RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PJA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198961

Ensembl transcript IDs: ENST00000361189.7, ENST00000361557.4, ENST00000511624.1, ENST00000512822.1

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCACATACTCGTCCACTGTGTGTGATCACCTGAAGGAGACATTGTaGATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGC +
Preference number: 1 (lower is better)
Translates to: CTYSSTVCDHLKETL*ILVWGYIITKMTLC
Trigger: GCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTGATCACACACAGTGGACGAGTATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR TCA 90 bp AGTGAACTATTATGTCCATGTTTGCACATACTCGTCCACTGTGTGTaGTCACCTGAAGGAGACATTGTGCATCTTAGTTTGGGGTTATAT +
Preference number: 1 (lower is better)
Translates to: SELLCPCLHILVHCV*SPEGDIVHLSLGLY
Trigger: ATATAACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTGATCACACACAGTGGACGAGTATGTGCAAACATGGACATAATAGTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR CCA 90 bp TCCACTGTGTGTGATCACCTGAAGGAGACATTGTGCATCTTAGTTTaGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGAC +
Preference number: 1 (lower is better)
Translates to: STVCDHLKETLCILV*GYIITKMTLCKFSD
Trigger: GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTGATCACACACAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR GCA 90 bp ATTCAGCTCATTGTACCAAGCCCTGAGCACACTAGATTCTTTGTATaGTTTACTAACCTTACGTTAAGCACATCCACTGGTTTCATTAAG +
Preference number: 1 (lower is better)
Translates to: IQLIVPSPEHTRFFV*FTNLTLSTSTGFIK
Trigger: CTTAATGAAACCAGTGGATGTGCTTAACGTAAGGTTAGTAAAGCATACAAAGAATCTAGTGTGCTCAGGGCTTGGTACAATGAGCTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR TCA 90 bp TACAGTCATCATTCTCTAGTGTTAACATCAAATCACATTTGTAAGTaGACTATTATGTCCATGTTTGCACATACTCGTCCACTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: YSHHSLVLTSNHICK*TIMSMFAHTRPLCV
Trigger: CACACACAGTGGACGAGTATGTGCAAACATGGACATAATAGTTCACTTACAAATGTGATTTGATGTTAACACTAGAGAATGATGACTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR CAA 90 bp GTTTGCACATACTCGTCCACTGTGTGTGATCACCTGAAGGAGACATaGTGCATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTG +
Preference number: 2 (lower is better)
Translates to: VCTYSSTVCDHLKET*CILVWGYIITKMTL
Trigger: CAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTGATCACACACAGTGGACGAGTATGTGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR TCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACCTGTGTGTGATCACCTaGAGGAGACATTGTGCATCT +
Preference number: 2 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHLCVIT*RRHCAS
Trigger: AGATGCACAATGTCTCCTTCAGGTGATCACACACAG...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACTAAAGAAAATGGATaGACTGTCTCAACATTCAGC +
Preference number: 2 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTKENG*TVSTFS
Trigger: GCTGAATGTTGAGACAGTGCATCCATTTTCTTTAGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR GCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGACAAAGATGACCCTGTaGAAGTTTTCAGACCTTCCA +
Preference number: 2 (lower is better)
Translates to: SNNILVSELASLSLYQSLTKMTL*KFSDLP
Trigger: TGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR GCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGTTCAGCTCTCAACATTaGTGGTTGAGTTTGGAACCA +
Preference number: 2 (lower is better)
Translates to: SNNILVSELASLSLYQSLFSSQH*WLSLEP
Trigger: TGGTTCCAAACTCAACCAGCAATGTTGAGAGCTGAA...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGAGTAAGTGTCACAACTaGTCAACAGTACTTAAAAGG +
Preference number: 2 (lower is better)
Translates to: SNNILVSELASLSLYQSLSKCHN*STVLKR
Trigger: CCTTTTAAGTACTGTTGATCAGTTGTGACACTTACT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR GCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAACTAAAGAAAATGGATaGACTGTCTCAACATTCAGC +
Preference number: 2 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRTKENG*TVSTFS
Trigger: GCTGAATGTTGAGACAGTGCATCCATTTTCTTTAGT...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACAATATTAAACAAATGTaGCATGAGTGTTCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDNIKQM*HECSGP
Trigger: AGGCCCAGAACACTCATGGCACATTTGTTTAATATT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACGGATACACAGTATTTTaGTGTAAATACCAGACACAT +
Preference number: 2 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHGYTVF*CKYQTH
Trigger: ATGTGTCTGGTATTTACAGCAAAATACTGTGTATCC...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR TCA 72 bp TTATGTCCATGTTTGCACATACTCGTCCACTGTGTGTaGTCACCTGAAGGAGACATTGTGCATCTTAGTTTG +
Preference number: 3 (lower is better)
Translates to: LCPCLHILVHCV*SPEGDIVHLSL
Trigger: CAAACTAAGATGCACAATGTCTCCTTCAGGTGATCACACACAGTGGACGAGTATGTGCAAACATGGACATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR TCA 72 bp ACAGCTATCTTAAGTTCAGCTCTCAACATTGCTGGTTaGGTTTGGAACCAAAACCTCTTAACAACTGGCAGA +
Preference number: 3 (lower is better)
Translates to: TAILSSALNIAG*VWNQNLLTTGR
Trigger: TCTGCCAGTTGTTAAGAGGTTTTGGTTCCAAACTCAACCAGCAATGTTGAGAGCTGAACTTAAGATAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR GCA 72 bp ATTGTACCAAGCCCTGAGCACACTAGATTCTTTGTATaGTTTACTAACCTTACGTTAAGCACATCCACTGGT +
Preference number: 3 (lower is better)
Translates to: IVPSPEHTRFFV*FTNLTLSTSTG
Trigger: ACCAGTGGATGTGCTTAACGTAAGGTTAGTAAAGCATACAAAGAATCTAGTGTGCTCAGGGCTTGGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCACCTGAAGGAGACATaGTGCATCTTAGTTTGGGGT +
Preference number: 3 (lower is better)
Translates to: SNNILVSELASLSLYQSLHLKET*CILVWG
Trigger: ACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGGTTCAGCTCTCAACATaGCTGGTTGAGTTTGGAACC +
Preference number: 3 (lower is better)
Translates to: SNNILVSELASLSLYQSLVQLST*LVEFGT
Trigger: GGTTCCAAACTCAACCAGCAATGTTGAGAGCTGAAC...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR CCA 72 bp TGTGATCACCTGAAGGAGACATTGTGCATCTTAGTTTaGGGTTATATAATTACAAAGATGACCCTGTGCAAG +
Preference number: 3 (lower is better)
Translates to: CDHLKETLCILV*GYIITKMTLCK
Trigger: CTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTGATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGACACAGTCTTTACATTaGATGCAAACAGGACAGCTT +
Preference number: 3 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGTQSLH*MQTGQL
Trigger: AAGCTGTCCTGTTTGCATCAAATGTAAAGACTGTGT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTATTATGTCCATGTTaGCACATACTCGTCCACTGT +
Preference number: 3 (lower is better)
Translates to: SNNILVSELASLSLYQSLLLCPC*HILVHC
Trigger: ACAGTGGACGAGTATGTGCAAACATGGACATAATAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR CAA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACCTATTATGTCCATGTTaGCACATACTCGTCCACTGT +
Preference number: 3 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHLLCPC*HILVHC
Trigger: ACAGTGGACGAGTATGTGCAAACATGGACATAATAG...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACACACAGTCTTTACATTaGATGCAAACAGGACAGCTT +
Preference number: 3 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDTQSLH*MQTGQL
Trigger: AAGCTGTCCTGTTTGCATCAAATGTAAAGACTGTGT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGGAAGAAATATTTTCTTaGGGACAGCTGCTATCTAGA +
Preference number: 3 (lower is better)
Translates to: SNNILVSELASLSLYQSLEEIFS*GQLLSR
Trigger: TCTAGATAGCAGCTGTCCCAAAGAAAATATTTCTTC...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACCGCAGGTGGGAAATaGCGGCGGCACACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTAGGK*RRHTGH
Trigger: ATGCCCTGTGTGCCGCCGTCATTTCCCACCTGCGGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACCCTCCTGCTGGTTTaGGCCAGACAGCCTTACCAG +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTLLLV*ARQPYQ
Trigger: CTGGTAAGGCTGTCTGGCCCAAACCAGCAGGAGGGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGACCGCAGGTGGGAAATaGCGGCGGCACACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLTAGGK*RRHTGH
Trigger: ATGCCCTGTGTGCCGCCGTCATTTCCCACCTGCGGT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCCTCGTCCACTGTGTGTaGTCACCTGAAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPLVHCV*SPEGDI
Trigger: AATGTCTCCTTCAGGTGATCACACACAGTGGACGAG...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACGCCTTACCAGATTCTTaGTCCATTGCTGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHALPDS*SIAAGS
Trigger: GGAGCCAGCAGCAATGGACCAAGAATCTGGTAAGGC...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCCTTGCCTTCCTGCTGTaGCTCCACTTTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPLAFLL*LHFLMS
Trigger: TGACATCAGAAAGTGGAGCCACAGCAGGAAGGCAAG...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCCTGTGTGTGATCACCTaGAGGAGACATTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPLCVIT*RRHCAS
Trigger: AGATGCACAATGTCTCCTTCAGGTGATCACACACAG...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGGAAGATTCCGAAATGTaGAGCGGCTCCGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGEDSEM*SGSGAR
Trigger: TCTCGCTCCGGAGCCGCTGCACATTTCGGAATCTTC...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361189.7
CDS-3UTR CCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGACCCTCCTGCTGGTTTaGGCCAGACAGCCTTACCAG +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLTLLLV*ARQPYQ
Trigger: CTGGTAAGGCTGTCTGGCCCAAACCAGCAGGAGGGT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACCTGCCTTCCTCACTGTaGTGTACTGCAACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHLPSSL*CTATKD
Trigger: ATCCTTTGTTGCAGTACATCACAGTGAGGAAGGCAG...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACGGCTGCATCTTCAGGTaGATGTTCTGTCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHGCIFR*MFCLSF
Trigger: GAAAGACAGACAGAACATTCACCTGAAGATGCAGCC...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCGTACCAGAAAATCGATaGGGCAAAGAAGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPVPENR*GKEADH
Trigger: ATGGTCTGCTTCTTTGCCTCATCGATTTTCTGGTAC...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCCTCAACATTGCTGGTTaGGTTTGGAACCAAAACCTC +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPLNIAG*VWNQNL
Trigger: GAGGTTTTGGTTCCAAACTCAACCAGCAATGTTGAG...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCTGCCTGTAATTGTCTaGTACCCTCCTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLPVIV*YPPAGL
Trigger: CAAACCAGCAGGAGGGTATCAGACAATTACAGGCAG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCGGTTTGATTCAATGCTaGACCACAAGTGGGAATTTC +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPGLIQC*TTSGNF
Trigger: GAAATTCCCACTTGTGGTTCAGCATTGAATCAAACC...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACCTGCTCTCAGTGGTTTaGTTCAATGCTGAACCACAA +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHLLSVV*FNAEPQ
Trigger: TTGTGGTTCAGCATTGAATCAAACCACTGAGAGCAG...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCTGTTACCATCCAACATaGAAGCTGGCTGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPCYHPT*KLAVQI
Trigger: AATTTGCACAGCCAGCTTTCATGTTGGATGGTAACA...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACAGATTCTTGGTCCATTaGTGCTGGCTCCTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHRFLVH*CWLLFS
Trigger: ACTGAAAAGGAGCCAGCAGCAATGGACCAAGAATCT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACCATGAAAGCTGGCTGTaGAAATTCATTGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHHESWL*KFIGRF
Trigger: GAACCTGCCAATGAATTTGCACAGCCAGCTTTCATG...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACGGAAGGAGCTGCAGATaGTTCAATAACCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHGRSCR*FNNRRW
Trigger: CCACCTGCGGTTATTGAAGCATCTGCAGCTCCTTCC...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGGGAAGGAGCTGCAGATaGTTCAATAACCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLGRSCR*FNNRRW
Trigger: CCACCTGCGGTTATTGAAGCATCTGCAGCTCCTTCC...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGGCCTTACCAGATTCTTaGTCCATTGCTGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLALPDS*SIAAGS
Trigger: GGAGCCAGCAGCAATGGACCAAGAATCTGGTAAGGC...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACAGCACTACAAGCTCCTaGAATATACTCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHSTTSS*NILSLR
Trigger: TCTGAGGGAGAGTATATTCCAGGAGCTTGTAGTGCT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACAGTCTTCACTCACACTaGAGTCATCCTCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHSLHSH*SHPPGY
Trigger: ATAACCTGGAGGATGACTCCAGTGTGAGTGAAGACT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGGCAGTCTCCATAGCCTaGGCTAAGCGTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGAVSIA*AKRSSS
Trigger: ACTAGAAGAACGCTTAGCCCAGGCTATGGAGACTGC...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTCAATAACCGCAGGTaGGAAATGACGGCGGCACAC +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDFNNRR*EMTAAH
Trigger: GTGTGCCGCCGTCATTTCCCACCTGCGGTTATTGAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR CAA 72 bp AACAGCTATCTTAAGTTCAGCTCTCAACATTGCTGGTaGAGTTTGGAACCAAAACCTCTTAACAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: NSYLKFSSQHCW*SLEPKPLNNWQ
Trigger: CTGCCAGTTGTTAAGAGGTTTTGGTTCCAAACTCAACCAGCAATGTTGAGAGCTGAACTTAAGATAGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTGCCTGTAATTGTCTaGTACCCTCCTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLPVIV*YPPAGL
Trigger: CAAACCAGCAGGAGGGTATCAGACAATTACAGGCAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGGGCTGCATCTTCAGGTaGATGTTCTGTCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGGCIFR*MFCLSF
Trigger: GAAAGACAGACAGAACATTCACCTGAAGATGCAGCC...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACTTGGTCCACCTGGCTTaGACTTATCAGTTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHLVHLA*TYQFSN
Trigger: GTTAGAAAACTGATAAGTTCAAGCCAGGTGGACCAA...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACGTCTGTTCCCCTTCCTaGAGAGATAATTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHVCSPS*RDNSWF
Trigger: AAACCAAGAATTATCTCTTCAGGAAGGGGAACAGAC...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTCGTCCACTGTGTGTaGTCACCTGAAGGAGACATT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLVHCV*SPEGDI
Trigger: AATGTCTCCTTCAGGTGATCACACACAGTGGACGAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGGTAGGGAGCCAAGAATaGAGGACAGTAACAGATGGA +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGVGSQE*RTVTDG
Trigger: TCCATCTGTTACTGTCCTTCATTCTTGGCTCCCTAC...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCGATTTACACAGAAAATaGTGGGCTGGGGTTATAGAA +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPDLHRK*WAGVIE
Trigger: TTCTATAACCCCAGCCCATCATTTTCTGTGTAAATC...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCCAACAAAGGATTGACTaGTCTCAGTGGTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPQQRID*SQWFDS
Trigger: TGAATCAAACCACTGAGAGCAGTCAATCCTTTGTTG...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCTTCTTCAGGGCCACTaGTATCACTTTGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLLQGH*YHFVAQ
Trigger: CTGAGCTACAAAGTGATAGCAGTGGCCCTGAAGAAG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACAAAGATGACCCTGTaGAAGTTTTCAGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTKMTL*KFSDLP
Trigger: TGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACTTCAGCTCTCAACATTaGTGGTTGAGTTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHFSSQH*WLSLEP
Trigger: TGGTTCCAAACTCAACCAGCAATGTTGAGAGCTGAA...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCATTGACTGCTCTCAGTaGTTTGATTCAATGCTGAAC +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPIDCSQ*FDSMLN
Trigger: GTTCAGCATTGAATCAAACCACTGAGAGCAGTCAAT...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGACTACAAATATGCCCTaGACCACAGGCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGTTNMP*TTGCIF
Trigger: GAAGATGCAGCCTGTGGTCCAGGGCATATTTGTAGT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCTCAGGAGAACTTCCATaGTTCTTTTCCCTATCATTG +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPSGELP*FFSLSL
Trigger: CAATGATAGGGAAAAGAACCATGGAAGTTCTCCTGA...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACCAGTTTTCTAACTTTTaGCCTCACTACCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHQFSNF*PHYLFR
Trigger: CCTGAACAGGTAGTGAGGCCAAAAGTTAGAAAACTG...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTTGCCTTCCTGCTGTaGCTCCACTTTCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLAFLL*LHFLMS
Trigger: TGACATCAGAAAGTGGAGCCACAGCAGGAAGGCAAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACATCCAACATGAAAGCTaGCTGTGCAAATTCATTGGC +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHIQHES*LCKFIG
Trigger: GCCAATGAATTTGCACAGCCAGCTTTCATGTTGGAT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAGCAGTCTCCATAGCCTaGGCTAAGCGTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRAVSIA*AKRSSS
Trigger: ACTAGAAGAACGCTTAGCCCAGGCTATGGAGACTGC...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCTGCTCTCAGTGGTTTaGTTCAATGCTGAACCACAA +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLLSVV*FNAEPQ
Trigger: TTGTGGTTCAGCATTGAATCAAACCACTGAGAGCAG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTGCCTTCCTCACTGTaGTGTACTGCAACAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLPSSL*CTATKD
Trigger: ATCCTTTGTTGCAGTACATCACAGTGAGGAAGGCAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGTCCATTTTGGACACTTaGAGCACTACAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLSILDT*STTSSW
Trigger: CCAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGA...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTCCATTTTGGACACTTaGAGCACTACAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHSILDT*STTSSW
Trigger: CCAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACATTTCCTGGCTATTCTaGTGGACAAACTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHISWLF*WTNSVS
Trigger: TGATACTGAGTTTGTCCATCAGAATAGCCAGGAAAT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGGCCTCTCTCCATCTTTaGACACTTCTTTGTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLASLHL*TLLCFA
Trigger: GGCGAAACAAAGAAGTGTTCAAAGATGGAGAGAGGC...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACTGTGGCTCCACTTTCTaGTGTCATTTGGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHCGSTF*CHLVIF
Trigger: GAAAATAACCAAATGACATCAGAAAGTGGAGCCACA...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGATGCAATACTGTCATTTaGAGGTGGGGCATCAGGATC +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRCNTVI*RWGIRI
Trigger: GATCCTGATGCCCCACCTTCAAATGACAGTATTGCA...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCAGTAAGTGTCACAACTaGTCAACAGTACTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPSKCHN*STVLKR
Trigger: CCTTTTAAGTACTGTTGATCAGTTGTGACACTTACT...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACGTAGGGAGCCAAGAATaGAGGACAGTAACAGATGGA +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDVGSQE*RTVTDG
Trigger: TCCATCTGTTACTGTCCTTCATTCTTGGCTCCCTAC...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCTTAGACCTGGGCTTTTaGAAAACTTGCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPLDLGF*KTCIPF
Trigger: AAATGGAATGCAAGTTTTTCAAAAGCCCAGGTCTAA...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTTCTTGGTCCATTGCTaGTGGCTCCTTTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGFLVHC*WLLFSV
Trigger: TACACTGAAAAGGAGCCAGCAGCAATGGACCAAGAA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCGTCTGTATGAACCAATaGAATTCCATTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPVCMNQ*NSILDT
Trigger: AGTGTCCAAAATGGAATTGCATTGGTTCATACAGAC...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACACCAGTGTATGCCTCTaGCTCTCTGTTTTCCAACTC +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDTSVCL*LSVFQL
Trigger: GAGTTGGAAAACAGAGAGGCAGAGGCATACACTGGT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACACCAGTGTATGCCTCTaGCTCTCTGTTTTCCAACTC +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHTSVCL*LSVFQL
Trigger: GAGTTGGAAAACAGAGAGGCAGAGGCATACACTGGT...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGATGTTCACTACAAATATaGCCTGGACCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRCSLQI*PGPQAA
Trigger: TGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACA...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTGTTCACTACAAATATaGCCTGGACCACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHCSLQI*PGPQAA
Trigger: TGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACCTTCTTCAGGGCCACTaGTATCACTTTGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHLLQGH*YHFVAQ
Trigger: CTGAGCTACAAAGTGATAGCAGTGGCCCTGAAGAAG...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCACTAAAGAAAATGGATaGACTGTCTCAACATTCAGC +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPTKENG*TVSTFS
Trigger: GCTGAATGTTGAGACAGTGCATCCATTTTCTTTAGT...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACTCCATGTTTGCCATCTaGATCATAAGAGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHSMFAI*IIRVCM
Trigger: CATACAGACTCTTATGATCCAGATGGCAAACATGGA...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACACTACAAATATGCCCTaGACCACAGGCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHTTNMP*TTGCIF
Trigger: GAAGATGCAGCCTGTGGTCCAGGGCATATTTGTAGT...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTCACTGCAACAGATTaGACAGCATTGTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLTATD*TALFLT
Trigger: GGTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
3UTR CAA 72 bp TACTCGTCCACTGTGTGTGATCACCTGAAGGAGACATaGTGCATCTTAGTTTGGGGTTATATAATTACAAAG +
Preference number: 4 (lower is better)
Translates to: YSSTVCDHLKET*CILVWGYIITK
Trigger: CTTTGTAATTATATAACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTGATCACACACAGTGGACGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACCAAAGGACTGGAACCTaGGGAATTTTCCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHQRTGT*GIFLWN
Trigger: GTTCCAAAGGAAAATTCCTCAGGTTCCAGTCCTTTG...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACTTCTGCAGAAAGTTaGAGATGGTCATTATCTTCT +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTSAES*RWSLSS
Trigger: AGAAGATAATGACCATCTTCAACTTTCTGCAGAAGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACGTACCAGAAAATCGATaGGGCAAAGAAGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHVPENR*GKEADH
Trigger: ATGGTCTGCTTCTTTGCCTCATCGATTTTCTGGTAC...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGGTCTGTTCCCCTTCCTaGAGAGATAATTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGVCSPS*RDNSWF
Trigger: AAACCAAGAATTATCTCTTCAGGAAGGGGAACAGAC...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTGTTACCATCCAACATaGAAGCTGGCTGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGCYHPT*KLAVQI
Trigger: AATTTGCACAGCCAGCTTTCATGTTGGATGGTAACA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTGAGGATCCACATATaGAATAGCTTCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDLRIHI*NSFSNS
Trigger: GGAGTTGCTGAAGCTATTTCATATGTGGATCCTCAG...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTCAACATTGCTGGTTaGGTTTGGAACCAAAACCTC +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLNIAG*VWNQNL
Trigger: GAGGTTTTGGTTCCAAACTCAACCAGCAATGTTGAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTTCTTGGTCCATTGCTaGTGGCTCCTTTTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHFLVHC*WLLFSV
Trigger: TACACTGAAAAGGAGCCAGCAGCAATGGACCAAGAA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACAGATTCTTGGTCCATTaGTGCTGGCTCCTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHRFLVH*CWLLFS
Trigger: ACTGAAAAGGAGCCAGCAGCAATGGACCAAGAATCT...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCTCACTGTGATGTACTaGAACAAAGGATTGACTGCT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLTVMY*NKGLTA
Trigger: AGCAGTCAATCCTTTGTTGCAGTACATCACAGTGAG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGATTCCTAAGGTATCCCTaGCTTCCTCACTGTGATGTA +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRFLRYP*LPHCDV
Trigger: TACATCACAGTGAGGAAGGCAGGGATACCTTAGGAA...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTCCTAAGGTATCCCTaGCTTCCTCACTGTGATGTA +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDFLRYP*LPHCDV
Trigger: TACATCACAGTGAGGAAGGCAGGGATACCTTAGGAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACTATCTTCTCCATGTTTaGCATCTGGATCATAAGAGT +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHYLLHV*HLDHKS
Trigger: ACTCTTATGATCCAGATGGCAAACATGGAGAAGATA...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAACCTTCCACGACTTCTaGAGAAAGTTGAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRTFHDF*RKLKMV
Trigger: GACCATCTTCAACTTTCTGCAGAAGTCGTGGAAGGT...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCATGAAAGCTGGCTGTaGAAATTCATTGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDHESWL*KFIGRF
Trigger: GAACCTGCCAATGAATTTGCACAGCCAGCTTTCATG...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGACAAAGATGACCCTGTaGAAGTTTTCAGACCTTCCA +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGTKMTL*KFSDLP
Trigger: TGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAAGCACTACAAGCTCCTaGAATATACTCTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRSTTSS*NILSLR
Trigger: TCTGAGGGAGAGTATATTCCAGGAGCTTGTAGTGCT...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCAATGCAATTCCATTTTaGACACTTGAAGCACTACAA +
Preference number: 4 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPNAIPF*TLEALQ
Trigger: TTGTAGTGCTTCAAGTGTCCAAAATGGAATTGCATT...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCAGTTTTCTAACTTTTaGCCTCACTACCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGQFSNF*PHYLFR
Trigger: CCTGAACAGGTAGTGAGGCCAAAAGTTAGAAAACTG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAAGTCTTCACTCACACTaGAGTCATCCTCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRSLHSH*SHPPGY
Trigger: ATAACCTGGAGGATGACTCCAGTGTGAGTGAAGACT...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGAAAGAAGAATCAACTTaGTCCAAAGGACTGGAACCT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGKEEST*SKGLEP
Trigger: AGGTTCCAGTCCTTTGGATCAAGTTGATTCTTCTTT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTGGTCCACCTGGCTTaGACTTATCAGTTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDLVHLA*TYQFSN
Trigger: GTTAGAAAACTGATAAGTTCAAGCCAGGTGGACCAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGACACTGCTGCTTTCATTaGCTTCATTGTACTGTAACC +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRHCCFH*LHCTVT
Trigger: GGTTACAGTACAATGAAGTCAATGAAAGCAGCAGTG...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCACTGCTGCTTTCATTaGCTTCATTGTACTGTAACC +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLHCCFH*LHCTVT
Trigger: GGTTACAGTACAATGAAGTCAATGAAAGCAGCAGTG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACCTCACTGTGATGTACTaGAACAAAGGATTGACTGCT +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHLTVMY*NKGLTA
Trigger: AGCAGTCAATCCTTTGTTGCAGTACATCACAGTGAG...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACTCAAATACTGTATTaGCTAATGATTCCTGGTATC +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTQILY*LMIPGI
Trigger: GATACCAGGAATCATTAGGCAATACAGTATTTGAGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACAGGGCAACTCTGTTaGTATATCATCCTTAATATA +
Preference number: 4 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTGQLC*YIILNI
Trigger: TATATTAAGGATGATATAGCAACAGAGTTGCCCTGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTGTCAAGGTTTAGGGTaGTTCTGCAATACTGTCATT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGCQGLG*FCNTVI
Trigger: AATGACAGTATTGCAGAAGCACCCTAAACCTTGACA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACCTTGATCCAAAGGACTaGAACCTGAGGAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHLDPKD*NLRNFP
Trigger: AGGAAAATTCCTCAGGTTCCAGTCCTTTGGATCAAG...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGACTTGATCCAAAGGACTaGAACCTGAGGAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRLDPKD*NLRNFP
Trigger: AGGAAAATTCCTCAGGTTCCAGTCCTTTGGATCAAG...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGATTGCCTAATGATTCCTaGTATCTACTACCTTCCACG +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRLPNDS*YLLPST
Trigger: CGTGGAAGGTAGTAGATACCAGGAATCATTAGGCAA...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGTTGCCTAATGATTCCTaGTATCTACTACCTTCCACG +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLPNDS*YLLPST
Trigger: CGTGGAAGGTAGTAGATACCAGGAATCATTAGGCAA...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTTAAAACCTGTTTCTTaGTCCACCTGGCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLKPVS*STWLEL
Trigger: AAGTTCAAGCCAGGTGGACCAAGAAACAGGTTTTAA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAATCCAACATGAAAGCTaGCTGTGCAAATTCATTGGC +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRIQHES*LCKFIG
Trigger: GCCAATGAATTTGCACAGCCAGCTTTCATGTTGGAT...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGAAAGAAGAATCAACTTaGTCCAAAGGACTGGAACCT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLKEEST*SKGLEP
Trigger: AGGTTCCAGTCCTTTGGATCAAGTTGATTCTTCTTT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGACTTCTGCAGAAAGTTaGAGATGGTCATTATCTTCT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGTSAES*RWSLSS
Trigger: AGAAGATAATGACCATCTTCAACTTTCTGCAGAAGT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACATTTCCTGGCTATTCTaGTGGACAAACTCAGTATCA +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDISWLF*WTNSVS
Trigger: TGATACTGAGTTTGTCCATCAGAATAGCCAGGAAAT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGTGTGGCTCCACTTTCTaGTGTCATTTGGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLCGSTF*CHLVIF
Trigger: GAAAATAACCAAATGACATCAGAAAGTGGAGCCACA...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCCAGCTTTCATCACTTaGGGATTGATCTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLPAFIT*GLIFFC
Trigger: ACAGAAAAAGATCAATCCTCAAGTGATGAAAGCTGG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGGATTTACACAGAAAATaGTGGGCTGGGGTTATAGAA +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLDLHRK*WAGVIE
Trigger: TTCTATAACCCCAGCCCATCATTTTCTGTGTAAATC...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCTTTGTTTCGCCTCATaGCTATTAAAACCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLCFAS*LLKPVS
Trigger: AGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTGTCAAGGTTTAGGGTaGTTCTGCAATACTGTCATT +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDCQGLG*FCNTVI
Trigger: AATGACAGTATTGCAGAAGCACCCTAAACCTTGACA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTATTATGTCCATGTTTaGACATACTCGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDYYVHV*TYSSTV
Trigger: CACAGTGGACGAGTATGTGCAAACATGGACATAATA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTTTCTTTGGGACAGCTaGTATCTAGAAGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGFLWDS*YLEENQ
Trigger: TTGGTTTTCTTCTAGATAGCAGCTGTCCCAAAGAAA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACATTGACTGCTCTCAGTaGTTTGATTCAATGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDIDCSQ*FDSMLN
Trigger: GTTCAGCATTGAATCAAACCACTGAGAGCAGTCAAT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGATCCATGTTTGCCATCTaGATCATAAGAGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRSMFAI*IIRVCM
Trigger: CATACAGACTCTTATGATCCAGATGGCAAACATGGA...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGATCAGGAGAACTTCCATaGTTCTTTTCCCTATCATTG +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRSGELP*FFSLSL
Trigger: CAATGATAGGGAAAAGAACCATGGAAGTTCTCCTGA...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAGTTTCTTGGTCCACCTaGCTTGAACTTATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRVSWST*LELISF
Trigger: AAAACTGATAAGTTCAAGCCAGGTGGACCAAGAAAC...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTAAAACCTGTTTCTTaGTCCACCTGGCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDLKPVS*STWLEL
Trigger: AAGTTCAAGCCAGGTGGACCAAGAAACAGGTTTTAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACAGCTCTCAACATTGCTaGTTGAGTTTGGAACCAAAA +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHSSQHC*LSLEPK
Trigger: TTTTGGTTCCAAACTCAACCAGCAATGTTGAGAGCT...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR TCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTAGACCTGGGCTTTTaGAAAACTTGCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDLDLGF*KTCIPF
Trigger: AAATGGAATGCAAGTTTTTCAAAAGCCCAGGTCTAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAGTCTGTATGAACCAATaGAATTCCATTTTGGACACT +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRVCMNQ*NSILDT
Trigger: AGTGTCCAAAATGGAATTGCATTGGTTCATACAGAC...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTATCTTCTCCATGTTTaGCATCTGGATCATAAGAGT +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHYLLHV*HLDHKS
Trigger: ACTCTTATGATCCAGATGGCAAACATGGAGAAGATA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGACTCAAATACTGTATTaGCTAATGATTCCTGGTATC +
Preference number: 4 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGTQILY*LMIPGI
Trigger: GATACCAGGAATCATTAGGCAATACAGTATTTGAGT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCTTTGTTTCGCCTCATaGCTATTAAAACCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLLCFAS*LLKPVS
Trigger: AGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGAATATTAAACAAATGTaGCATGAGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLNIKQM*HECSGP
Trigger: AGGCCCAGAACACTCATGGCACATTTGTTTAATATT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACAATATTAAACAAATGTaGCATGAGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHNIKQM*HECSGP
Trigger: AGGCCCAGAACACTCATGGCACATTTGTTTAATATT...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTTCTTTGGGACAGCTaGTATCTAGAAGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDFLWDS*YLEENQ
Trigger: TTGGTTTTCTTCTAGATAGCAGCTGTCCCAAAGAAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACACAGGGCAACTCTGTTaGTATATCATCCTTAATATA +
Preference number: 4 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDTGQLC*YIILNI
Trigger: TATATTAAGGATGATATAGCAACAGAGTTGCCCTGT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGGGATACACAGTATTTTaGTGTAAATACCAGACACAT +
Preference number: 4 (lower is better)
Translates to: SNNILVSELASLSLYQSLGYTVF*CKYQTH
Trigger: ATGTGTCTGGTATTTACAGCAAAATACTGTGTATCC...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR GCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAGGATACACAGTATTTTaGTGTAAATACCAGACACAT +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRGYTVF*CKYQTH
Trigger: ATGTGTCTGGTATTTACAGCAAAATACTGTGTATCC...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACATGTCTGGTCATACATaGTTTAAAACTGACATAAGC +
Preference number: 4 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHMSGHT*FKTDIS
Trigger: GCTTATGTCAGTTTTAAACCATGTATGACCAGACAT...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CCA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGAAATGCAATTCCATTTTaGACACTTGAAGCACTACAA +
Preference number: 4 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRNAIPF*TLEALQ
Trigger: TTGTAGTGCTTCAAGTGTCCAAAATGGAATTGCATT...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 90 bp TTAAAGGTGCATCTGCAAGAGGAGCTCTGGCCTGACATCGCTAACTaGGAGCAGCCCTGGCGGAAAGGTGCTGATCCCGGGAGTAGAGCG +
Preference number: 5 (lower is better)
Translates to: LKVHLQEELWPDIAN*EQPWRKGADPGSRA
Trigger: CGCTCTACTCCCGGGATCAGCACCTTTCCGCCAGGGCTGCTCTCAGTTAGCGATGTCAGGCCAGAGCTCCTCTTGCAGATGCACCTTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511624.1
ENST00000512822.1
CDS GCA 90 bp AGTTTTTATTCACACTATGGACAAGCCGCAGAAGATTCCGAAATGTaGAGCGGCTCCGGAGCGAGAACAGCGCTCGAACCTCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: SFYSHYGQAAEDSEM*SGSGARTALEPPPA
Trigger: GGCGGGTGGAGGTTCGAGCGCTGTTCTCGCTCCGGAGCCGCTGCACATTTCGGAATCTTCTGCGGCTTGTCCATAGTGTGAATAAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361189.7
CDS GCA 90 bp GTCATCCTCCAGGTTATTGTTACCATCCAACATGAAAGCTGGCTGTaGAAATTCATTGGCAGGTTCATTTCCCTCATCACTGCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: VILQVIVTIQHESWL*KFIGRFISLITAAF
Trigger: GAAAGCAGCAGTGATGAGGGAAATGAACCTGCCAATGAATTTGCACAGCCAGCTTTCATGTTGGATGGTAACAATAACCTGGAGGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACAGCCTTACCAGATTCTaGGTCCATTGCTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHSLTRF*VHCCWL
Trigger: GAGCCAGCAGCAATGGACCAAGAATCTGGTAAGGCT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGGGTGTTATCCACCTCTaGCCTTCCTGCTGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGGVIHL*PSCCGS
Trigger: GGAGCCACAGCAGGAAGGCAAGAGGTGGATAACACC...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 90 bp ACCAGATTCTTGGTCCATTGCTGCTGGCTCCTTTTCAGTGTACTGTaGCATATATGGCAGCGTCTGTGTGACCAGTTCAGTAGAATTATA +
Preference number: 5 (lower is better)
Translates to: TRFLVHCCWLLFSVL*HIWQRLCDQFSRII
Trigger: TATAATTCTACTGAACTGGTCACACAGACGCTGCCATATATGTCACAGTACACTGAAAAGGAGCCAGCAGCAATGGACCAAGAATCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000511624.1
CDS GCA 90 bp CCTCAGAGTGATTATGAAGATTTGTACTGCTTCCTAAGGTATCCCTaGCTTCCTCACTGTGATGTACTGCAACAAAGGATTGACTGCTCT +
Preference number: 5 (lower is better)
Translates to: PQSDYEDLYCFLRYP*LPHCDVLQQRIDCS
Trigger: AGAGCAGTCAATCCTTTGTTGCAGTACATCACAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATCACTCTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 90 bp CTCCTGGAATATACTCTCCCTCAGAGTGATTATGAAGATTTGTACTaGTTCCTAAGGTATCCCTGCCTTCCTCACTGTGATGTACTGCAA +
Preference number: 5 (lower is better)
Translates to: LLEYTLPQSDYEDLY*FLRYPCLPHCDVLQ
Trigger: TTGCAGTACATCACAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATCACTCTGAGGGAGAGTATATTCCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 90 bp CAGTGTATGCCTCTGCCTCTCTGTTTTCCAACTCAAATACTGTATTaGCTAATGATTCCTGGTATCTACTACCTTCCACGACTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: QCMPLPLCFPTQILY*LMIPGIYYLPRLLQ
Trigger: CTGCAGAAGTCGTGGAAGGTAGTAGATACCAGGAATCATTAGGCAATACAGTATTTGAGTTGGAAAACAGAGAGGCAGAGGCATACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGTACCCTCCTGCTGGTTaGGGCCAGACAGCCTTACCA +
Preference number: 5 (lower is better)
Translates to: SNNILVSELASLSLYQSLYPPAG*GQTALP
Trigger: TGGTAAGGCTGTCTGGCCCAAACCAGCAGGAGGGTA...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTACCCTCCTGCTGGTTaGGGCCAGACAGCCTTACCA +
Preference number: 5 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHYPPAG*GQTALP
Trigger: TGGTAAGGCTGTCTGGCCCAAACCAGCAGGAGGGTA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACGGTGTTATCCACCTCTaGCCTTCCTGCTGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDGVIHL*PSCCGS
Trigger: GGAGCCACAGCAGGAAGGCAAGAGGTGGATAACACC...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACTTACTAGCTGGTGGATaGGCCACCTCAACATCCACT +
Preference number: 5 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHLLAGG*ATSTST
Trigger: AGTGGATGTTGAGGTGGCCAATCCACCAGCTAGTAA...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCACTCACTGCAACAGATaGGACAGCATTGTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPTHCNR*DSIVPD
Trigger: GTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAGT...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 90 bp CCATGGTTCTTTTCCCTATCATTGGTATTTTGTTCACTACAAATATaGCCTGGACCACAGGCTGCATCTTCAGGTGAATGTTCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: PWFFSLSLVFCSLQI*PGPQAASSGECSVC
Trigger: ACAGACAGAACATTCACCTGAAGATGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAAAGAACCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 90 bp CTTCCTCACTGTGATGTACTGCAACAAAGGATTGACTGCTCTCAGTaGTTTGATTCAATGCTGAACCACAAGTGGGAATTTCTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: LPHCDVLQQRIDCSQ*FDSMLNHKWEFLFH
Trigger: GTGAAACAGAAATTCCCACTTGTGGTTCAGCATTGAATCAAACCACTGAGAGCAGTCAATCCTTTGTTGCAGTACATCACAGTGAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCTACTGCAACAAAGGATaGACTGCTCTCAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPYCNKG*TALSGL
Trigger: CAAACCACTGAGAGCAGTCAATCCTTTGTTGCAGTA...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGAGCCTTACCAGATTCTaGGTCCATTGCTGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SNNILVSELASLSLYQSLSLTRF*VHCCWL
Trigger: GAGCCAGCAGCAATGGACCAAGAATCTGGTAAGGCT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACTACTGCAACAAAGGATaGACTGCTCTCAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHYCNKG*TALSGL
Trigger: CAAACCACTGAGAGCAGTCAATCCTTTGTTGCAGTA...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTTACTAGCTGGTGGATaGGCCACCTCAACATCCACT +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLLAGG*ATSTST
Trigger: AGTGGATGTTGAGGTGGCCAATCCACCAGCTAGTAA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCTCTCAACATTGCTGGTaGAGTTTGGAACCAAAACCT +
Preference number: 5 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPSQHCW*SLEPKP
Trigger: AGGTTTTGGTTCCAAACTCAACCAGCAATGTTGAGA...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 90 bp TTGTTCACTACAAATATGCCCTGGACCACAGGCTGCATCTTCAGGTaGATGTTCTGTCTGTCTTTCCTGGCTAGTATTATTTTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: LFTTNMPWTTGCIFR*MFCLSFLASIILLF
Trigger: AAACAACAAAATAATACTAGCCAGGAAAGACAGACAGAACATTCACCTGAAGATGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GAGGTTAGAAAGAGTTTCATAAGGCCATCTAATTCAGCTCATTGTACCAAGCCCTCTTTGAACACTTCTTaGTTTCGCCTCATGCCTATT +
Preference number: 5 (lower is better)
Translates to: EVRKSFIRPSNSAHCTKPSLNTS*FRLMPI
Trigger: AATAGGCATGAGGCGAAACAAAGAAGTGTTCAAAGA...GGGCTTGGTACAATGAGCTGAATTAGATGGCCTTATGAAACTCTTTCTAACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGACTCACTGCAACAGATaGGACAGCATTGTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGTHCNR*DSIVPD
Trigger: GTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAGT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 90 bp ATCATAAGAGTCTGTATGAACCAATGCAATTCCATTTTGGACACTTaGAGCACTACAAGCTCCTGGAATATACTCTCCCTCAGAGTGATT +
Preference number: 5 (lower is better)
Translates to: IIRVCMNQCNSILDT*STTSSWNILSLRVI
Trigger: AATCACTCTGAGGGAGAGTATATTCCAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGAATTGCATTGGTTCATACAGACTCTTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 90 bp CGACTTCTGCAGAAAGTTGAAGATGGTCATTATCTTCTCCATGTTTaGCATCTGGATCATAAGAGTCTGTATGAACCAATGCAATTCCAT +
Preference number: 5 (lower is better)
Translates to: RLLQKVEDGHYLLHV*HLDHKSLYEPMQFH
Trigger: ATGGAATTGCATTGGTTCATACAGACTCTTATGATCCAGATGGCAAACATGGAGAAGATAATGACCATCTTCAACTTTCTGCAGAAGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 90 bp CAACTCTGTTGCTATATCATCCTTAATATACTCACTGCAACAGATTaGACAGCATTGTTCCTGACCAATAGCAGTGTGATCTTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: QLCCYIILNILTATD*TALFLTNSSVIFKN
Trigger: GTTCTTGAAGATCACACTGCTATTGGTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAGTATATTAAGGATGATATAGCAACAGAGTTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGAGCCTCTCTCCATCTTaGAACACTTCTTTGTTTCGC +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGSLSPS*NTSLFR
Trigger: GCGAAACAAAGAAGTGTTCAAAGATGGAGAGAGGCT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGACAGATTGGACAGCATaGTTCCTGACCAATAGCAGT +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGTDWTA*FLTNSS
Trigger: ACTGCTATTGGTCAGGAACAATGCTGTCCAATCTGT...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGACACCTGAAGGAGACATaGTGCATCTTAGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRHLKET*CILVWG
Trigger: ACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTG...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCACCTGAAGGAGACATaGTGCATCTTAGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDHLKET*CILVWG
Trigger: ACCCCAAACTAAGATGCACAATGTCTCCTTCAGGTG...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACGTTCAGCTCTCAACATaGCTGGTTGAGTTTGGAACC +
Preference number: 5 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHVQLST*LVEFGT
Trigger: GGTTCCAAACTCAACCAGCAATGTTGAGAGCTGAAC...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 90 bp TGCAGAAAGTTGAAGATGGTCATTATCTTCTCCATGTTTGCCATCTaGATCATAAGAGTCTGTATGAACCAATGCAATTCCATTTTGGAC +
Preference number: 5 (lower is better)
Translates to: CRKLKMVIIFSMFAI*IIRVCMNQCNSILD
Trigger: GTCCAAAATGGAATTGCATTGGTTCATACAGACTCTTATGATCCAGATGGCAAACATGGAGAAGATAATGACCATCTTCAACTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTCCATTTTGGACACTaGAAGCACTACAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDFHFGH*KHYKLL
Trigger: CAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTTCCATTTTGGACACTaGAAGCACTACAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHFHFGH*KHYKLL
Trigger: CAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGAA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACTAACCATTTCATCTaGAGAAGACCTCTGAATTTC +
Preference number: 5 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTNHFI*RRPLNF
Trigger: GAAATTCAGAGGTCTTCTCAAGATGAAATGGTTAGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGAGCCTCTCTCCATCTTaGAACACTTCTTTGTTTCGC +
Preference number: 5 (lower is better)
Translates to: SNNILVSELASLSLYQSLSLSPS*NTSLFR
Trigger: GCGAAACAAAGAAGTGTTCAAAGATGGAGAGAGGCT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCCCAGCTTTCATCACTaGAGGATTGATCTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGPSFHH*RIDLFL
Trigger: CAGAAAAAGATCAATCCTCAAGTGATGAAAGCTGGG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACACAGATTGGACAGCATaGTTCCTGACCAATAGCAGT +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDTDWTA*FLTNSS
Trigger: ACTGCTATTGGTCAGGAACAATGCTGTCCAATCTGT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACACTTTTGTAGCCAAATaGAGACACAAGGTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHTFVAK*RHKVCE
Trigger: TTCACAAACCTTGTGTCTCAATTTGGCTACAAAAGT...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCTATTATGTCCATGTTaGCACATACTCGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLLCPC*HILVHC
Trigger: ACAGTGGACGAGTATGTGCAAACATGGACATAATAG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GCATTTCCCAAGTCACAGAAGCCCCAAAGAACTCCTAAATTACAAATTCATCACGAAGAAATATTTTCTTaGGGACAGCTGCTATCTAGA +
Preference number: 5 (lower is better)
Translates to: AFPKSQKPQRTPKLQIHHEEIFS*GQLLSR
Trigger: TCTAGATAGCAGCTGTCCCAAAGAAAATATTTCTTC...GTGATGAATTTGTAATTTAGGAGTTCTTTGGGGCTTCTGTGACTTGGGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGCTGAGGAATTTTCCTTaGGAACATCATCTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGLRNFP*EHHLVP
Trigger: TGGAACTAGATGATGTTCCAAAGGAAAATTCCTCAG...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTCTTTGAACACTTCTTaGTTTCGCCTCATGCCTATT +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGSLNTS*FRLMPI
Trigger: AATAGGCATGAGGCGAAACAAAGAAGTGTTCAAAGA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGCCCAGCTTTCATCACTaGAGGATTGATCTTTTTCTG +
Preference number: 5 (lower is better)
Translates to: SNNILVSELASLSLYQSLPSFHH*RIDLFL
Trigger: CAGAAAAAGATCAATCCTCAAGTGATGAAAGCTGGG...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTCACTGCTGCTTTCATaGACTTCATTGTACTGTAAC +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGSLLLS*TSLYCN
Trigger: GTTACAGTACAATGAAGTCAATGAAAGCAGCAGTGA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGACTATTATGTCCATGTTaGCACATACTCGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRLLCPC*HILVHC
Trigger: ACAGTGGACGAGTATGTGCAAACATGGACATAATAG...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTCTCAACATTGCTGGTaGAGTTTGGAACCAAAACCT +
Preference number: 5 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHSQHCW*SLEPKP
Trigger: AGGTTTTGGTTCCAAACTCAACCAGCAATGTTGAGA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACATCTTTGTCATAGAGTaGGTAATAATCTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDIFVIE*VIISTA
Trigger: GGCTGTGGAGATTATTACCAACTCTATGACAAAGAT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGATCTTTGTCATAGAGTaGGTAATAATCTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: SNNILVSELASLSLYQSLIFVIE*VIISTA
Trigger: GGCTGTGGAGATTATTACCAACTCTATGACAAAGAT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACTCACTGCTGCTTTCATaGACTTCATTGTACTGTAAC +
Preference number: 5 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHSLLLS*TSLYCN
Trigger: GTTACAGTACAATGAAGTCAATGAAAGCAGCAGTGA...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp GTGGCTTATTATAGAGAAATCTTTAGCAACGTAAGTTTAACCAGTAAGTGTCACACACAGTCTTTACATTaGATGCAAACAGGACAGCTT +
Preference number: 5 (lower is better)
Translates to: VAYYREIFSNVSLTSKCHTQSLH*MQTGQL
Trigger: AAGCTGTCCTGTTTGCATCAAATGTAAAGACTGTGT...GTGACACTTACTGGTTAAACTTACGTTGCTAAAGATTTCTCTATAATAAGCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp CGGGATATAAATACTCAGAGAAATACACGAATAAGATGTAACTCTGCATTTGGGTTTAGACCTGGGCTTTaGAAAAACTTGCATTCCATT +
Preference number: 5 (lower is better)
Translates to: RDINTQRNTRIRCNSAFGFRPGL*KNLHSI
Trigger: AATGGAATGCAAGTTTTTCAAAAGCCCAGGTCTAAA...CCCAAATGCAGAGTTACATCTTATTCGTGTATTTCTCTGAGTATTTATATCCCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACACTAACCATTTCATCTaGAGAAGACCTCTGAATTTC +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDTNHFI*RRPLNF
Trigger: GAAATTCAGAGGTCTTCTCAAGATGAAATGGTTAGT...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACCTTCCAAAATACTGTAGACCTATCATTGGTATTTaGTTCACTACAAATATGCCC +
Preference number: 5 (lower is better)
Translates to: IITKMTLCKFSDLPKYCRPIIGI*FTTNMP
Trigger: GGGCATATTTGTAGTGAACAAAATACCAATGATAGG...TCTACAGTATTTTGGAAGGTCTGAAAACTTGCACAGGGTCATCTTTGTAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp TCAAATAATATTTTAGTATCTGAACTTGCCAGCCTTAGCTTATACCAGAGCTTGACTTTTGTAGCCAAATaGAGACACAAGGTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: SNNILVSELASLSLYQSLTFVAK*RHKVCE
Trigger: TTCACAAACCTTGTGTCTCAATTTGGCTACAAAAGT...CAAGCTCTGGTATAAGCTAAGGCTGGCAAGTTCAGATACTAAAATATTATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACGAAGAAATATTTTCTTaGGGACAGCTGCTATCTAGA +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDEEIFS*GQLLSR
Trigger: TCTAGATAGCAGCTGTCCCAAAGAAAATATTTCTTC...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS-3UTR CAA 90 bp ATCTTAGTTTGGGGTTATATAATTACAAAGATGACCCTGTGCAAGTTTTCAGACTTTAGACCTGGGCTTTaGAAAAACTTGCATTCCATT +
Preference number: 5 (lower is better)
Translates to: ILVWGYIITKMTLCKFSDFRPGL*KNLHSI
Trigger: AATGGAATGCAAGTTTTTCAAAAGCCCAGGTCTAAA...GTCTGAAAACTTGCACAGGGTCATCTTTGTAATTATATAACCCCAAACTAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 72 bp CATCTGCAAGAGGAGCTCTGGCCTGACATCGCTAACTaGGAGCAGCCCTGGCGGAAAGGTGCTGATCCCGGG +
Preference number: 6 (lower is better)
Translates to: HLQEELWPDIAN*EQPWRKGADPG
Trigger: CCCGGGATCAGCACCTTTCCGCCAGGGCTGCTCTCAGTTAGCGATGTCAGGCCAGAGCTCCTCTTGCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511624.1
ENST00000512822.1
CDS GCA 72 bp GGCATCAGGATCAGGCTCAGAGGAAGGAGCTGCAGATaGTTCAATAACCGCAGGTGGGAAATGACGGCGGCA +
Preference number: 6 (lower is better)
Translates to: GIRIRLRGRSCR*FNNRRWEMTAA
Trigger: TGCCGCCGTCATTTCCCACCTGCGGTTATTGAAGCATCTGCAGCTCCTTCCTCTGAGCCTGATCCTGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 72 bp GGAGCTGCAGATGCTTCAATAACCGCAGGTGGGAAATaGCGGCGGCACACAGGGCATGTTCCCGACTTTTGT +
Preference number: 6 (lower is better)
Translates to: GAADASITAGGK*RRHTGHVPDFC
Trigger: ACAAAAGTCGGGAACATGCCCTGTGTGCCGCCGTCATTTCCCACCTGCGGTTATTGAAGCATCTGCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 72 bp AGGTGGGGCATCAGGATCAGGCTCAGAGGAAGGAGCTaGAGATGCTTCAATAACCGCAGGTGGGAAATGACG +
Preference number: 6 (lower is better)
Translates to: RWGIRIRLRGRS*RCFNNRRWEMT
Trigger: CGTCATTTCCCACCTGCGGTTATTGAAGCATCTGCAGCTCCTTCCTCTGAGCCTGATCCTGATGCCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 72 bp CCTGCTGGTTTGGGCCAGACAGCCTTACCAGATTCTTaGTCCATTGCTGCTGGCTCCTTTTCAGTGTACTGT +
Preference number: 6 (lower is better)
Translates to: PAGLGQTALPDS*SIAAGSFSVYC
Trigger: ACAGTACACTGAAAAGGAGCCAGCAGCAATGGACCAAGAATCTGGTAAGGCTGTCTGGCCCAAACCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361189.7
ENST00000361557.4
ENST00000511624.1
CDS CAA 90 bp CTCCTGCTGGTTTGGGCCAGACAGCCTTACCAGATTCTTGGTCCATaGCTGCTGGCTCCTTTTCAGTGTACTGTGACATATATGGCAGCG +
Preference number: 6 (lower is better)
Translates to: LLLVWARQPYQILGP*LLAPFQCTVTYMAA
Trigger: CGCTGCCATATATGTCACAGTACACTGAAAAGGAGCCAGCAGCAATGGACCAAGAATCTGGTAAGGCTGTCTGGCCCAAACCAGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000511624.1
CDS TCA 72 bp TGTCAAGGTTTAGGGTGCTTCTGCAATACTGTCATTTaGAGGTGGGGCATCAGGATCAGGCTCAGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: CQGLGCFCNTVI*RWGIRIRLRGR
Trigger: CCTTCCTCTGAGCCTGATCCTGATGCCCCACCTTCAAATGACAGTATTGCAGAAGCACCCTAAACCTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp CTGTCAAGGTTTAGGGTGCTTCTGCAATACTGTCATTaGAAGGTGGGGCATCAGGATCAGGCTCAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LSRFRVLLQYCH*KVGHQDQAQRK
Trigger: CTTCCTCTGAGCCTGATCCTGATGCCCCACCTTCAAATGACAGTATTGCAGAAGCACCCTAAACCTTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 72 bp TCTCCACAGCCATTCCAAAAGGTGTTATCCACCTCTTaGCTTCCTGCTGTGGCTCCACTTTCTGATGTCATT +
Preference number: 6 (lower is better)
Translates to: SPQPFQKVLSTS*LPAVAPLSDVI
Trigger: AATGACATCAGAAAGTGGAGCCACAGCAGGAAGGCAAGAGGTGGATAACACCTTTTGGAATGGCTGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp GGCACACAGGGCATGTTCCCGACTTTTGTAGCCAAATaGAGACACAAGGTTTGTGAAAGAAATGGTGACAGG +
Preference number: 6 (lower is better)
Translates to: GTQGMFPTFVAK*RHKVCERNGDR
Trigger: CCTGTCACCATTTCTTTCACAAACCTTGTGTCTCAATTTGGCTACAAAAGTCGGGAACATGCCCTGTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp CCAGTGTATGCCTCTGCCTCTCTGTTTTCCAACTCAAATACTGTATaGCCTAATGATTCCTGGTATCTACTACCTTCCACGACTTCTGCA +
Preference number: 6 (lower is better)
Translates to: PVYASASLFSNSNTV*PNDSWYLLPSTTSA
Trigger: TGCAGAAGTCGTGGAAGGTAGTAGATACCAGGAATCATTAGGCAATACAGTATTTGAGTTGGAAAACAGAGAGGCAGAGGCATACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp CTGTTCAGGAGAACTTCCATGGTTCTTTTCCCTATCATTGGTATTTaGTTCACTACAAATATGCCCTGGACCACAGGCTGCATCTTCAGG +
Preference number: 6 (lower is better)
Translates to: LFRRTSMVLFPIIGI*FTTNMPWTTGCIFR
Trigger: CCTGAAGATGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAAAGAACCATGGAAGTTCTCCTGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp CTCACTACCTGTTCAGGAGAACTTCCATGGTTCTTTTCCCTATCATaGGTATTTTGTTCACTACAAATATGCCCTGGACCACAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LTTCSGELPWFFSLS*VFCSLQICPGPQAA
Trigger: TGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAAAGAACCATGGAAGTTCTCCTGAACAGGTAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 72 bp TGGAGTCATCCTCCAGGTTATTGTTACCATCCAACATaGAAGCTGGCTGTGCAAATTCATTGGCAGGTTCAT +
Preference number: 6 (lower is better)
Translates to: WSHPPGYCYHPT*KLAVQIHWQVH
Trigger: ATGAACCTGCCAATGAATTTGCACAGCCAGCTTTCATGTTGGATGGTAACAATAACCTGGAGGATGACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp CTGGAATATACTCTCCCTCAGAGTGATTATGAAGATTaGTACTGCTTCCTAAGGTATCCCTGCCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: LEYTLPQSDYED*YCFLRYPCLPH
Trigger: GTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATCACTCTGAGGGAGAGTATATTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp TACAAGCTCCTGGAATATACTCTCCCTCAGAGTGATTATGAAGATTaGTACTGCTTCCTAAGGTATCCCTGCCTTCCTCACTGTGATGTA +
Preference number: 6 (lower is better)
Translates to: YKLLEYTLPQSDYED*YCFLRYPCLPHCDV
Trigger: TACATCACAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATCACTCTGAGGGAGAGTATATTCCAGGAGCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp ACTTTCCTCAACTTCCAAAGCCTCTCTCCATCTTTGAACACTTCTTaGTTTCGCCTCATGCCTATTAAAACCTGTTTCTTGGTCCACCTG +
Preference number: 6 (lower is better)
Translates to: TFLNFQSLSPSLNTS*FRLMPIKTCFLVHL
Trigger: CAGGTGGACCAAGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAGAAGTGTTCAAAGATGGAGAGAGGCTTTGGAAGTTGAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS TCA 72 bp GTCTGTATGAACCAATGCAATTCCATTTTGGACACTTaGAGCACTACAAGCTCCTGGAATATACTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: VCMNQCNSILDT*STTSSWNILSL
Trigger: GAGGGAGAGTATATTCCAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGAATTGCATTGGTTCATACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 72 bp TATACTCTCCCTCAGAGTGATTATGAAGATTTGTACTaGTTCCTAAGGTATCCCTGCCTTCCTCACTGTGAT +
Preference number: 6 (lower is better)
Translates to: YTLPQSDYEDLY*FLRYPCLPHCD
Trigger: ATCACAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATCACTCTGAGGGAGAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp AGAACTTCCATGGTTCTTTTCCCTATCATTGGTATTTaGTTCACTACAAATATGCCCTGGACCACAGGCTGC +
Preference number: 6 (lower is better)
Translates to: RTSMVLFPIIGI*FTTNMPWTTGC
Trigger: GCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAAAGAACCATGGAAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp AGGTTATTGTTACCATCCAACATGAAAGCTGGCTGTGCAAATTCATaGGCAGGTTCATTTCCCTCATCACTGCTGCTTTCATTGACTTCA +
Preference number: 6 (lower is better)
Translates to: RLLLPSNMKAGCANS*AGSFPSSLLLSLTS
Trigger: TGAAGTCAATGAAAGCAGCAGTGATGAGGGAAATGAACCTGCCAATGAATTTGCACAGCCAGCTTTCATGTTGGATGGTAACAATAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 72 bp GATTATGAAGATTTGTACTGCTTCCTAAGGTATCCCTaGCTTCCTCACTGTGATGTACTGCAACAAAGGATT +
Preference number: 6 (lower is better)
Translates to: DYEDLYCFLRYP*LPHCDVLQQRI
Trigger: AATCCTTTGTTGCAGTACATCACAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 72 bp TTTTCCCTATCATTGGTATTTTGTTCACTACAAATATaGCCTGGACCACAGGCTGCATCTTCAGGTGAATGT +
Preference number: 6 (lower is better)
Translates to: FSLSLVFCSLQI*PGPQAASSGEC
Trigger: ACATTCACCTGAAGATGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 72 bp TGTGATGTACTGCAACAAAGGATTGACTGCTCTCAGTaGTTTGATTCAATGCTGAACCACAAGTGGGAATTT +
Preference number: 6 (lower is better)
Translates to: CDVLQQRIDCSQ*FDSMLNHKWEF
Trigger: AAATTCCCACTTGTGGTTCAGCATTGAATCAAACCACTGAGAGCAGTCAATCCTTTGTTGCAGTACATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp AGTCTGTATGAACCAATGCAATTCCATTTTGGACACTaGAAGCACTACAAGCTCCTGGAATATACTCTCCCT +
Preference number: 6 (lower is better)
Translates to: SLYEPMQFHFGH*KHYKLLEYTLP
Trigger: AGGGAGAGTATATTCCAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGAATTGCATTGGTTCATACAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp GATCATAAGAGTCTGTATGAACCAATGCAATTCCATTTTGGACACTaGAAGCACTACAAGCTCCTGGAATATACTCTCCCTCAGAGTGAT +
Preference number: 6 (lower is better)
Translates to: DHKSLYEPMQFHFGH*KHYKLLEYTLPQSD
Trigger: ATCACTCTGAGGGAGAGTATATTCCAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGAATTGCATTGGTTCATACAGACTCTTATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 72 bp CTTTGTTTCGCCTCATGCCTATTAAAACCTGTTTCTTaGTCCACCTGGCTTGAACTTATCAGTTTTCTAACT +
Preference number: 6 (lower is better)
Translates to: LCFASCLLKPVS*STWLELISFLT
Trigger: AGTTAGAAAACTGATAAGTTCAAGCCAGGTGGACCAAGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 72 bp TGCTATATCATCCTTAATATACTCACTGCAACAGATTaGACAGCATTGTTCCTGACCAATAGCAGTGTGATC +
Preference number: 6 (lower is better)
Translates to: CYIILNILTATD*TALFLTNSSVI
Trigger: GATCACACTGCTATTGGTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAGTATATTAAGGATGATATAGCA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp TGTTCAGGAGAACTTCCATGGTTCTTTTCCCTATCATaGGTATTTTGTTCACTACAAATATGCCCTGGACCA +
Preference number: 6 (lower is better)
Translates to: CSGELPWFFSLS*VFCSLQICPGP
Trigger: TGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAAAGAACCATGGAAGTTCTCCTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp AACTTCCAAAGCCTCTCTCCATCTTTGAACACTTCTTaGTTTCGCCTCATGCCTATTAAAACCTGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: NFQSLSPSLNTS*FRLMPIKTCFL
Trigger: CAAGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAGAAGTGTTCAAAGATGGAGAGAGGCTTTGGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp ATCCTTAATATACTCACTGCAACAGATTGGACAGCATaGTTCCTGACCAATAGCAGTGTGATCTTCAAGAAC +
Preference number: 6 (lower is better)
Translates to: ILNILTATDWTA*FLTNSSVIFKN
Trigger: GTTCTTGAAGATCACACTGCTATTGGTCAGGAACAATGCTGTCCAATCTGTTGCAGTGAGTATATTAAGGAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS GCA 72 bp AGGTTTGTGAAAGAAATGGTGACAGGGCAACTCTGTTaGTATATCATCCTTAATATACTCACTGCAACAGAT +
Preference number: 6 (lower is better)
Translates to: RFVKEMVTGQLC*YIILNILTATD
Trigger: ATCTGTTGCAGTGAGTATATTAAGGATGATATAGCAACAGAGTTGCCCTGTCACCATTTCTTTCACAAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 72 bp TTGAAGATGGTCATTATCTTCTCCATGTTTGCCATCTaGATCATAAGAGTCTGTATGAACCAATGCAATTCC +
Preference number: 6 (lower is better)
Translates to: LKMVIIFSMFAI*IIRVCMNQCNS
Trigger: GGAATTGCATTGGTTCATACAGACTCTTATGATCCAGATGGCAAACATGGAGAAGATAATGACCATCTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CCA 72 bp TTTTCCAACTCAAATACTGTATTGCCTAATGATTCCTaGTATCTACTACCTTCCACGACTTCTGCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: FSNSNTVLPNDS*YLLPSTTSAES
Trigger: ACTTTCTGCAGAAGTCGTGGAAGGTAGTAGATACCAGGAATCATTAGGCAATACAGTATTTGAGTTGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 90 bp TTCCTGGCTAGTATTATTTTGTTGTTTCGTACTAACCATTTCATCTaGAGAAGACCTCTGAATTTCCTGGCTATTCTGATGGACAAACTC +
Preference number: 6 (lower is better)
Translates to: FLASIILLFRTNHFI*RRPLNFLAILMDKL
Trigger: GAGTTTGTCCATCAGAATAGCCAGGAAATTCAGAGGTCTTCTCAAGATGAAATGGTTAGTACGAAACAACAAAATAATACTAGCCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4
CDS CAA 72 bp AGTATTATTTTGTTGTTTCGTACTAACCATTTCATCTaGAGAAGACCTCTGAATTTCCTGGCTATTCTGATG +
Preference number: 6 (lower is better)
Translates to: SIILLFRTNHFI*RRPLNFLAILM
Trigger: CATCAGAATAGCCAGGAAATTCAGAGGTCTTCTCAAGATGAAATGGTTAGTACGAAACAACAAAATAATACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361189.7
ENST00000361557.4