGCTCTGCAGTGTGGGCCATTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp GGTGGTACTGCAGGGCTGAGTCGCTGCGGAAGATGCTaGATGACTCCACCAGGGATGAGGGGACGAGACTCC +
Preference number: 6 (lower is better)
Translates to: GGTAGLSRCGRC*MTPPGMRGRDS
Trigger: GGAGTCTCGTCCCCTCATCCCTGGTGGAGTCATTCAGCATCTTCCGCAGCGACTCAGCCCTGCAGTACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
ENST00000648482.1
CDS GCA 72 bp AGTAGGGGGATAGAGGATCTCAGAACCAGACTGCGATaGCGTGAAGCTGGGGGTGCGAGGAATGCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SRGIEDLRTRLR*REAGGARNARR
Trigger: CCGCCTGGCATTCCTCGCACCCCCAGCTTCACGGCATCGCAGTCTGGTTCTGAGATCCTCTATCCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp CAGCACTGGGCAGGGAAGAACCAGCCCTGTCCCGTGTaGAGCTCCTTCACCATCACGTGGCTGATGAACCAG +
Preference number: 6 (lower is better)
Translates to: QHWAGKNQPCPV*SSFTITWLMNQ
Trigger: CTGGTTCATCAGCCACGTGATGGTGAAGGAGCTGCACACGGGACAGGGCTGGTTCTTCCCTGCCCAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp TCCCCAGGAATTAGGACCATGGGGTGCCTCGGTCTGTaGTCCTCCTCTAAGTGGGCTGTGTGGCTCCACTCG +
Preference number: 6 (lower is better)
Translates to: SPGIRTMGCLGL*SSSKWAVWLHS
Trigger: CGAGTGGAGCCACACAGCCCACTTAGAGGAGGAGCACAGACCGAGGCACCCCATGGTCCTAATTCCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp CAGCTTAGGGGCTGGACAAGCTGTGCCATTGTCACTTaGCGCCTTCCTTTGGGCCCTGCCACTCCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: QLRGWTSCAIVT*RLPLGPATPRE
Trigger: CTCTCTGGGAGTGGCAGGGCCCAAAGGAAGGCGGCAAGTGACAATGGCACAGCTTGTCCAGCCCCTAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp TTGGTGTGCAGTGGAGGAGTCGAAGCAGGGATGTGCTaGGGAGCCAGCGGTGGCGCATTCCCAGTGATACCT +
Preference number: 6 (lower is better)
Translates to: LVCSGGVEAGMC*GASGGAFPVIP
Trigger: AGGTATCACTGGGAATGCGCCACCGCTGGCTCCCCAGCACATCCCTGCTTCGACTCCTCCACTGCACACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp AGCTGGGCCTTGGATGGTGGATGCGCCCAGCGCAGGTaGCGAGCTTGTTGTCGGGCAGCCAAGACTTTTTCA +
Preference number: 6 (lower is better)
Translates to: SWALDGGCAQRR*RACCRAAKTFS
Trigger: TGAAAAAGTCTTGGCTGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAGGCCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp ACGGGGTGCCTCCCGGGTACAGGCCATCCAGAAGTGTaGTCAGACTCCAGTCCCACCAGTCAGCGATGTTTC +
Preference number: 6 (lower is better)
Translates to: TGCLPGTGHPEV*SDSSPTSQRCF
Trigger: GAAACATCGCTGACTGGTGGGACTGGAGTCTGACCACACTTCTGGATGGCCTGTACCCGGGAGGCACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS CCA 72 bp CTGAGTGCCAGGAAGACCAGCTGGGGAAGCATGAGGTaGTACTGCAGGGCTGAGTCGCTGCGGAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: LSARKTSWGSMR*YCRAESLRKML
Trigger: CAGCATCTTCCGCAGCGACTCAGCCCTGCAGTACCACCTCATGCTTCCCCAGCTGGTCTTCCTGGCACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
ENST00000648482.1
CDS CAA 72 bp CCCACACTGCAGAGCTCCACCAAGGCTGAAGGGCCCTaGACCACTGGGGCATTAGTCCCTCCAAACCACTGC +
Preference number: 6 (lower is better)
Translates to: PTLQSSTKAEGP*TTGALVPPNHC
Trigger: GCAGTGGTTTGGAGGGACTAATGCCCCAGTGGTCAAGGGCCCTTCAGCCTTGGTGGAGCTCTGCAGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp CTTGGATGGTGGATGCGCCCAGCGCAGGTGGCGAGCTaGTTGTCGGGCAGCCAAGACTTTTTCAACCTCGCC +
Preference number: 6 (lower is better)
Translates to: LGWWMRPAQVAS*LSGSQDFFNLA
Trigger: GGCGAGGTTGAAAAAGTCTTGGCTGCCCGACAACAAGCTCGCCACCTGCGCTGGGCGCATCCACCATCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp AAGGCCGTGGGAGCTTCTGGGAGAAGTGGGAAAATGTaGAATCGGCCACAGGGGCACTCGCTGGGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: KAVGASGRSGKM*NRPQGHSLGAG
Trigger: ACCAGCTCCCAGCGAGTGCCCCTGTGGCCGATTTCACATTTTCCCACTTCTCCCAGAAGCTCCCACGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp TGCCCCCACCAGCCCTGCTACAAAGATGCTGGGGAGTaGGTGGCGCATCATGGAGGAGCAGGATGCCATTGT +
Preference number: 6 (lower is better)
Translates to: CPHQPCYKDAGE*VAHHGGAGCHC
Trigger: ACAATGGCATCCTGCTCCTCCATGATGCGCCACTCACTCCCCAGCATCTTTGTAGCAGGGCTGGTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS GCA 72 bp AAAGGAAACAGTGGGAGCCGCGGCATCCAGTTGGTGTaGAGTGGAGGAGTCGAAGCAGGGATGTGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: KGNSGSRGIQLV*SGGVEAGMCWG
Trigger: TCCCCAGCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GCCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTTaGTGTGCAGTGGAGGAGTCGAAGCAGGGATGTGCT +
Preference number: 6 (lower is better)
Translates to: ASKETVGAAASS*CAVEESKQGCA
Trigger: AGCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp TCTGTGGGGGTTCCCCTTGGAGCTGAAGTGGCAGGTTaGCCAAGGGTCACGGGTGAAGGTTCCCGTGAGAAT +
Preference number: 6 (lower is better)
Translates to: SVGVPLGAEVAG*PRVTGEGSREN
Trigger: ATTCTCACGGGAACCTTCACCCGTGACCCTTGGCCAACCTGCCACTTCAGCTCCAAGGGGAACCCCCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp TCGTGCCAGAGGCGGATCTTCCTCAGCAGGCCCAGTTaGGCAGGAGCGCTCAGGATAAAGGTGTGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SCQRRIFLSRPS*AGALRIKVCLE
Trigger: TTCCAGACACACCTTTATCCTGAGCGCTCCTGCCCAACTGGGCCTGCTGAGGAAGATCCGCCTCTGGCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp TCCCCAAACTGCAGGCCAAAGAAGCGGTCCCACAAATaGCCCACACTGCAGAGCTCCACCAAGGCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: SPNCRPKKRSHK*PTLQSSTKAEG
Trigger: CCCTTCAGCCTTGGTGGAGCTCTGCAGTGTGGGCCATTTGTGGGACCGCTTCTTTGGCCTGCAGTTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GCTCACTCCAACCACGGAGAGCTCCAGCCAGTTCCTTaGCTTTCGCCAGTAGCTGAGGACGCCCTTGTCCAT +
Preference number: 6 (lower is better)
Translates to: AHSNHGELQPVP*LSPVAEDALVH
Trigger: ATGGACAAGGGCGTCCTCAGCTACTGGCGAAAGCCAAGGAACTGGCTGGAGCTCTCCGTGGTTGGAGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS CAA 72 bp TGCCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTaGGTGTGCAGTGGAGGAGTCGAAGCAGGGATGTGC +
Preference number: 6 (lower is better)
Translates to: CLKGNSGSRGIQ*VCSGGVEAGMC
Trigger: GCACATCCCTGCTTCGACTCCTCCACTGCACACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp CTTGCAATAGAAAAGCTTCCGGAAGCCGAGTCCCCCTaGCAGACAGGTGAGCTCCCGCTCCACGCGACCATC +
Preference number: 6 (lower is better)
Translates to: LAIEKLPEAESP*QTGELPLHATI
Trigger: GATGGTCGCGTGGAGCGGGAGCTCACCTGTCTGCAAGGGGGACTCGGCTTCCGGAAGCTTTTCTATTGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp GGCCAAGGGTCACGGGTGAAGGTTCCCGTGAGAATGGTGTGGTCGTaGCATCAGGATCTGCAGTGCCAGGCTCAGTGGGCAGCAGGTTTA +
Preference number: 6 (lower is better)
Translates to: GQGSRVKVPVRMVWS*HQDLQCQAQWAAGL
Trigger: TAAACCTGCTGCCCACTGAGCCTGGCACTGCAGATCCTGATGCAACGACCACACCATTCTCACGGGAACCTTCACCCGTGACCCTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp CACAAATGGCCCACACTGCAGAGCTCCACCAAGGCTGAAGGGCCCTaGACCACTGGGGCATTAGTCCCTCCAAACCACTGCTGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: HKWPTLQSSTKAEGP*TTGALVPPNHCWVL
Trigger: AAGCACCCAGCAGTGGTTTGGAGGGACTAATGCCCCAGTGGTCAAGGGCCCTTCAGCCTTGGTGGAGCTCTGCAGTGTGGGCCATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp GTCCTCCCTTGTCCCACAGCCCCCAGGACCATTCAGGGTCACGTTTaGGTTCTCTGGGTCTATCAGGTAGGGGTTCTCAGGGCCTCCAAC +
Preference number: 6 (lower is better)
Translates to: VLPCPTAPRTIQGHV*VLWVYQVGVLRASN
Trigger: GTTGGAGGCCCTGAGAACCCCTACCTGATAGACCCAGAGAACCAAAACGTGACCCTGAATGGTCCTGGGGGCTGTGGGACAAGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
CDS TCA 72 bp GCTGCACCTGACAGGCCATGTCCCGAGGAGCCGGGTTaGCTGTCAAGTACAGCTGAGCTTTACCCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: AAPDRPCPEEPG*LSSTAELYPVS
Trigger: GCTTACTGGGTAAAGCTCAGCTGTACTTGACAGTCAACCCGGCTCCTCGGGACATGGCCTGTCAGGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp CCTCGACCCACAATCCACCTCCAGGAGGGCTACAGCTaGACAGATGAAGACCCCAGCTCTTGTCAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: PRPTIHLQEGYS*TDEDPSSCQCS
Trigger: TGAGCACTGACAAGAGCTGGGGTCTTCATCTGTGCAGCTGTAGCCCTCCTGGAGGTGGATTGTGGGTCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp CTGTGCCATTGTCACTTGCCGCCTTCCTTTGGGCCCTaGCACTCCCAGAGAGAATGGCTGATGCAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: LCHCHLPPSFGP*HSQREWLMQVA
Trigger: AGCAACCTGCATCAGCCATTCTCTCTGGGAGTGGCAGGGCCCAAAGGAAGGCGGCAAGTGACAATGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GCCTGGAGACACCTTTCCTGGTCATCAGAAATGTTCTaGGCTGCCTCCTCGGCCATGTCCTGTGCAAGCTGG +
Preference number: 6 (lower is better)
Translates to: AWRHLSWSSEMF*AASSAMSCASW
Trigger: CCAGCTTGCACAGGACATGGCCGAGGAGGCAGCCCAGAACATTTCTGATGACCAGGAAAGGTGTCTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CAAGGGTCACGGGTGAAGGTTCCCGTGAGAATGGTGTaGTCGTTGCATCAGGATCTGCAGTGCCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: QGSRVKVPVRMV*SLHQDLQCQAQ
Trigger: CTGAGCCTGGCACTGCAGATCCTGATGCAACGACCACACCATTCTCACGGGAACCTTCACCCGTGACCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp TCACGGGTGAAGGTTCCCGTGAGAATGGTGTGGTCGTaGCATCAGGATCTGCAGTGCCAGGCTCAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: SRVKVPVRMVWS*HQDLQCQAQWA
Trigger: TGCCCACTGAGCCTGGCACTGCAGATCCTGATGCAACGACCACACCATTCTCACGGGAACCTTCACCCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp CCCCGTAGGGAGGATCTCCACTCTCAGGGACACGCTGGTGAAGAGTaGGGTTGGAGGGTTATAGAGAGTGAAGTGCACAGACACAGCCCT +
Preference number: 6 (lower is better)
Translates to: PRREDLHSQGHAGEE*GWRVIESEVHRHSP
Trigger: AGGGCTGTGTCTGTGCACTTCACTCTCTATAACCCTCCAACCCAACTCTTCACCAGCGTGTCCCTGAGAGTGGAGATCCTCCCTACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
ENST00000648482.1
CDS TCA 72 bp ATCTCCAGGGCTCTCCTCGGCACTCAAGCTAGGTCCTaGTCCTGGAAAGCTGGTGTCCTTAGCTGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: ISRALLGTQARS*SWKAGVLSWLS
Trigger: AGACAGCCAGCTAAGGACACCAGCTTTCCAGGATCAGGACCTAGCTTGAGTGCCGAGGAGAGCCCTGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GGAACACCCGGGTCTCAGAAGAGTTCCGGCCACCACTaGAGACCCTCAGCATCACAAGGAACTGATCATAGC +
Preference number: 6 (lower is better)
Translates to: GTPGSQKSSGHH*RPSASQGTDHS
Trigger: GCTATGATCAGTTCCTTGTGATGCTGAGGGTCTCCAGTGGTGGCCGGAACTCTTCTGAGACCCGGGTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CAGTGGGCAGCAGGTTTAACTGTGATGACTCTGAAATaGCACCGAGTCCCAGCGAGCCAAGCAGCCCCACTA +
Preference number: 6 (lower is better)
Translates to: QWAAGLTVMTLK*HRVPASQAAPL
Trigger: TAGTGGGGCTGCTTGGCTCGCTGGGACTCGGTGCCATTTCAGAGTCATCACAGTTAAACCTGCTGCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CCCACCAGCCCTGCTACAAAGATGCTGGGGAGTGAGTaGCGCATCATGGAGGAGCAGGATGCCATTGTGTTT +
Preference number: 6 (lower is better)
Translates to: PTSPATKMLGSE*RIMEEQDAIVF
Trigger: AAACACAATGGCATCCTGCTCCTCCATGATGCGCCACTCACTCCCCAGCATCTTTGTAGCAGGGCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS CAA 72 bp TGTCCCACAGCCCCCAGGACCATTCAGGGTCACGTTTaGGTTCTCTGGGTCTATCAGGTAGGGGTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: CPTAPRTIQGHV*VLWVYQVGVLR
Trigger: CCTGAGAACCCCTACCTGATAGACCCAGAGAACCAAAACGTGACCCTGAATGGTCCTGGGGGCTGTGGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
CDS CAA 90 bp CTTTCGCCAGTAGCTGAGGACGCCCTTGTCCATCATACGGTAGAGTaGAACACAGAGGTGGATCAGGCTGAGTGCCAGGAAGACCAGCTG +
Preference number: 6 (lower is better)
Translates to: LSPVAEDALVHHTVE*NTEVDQAECQEDQL
Trigger: CAGCTGGTCTTCCTGGCACTCAGCCTGATCCACCTCTGTGTTCAACTCTACCGTATGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
ENST00000648482.1
CDS TCA 72 bp CCAGCACTCAAAGGCCACACTGGCATTTACCAGAGCTaGGGAGGGGGACGTGAGCCGATTGGCCACAATTTT +
Preference number: 6 (lower is better)
Translates to: PALKGHTGIYQS*GGGREPIGHNF
Trigger: AAAATTGTGGCCAATCGGCTCACGTCCCCCTCCTCAGCTCTGGTAAATGCCAGTGTGGCCTTTGAGTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp GCTCGGAAGCCAGTGTCAATGACGACCGCATATAGCTaGTGGCCCGGCAGGGAAGCTTCTTGCAGAAAGATG +
Preference number: 6 (lower is better)
Translates to: ARKPVSMTTAYS*WPGREASCRKM
Trigger: CATCTTTCTGCAAGAAGCTTCCCTGCCGGGCCATCAGCTATATGCGGTCGTCATTGACACTGGCTTCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp GGCCAAACCTGTAGGCTAGAAATCCTGTCCCCAAACTaGAGGCCAAAGAAGCGGTCCCACAAATGGCCCACA +
Preference number: 6 (lower is better)
Translates to: GQTCRLEILSPN*RPKKRSHKWPT
Trigger: TGTGGGCCATTTGTGGGACCGCTTCTTTGGCCTGCAGTTTGGGGACAGGATTTCTAGCCTACAGGTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp ATGAAAATACAGCAGACCACGGAGAGGGACAGCAGGTaGAGCCACTGCACACATTGCTCCTGGCCAAACCTG +
Preference number: 6 (lower is better)
Translates to: MKIQQTTERDSR*SHCTHCSWPNL
Trigger: CAGGTTTGGCCAGGAGCAATGTGTGCAGTGGCTGCACCTGCTGTCCCTCTCCGTGGTCTGCTGTATTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GATGAGCTCAAGCCTCACTCCTTTGTCAATCACAAATaGCCCCGAGAACTGGCCTTGAGCAAGGAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: DELKPHSFVNHK*PRELALSKECP
Trigger: CGGGCACTCCTTGCTCAAGGCCAGTTCTCGGGGCCATTTGTGATTGACAAAGGAGTGAGGCTTGAGCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp GACCCTCAGCATCACAAGGAACTGATCATAGCTGTCACTGAGCCATaGTGCCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: DPQHHKELIIAVTEP*CLKGNSGSRGIQLV
Trigger: CACCAACTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAATGGCTCAGTGACAGCTATGATCAGTTCCTTGTGATGCTGAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp CTTTCGCCAGTAGCTGAGGACGCCCTTGTCCATCATACGGTAGAGTaGAACACAGAGGTGGATCAGGCTGAGTGCCAGGAAGACCAGCTT +
Preference number: 6 (lower is better)
Translates to: LSPVAEDALVHHTVE*NTEVDQAECQEDQL
Trigger: AAGCTGGTCTTCCTGGCACTCAGCCTGATCCACCTCTGTGTTCAACTCTACCGTATGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462350.1
CDS TCA 72 bp ATGTCCCGAGGAGCCGGGTTGACTGTCAAGTACAGCTaGGCTTTACCCAGTAAGCCATGCTTCGAAGCCACA +
Preference number: 6 (lower is better)
Translates to: MSRGAGLTVKYS*ALPSKPCFEAT
Trigger: TGTGGCTTCGAAGCATGGCTTACTGGGTAAAGCTCAGCTGTACTTGACAGTCAACCCGGCTCCTCGGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp AGAGCTCCAGCCAGTTCCTTGGCTTTCGCCAGTAGCTaGGGACGCCCTTGTCCATCATACGGTAGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: RAPASSLAFASS*GRPCPSYGRVE
Trigger: TTCAACTCTACCGTATGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAGCCAAGGAACTGGCTGGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS TCA 72 bp CTACCTCCAGCCAGTTCCTTGGCTTTCGCCAGTAGCTaGGGACGCCCTTGTCCATCATACGGTAGAGTTGAA +
Preference number: 6 (lower is better)
Translates to: LPPASSLAFASS*GRPCPSYGRVE
Trigger: TTCAACTCTACCGTATGATGGACAAGGGCGTCCTCAGCTACTGGCGAAAGCCAAGGAACTGGCTGGAGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433506.1
ENST00000462350.1
ENST00000483616.1
CDS GCA 72 bp TACAGCTGCACAGATGAAGACCCCAGCTCTTGTCAGTaGTCACAGACAGCTCACCACCAAAGGAAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: YSCTDEDPSSCQ*SQTAHHQRKGS
Trigger: GCTGCCTTTCCTTTGGTGGTGAGCTGTCTGTGAGCACTGACAAGAGCTGGGGTCTTCATCTGTGCAGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp CCTCCAGGCCCACACAGTAGTTGCTGTACACCACACTaGCTTCAATCTGAACCTTGGCAAGGGCAGTGTAGT +
Preference number: 6 (lower is better)
Translates to: PPGPHSSCCTPH*LQSEPWQGQCS
Trigger: ACTACACTGCCCTTGCCAAGGTTCAGATTGAAGGCAGTGTGGTGTACAGCAACTACTGTGTGGGCCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp CACAAGGAACTGATCATAGCTGTCACTGAGCCATTGTaGCTCAAAGGAAACAGTGGGAGCCGCGGCATCCAG +
Preference number: 6 (lower is better)
Translates to: HKELIIAVTEPL*LKGNSGSRGIQ
Trigger: CTGGATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAATGGCTCAGTGACAGCTATGATCAGTTCCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp GTGAGAATGGTGTGGTCGTTGCATCAGGATCTGCAGTaGCAGGCTCAGTGGGCAGCAGGTTTAACTGTGATG +
Preference number: 6 (lower is better)
Translates to: VRMVWSLHQDLQ*QAQWAAGLTVM
Trigger: CATCACAGTTAAACCTGCTGCCCACTGAGCCTGGCACTGCAGATCCTGATGCAACGACCACACCATTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp GACATCTCCAGCAAGAGTAACAAGGTGGCCGGAAACTaGATAGTAGGTGAGGCTCACTCCAACCACGGAGAG +
Preference number: 6 (lower is better)
Translates to: DISSKSNKVAGN*IVGEAHSNHGE
Trigger: CTCTCCGTGGTTGGAGTGAGCCTCACCTACTATGCAGTTTCCGGCCACCTTGTTACTCTTGCTGGAGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS CCA 72 bp CTCCACTCTCAGGGACACGCTGGTGAAGAGTTGGGTTaGAGGGTTATAGAGAGTGAAGTGCACAGACACAGC +
Preference number: 6 (lower is better)
Translates to: LHSQGHAGEELG*RVIESEVHRHS
Trigger: GCTGTGTCTGTGCACTTCACTCTCTATAACCCTCCAACCCAACTCTTCACCAGCGTGTCCCTGAGAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
ENST00000648482.1
CDS CAA 72 bp CCTCTCCAGAAGCCATATGAACACGGAATCCCAGATTaGGAGGTGCCCGAGCTTCCACTTCCAGGGAGCAAT +
Preference number: 6 (lower is better)
Translates to: PLQKPYEHGIPD*EVPELPLPGSN
Trigger: ATTGCTCCCTGGAAGTGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGTGTTCATATGGCTTCTGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp GCATTTACCAGAGCTGAGGAGGGGGACGTGAGCCGATaGGCCACAATTTTCTTCTGCACCCTGATGACATGG +
Preference number: 6 (lower is better)
Translates to: AFTRAEEGDVSR*ATIFFCTLMTW
Trigger: CCATGTCATCAGGGTGCAGAAGAAAATTGTGGCCAATCGGCTCACGTCCCCCTCCTCAGCTCTGGTAAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp GTAGCTGAGGACGCCCTTGTCCATCATACGGTAGAGTaGAACACAGAGGTGGATCAGGCTGAGTGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: VAEDALVHHTVE*NTEVDQAECQE
Trigger: TTCCTGGCACTCAGCCTGATCCACCTCTGTGTTCAACTCTACCGTATGATGGACAAGGGCGTCCTCAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000462350.1
ENST00000483616.1
ENST00000648482.1
CDS CAA 90 bp TGCACCCTGATGACATGGGGCTCAGAGACCACACTGCTCATCCTGTaGGAAGCCTTAACCATCACACGATACCATTGGGGGATGCTGAGT +
Preference number: 6 (lower is better)
Translates to: CTLMTWGSETTLLIL*EALTITRYHWGMLS
Trigger: ACTCAGCATCCCCCAATGGTATCGTGTGATGGTTAAGGCTTCCAACAGGATGAGCAGTGTGGTCTCTGAGCCCCATGTCATCAGGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CCCTCAGCATCACAAGGAACTGATCATAGCTGTCACTaGGCCATTGTGCCTCAAAGGAAACAGTGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: PSASQGTDHSCH*AIVPQRKQWEP
Trigger: CGGCTCCCACTGTTTCCTTTGAGGCACAATGGCTCAGTGACAGCTATGATCAGTTCCTTGTGATGCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp AGGGGTGGCTGGCAGGGCTCGCACACGATGAAAAGTTaGTGTCTTAGAGTGGAGGCACTGACATTATTGAAG +
Preference number: 6 (lower is better)
Translates to: RGGWQGSHTMKS*CLRVEALTLLK
Trigger: CTTCAATAATGTCAGTGCCTCCACTCTAAGACAGCAACTTTTCATCGTGTGCGAGCCCTGCCAGCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CTCTCCAGAAGCCATATGAACACGGAATCCCAGATTTaGAGGTGCCCGAGCTTCCACTTCCAGGGAGCAATT +
Preference number: 6 (lower is better)
Translates to: LSRSHMNTESQI*RCPSFHFQGAI
Trigger: AATTGCTCCCTGGAAGTGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGTGTTCATATGGCTTCTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp CTGCTACAAAGATGCTGGGGAGTGAGTGGCGCATCATaGAGGAGCAGGATGCCATTGTGTTTTGAATGCCAG +
Preference number: 6 (lower is better)
Translates to: LLQRCWGVSGAS*RSRMPLCFECQ
Trigger: CTGGCATTCAAAACACAATGGCATCCTGCTCCTCCATGATGCGCCACTCACTCCCCAGCATCTTTGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS CAA 72 bp CATCACAAGGAACTGATCATAGCTGTCACTGAGCCATaGTGCCTCAAAGGAAACAGTGGGAGCCGCGGCATC +
Preference number: 6 (lower is better)
Translates to: HHKELIIAVTEP*CLKGNSGSRGI
Trigger: GATGCCGCGGCTCCCACTGTTTCCTTTGAGGCACAATGGCTCAGTGACAGCTATGATCAGTTCCTTGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp GTCACCACCACAGTGCACGGCTGGACCTTGGAGCCTTaGCCATCTGTGATTTCAGTGGAAACCATGACTTTG +
Preference number: 6 (lower is better)
Translates to: VTTTVHGWTLEP*PSVISVETMTL
Trigger: CAAAGTCATGGTTTCCACTGAAATCACAGATGGCAAAGGCTCCAAGGTCCAGCCGTGCACTGTGGTGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp GAGGATCTCCACTCTCAGGGACACGCTGGTGAAGAGTaGGGTTGGAGGGTTATAGAGAGTGAAGTGCACAGA +
Preference number: 6 (lower is better)
Translates to: EDLHSQGHAGEE*GWRVIESEVHR
Trigger: TCTGTGCACTTCACTCTCTATAACCCTCCAACCCAACTCTTCACCAGCGTGTCCCTGAGAGTGGAGATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289672.7
ENST00000433506.1
ENST00000483616.1
ENST00000648482.1
CDS CAA 90 bp AGGGGCTTCTCTGGACAGGAGAGCTCCTTGGTTTCTGACAGTCCATaGTCGCCACATAAAACAATGTACACCTTTGAGGTCAACCTGGCC +
Preference number: 6 (lower is better)
Translates to: RGFSGQESSLVSDSP*SPHKTMYTFEVNLA
Trigger: GGCCAGGTTGACCTCAAAGGTGTACATTGTTTTATGTGGCGACAATGGACTGTCAGAAACCAAGGAGCTCTCCTGTCCAGAGAAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CAAGCACTTCATCTTCATGGACACTGCTGGAGTTCATaGACGCAGACACGGCCTCATGGCCAATCTCCACAT +
Preference number: 6 (lower is better)
Translates to: QALHLHGHCWSS*TQTRPHGQSPH
Trigger: ATGTGGAGATTGGCCATGAGGCCGTGTCTGCGTTCATGAACTCCAGCAGTGTCCATGAAGATGAAGTGCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CAAAGTCCCACAGGTAGGCAACATCTGTGCCGAAGTTaGTCCAGCACTCAAAGGCCACACTGGCATTTACCA +
Preference number: 6 (lower is better)
Translates to: QSPTGRQHLCRS*SSTQRPHWHLP
Trigger: TGGTAAATGCCAGTGTGGCCTTTGAGTGCTGGATCAACTTCGGCACAGATGTTGCCTACCTGTGGGACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp CCGACAGCCAGACATGGAAATCCTCCAGGTACTCTGTaGACTTGCAATAGAAAAGCTTCCGGAAGCCGAGTC +
Preference number: 6 (lower is better)
Translates to: PTARHGNPPGTL*TCNRKASGSRV
Trigger: GACTCGGCTTCCGGAAGCTTTTCTATTGCAAGTTCACAGAGTACCTGGAGGATTTCCATGTCTGGCTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp AGACAGAGACGGATTGCATCTTATACCAGACAGTCATaGTGTGCCAAGCCTGGCTGTCACCCACTTGAGTCT +
Preference number: 6 (lower is better)
Translates to: RQRRIASYTRQS*CAKPGCHPLES
Trigger: AGACTCAAGTGGGTGACAGCCAGGCTTGGCACAGCATGACTGTCTGGTATAAGATGCAATCCGTCTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp AGAAGCCATATGAACACGGAATCCCAGATTTGGAGGTaGCCGAGCTTCCACTTCCAGGGAGCAATTAAGAAC +
Preference number: 6 (lower is better)
Translates to: RSHMNTESQIWR*PSFHFQGAIKN
Trigger: GTTCTTAATTGCTCCCTGGAAGTGGAAGCTCGGGCACCTCCAAATCTGGGATTCCGTGTTCATATGGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS GCA 72 bp GGTGTAAGAAAGACCTTGGGAAATATCACAGAAGACTaGAGCTTCAAACGTCACTCCCAGCCTCACAGGCTG +
Preference number: 6 (lower is better)
Translates to: GVRKTLGNITED*SFKRHSQPHRL
Trigger: CAGCCTGTGAGGCTGGGAGTGACGTTTGAAGCTGCAGTCTTCTGTGATATTTCCCAAGGTCTTTCTTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GGCTCTGTAGCTTGGAAATGTCACTCACTTCAAAACTaGCCTTCAGCTTTCTCCTTAGGAGAGCGAATGCCG +
Preference number: 6 (lower is better)
Translates to: GSVAWKCHSLQN*PSAFSLGERMP
Trigger: CGGCATTCGCTCTCCTAAGGAGAAAGCTGAAGGCCAGTTTTGAAGTGAGTGACATTTCCAAGCTACAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp AGGGAGCCCTTCAGAGTCCATCAAGTTCCAGGTGTAAGAAAGACCTaGGGAAATATCACAGAAGACTGCAGCTTCAAACGTCACTCCCAG +
Preference number: 6 (lower is better)
Translates to: REPFRVHQVPGVRKT*GNITEDCSFKRHSQ
Trigger: CTGGGAGTGACGTTTGAAGCTGCAGTCTTCTGTGATATTTCCCAAGGTCTTTCTTACACCTGGAACTTGATGGACTCTGAAGGGCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp GCTGGTGTCCTTAGCTGGCTGTCTTCCTCCCGATGGTATTGCTTCTaGAATGTCACTGTAATAGGCTTCAAAATCAGAGAGGTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: AGVLSWLSSSRWYCF*NVTVIGFKIREVRV
Trigger: GACCCTCACCTCTCTGATTTTGAAGCCTATTACAGTGACATTCAAGAAGCAATACCATCGGGAGGAAGACAGCCAGCTAAGGACACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp TCCTGTATTCGTGACCATTGGTTGCAGGAGGCAGTTTaGTCCTCCTTAGACAAACGACTCAGGATTCTGGTG +
Preference number: 6 (lower is better)
Translates to: SCIRDHWLQEAV*SSLDKRLRILV
Trigger: CACCAGAATCCTGAGTCGTTTGTCTAAGGAGGACAAAACTGCCTCCTGCAACCAATGGTCACGAATACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp CTTTCAAACAGGGGCTTCTCTGGACAGGAGAGCTCCTaGGTTTCTGACAGTCCATTGTCGCCACATAAAACA +
Preference number: 6 (lower is better)
Translates to: LSNRGFSGQESS*VSDSPLSPHKT
Trigger: TGTTTTATGTGGCGACAATGGACTGTCAGAAACCAAGGAGCTCTCCTGTCCAGAGAAGCCCCTGTTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp CTGGAATTCCTTTCAAACAGGGGCTTCTCTGGACAGGAGAGCTCCTaGGTTTCTGACAGTCCATTGTCGCCACATAAAACAATGTACACC +
Preference number: 6 (lower is better)
Translates to: LEFLSNRGFSGQESS*VSDSPLSPHKTMYT
Trigger: GGTGTACATTGTTTTATGTGGCGACAATGGACTGTCAGAAACCAAGGAGCTCTCCTGTCCAGAGAAGCCCCTGTTTGAAAGGAATTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp ATCTCCCATATATTACACACAAAAGCAGAAGCAGCATaGGGATGTCCATGGAAATGTCTCTCAGGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: ISHILHTKAEAA*GCPWKCLSGQP
Trigger: GGGCTGCCCTGAGAGACATTTCCATGGACATCCTCATGCTGCTTCTGCTTTTGTGTGTAATATATGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS TCA 72 bp AGGGTGAGGTCCATAAATGCTCGGCAAAGTCCTCTGTaGAACTGGTTAGTGACATCTCCAGCAAGAGTAACA +
Preference number: 6 (lower is better)
Translates to: RVRSINARQSPL*NWLVTSPARVT
Trigger: TGTTACTCTTGCTGGAGATGTCACTAACCAGTTTCACAGAGGACTTTGCCGAGCATTTATGGACCTCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000648482.1
CDS CCA 72 bp AAAGCTGGTGTCCTTAGCTGGCTGTCTTCCTCCCGATaGTATTGCTTCTTGAATGTCACTGTAATAGGCTTC +
Preference number: 6 (lower is better)
Translates to: KAGVLSWLSSSR*YCFLNVTVIGF
Trigger: GAAGCCTATTACAGTGACATTCAAGAAGCAATACCATCGGGAGGAAGACAGCCAGCTAAGGACACCAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GCTGCAGTTCACTTTTTCAGGAGAAGTCCCTGGTTGTaGAGAGAAACGTTCAGATTTCCACTCTCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: AAVHFFRRSPWL*RETFRFPLSLV
Trigger: GACAAGAGAGAGTGGAAATCTGAACGTTTCTCTCCACAACCAGGGACTTCTCCTGAAAAAGTGAACTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp AGGACGTACGTCTCTCCACTGCTCAGAGAGTATGGCTaGATTGTCACTGTCTGTTCTGTAATACCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: RTYVSPLLREYG*IVTVCSVIPED
Trigger: ATCCTCAGGTATTACAGAACAGACAGTGACAATCAAGCCATACTCTCTGAGCAGTGGAGAGACGTACGTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp GGTTGTGGAGAGAAACGTTCAGATTTCCACTCTCTCTaGTCCCAAAACAGGCATCGGATCCACTGGAAATGT +
Preference number: 6 (lower is better)
Translates to: GCGEKRSDFHSL*SQNRHRIHWKC
Trigger: ACATTTCCAGTGGATCCGATGCCTGTTTTGGGACAAGAGAGAGTGGAAATCTGAACGTTTCTCTCCACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp TCTGGACAGGAGAGCTCCTTGGTTTCTGACAGTCCATaGTCGCCACATAAAACAATGTACACCTTTGAGGTC +
Preference number: 6 (lower is better)
Translates to: SGQESSLVSDSP*SPHKTMYTFEV
Trigger: GACCTCAAAGGTGTACATTGTTTTATGTGGCGACAATGGACTGTCAGAAACCAAGGAGCTCTCCTGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp ATTAATGCATCCTGTATTCGTGACCATTGGTTGCAGGAGGCAGTTTaGTCCTCCTTAGACAAACGACTCAGGATTCTGGTGATCACAGTG +
Preference number: 6 (lower is better)
Translates to: INASCIRDHWLQEAV*SSLDKRLRILVITV
Trigger: CACTGTGATCACCAGAATCCTGAGTCGTTTGTCTAAGGAGGACAAAACTGCCTCCTGCAACCAATGGTCACGAATACAGGATGCATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp TGTAATTCCTTCTTCATGTCGATAGACTTCCTCCTTCGAGTTTTCTaGCTCAGAGACTTCCCAGACTCTGGATATGAGACCGATGAGCTC +
Preference number: 6 (lower is better)
Translates to: CNSFFMSIDFLLRVF*LRDFPDSGYETDEL
Trigger: GAGCTCATCGGTCTCATATCCAGAGTCTGGGAAGTCTCTGAGCAAGAAAACTCGAAGGAGGAAGTCTATCGACATGAAGAAGGAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp TTCTTCATGTCGATAGACTTCCTCCTTCGAGTTTTCTaGCTCAGAGACTTCCCAGACTCTGGATATGAGACC +
Preference number: 6 (lower is better)
Translates to: FFMSIDFLLRVF*LRDFPDSGYET
Trigger: GGTCTCATATCCAGAGTCTGGGAAGTCTCTGAGCAAGAAAACTCGAAGGAGGAAGTCTATCGACATGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp AACCATGACTTTGTAATTGTCCAAGTGCTCACCAGCTaGCAACACAAAATAATACTGGGTGTCTCTCCCATG +
Preference number: 6 (lower is better)
Translates to: NHDFVIVQVLTS*QHKIILGVSPM
Trigger: CATGGGAGAGACACCCAGTATTATTTTGTGTTGCCAGCTGGTGAGCACTTGGACAATTACAAAGTCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp CTTAGCTGGCTGTCTTCCTCCCGATGGTATTGCTTCTaGAATGTCACTGTAATAGGCTTCAAAATCAGAGAG +
Preference number: 6 (lower is better)
Translates to: LSWLSSSRWYCF*NVTVIGFKIRE
Trigger: CTCTCTGATTTTGAAGCCTATTACAGTGACATTCAAGAAGCAATACCATCGGGAGGAAGACAGCCAGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp TCTGTAGAGATTCCTGGGGGTTTTCGGAAAGCTCAGTaGACTGATGGAGATTCACTTTATCCCGAAGTAATA +
Preference number: 6 (lower is better)
Translates to: SVEIPGGFRKAQ*TDGDSLYPEVI
Trigger: TATTACTTCGGGATAAAGTGAATCTCCATCAGTTCACTGAGCTTTCCGAAAACCCCCAGGAATCTCTACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CCA 72 bp GATCTTATGGGACCACCACCTTGGCTGAAATTCGTGTaGTACATGACGGTAACTGTAACAACACTAAATGAT +
Preference number: 6 (lower is better)
Translates to: DLMGPPPWLKFV*YMTVTVTTLND
Trigger: ATCATTTAGTGTTGTTACAGTTACCGTCATGTACCACACGAATTTCAGCCAAGGTGGTGGTCCCATAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483616.1
CDS CAA 72 bp TTCAGAGTCCATCAAGTTCCAGGTGTAAGAAAGACCTaGGGAAATATCACAGAAGACTGCAGCTTCAAACGT +
Preference number: 6 (lower is better)
Translates to: FRVHQVPGVRKT*GNITEDCSFKR
Trigger: ACGTTTGAAGCTGCAGTCTTCTGTGATATTTCCCAAGGTCTTTCTTACACCTGGAACTTGATGGACTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 90 bp CACTGGCATCTTTCTGAGAAGCAGCAGGTATATAAATCTGCACAATaGACTCATCCCAGAAGTAGATCTGCTTCACAAGAAAATCAGAGG +
Preference number: 6 (lower is better)
Translates to: HWHLSEKQQVYKSAQ*THPRSRSASQENQR
Trigger: CCTCTGATTTTCTTGTGAAGCAGATCTACTTCTGGGATGAGTCAATTGTGCAGATTTATATACCTGCTGCTTCTCAGAAAGATGCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp AGAGATTCCTGGGGGTTTTCGGAAAGCTCAGTGAACTaGTGGAGATTCACTTTATCCCGAAGTAATACAAAT +
Preference number: 6 (lower is better)
Translates to: RDSWGFSESSVN*WRFTLSRSNTN
Trigger: ATTTGTATTACTTCGGGATAAAGTGAATCTCCATCAGTTCACTGAGCTTTCCGAAAACCCCCAGGAATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS CAA 72 bp CTTTCTGAGAAGCAGCAGGTATATAAATCTGCACAATaGACTCATCCCAGAAGTAGATCTGCTTCACAAGAA +
Preference number: 6 (lower is better)
Translates to: LSEKQQVYKSAQ*THPRSRSASQE
Trigger: TTCTTGTGAAGCAGATCTACTTCTGGGATGAGTCAATTGTGCAGATTTATATACCTGCTGCTTCTCAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp TTTCTGAGAAGCAGCAGGTATATAAATCTGCACAATTaGCTCATCCCAGAAGTAGATCTGCTTCACAAGAAA +
Preference number: 6 (lower is better)
Translates to: FLRSSRYINLHN*LIPEVDLLHKK
Trigger: TTTCTTGTGAAGCAGATCTACTTCTGGGATGAGTCAATTGTGCAGATTTATATACCTGCTGCTTCTCAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289672.7
CDS TCA 72 bp TTTCTGGCATTTCTTGTAAATTCTTTCCGGATAGCTTaGTTGAGGGAGTATTCATCTTGGGAAAATCTCCCA +
Preference number: 6 (lower is better)
Translates to: FLAFLVNSFRIA*LREYSSWENLP
Trigger: TGGGAGATTTTCCCAAGATGAATACTCCCTCAATCAAGCTATCCGGAAAGAATTTACAAGAAATGCCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289672.7
ENST00000483616.1
CDS TCA 72 bp GCCTACATACAAGGTCAGAATCAAGATGTCATTAGGTaGCAGAAATTTCTTAGCACCATAAGATCTTATGGG +
Preference number: 6 (lower is better)
Translates to: AYIQGQNQDVIR*QKFLSTIRSYG
Trigger: CCCATAAGATCTTATGGTGCTAAGAAATTTCTGTCACCTAATGACATCTTGATTCTGACCTTGTATGTAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483616.1