RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PJA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000181191

Ensembl transcript IDs: ENST00000361478.1, ENST00000374571.5, ENST00000374583.1, ENST00000374584.3, ENST00000471141.1, ENST00000477231.1, ENST00000590146.1

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTTCAAGAGGGCTCCTaGAGTATTGTGGATTTCAGA +
Preference number: 2 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKFQEGS*SIVDFR
Trigger: TCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGCTCCTGCAGTATTGTaGATTTCAGATGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKAPAVL*ISDGEN
Trigger: ATTTTCCCCATCTGAAATCCACAATACTGCAGGAGC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGCTCCTGCAGTATTGTaGATTTCAGATGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: AFTALQLQEHRPITCNKNAPAVL*ISDGEN
Trigger: ATTTTCCCCATCTGAAATCCACAATACTGCAGGAGC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR GCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTTTCAAGAGGGCTCCTaGAGTATTGTGGATTTCAGA +
Preference number: 2 (lower is better)
Translates to: KRTTLISFYGTAITGTSTFQEGS*SIVDFR
Trigger: TCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTTTCAAGAGGGCTCCTaGAGTATTGTGGATTTCAGA +
Preference number: 2 (lower is better)
Translates to: TATHSHSTEENKCDLTFRFQEGS*SIVDFR
Trigger: TCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGCTCCTGCAGTATTGTaGATTTCAGATGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: TATHSHSTEENKCDLTFRAPAVL*ISDGEN
Trigger: ATTTTCCCCATCTGAAATCCACAATACTGCAGGAGC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTTCAAGAGGGCTCCTaGAGTATTGTGGATTTCAGA +
Preference number: 2 (lower is better)
Translates to: QVTATHSHSTEENKCDLTFQEGS*SIVDFR
Trigger: TCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAA...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGCTCCTGCAGTATTGTaGATTTCAGATGGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: VTATHSHSTEENKCDLTFAPAVL*ISDGEN
Trigger: ATTTTCCCCATCTGAAATCCACAATACTGCAGGAGC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CAA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATAGGGCTCCTGCAGTATaGTGGATTTCAGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: AFTALQLQEHRPITCNKNRAPAV*WISDGE
Trigger: TTCCCCATCTGAAATCCACAATACTGCAGGAGCCCT...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGAGGGCTCCTGCAGTATaGTGGATTTCAGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: TATHSHSTEENKCDLTFRRAPAV*WISDGE
Trigger: TTCCCCATCTGAAATCCACAATACTGCAGGAGCCCT...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR CCA 72 bp TCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTaGATTTCAGATGGGGAAAATAATCAGACCAGGAGT +
Preference number: 3 (lower is better)
Translates to: SIVNFKRAPAVL*ISDGENNQTRS
Trigger: ACTCCTGGTCTGATTATTTTCCCCATCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CAA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTAGGGCTCCTGCAGTATaGTGGATTTCAGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: QVTATHSHSTEENKCDLTRAPAV*WISDGE
Trigger: TTCCCCATCTGAAATCCACAATACTGCAGGAGCCCT...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR-3UTR CAA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGCTCCTGCAGTATaGTGGATTTCAGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: VTATHSHSTEENKCDLTFRAPAV*WISDGE
Trigger: TTCCCCATCTGAAATCCACAATACTGCAGGAGCCCT...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR TCA 72 bp GACATTACAAGTAACAGCAACACATTCCCATTCTACTaGAGAAAACAAATGCGATTTAACTTTCAGGTTAGA +
Preference number: 3 (lower is better)
Translates to: DITSNSNTFPFY*RKQMRFNFQVR
Trigger: TCTAACCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000471141.1
CDS-3UTR GCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGTGGGGGAGGGAACATaGAGCGGCACACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKVGEGT*SGTRGR
Trigger: CCTGCCCCGTGTGCCGCTGCATGTTCCCTCCCCCAC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCAGGGTCGGCCATGGTaGGTCGTCGTCTCGGCACCT +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNQGRPW*VVVSAP
Trigger: AGGTGCCGAGACGACGACGCACCATGGCCGACCCTG...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGACCGCCAGAGCCGCTaGTCCCGGTCCCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDDRQSR*SRSRAP
Trigger: AGGAGCTCGGGACCGGGAGCAGCGGCTCTGGCGGTC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361478.1
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCAGGGTCGGCCATGGTaGGTCGTCGTCTCGGCACCT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWQGRPW*VVVSAP
Trigger: AGGTGCCGAGACGACGACGCACCATGGCCGACCCTG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAAATTGCTGCCATTGCTaGCAGCACTGGCCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKNCCHC*QHWPRR
Trigger: GCGCCGGGGCCAGTGCTGGCAGCAATGGCAGCAATT...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATAATTGCTGCCATTGCTaGCAGCACTGGCCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNNCCHC*QHWPRR
Trigger: GCGCCGGGGCCAGTGCTGGCAGCAATGGCAGCAATT...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAACACGGGGCAGGTGCCTaGCTTCTGAAGCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKHGAGA*LLKPDG
Trigger: TCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTG...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGGTAATTGCTGCCATTaGTGCCAGCACTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKGNCCH*CQHWPR
Trigger: CCGGGGCCAGTGCTGGCAGCAATGGCAGCAATTACC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGGCACACGGGGCAGGTaGCTGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNGTRGR*LTSEAR
Trigger: TCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGTGGGGGAGGGAACATaGAGCGGCACACGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTVGEGT*SGTRGR
Trigger: CCTGCCCCGTGTGCCGCTGCATGTTCCCTCCCCCAC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGCCAGGCCATCCGAGTaGCCCTCATTGTCATTGGCG +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNARPSE*PSLSLA
Trigger: CGCCAATGACAATGAGGGCCACTCGGATGGCCTGGC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGCCAGGCCATCCGAGTaGCCCTCATTGTCATTGGCG +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKARPSE*PSLSLA
Trigger: CGCCAATGACAATGAGGGCCACTCGGATGGCCTGGC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATAGTCAGGGTCGGCCATaGTGCGTCGTCGTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDSQGRP*CVVVSA
Trigger: TGCCGAGACGACGACGCACCATGGCCGACCCTGACT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGTCAGCTCTGCTAGCTaGGCATCTTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNVSSAS*ASCCRD
Trigger: GTCCCTGCAGCAAGATGCTCAGCTAGCAGAGCTGAC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR TCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCTCGGGATAGCCACTTaGACTCTCGCCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNLGIAT*TLASPS
Trigger: AGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAG...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCACGGGGCAGGTGCCTaGCTTCTGAAGCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWHGAGA*LLKPDG
Trigger: TCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCAGGGTCGGCCATGGTaGGTCGTCGTCTCGGCACCT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTQGRPW*VVVSAP
Trigger: AGGTGCCGAGACGACGACGCACCATGGCCGACCCTG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCAATTGCTGCCATTGCTaGCAGCACTGGCCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTNCCHC*QHWPRR
Trigger: GCGCCGGGGCCAGTGCTGGCAGCAATGGCAGCAATT...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGCACGGCAGCTCAGTTaGCACCTCCCCCTTCACATA +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNARQLS*HLPLHI
Trigger: TATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGGCACACGGGGCAGGTaGCTGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDGTRGR*LTSEAR
Trigger: TCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGGCACACGGGGCAGGTaGCTGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWGTRGR*LTSEAR
Trigger: TCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGCAATCCTTTCCCGCTaGCTCGTGGGTGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNAILSR*LVGGLK
Trigger: TTTCAGGCCACCCACGAGCCAGCGGGAAAGGATTGC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGCAATCCTTTCCCGCTaGCTCGTGGGTGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKAILSR*LVGGLK
Trigger: TTTCAGGCCACCCACGAGCCAGCGGGAAAGGATTGC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGCGATCGGCTCCTCTTaGTGGTTTGACTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDAIGSS*WFDWGL
Trigger: CAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGCGATCGGCTCCTCTTaGTGGTTTGACTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWAIGSS*WFDWGL
Trigger: CAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGCCAGGCCATCCGAGTaGCCCTCATTGTCATTGGCG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWARPSE*PSLSLA
Trigger: CGCCAATGACAATGAGGGCCACTCGGATGGCCTGGC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCCCAGCTTTCGCCACTaGAGGACAGGGTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNPSFRH*RTGFAL
Trigger: GAGAGCAAACCCTGTCCTCCAGTGGCGAAAGCTGGG...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGGTTTGACTGGGGGCTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNGLTGG*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATCTCCTCTTGGTGGTTTaGCTGGGGGCTGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDLLLVV*LGADLC
Trigger: GCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAG...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCTCCTCTTGGTGGTTTaGCTGGGGGCTGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNLLLVV*LGADLC
Trigger: GCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGTCAGCTCTGCTAGCTaGGCATCTTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWVSSAS*ASCCRD
Trigger: GTCCCTGCAGCAAGATGCTCAGCTAGCAGAGCTGAC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR TCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGTCAGCTCTGCTAGCTaGGCATCTTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDVSSAS*ASCCRD
Trigger: GTCCCTGCAGCAAGATGCTCAGCTAGCAGAGCTGAC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR TCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCTCGGGATAGCCACTTaGACTCTCGCCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNLGIAT*TLASPS
Trigger: AGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAACGCCATGATCTTCAGTaGCCAGGATCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKRHDLQ*PGSREE
Trigger: CTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCG...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCACGGGGCAGGTGCCTaGCTTCTGAAGCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRHGAGA*LLKPDG
Trigger: TCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGGCTCGTGGGTGGCCTaGAACAAGTCCAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDGSWVA*NKSRKP
Trigger: TGGCTTTCTGGACTTGTTTCAGGCCACCCACGAGCC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374571.5
CDS-3UTR GCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCTGGGGGCTGATCTGTaGATTGGGACTTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNLGADL*IGTSEF
Trigger: GAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAG...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGCCTCTCCCTCTTCTTaGCAGGCCATCCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTASPSS*QAIRVA
Trigger: GGCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGCCTCTCCCTCTTCTTaGCAGGCCATCCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDASPSS*QAIRVA
Trigger: GGCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGCCTCTCCCTCTTCTTaGCAGGCCATCCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFASPSS*QAIRVA
Trigger: GGCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGGTAATTGCTGCCATTaGTGCCAGCACTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRGNCCH*CQHWPR
Trigger: CCGGGGCCAGTGCTGGCAGCAATGGCAGCAATTACC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAACACCTCTACATCCACTaGGAGAGACTCCAAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKHLYIH*ERLQVR
Trigger: GCGCACTTGGAGTCTCTCGCAGTGGATGTAGAGGTG...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGCACGGCAGCTCAGTTaGCACCTCCCCCTTCACATA +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDARQLS*HLPLHI
Trigger: TATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACGCAATCCTTTCCCGCTaGCTCGTGGGTGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNAILSR*LVGGLK
Trigger: TTTCAGGCCACCCACGAGCCAGCGGGAAAGGATTGC...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGCGATCGGCTCCTCTTaGTGGTTTGACTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRAIGSS*WFDWGL
Trigger: CAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATAGTTTTCCCTCTCACTaGCGGTCGCTCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDSFPSH*RSLNRP
Trigger: GGGCCTGTTGAGCGACCGCCAGTGAGAGGGAAAACT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGGCCCTCATTGTCATTaGCGGTATCCCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWGPHCH*RYPSTW
Trigger: CCAGGTGGAGGGATACCGCCAATGACAATGAGGGCC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATAGTCAGGGTCGGCCATaGTGCGTCGTCGTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDSQGRP*CVVVSA
Trigger: TGCCGAGACGACGACGCACCATGGCCGACCCTGACT...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGTCAGGGTCGGCCATaGTGCGTCGTCGTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFSQGRP*CVVVSA
Trigger: TGCCGAGACGACGACGCACCATGGCCGACCCTGACT...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATCCCAGCTTTCGCCACTaGAGGACAGGGTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDPSFRH*RTGFAL
Trigger: GAGAGCAAACCCTGTCCTCCAGTGGCGAAAGCTGGG...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCCCAGCTTTCGCCACTaGAGGACAGGGTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNPSFRH*RTGFAL
Trigger: GAGAGCAAACCCTGTCCTCCAGTGGCGAAAGCTGGG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGGTTTGACTGGGGGCTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDGLTGG*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACGGTTTGACTGGGGGCTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNGLTGG*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACC...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCTCCTCTTGGTGGTTTaGCTGGGGGCTGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTLLLVV*LGADLC
Trigger: GCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGTCAGCTCTGCTAGCTaGGCATCTTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRVSSAS*ASCCRD
Trigger: GTCCCTGCAGCAAGATGCTCAGCTAGCAGAGCTGAC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCTCGGGATAGCCACTTaGACTCTCGCCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLGIAT*TLASPS
Trigger: AGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCGCCATGATCTTCAGTaGCCAGGATCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWRHDLQ*PGSREE
Trigger: CTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATCGCCATGATCTTCAGTaGCCAGGATCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDRHDLQ*PGSREE
Trigger: CTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCG...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCACGGGGCAGGTGCCTaGCTTCTGAAGCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDHGAGA*LLKPDG
Trigger: TCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCCCAGCCAAAGACCTTaGCCCTTTCTCTGGGTCATA +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNPSQRP*PFLWVI
Trigger: TATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGG...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGGTAATTGCTGCCATTaGTGCCAGCACTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFGNCCH*CQHWPR
Trigger: CCGGGGCCAGTGCTGGCAGCAATGGCAGCAATTACC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATAAGGGCAGTTTCCATTaGCTGGGCCAGGCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDKGSFH*LGQAFF
Trigger: GAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGAAGGGCAGTTTCCATTaGCTGGGCCAGGCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWKGSFH*LGQAFF
Trigger: GAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTT...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGCGAGAGACTCCAAGTaGGCAAGGGCAGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKARDSK*ARAVSI
Trigger: AATGGAAACTGCCCTTGCGCACTTGGAGTCTCTCGC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCGGGAAGAGCGTCAATaGTCTCCTTGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNREERQ*SPCLLV
Trigger: CACCAGCAAGCAAGGAGAGCATTGACGCTCTTCCCG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGGCACACGGGGCAGGTaGCTGACTTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFGTRGR*LTSEAR
Trigger: TCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGGTTTCCAATACAGCTaGGGCTCGGGTAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRGFQYS*GSGRRA
Trigger: AGCCCTCCTACCCGAGCCCCAGCTGTATTGGAAACC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGCAATCCTTTCCCGCTaGCTCGTGGGTGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRAILSR*LVGGLK
Trigger: TTTCAGGCCACCCACGAGCCAGCGGGAAAGGATTGC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGAGTTCGTCTTTCTCTaGCTGGCAATCCTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKEFVFL*LAILSR
Trigger: GCGGGAAAGGATTGCCAGCCAGAGAAAGACGAACTC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGCGATCGGCTCCTCTTaGTGGTTTGACTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTAIGSS*WFDWGL
Trigger: CAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAAGAGAAATGTGGAGGTaGCCCAGCCAAAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKREMWR*PSQRPC
Trigger: GCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCT...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGGCCCTCATTGTCATTaGCGGTATCCCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRGPHCH*RYPSTW
Trigger: CCAGGTGGAGGGATACCGCCAATGACAATGAGGGCC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGCCAGGCCATCCGAGTaGCCCTCATTGTCATTGGCG +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDARPSE*PSLSLA
Trigger: CGCCAATGACAATGAGGGCCACTCGGATGGCCTGGC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAATTCGCTACAGCAGATaGGGCAGCACATCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKIRYSR*GSTSPD
Trigger: GTCAGGAGATGTGCTGCCCCATCTGCTGTAGCGAAT...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCCTTGGTCTTTAGAGTaGGGGAGGGAACATGCAGCG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNPWSLE*GREHAA
Trigger: CGCTGCATGTTCCCTCCCCCACTCTAAAGACCAAGG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAAGGAGTAAACGGCCTTaGTCTTTAGAGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKRSKRP*SLEWGR
Trigger: CCTCCCCCACTCTAAAGACCAAGGCCGTTTACTCCT...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCGGTTTGACTGGGGGCTaGTCTGTGCATTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTGLTGG*SVHWDF
Trigger: GAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACC...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCTCCTCTTGGTGGTTTaGCTGGGGGCTGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFLLLVV*LGADLC
Trigger: GCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACTTCCTCTGCACTCTTTaGGGTGTTTTCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNFLCTL*GVFPTT
Trigger: GGTGGTGGGGAAAACACCTCAAAGAGTGCAGAGGAA...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR TCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCTCGGGATAGCCACTTaGACTCTCGCCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDLGIAT*TLASPS
Trigger: AGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGGTTGCATCAACTCGTaGCCAGAATCATTATCCCCC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNGCINS*PESLSP
Trigger: GGGGGATAATGATTCTGGTCACGAGTTGATGCAACC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCAGGTGCCTGACTTCTaGAGCCAGATGGACACACAC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRQVPDF*SQMDTH
Trigger: GTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCTGGGGGCTGATCTGTaGATTGGGACTTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLGADL*IGTSEF
Trigger: GAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGTACTCACAGGAGCCCTaGTGGGACGTGCAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWYSQEP*WDVQVN
Trigger: ATTTACCTGCACGTCCCAGCAGGGCTCCTGTGAGTA...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAACAGGCGTTCTTCAAGTaGCATGTAGGTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKQAFFK*HVGEEL
Trigger: CAGTTCCTCACCTACATGGCACTTGAAGAACGCCTG...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACGCGAGAGACTCCAAGTaGGCAAGGGCAGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNARDSK*ARAVSI
Trigger: AATGGAAACTGCCCTTGCGCACTTGGAGTCTCTCGC...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGCGAGAGACTCCAAGTaGGCAAGGGCAGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDARDSK*ARAVSI
Trigger: AATGGAAACTGCCCTTGCGCACTTGGAGTCTCTCGC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCACCTCTACATCCACTaGGAGAGACTCCAAGTGCGC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRHLYIH*ERLQVR
Trigger: GCGCACTTGGAGTCTCTCGCAGTGGATGTAGAGGTG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCGGGAAGAGCGTCAATaGTCTCCTTGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRREERQ*SPCLLV
Trigger: CACCAGCAAGCAAGGAGAGCATTGACGCTCTTCCCG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGCACGGCAGCTCAGTTaGCACCTCCCCCTTCACATA +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFARQLS*HLPLHI
Trigger: TATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGGTTTCCAATACAGCTaGGGCTCGGGTAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTGFQYS*GSGRRA
Trigger: AGCCCTCCTACCCGAGCCCCAGCTGTATTGGAAACC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCCGCTGGCTCGTGGGTaGCCTGAAACTGACATAAGC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFPLARG*PETDIS
Trigger: GCTTATGTCAGTTTCAGGCCACCCACGAGCCAGCGG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGAGTTCGTCTTTCTCTaGCTGGCAATCCTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWEFVFL*LAILSR
Trigger: GCGGGAAAGGATTGCCAGCCAGAGAAAGACGAACTC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTCTTGGTGGTTTGACTaGGGGCTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNSWWFD*GLICAL
Trigger: CAATGCACAGATCAGCCCCCAGTCAAACCACCAAGA...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGATCGGCTCCTCTTGGTaGTTTGACTGGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRIGSSW*FDWGLI
Trigger: GATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGAT...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAACGAGTAGTGGAAAATaGCGATCGGCTCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKTSSGK*RSAPLG
Trigger: ACCAAGAGGAGCCGATCGCCATTTTCCACTACTCGT...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGTTTTCCCTCTCACTaGCGGTCGCTCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFSFPSH*RSLNRP
Trigger: GGGCCTGTTGAGCGACCGCCAGTGAGAGGGAAAACT...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTAGTTTTCCCTCTCACTaGCGGTCGCTCAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTSFPSH*RSLNRP
Trigger: GGGCCTGTTGAGCGACCGCCAGTGAGAGGGAAAACT...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGAGAGAAATGTGGAGGTaGCCCAGCCAAAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWREMWR*PSQRPC
Trigger: GCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCT...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACAGAGAAATGTGGAGGTaGCCCAGCCAAAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNREMWR*PSQRPC
Trigger: GCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCT...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGGCCACACTACTTTGTaGCAGGAAGTCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWGHTTL*QEVSSA
Trigger: AGCAGAGCTGACTTCCTGCCACAAAGTAGTGTGGCC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGGCCACACTACTTTGTaGCAGGAAGTCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDGHTTL*QEVSSA
Trigger: AGCAGAGCTGACTTCCTGCCACAAAGTAGTGTGGCC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCACAGGAGCCCTGCTaGGACGTGCAGGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKSQEPC*DVQVNF
Trigger: AAAATTTACCTGCACGTCCCAGCAGGGCTCCTGTGA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTCACAGGAGCCCTGCTaGGACGTGCAGGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNSQEPC*DVQVNF
Trigger: AAAATTTACCTGCACGTCCCAGCAGGGCTCCTGTGA...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGGCCCTCATTGTCATTaGCGGTATCCCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFGPHCH*RYPSTW
Trigger: CCAGGTGGAGGGATACCGCCAATGACAATGAGGGCC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGGCCCTCATTGTCATTaGCGGTATCCCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTGPHCH*RYPSTW
Trigger: CCAGGTGGAGGGATACCGCCAATGACAATGAGGGCC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCCCAGCTTTCGCCACTaGAGGACAGGGTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFPSFRH*RTGFAL
Trigger: GAGAGCAAACCCTGTCCTCCAGTGGCGAAAGCTGGG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGCAGTTTCCATTGCCTaGGCCAGGCGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDAVSIA*ARRSSS
Trigger: ACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATATTCGCTACAGCAGATaGGGCAGCACATCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDIRYSR*GSTSPD
Trigger: GTCAGGAGATGTGCTGCCCCATCTGCTGTAGCGAAT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATAGGAGTAAACGGCCTTaGTCTTTAGAGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDRSKRP*SLEWGR
Trigger: CCTCCCCCACTCTAAAGACCAAGGCCGTTTACTCCT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACAGGAGTAAACGGCCTTaGTCTTTAGAGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNRSKRP*SLEWGR
Trigger: CCTCCCCCACTCTAAAGACCAAGGCCGTTTACTCCT...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGAGGAGTAAACGGCCTTaGTCTTTAGAGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWRSKRP*SLEWGR
Trigger: CCTCCCCCACTCTAAAGACCAAGGCCGTTTACTCCT...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCCGCTGGCTCGTGGGTaGCCTGAAACAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTPLARG*PETSPE
Trigger: TTCTGGACTTGTTTCAGGCCACCCACGAGCCAGCGG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374571.5
CDS-3UTR TCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGGAGTAGCATTCCAGTaGCTGTCAGGTGTAGACCAA +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWGVAFQ*LSGVDQ
Trigger: TTGGTCTACACCTGACAGTCACTGGAATGCTACTCC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361478.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCCTGACCCATCACTCTaGCTTAGGAGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWPDPSL*LRRVSN
Trigger: ATTGGAAACCCTCCTAAGTCAGAGTGATGGGTCAGG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACTTCAGAAGACGACTGTaGGGCCACACTACTTTGTGG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNFRRRL*GHTTLW
Trigger: CCACAAAGTAGTGTGGCCTCACAGTCGTCTTCTGAA...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTTCCTCTGCACTCTTTaGGGTGTTTTCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRFLCTL*GVFPTT
Trigger: GGTGGTGGGGAAAACACCTCAAAGAGTGCAGAGGAA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR TCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACGATGCCTGCTCTTCCTaGAGAGATGGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNDACSS*RDGSRT
Trigger: AGTTCGAGAACCATCTCTTCAGGAAGAGCAGGCATC...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGATGCCTGCTCTTCCTaGAGAGATGGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWDACSS*RDGSRT
Trigger: AGTTCGAGAACCATCTCTTCAGGAAGAGCAGGCATC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGGTTGCATCAACTCGTaGCCAGAATCATTATCCCCC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDGCINS*PESLSP
Trigger: GGGGGATAATGATTCTGGTCACGAGTTGATGCAACC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCGCCATGATCTTCAGTaGCCAGGATCTCGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTRHDLQ*PGSREE
Trigger: CTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCAGGTGCCTGACTTCTaGAGCCAGATGGACACACAC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFQVPDF*SQMDTH
Trigger: GTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCAGGTGCCTGACTTCTaGAGCCAGATGGACACACAC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTQVPDF*SQMDTH
Trigger: GTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCTGGGGGCTGATCTGTaGATTGGGACTTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTLGADL*IGTSEF
Trigger: GAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTACTCACAGGAGCCCTaGTGGGACGTGCAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRYSQEP*WDVQVN
Trigger: ATTTACCTGCACGTCCCAGCAGGGCTCCTGTGAGTA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCTTCAAGGTAATTGCTaGCATTGCTGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWLQGNC*HCCQHW
Trigger: CCAGTGCTGGCAGCAATGGCAGCAATTACCTTGAAG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCTTCTTCAAGGTAATTaGTGCCATTGCTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNLLQGN*CHCCQH
Trigger: GTGCTGGCAGCAATGGCAGCAATTACCTTGAAGAAG...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCAGGCGTTCTTCAAGTaGCATGTAGGTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNQAFFK*HVGEEL
Trigger: CAGTTCCTCACCTACATGGCACTTGAAGAACGCCTG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCAGGCGTTCTTCAAGTaGCATGTAGGTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWQAFFK*HVGEEL
Trigger: CAGTTCCTCACCTACATGGCACTTGAAGAACGCCTG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATAAGGGCAGTTTCCATTaGCTGGGCCAGGCGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDKGSFH*LGQAFF
Trigger: GAAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTT...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCACCTCTACATCCACTaGGAGAGACTCCAAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFHLYIH*ERLQVR
Trigger: GCGCACTTGGAGTCTCTCGCAGTGGATGTAGAGGTG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCGGGAAGAGCGTCAATaGTCTCCTTGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFREERQ*SPCLLV
Trigger: CACCAGCAAGCAAGGAGAGCATTGACGCTCTTCCCG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGAGTTCGTCTTTCTCTaGCTGGCAATCCTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFREFVFL*LAILSR
Trigger: GCGGGAAAGGATTGCCAGCCAGAGAAAGACGAACTC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATTCTTGGTGGTTTGACTaGGGGCTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDSWWFD*GLICAL
Trigger: CAATGCACAGATCAGCCCCCAGTCAAACCACCAAGA...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCATCGGCTCCTCTTGGTaGTTTGACTGGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFIGSSW*FDWGLI
Trigger: GATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGAT...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACACGAGTAGTGGAAAATaGCGATCGGCTCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNTSSGK*RSAPLG
Trigger: ACCAAGAGGAGCCGATCGCCATTTTCCACTACTCGT...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGACGAGTAGTGGAAAATaGCGATCGGCTCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWTSSGK*RSAPLG
Trigger: ACCAAGAGGAGCCGATCGCCATTTTCCACTACTCGT...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATCGGTATCCCTCCACCTaGAAGTACTGTGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDRYPST*KYCVAY
Trigger: ATATGCCACACAGTACTTCCAGGTGGAGGGATACCG...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTTTTCTGGTTTCACTTaGTCACTCCTCGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNFSGFT*SLLASR
Trigger: ACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAA...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTTTCTGGTTTCACTTaGTCACTCCTCGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKFSGFT*SLLASR
Trigger: ACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCTCGGCACCTTTTCTaGTTTCACTTGGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKSRHLF*FHLVTP
Trigger: AGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACACTCACCTTAGCCTGTaGAGGTTCCCGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNTHLSL*RFPLFF
Trigger: AAAGAAGAGCGGGAACCTCCACAGGCTAAGGTGAGT...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGGTCTTCGCTCACACTaGAGTCATCTTCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNGLRSH*SHLQGC
Trigger: ACAACCTTGAAGATGACTCCAGTGTGAGCGAAGACC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGCAGTTTCCATTGCCTaGGCCAGGCGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRAVSIA*ARRSSS
Trigger: ACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCGCAGTTTCCATTGCCTaGGCCAGGCGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTAVSIA*ARRSSS
Trigger: ACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGC...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCCTTGGTCTTTAGAGTaGGGGAGGGAACATGCAGCG +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDPWSLE*GREHAA
Trigger: CGCTGCATGTTCCCTCCCCCACTCTAAAGACCAAGG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCCTTGGTCTTTAGAGTaGGGGAGGGAACATGCAGCG +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTPWSLE*GREHAA
Trigger: CGCTGCATGTTCCCTCCCCCACTCTAAAGACCAAGG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCCTTGGTCTTTAGAGTaGGGGAGGGAACATGCAGCG +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFPWSLE*GREHAA
Trigger: CGCTGCATGTTCCCTCCCCCACTCTAAAGACCAAGG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGGAGTAGCATTCCAGTaGCTGTCAGGTGTAGACCAA +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRGVAFQ*LSGVDQ
Trigger: TTGGTCTACACCTGACAGTCACTGGAATGCTACTCC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361478.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCTACCTGTATTGGACTaGTACCCTCCTGTTGGATTG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNLPVLD*YPPVGL
Trigger: CAATCCAACAGGAGGGTATCAGTCCAATACAGGTAG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCTCTGCACTCTTTaGGGTGTTTTCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTFLCTL*GVFPTT
Trigger: GGTGGTGGGGAAAACACCTCAAAGAGTGCAGAGGAA...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGATGCCTGCTCTTCCTaGAGAGATGGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRDACSS*RDGSRT
Trigger: AGTTCGAGAACCATCTCTTCAGGAAGAGCAGGCATC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGGTTGCATCAACTCGTaGCCAGAATCATTATCCCCC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRGCINS*PESLSP
Trigger: GGGGGATAATGATTCTGGTCACGAGTTGATGCAACC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATTGTTTCCATCCAGCATaGATACCCCAGGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDCFHPA*IPQVAS
Trigger: TGATGCAACCTGGGGTATTCATGCTGGATGGAAACA...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGGAGTAGCATTCCAGTaGCTGTCAGGTGTAGACCTG +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDGVAFQ*LSGVDL
Trigger: CAGGTCTACACCTGACAGTCACTGGAATGCTACTCC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374583.1
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGAGGCCATTCCTCTTCTaGTACCCGAAGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRRPFLF*YPKLCT
Trigger: AGTACAGAGCTTCGGGTAGCAGAAGAGGAATGGCCT...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCCCAGCCAAAGACCTTaGCCCTTTCTCTGGGTCATA +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFPSQRP*PFLWVI
Trigger: TATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTACTCACAGGAGCCCTaGTGGGACGTGCAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTYSQEP*WDVQVN
Trigger: ATTTACCTGCACGTCCCAGCAGGGCTCCTGTGAGTA...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCACGCAGTTTGGACTTaGCAGGTTTCTGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNHAVWT*QVSDFG
Trigger: CCCAAAATCAGAAACCTGGCAAGTCCAAACTGCGTG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCACGCAGTTTGGACTTaGCAGGTTTCTGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWHAVWT*QVSDFG
Trigger: CCCAAAATCAGAAACCTGGCAAGTCCAAACTGCGTG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCTGGAGGACAGGGTTTaGTCTCGGCTTCGATATTTC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLEDRV*SRLRYF
Trigger: GAAATATCGAAGCCGAGAGCAAACCCTGTCCTCCAG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCTTCAAGGTAATTGCTaGCATTGCTGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLQGNC*HCCQHW
Trigger: CCAGTGCTGGCAGCAATGGCAGCAATTACCTTGAAG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCTTCAAGGTAATTGCTaGCATTGCTGCCAGCACTGG +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTLQGNC*HCCQHW
Trigger: CCAGTGCTGGCAGCAATGGCAGCAATTACCTTGAAG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATCTTCTTCAAGGTAATTaGTGCCATTGCTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDLLQGN*CHCCQH
Trigger: GTGCTGGCAGCAATGGCAGCAATTACCTTGAAGAAG...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATAGCTCTGTACTCTCTTaGCGGATACCTGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDSSVLS*RIPGIV
Trigger: GACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATAAAACTAGAGAAATGTaGAGGTGGCCCAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNKTREM*RWPSQR
Trigger: TCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTT...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGGCCACACTACTTTGTaGCAGGAAGTCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTGHTTL*QEVSSA
Trigger: AGCAGAGCTGACTTCCTGCCACAAAGTAGTGTGGCC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGGCCACACTACTTTGTaGCAGGAAGTCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFGHTTL*QEVSSA
Trigger: AGCAGAGCTGACTTCCTGCCACAAAGTAGTGTGGCC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGGTTTCACGCAGTTTaGACTTGCCAGGTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKWFHAV*TCQVSD
Trigger: ATCAGAAACCTGGCAAGTCCAAACTGCGTGAAACCA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATCCTGGAAGTACTGTGTaGCATATCGTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNPGSTV*HIVIII
Trigger: GATGATGATGACGATATGCCACACAGTACTTCCAGG...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCGGTATCCCTCCACCTaGAAGTACTGTGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTRYPST*KYCVAY
Trigger: ATATGCCACACAGTACTTCCAGGTGGAGGGATACCG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCGGTATCCCTCCACCTaGAAGTACTGTGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRRYPST*KYCVAY
Trigger: ATATGCCACACAGTACTTCCAGGTGGAGGGATACCG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACTTTTCTGGTTTCACTTaGTCACTCCTCGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNFSGFT*SLLASR
Trigger: ACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAA...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGTTTTCTGGTTTCACTTaGTCACTCCTCGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWFSGFT*SLLASR
Trigger: ACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAA...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATTCTCGGCACCTTTTCTaGTTTCACTTGGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDSRHLF*FHLVTP
Trigger: AGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGA...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGACTCACCTTAGCCTGTaGAGGTTCCCGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRTHLSL*RFPLFF
Trigger: AAAGAAGAGCGGGAACCTCCACAGGCTAAGGTGAGT...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCACTCACCTTAGCCTGTaGAGGTTCCCGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTTHLSL*RFPLFF
Trigger: AAAGAAGAGCGGGAACCTCCACAGGCTAAGGTGAGT...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGCAGTTTCCATTGCCTaGGCCAGGCGTTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFAVSIA*ARRSSS
Trigger: ACTTGAAGAACGCCTGGCCCAGGCAATGGAAACTGC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCATTCGCTACAGCAGATaGGGCAGCACATCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFIRYSR*GSTSPD
Trigger: GTCAGGAGATGTGCTGCCCCATCTGCTGTAGCGAAT...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTATTCGCTACAGCAGATaGGGCAGCACATCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTIRYSR*GSTSPD
Trigger: GTCAGGAGATGTGCTGCCCCATCTGCTGTAGCGAAT...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCGGTATCCCTCCACCTaGAAGTACTGGAATAGTCCT +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTRYPST*KYWNSP
Trigger: AGGACTATTCCAGTACTTCCAGGTGGAGGGATACCG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374584.3
CDS-3UTR TCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCCTGACCCATCACTCTaGCTTAGGAGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTPDPSL*LRRVSN
Trigger: ATTGGAAACCCTCCTAAGTCAGAGTGATGGGTCAGG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCCTGACCCATCACTCTaGCTTAGGAGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDPDPSL*LRRVSN
Trigger: ATTGGAAACCCTCCTAAGTCAGAGTGATGGGTCAGG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCTACCTGTATTGGACTaGTACCCTCCTGTTGGATTG +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLPVLD*YPPVGL
Trigger: CAATCCAACAGGAGGGTATCAGTCCAATACAGGTAG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTCAGAAGACGACTGTaGGGCCACACTACTTTGTGG +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDFRRRL*GHTTLW
Trigger: CCACAAAGTAGTGTGGCCTCACAGTCGTCTTCTGAA...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
CDS-3UTR TCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGATGCCTGCTCTTCCTaGAGAGATGGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDDACSS*RDGSRT
Trigger: AGTTCGAGAACCATCTCTTCAGGAAGAGCAGGCATC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGGTTGCATCAACTCGTaGCCAGAATCATTATCCCCC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTGCINS*PESLSP
Trigger: GGGGGATAATGATTCTGGTCACGAGTTGATGCAACC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTGTTTCCATCCAGCATaGATACCCCAGGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRCFHPA*IPQVAS
Trigger: TGATGCAACCTGGGGTATTCATGCTGGATGGAAACA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTGTTTCCATCCAGCATaGATACCCCAGGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTCFHPA*IPQVAS
Trigger: TGATGCAACCTGGGGTATTCATGCTGGATGGAAACA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCTGGAGGACAGGGTTTaGTCTCGGCTTCGATATTTC +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDLEDRV*SRLRYF
Trigger: GAAATATCGAAGCCGAGAGCAAACCCTGTCCTCCAG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCATTATCCCCCTCACTaGTACTGTCATTCTCATGGT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNHYPPH*YCHSHG
Trigger: ACCATGAGAATGACAGTAGCAGTGAGGGGGATAATG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCAGGCGTTCTTCAAGTaGCATGTAGGTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDQAFFK*HVGEEL
Trigger: CAGTTCCTCACCTACATGGCACTTGAAGAACGCCTG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCTTTCTTCTAAGGCCTaGAGTAGCATTCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWLSSKA*SSIPVT
Trigger: AGTCACTGGAATGCTACTCCAGGCCTTAGAAGAAAG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTCTTGGTGGTTTGACTaGGGGCTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTSWWFD*GLICAL
Trigger: CAATGCACAGATCAGCCCCCAGTCAAACCACCAAGA...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCTCTTGGTGGTTTGACTaGGGGCTGATCTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFSWWFD*GLICAL
Trigger: CAATGCACAGATCAGCCCCCAGTCAAACCACCAAGA...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATACGAGTAGTGGAAAATaGCGATCGGCTCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDTSSGK*RSAPLG
Trigger: ACCAAGAGGAGCCGATCGCCATTTTCCACTACTCGT...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATATCAATATTCAGGTTaGTTCCCGAACTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKYQYSG*FPNSRC
Trigger: ACAGCGAGAGTTCGGGAACCAACCTGAATATTGATA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTATCAATATTCAGGTTaGTTCCCGAACTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: AFTALQLQEHRPITCNKNYQYSG*FPNSRC
Trigger: ACAGCGAGAGTTCGGGAACCAACCTGAATATTGATA...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCAGCTCTGTACTCTCTTaGCGGATACCTGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTSSVLS*RIPGIV
Trigger: GACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCT...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCCTTGCCCCTTTCTCTaGGTCATACAGCTTATCATC +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTPCPFL*VIQLII
Trigger: GATGATAAGCTGTATGACCCAGAGAAAGGGGCAAGG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGAAAACTAGAGAAATGTaGAGGTGGCCCAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWKTREM*RWPSQR
Trigger: TCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTT...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTCACAGGAGCCCTGCTaGGACGTGCAGGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDSQEPC*DVQVNF
Trigger: AAAATTTACCTGCACGTCCCAGCAGGGCTCCTGTGA...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCCTGGAAGTACTGTGTaGCATATCGTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNPGSTV*HIVIII
Trigger: GATGATGATGACGATATGCCACACAGTACTTCCAGG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATACTCACCTTAGCCTGTaGAGGTTCCCGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDTHLSL*RFPLFF
Trigger: AAAGAAGAGCGGGAACCTCCACAGGCTAAGGTGAGT...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAACTACTGTCATTCTCATaGTACTGGAGCCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKLLSFS*YWSQGI
Trigger: AATTCCTTGGCTCCAGTACCATGAGAATGACAGTAG...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR TCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCTGTTTCCATCCAGCATaGATACCCCAGGTTGCATCA +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFCFHPA*IPQVAS
Trigger: TGATGCAACCTGGGGTATTCATGCTGGATGGAAACA...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCACGCAGTTTGGACTTaGCAGGTTTCTGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFHAVWT*QVSDFG
Trigger: CCCAAAATCAGAAACCTGGCAAGTCCAAACTGCGTG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCTTCTTCAAGGTAATTaGTGCCATTGCTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDLLQGN*CHCCQH
Trigger: GTGCTGGCAGCAATGGCAGCAATTACCTTGAAGAAG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCATTATCCCCCTCACTaGTACTGTCATTCTCATGGT +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRHYPPH*YCHSHG
Trigger: ACCATGAGAATGACAGTAGCAGTGAGGGGGATAATG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATTATCCCCCTCACTaGTACTGTCATTCTCATGGT +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTHYPPH*YCHSHG
Trigger: ACCATGAGAATGACAGTAGCAGTGAGGGGGATAATG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGTTTCAAGAGGGCTCCTaGAGTATTGTGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWFQEGS*SIVDFR
Trigger: TCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAA...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACTTTCAAGAGGGCTCCTaGAGTATTGTGGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNFQEGS*SIVDFR
Trigger: TCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAA...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATAAGCTTTTACGGCACTaGAATTACAGGAACATCGAC +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDKLLRH*NYRNID
Trigger: GTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000471141.1
CDS-3UTR CCA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATCTCTTGGCGGATACCTaGAATAGTCCTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: FTALQLQEHRPITCNKNDLLADT*NSPHYQ
Trigger: TTGATAATGAGGACTATTCCAGGTATCCGCCAAGAG...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCTCTTGGCGGATACCTaGAATAGTCCTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWLLADT*NSPHYQ
Trigger: TTGATAATGAGGACTATTCCAGGTATCCGCCAAGAG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGCTCTGTACTCTCTTaGCGGATACCTGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFSSVLS*RIPGIV
Trigger: GACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCT...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCCTTGCCCCTTTCTCTaGGTCATACAGCTTATCATC +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDPCPFL*VIQLII
Trigger: GATGATAAGCTGTATGACCCAGAGAAAGGGGCAAGG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCCTGGAAGTACTGTGTaGCATATCGTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRPGSTV*HIVIII
Trigger: GATGATGATGACGATATGCCACACAGTACTTCCAGG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTCTCGGCACCTTTTCTaGTTTCACTTGGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTSRHLF*FHLVTP
Trigger: AGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGA...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCTCTTCCTGAAGAGATaGTTCTCGAACTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWLFLKR*FSNFFK
Trigger: CTTGAAGAAGTTCGAGAACCATCTCTTCAGGAAGAG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCTCTTCCTGAAGAGATaGTTCTCGAACTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNLFLKR*FSNFFK
Trigger: CTTGAAGAAGTTCGAGAACCATCTCTTCAGGAAGAG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCTACTGTCATTCTCATaGTACTGGAGCCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: TTLISFYGTAITGTSTHNLLSFS*YWSQGI
Trigger: AATTCCTTGGCTCCAGTACCATGAGAATGACAGTAG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGGTCTTCGCTCACACTaGAGTCATCTTCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFGLRSH*SHLQGC
Trigger: ACAACCTTGAAGATGACTCCAGTGTGAGCGAAGACC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGGTCTTCGCTCACACTaGAGTCATCTTCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTGLRSH*SHLQGC
Trigger: ACAACCTTGAAGATGACTCCAGTGTGAGCGAAGACC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGGTCTTCGCTCACACTaGAGTCATCTTCAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDGLRSH*SHLQGC
Trigger: ACAACCTTGAAGATGACTCCAGTGTGAGCGAAGACC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGCTCCTGCAGTATTGTaGATTTCAGATGGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWAPAVL*ISDGEN
Trigger: ATTTTCCCCATCTGAAATCCACAATACTGCAGGAGC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
3UTR CAA 72 bp ATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATaGTGGATTTCAGATGGGGAAAATAATCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: ISIVNFKRAPAV*WISDGENNQTR
Trigger: CCTGGTCTGATTATTTTCCCCATCTGAAATCCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCTCCTCACTATCATCTaGCCCATAAGAGTCAATATG +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTLLTII*PIRVNM
Trigger: CATATTGACTCTTATGGGGCAGATGATAGTGAGGAG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCATTATCCCCCTCACTaGTACTGTCATTCTCATGGT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTHYPPH*YCHSHG
Trigger: ACCATGAGAATGACAGTAGCAGTGAGGGGGATAATG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR GCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCAAGCTTTTACGGCACTaGAATTACAGGAACATCGAC +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTKLLRH*NYRNID
Trigger: GTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTT...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000471141.1
CDS-3UTR GCA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGAAGCTTTTACGGCACTaGAATTACAGGAACATCGAC +
Preference number: 4 (lower is better)
Translates to: TATHSHSTEENKCDLTFRKLLRH*NYRNID
Trigger: GTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTT...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000471141.1
CDS-3UTR CCA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCCTTTCTTCTAAGGCCTaGAGTAGCATTCCAGTGACT +
Preference number: 4 (lower is better)
Translates to: VTATHSHSTEENKCDLTFLSSKA*SSIPVT
Trigger: AGTCACTGGAATGCTACTCCAGGCCTTAGAAGAAAG...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTATCAATATTCAGGTTaGTTCCCGAACTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTYQYSG*FPNSRC
Trigger: ACAGCGAGAGTTCGGGAACCAACCTGAATATTGATA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATAAAACTAGAGAAATGTaGAGGTGGCCCAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDKTREM*RWPSQR
Trigger: TCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTT...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTGGTTTCACGCAGTTTaGACTTGCCAGGTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDWFHAV*TCQVSD
Trigger: ATCAGAAACCTGGCAAGTCCAAACTGCGTGAAACCA...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCTCCTCACTATCATCTaGCCCATAAGAGTCAATATG +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDLLTII*PIRVNM
Trigger: CATATTGACTCTTATGGGGCAGATGATAGTGAGGAG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATAAGCTTTTACGGCACTaGAATTACAGGAACATCGAC +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDKLLRH*NYRNID
Trigger: GTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTT...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000471141.1
CDS-3UTR GCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTAAGCTTTTACGGCACTaGAATTACAGGAACATCGAC +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTKLLRH*NYRNID
Trigger: GTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTT...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000471141.1
CDS-3UTR GCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTACAAGACTGGGTTTaGAGGAAAGCCAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDLQDWV*RKARLR
Trigger: TCTAAGTCTGGCTTTCCTGCAAACCCAGTCTTGTAA...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374583.1
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTATCAATATTCAGGTTaGTTCCCGAACTCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTYQYSG*FPNSRC
Trigger: ACAGCGAGAGTTCGGGAACCAACCTGAATATTGATA...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCTCTTGGCGGATACCTaGAATAGTCCTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTLLADT*NSPHYQ
Trigger: TTGATAATGAGGACTATTCCAGGTATCCGCCAAGAG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTCTCTTCCTGAAGAGATaGTTCTCGAACTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTLFLKR*FSNFFK
Trigger: CTTGAAGAAGTTCGAGAACCATCTCTTCAGGAAGAG...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCTACTGTCATTCTCATaGTACTGGAGCCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: TLQVTATHSHSTEENKCDLLSFS*YWSQGI
Trigger: AATTCCTTGGCTCCAGTACCATGAGAATGACAGTAG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGCTCCTGCAGTATTGTaGATTTCAGATGGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: QVTATHSHSTEENKCDLTAPAVL*ISDGEN
Trigger: ATTTTCCCCATCTGAAATCCACAATACTGCAGGAGC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CCA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTCCACCTGGAAGTACTaGAATAGTCCTCATTATCAA +
Preference number: 4 (lower is better)
Translates to: KRTTLISFYGTAITGTSTSTWKY*NSPHYQ
Trigger: TTGATAATGAGGACTATTCCAGTACTTCCAGGTGGA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374584.3
CDS GCA 90 bp AAGCAGAGCTCTCGGATCTCCGACCGCCACGACCGCCAGAGCCGCTaGTCCCGGTCCCGAGCTCCTCCCCCGCCAGACAGCAGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: KQSSRISDRHDRQSR*SRSRAPPPPDSSGA
Trigger: CGCCCCGCTGCTGTCTGGCGGGGGAGGAGCTCGGGACCGGGAGCAGCGGCTCTGGCGGTCGTGGCGGTCGGAGATCCGAGAGCTCTGCTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361478.1
CDS CCA 90 bp ACATGCAGCGGCACACGGGGCAGGTGCCTGACTTCTGAAGCCAGATaGACACACACGGCTTGTGGAAATAGTGGTGGCACGGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: TCSGTRGRCLTSEAR*THTACGNSGGTAAQ
Trigger: CTGAGCTGCCGTGCCACCACTATTTCCACAAGCCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCCGCTGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 90 bp CGCTTCCCGTTTGTCTTCAGGGTACTTTGGCTCGGGATAGCCACTTaGACTCTCGCCTCTCCCTCTTCTTGCCAGGCCATCCGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: RFPFVFRVLWLGIAT*TLASPSSCQAIRVA
Trigger: GGCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACAAACGGGAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 90 bp TTAGAGTGGGGGAGGGAACATGCAGCGGCACACGGGGCAGGTGCCTaGCTTCTGAAGCCAGATGGACACACACGGCTTGTGGAAATAGTG +
Preference number: 5 (lower is better)
Translates to: LEWGREHAAAHGAGA*LLKPDGHTRLVEIV
Trigger: CACTATTTCCACAAGCCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCCGCTGCATGTTCCCTCCCCCACTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 90 bp GGACACACACGGCTTGTGGAAATAGTGGTGGCACGGCAGCTCAGTTaGCACCTCCCCCTTCACATATTCGCTACAGCAGATGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GHTRLVEIVVARQLS*HLPLHIFATADGAA
Trigger: TGCTGCCCCATCTGCTGTAGCGAATATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGCCACCACTATTTCCACAAGCCGTGTGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 90 bp GTCTTTAGAGTGGGGGAGGGAACATGCAGCGGCACACGGGGCAGGTaGCTGACTTCTGAAGCCAGATGGACACACACGGCTTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VFRVGEGTCSGTRGR*LTSEARWTHTACGN
Trigger: ATTTCCACAAGCCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCCGCTGCATGTTCCCTCCCCCACTCTAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 90 bp CCACTTGAACTCTCGCCTCTCCCTCTTCTTGCCAGGCCATCCGAGTaGCCCTCATTGTCATTGGCGGTATCCCTCCACCTGGAAGTACTG +
Preference number: 5 (lower is better)
Translates to: PLELSPLPLLARPSE*PSLSLAVSLHLEVL
Trigger: CAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGCGAGAGTTCAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 90 bp GGGCTGATCTGTGCATTGGGACTTCGGAGTTCGTCTTTCTCTGGCTaGCAATCCTTTCCCGCTGGCTCGTGGGTGGCCAAGTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: GLICALGLRSSSFSG*QSFPAGSWVAKSRK
Trigger: CTTTCTGGACTTGGCCACCCACGAGCCAGCGGGAAAGGATTGCCAGCCAGAGAAAGACGAACTCCGAAGTCCCAATGCACAGATCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477231.1
CDS CCA 90 bp TCGGCCATGGTGCGTCGTCGTCTCGGCACCTTTTCTGGTTTCACTTaGTCACTCCTCGCTTCCCGTTTGTCTTCAGGGTACTTTGGCTCG +
Preference number: 5 (lower is better)
Translates to: SAMVRRRLGTFSGFT*SLLASRLSSGYFGS
Trigger: CGAGCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 90 bp GAAGTCAGGGTCGGCCATGGTGCGTCGTCGTCTCGGCACCTTTTCTaGTTTCACTTGGTCACTCCTCGCTTCCCGTTTGTCTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: EVRVGHGASSSRHLF*FHLVTPRFPFVFRV
Trigger: TACCCTGAAGACAAACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGACCCTGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 90 bp AGTGGAAAATGGCGATCGGCTCCTCTTGGTGGTTTGACTGGGGGCTaGTCTGTGCATTGGGACTTCGGAGTTCGTCTTTCTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SGKWRSAPLGGLTGG*SVHWDFGVRLSLAG
Trigger: GCCAGCCAGAGAAAGACGAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGCCATTTTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS TCA 90 bp AGATGGGGCAGCACATCTCCTGACCAACTGCGCCATGATCTTCAGTaGCCAGGATCTCGGGAAGAGCGTCAATGCTCTCCTTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RWGSTSPDQLRHDLQ*PGSREERQCSPCLL
Trigger: CAGCAAGCAAGGAGAGCATTGACGCTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCGCAGTTGGTCAGGAGATGTGCTGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 90 bp TGGCGGTCGCTCAACAGGCCCAGCCCCCTCCTCCTCACTATCATCTaGCCCATAAGAGTCAATATGTCCATAGGCCATTCCTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: WRSLNRPSPLLLTII*PIRVNMSIGHSSSA
Trigger: AGCAGAAGAGGAATGGCCTATGGACATATTGACTCTTATGGGGCAGATGATAGTGAGGAGGAGGGGGCTGGGCCTGTTGAGCGACCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS GCA 90 bp CCACAAATACTCACAGGAGCCCTGCTGGGACGTGCAGGTAAATTTTaGTCCCTTCTCTCCCTCTCCGAGCTGTCACCTTTTGTAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PQILTGALLGRAGKF*SLLSLSELSPFVAS
Trigger: GCTGGCTACAAAAGGTGACAGCTCGGAGAGGGAGAGAAGGGAGCAAAATTTACCTGCACGTCCCAGCAGGGCTCCTGTGAGTATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS GCA 90 bp TGTAGTAATCATCACTGTGCGTCCAGAAGTCAGGGTCGGCCATGGTaGGTCGTCGTCTCGGCACCTTTTCTGGTTTCACTTGGTCACTCC +
Preference number: 5 (lower is better)
Translates to: CSNHHCASRSQGRPW*VVVSAPFLVSLGHS
Trigger: GGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGACCCTGACTTCTGGACGCACAGTGATGATTACTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 90 bp CTACGACGAGTAGTGGAAAATGGCGATCGGCTCCTCTTGGTGGTTTaGCTGGGGGCTGATCTGTGCATTGGGACTTCGGAGTTCGTCTTT +
Preference number: 5 (lower is better)
Translates to: LRRVVENGDRLLLVV*LGADLCIGTSEFVF
Trigger: AAAGACGAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGCCATTTTCCACTACTCGTCGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS GCA 90 bp CACATATTCGCTACAGCAGATGGGGCAGCACATCTCCTGACCAACTaGGCCATGATCTTCAGTGACCAGGATCTCGGGAAGAGCGTCAAT +
Preference number: 5 (lower is better)
Translates to: HIFATADGAAHLLTN*AMIFSDQDLGKSVN
Trigger: ATTGACGCTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCGCAGTTGGTCAGGAGATGTGCTGCCCCATCTGCTGTAGCGAATATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 90 bp TCGCTCCTCTCTCACATCACGGCTAAAACTAGAGAAATGTGGAGGTaGCCCAGCCAAAGACCTTGCCCCTTTCTCTGGGTCATACAGCTT +
Preference number: 5 (lower is better)
Translates to: SLLSHITAKTREMWR*PSQRPCPFLWVIQL
Trigger: AAGCTGTATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTTAGCCGTGATGTGAGAGAGGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS CCA 90 bp ATTTGTAGTAATCATCACTGTGCGTCCAGAAGTCAGGGTCGGCCATaGTGCGTCGTCGTCTCGGCACCTTTTCTGGTTTCACTTGGTCAC +
Preference number: 5 (lower is better)
Translates to: ICSNHHCASRSQGRP*CVVVSAPFLVSLGH
Trigger: GTGACCAAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGACCCTGACTTCTGGACGCACAGTGATGATTACTACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 90 bp GGCCATCCGAGTGGCCCTCATTGTCATTGGCGGTATCCCTCCACCTaGAAGTACTGTGTGGCATATCGTCATCATCATCAGTATCAAAAA +
Preference number: 5 (lower is better)
Translates to: GHPSGPHCHWRYPST*KYCVAYRHHHQYQK
Trigger: TTTTTGATACTGATGATGATGACGATATGCCACACAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACTCGGATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS GCA 90 bp CATCTGCCCCATAAGAGTCAATATGTCCATAGGCCATTCCTCTTCTaGTACCCGAAGCTCTGTACTCTCTTGGCGGATACCTGGAATAGT +
Preference number: 5 (lower is better)
Translates to: HLPHKSQYVHRPFLF*YPKLCTLLADTWNS
Trigger: ACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAATGGCCTATGGACATATTGACTCTTATGGGGCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGCTCGGGATAGCCACTaGAACTCTCGCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKARDSH*NSRLSL
Trigger: GAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGCTCGGGATAGCCACTaGAACTCTCGCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: AFTALQLQEHRPITCNKNARDSH*NSRLSL
Trigger: GAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGGCACGGCAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWGTAAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGCC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 90 bp ACGGCTAAAACTAGAGAAATGTGGAGGTGGCCCAGCCAAAGACCTTaGCCCTTTCTCTGGGTCATACAGCTTATCATCTTTAAACTTGCC +
Preference number: 5 (lower is better)
Translates to: TAKTREMWRWPSQRP*PFLWVIQLIIFKLA
Trigger: GGCAAGTTTAAAGATGATAAGCTGTATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTTAGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGCCCAGCCAAAGACCTaGCCCCTTTCTCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKAQPKT*PLSLGH
Trigger: ATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGGC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGGCCCTCATTGTCATaGGCGGTATCCCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKWPSLS*AVSLHL
Trigger: CAGGTGGAGGGATACCGCCAATGACAATGAGGGCCA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTCCGAGTGGCCCTCATaGTCATTGGCGGTATCCCTC +
Preference number: 5 (lower is better)
Translates to: AFTALQLQEHRPITCNKNSEWPS*SLAVSL
Trigger: GAGGGATACCGCCAATGACAATGAGGGCCACTCGGA...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAACAAGGGCAGTTTCCATaGCCTGGGCCAGGCGTTCTT +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKQGQFP*PGPGVL
Trigger: AAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTTG...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGGCACGGCAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRGTAAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGCC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 90 bp TTGTTGTTTCCATCCAGCATGAATACCCCAGGTTGCATCAACTCGTaGCCAGAATCATTATCCCCCTCACTGCTACTGTCATTCTCATGG +
Preference number: 5 (lower is better)
Translates to: LLFPSSMNTPGCINS*PESLSPSLLLSFSW
Trigger: CCATGAGAATGACAGTAGCAGTGAGGGGGATAATGATTCTGGTCACGAGTTGATGCAACCTGGGGTATTCATGCTGGATGGAAACAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 90 bp TTCCTCTTCTGCTACCCGAAGCTCTGTACTCTCTTGGCGGATACCTaGAATAGTCCTCATTATCAATATTCAGGTTGGTTCCCGAACTCT +
Preference number: 5 (lower is better)
Translates to: FLFCYPKLCTLLADT*NSPHYQYSGWFPNS
Trigger: AGAGTTCGGGAACCAACCTGAATATTGATAATGAGGACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS CCA 90 bp TCCATAGGCCATTCCTCTTCTGCTACCCGAAGCTCTGTACTCTCTTaGCGGATACCTGGAATAGTCCTCATTATCAATATTCAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: SIGHSSSATRSSVLS*RIPGIVLIINIQVG
Trigger: ACCAACCTGAATATTGATAATGAGGACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAATGGCCTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACGCCCAGCCAAAGACCTaGCCCCTTTCTCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNAQPKT*PLSLGH
Trigger: ATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGGC...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAAGCCAGGTTTCTGATTTaGGGCCTGACCACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKARFLI*GLTTGS
Trigger: GGAACCTGTGGTCAGGCCCAAAATCAGAAACCTGGC...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATTGGCCCTCATTGTCATaGGCGGTATCCCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: FTALQLQEHRPITCNKNDWPSLS*AVSLHL
Trigger: CAGGTGGAGGGATACCGCCAATGACAATGAGGGCCA...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACTGGCCCTCATTGTCATaGGCGGTATCCCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNWPSLS*AVSLHL
Trigger: CAGGTGGAGGGATACCGCCAATGACAATGAGGGCCA...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGTCCGAGTGGCCCTCATaGTCATTGGCGGTATCCCTC +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWSEWPS*SLAVSL
Trigger: GAGGGATACCGCCAATGACAATGAGGGCCACTCGGA...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCGCTCGGGATAGCCACTaGAACTCTCGCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTARDSH*NSRLSL
Trigger: GAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGC...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGCTCGGGATAGCCACTaGAACTCTCGCCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRARDSH*NSRLSL
Trigger: GAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAACTCCTCGCTTCCCGTTaGTCTTCAGGGTACTTTGGC +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKLLASR*SSGYFG
Trigger: GCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAG...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCAAGGGCAGTTTCCATaGCCTGGGCCAGGCGTTCTT +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNQGQFP*PGPGVL
Trigger: AAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTTG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATCAAGGGCAGTTTCCATaGCCTGGGCCAGGCGTTCTT +
Preference number: 5 (lower is better)
Translates to: FTALQLQEHRPITCNKNDQGQFP*PGPGVL
Trigger: AAGAACGCCTGGCCCAGGCAATGGAAACTGCCCTTG...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGGCACGGCAGCTCAGTaGCCACCTCCCCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: VTATHSHSTEENKCDLTFGTAAQ*PPPPSH
Trigger: ATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGCC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATACCCTCCTGTTGGATaGGGCCATACAGGCTTGCTA +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKYPPVG*GHTGLL
Trigger: TAGCAAGCCTGTATGGCCCAATCCAACAGGAGGGTA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGGCCCAGCCAAAGACCTaGCCCCTTTCTCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRAQPKT*PLSLGH
Trigger: ATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGGC...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGCCAGGTTTCTGATTTaGGGCCTGACCACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: FTALQLQEHRPITCNKNDARFLI*GLTTGS
Trigger: GGAACCTGTGGTCAGGCCCAAAATCAGAAACCTGGC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTGGCCCTCATTGTCATaGGCGGTATCCCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTWPSLS*AVSLHL
Trigger: CAGGTGGAGGGATACCGCCAATGACAATGAGGGCCA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTCCGAGTGGCCCTCATaGTCATTGGCGGTATCCCTC +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTSEWPS*SLAVSL
Trigger: GAGGGATACCGCCAATGACAATGAGGGCCACTCGGA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTGTCTTCAGGGTACTTaGGCTCGGGATAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: AFTALQLQEHRPITCNKNCLQGT*ARDSHL
Trigger: CAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACA...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGCTCCTCGCTTCCCGTTaGTCTTCAGGGTACTTTGGC +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWLLASR*SSGYFG
Trigger: GCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAG...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCTCCTCGCTTCCCGTTaGTCTTCAGGGTACTTTGGC +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNLLASR*SSGYFG
Trigger: GCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTGCTTGCTGGTGGATaGGCCACCTCTACATCCACT +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKLLAGG*ATSTST
Trigger: AGTGGATGTAGAGGTGGCCAATCCACCAGCAAGCAA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACGTTCCTCTGCACTCTTaGAGGTGTTTTCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNVPLHS*RCFPHH
Trigger: GTGGTGGGGAAAACACCTCAAAGAGTGCAGAGGAAC...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGTTCCTCTGCACTCTTaGAGGTGTTTTCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWVPLHS*RCFPHH
Trigger: GTGGTGGGGAAAACACCTCAAAGAGTGCAGAGGAAC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACTGTCTTCAGGGTACTTaGGCTCGGGATAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNCLQGT*ARDSHL
Trigger: CAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACA...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGTGTCTTCAGGGTACTTaGGCTCGGGATAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWCLQGT*ARDSHL
Trigger: CAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACA...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATACTGGAGGACAGGGTTaGCTCTCGGCTTCGATATTT +
Preference number: 5 (lower is better)
Translates to: AFTALQLQEHRPITCNKNTGGQG*LSASIF
Trigger: AAATATCGAAGCCGAGAGCAAACCCTGTCCTCCAGT...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATTTGCTTGCTGGTGGATaGGCCACCTCTACATCCACT +
Preference number: 5 (lower is better)
Translates to: FTALQLQEHRPITCNKNDLLAGG*ATSTST
Trigger: AGTGGATGTAGAGGTGGCCAATCCACCAGCAAGCAA...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTACCCTCCTGTTGGATaGGGCCATACAGGCTTGCTA +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRYPPVG*GHTGLL
Trigger: TAGCAAGCCTGTATGGCCCAATCCAACAGGAGGGTA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGGGCTGATCTGTGCATaGGGACTTCGGAGTTCGTCT +
Preference number: 5 (lower is better)
Translates to: VTATHSHSTEENKCDLTFGLICA*GLRSSS
Trigger: AGACGAACTCCGAAGTCCCAATGCACAGATCAGCCC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTGGGCTGATCTGTGCATaGGGACTTCGGAGTTCGTCT +
Preference number: 5 (lower is better)
Translates to: QVTATHSHSTEENKCDLTGLICA*GLRSSS
Trigger: AGACGAACTCCGAAGTCCCAATGCACAGATCAGCCC...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGGGCTGATCTGTGCATaGGGACTTCGGAGTTCGTCT +
Preference number: 5 (lower is better)
Translates to: TLQVTATHSHSTEENKCDGLICA*GLRSSS
Trigger: AGACGAACTCCGAAGTCCCAATGCACAGATCAGCCC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGCCAGGTTTCTGATTTaGGGCCTGACCACAGGTTCC +
Preference number: 5 (lower is better)
Translates to: TLQVTATHSHSTEENKCDARFLI*GLTTGS
Trigger: GGAACCTGTGGTCAGGCCCAAAATCAGAAACCTGGC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTGTCTTCAGGGTACTTaGGCTCGGGATAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRCLQGT*ARDSHL
Trigger: CAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGCAGCAATCCACTCTTaGTCACTGTCAGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWAAIHS*SLSESS
Trigger: CGAAGACTCTGACAGTGACAAAGAGTGGATTGCTGC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACGCAGCAATCCACTCTTaGTCACTGTCAGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNAAIHS*SLSESS
Trigger: CGAAGACTCTGACAGTGACAAAGAGTGGATTGCTGC...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACCATGAATACCCCAGGTaGCATCAACTCGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNHEYPR*HQLVTR
Trigger: TCTGGTCACGAGTTGATGCAACCTGGGGTATTCATG...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTTGCTTGCTGGTGGATaGGCCACCTCTACATCCACT +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTLLAGG*ATSTST
Trigger: AGTGGATGTAGAGGTGGCCAATCCACCAGCAAGCAA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTTGCTTGCTGGTGGATaGGCCACCTCTACATCCACT +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLLAGG*ATSTST
Trigger: AGTGGATGTAGAGGTGGCCAATCCACCAGCAAGCAA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACAGGGCTCCTGCAGTATaGTGGATTTCAGATGGGGAA +
Preference number: 5 (lower is better)
Translates to: TTLISFYGTAITGTSTHNRAPAV*WISDGE
Trigger: TTCCCCATCTGAAATCCACAATACTGCAGGAGCCCT...GTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTTATCAATATTCAGGTaGGTTCCCGAACTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: AFTALQLQEHRPITCNKNLSIFR*VPELSL
Trigger: CAGCGAGAGTTCGGGAACCAACCTGAATATTGATAA...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATAAGCTCTGTACTCTCTaGGCGGATACCTGGAATAGT +
Preference number: 5 (lower is better)
Translates to: FTALQLQEHRPITCNKNDKLCTL*ADTWNS
Trigger: ACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTT...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCACTGGAGGACAGGGTTaGCTCTCGGCTTCGATATTT +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTTGGQG*LSASIF
Trigger: AAATATCGAAGCCGAGAGCAAACCCTGTCCTCCAGT...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATGAATACCCCAGGTaGCATCAACTCGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTHEYPR*HQLVTR
Trigger: TCTGGTCACGAGTTGATGCAACCTGGGGTATTCATG...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGCATGAATACCCCAGGTaGCATCAACTCGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRHEYPR*HQLVTR
Trigger: TCTGGTCACGAGTTGATGCAACCTGGGGTATTCATG...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGAGTCATCTTCAAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: AFTALQLQEHRPITCNKNESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTTGAAGATGACTC...ATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCAAGCTCTGTACTCTCTaGGCGGATACCTGGAATAGT +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTKLCTL*ADTWNS
Trigger: ACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTT...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGCAGCAATCCACTCTTaGTCACTGTCAGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: TLQVTATHSHSTEENKCDAAIHS*SLSESS
Trigger: CGAAGACTCTGACAGTGACAAAGAGTGGATTGCTGC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCGCAGCAATCCACTCTTaGTCACTGTCAGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VTATHSHSTEENKCDLTFAAIHS*SLSESS
Trigger: CGAAGACTCTGACAGTGACAAAGAGTGGATTGCTGC...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTACTGGAGGACAGGGTTaGCTCTCGGCTTCGATATTT +
Preference number: 5 (lower is better)
Translates to: QVTATHSHSTEENKCDLTTGGQG*LSASIF
Trigger: AAATATCGAAGCCGAGAGCAAACCCTGTCCTCCAGT...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATCATGAATACCCCAGGTaGCATCAACTCGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: TLQVTATHSHSTEENKCDHEYPR*HQLVTR
Trigger: TCTGGTCACGAGTTGATGCAACCTGGGGTATTCATG...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp TTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATGATGAGTCATCTTCAAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: FTALQLQEHRPITCNKNDESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTTGAAGATGACTC...ATCATTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGGAGTCATCTTCAAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTTGAAGATGACTC...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTTATCAATATTCAGGTaGGTTCCCGAACTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLSIFR*VPELSL
Trigger: CAGCGAGAGTTCGGGAACCAACCTGAATATTGATAA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTTATCAATATTCAGGTaGGTTCCCGAACTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTLSIFR*VPELSL
Trigger: CAGCGAGAGTTCGGGAACCAACCTGAATATTGATAA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAAGCTCTGTACTCTCTaGGCGGATACCTGGAATAGT +
Preference number: 5 (lower is better)
Translates to: VTATHSHSTEENKCDLTFKLCTL*ADTWNS
Trigger: ACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTT...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp GTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCTTATCAATATTCAGGTaGGTTCCCGAACTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: VTATHSHSTEENKCDLTFLSIFR*VPELSL
Trigger: CAGCGAGAGTTCGGGAACCAACCTGAATATTGATAA...GAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp AGCTTTTACGGCACTGCAATTACAGGAACATCGACCCATAACATGCAACAAAAATTATCATCTTTAAACTaGCCAGTTTTCCCTCTCACT +
Preference number: 5 (lower is better)
Translates to: SFYGTAITGTSTHNMQQKLSSLN*PVFPLT
Trigger: AGTGAGAGGGAAAACTGGCAAGTTTAAAGATGATAA...TTTTTGTTGCATGTTATGGGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp ACATTACAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATGAGTCATCTTCAAGGTaGTTGTTTCCATCCAGCATG +
Preference number: 5 (lower is better)
Translates to: TLQVTATHSHSTEENKCDESSSR*LFPSSM
Trigger: CATGCTGGATGGAAACAACAACCTTGAAGATGACTC...ATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTGTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp CTGATTGGTTTTATTTCCATTGTTAATTTCAAGAGGGCTCCTGCAGTATTGTGGTTATCATCTTTAAACTaGCCAGTTTTCCCTCTCACT +
Preference number: 5 (lower is better)
Translates to: LIGFISIVNFKRAPAVLWLSSLN*PVFPLT
Trigger: AGTGAGAGGGAAAACTGGCAAGTTTAAAGATGATAA...CCACAATACTGCAGGAGCCCTCTTGAAATTAACAATGGAAATAAAACCAATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp AAAAGAACAACTTTAATAAGCTTTTACGGCACTGCAATTACAGGAACATCGACCTCATCTTCAAGGTTGTaGTTTCCATCCAGCATGAAT +
Preference number: 5 (lower is better)
Translates to: KRTTLISFYGTAITGTSTSSSRL*FPSSMN
Trigger: ATTCATGCTGGATGGAAACAACAACCTTGAAGATGA...GGTCGATGTTCCTGTAATTGCAGTGCCGTAAAAGCTTATTAAAGTTGTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTCATCTTCAAGGTTGTaGTTTCCATCCAGCATGAAT +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRSSSRL*FPSSMN
Trigger: ATTCATGCTGGATGGAAACAACAACCTTGAAGATGA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS-3UTR CAA 90 bp ACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTTCAGGTTATCATCTTTAAACTaGCCAGTTTTCCCTCTCACT +
Preference number: 5 (lower is better)
Translates to: TATHSHSTEENKCDLTFRLSSLN*PVFPLT
Trigger: AGTGAGAGGGAAAACTGGCAAGTTTAAAGATGATAA...CCTGAAAGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS-3UTR CAA 90 bp CAAGTAACAGCAACACATTCCCATTCTACTGAAGAAAACAAATGCGATTTAACTTCATCTTCAAGGTTGTaGTTTCCATCCAGCATGAAT +
Preference number: 5 (lower is better)
Translates to: QVTATHSHSTEENKCDLTSSSRL*FPSSMN
Trigger: ATTCATGCTGGATGGAAACAACAACCTTGAAGATGA...AGTTAAATCGCATTTGTTTTCTTCAGTAGAATGGGAATGTGTTGCTGTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 72 bp TCTCGGATCTCCGACCGCCACGACCGCCAGAGCCGCTaGTCCCGGTCCCGAGCTCCTCCCCCGCCAGACAGC +
Preference number: 6 (lower is better)
Translates to: SRISDRHDRQSR*SRSRAPPPPDS
Trigger: GCTGTCTGGCGGGGGAGGAGCTCGGGACCGGGAGCAGCGGCTCTGGCGGTCGTGGCGGTCGGAGATCCGAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361478.1
CDS GCA 72 bp GTGGGGGAGGGAACATGCAGCGGCACACGGGGCAGGTaGCTGACTTCTGAAGCCAGATGGACACACACGGCT +
Preference number: 6 (lower is better)
Translates to: VGEGTCSGTRGR*LTSEARWTHTA
Trigger: AGCCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCCGCTGCATGTTCCCTCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 72 bp GGGAGGGAACATGCAGCGGCACACGGGGCAGGTGCCTaGCTTCTGAAGCCAGATGGACACACACGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: GREHAAAHGAGA*LLKPDGHTRLV
Trigger: CACAAGCCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCCGCTGCATGTTCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp AGGGCTGGTGCCAGTGCTGGCACTCACCTTAGCCTGTaGAGGTTCCCGCTCTTCTTTCCCCGGCAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: RAGASAGTHLSL*RFPLFFPRQSL
Trigger: GAGACTCTGCCGGGGAAAGAAGAGCGGGAACCTCCACAGGCTAAGGTGAGTGCCAGCACTGGCACCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp CTCTCGCCTCTCCCTCTTCTTGCCAGGCCATCCGAGTaGCCCTCATTGTCATTGGCGGTATCCCTCCACCTG +
Preference number: 6 (lower is better)
Translates to: LSPLPLLARPSE*PSLSLAVSLHL
Trigger: CAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGCGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp GGCACACGGGGCAGGTGCCTGACTTCTGAAGCCAGATaGACACACACGGCTTGTGGAAATAGTGGTGGCACG +
Preference number: 6 (lower is better)
Translates to: GTRGRCLTSEAR*THTACGNSGGT
Trigger: CGTGCCACCACTATTTCCACAAGCCGTGTGTGTCCATCTGGCTTCAGAAGTCAGGCACCTGCCCCGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CAA 90 bp TCGCTTCCCGTTTGTCTTCAGGGTACTTTGGCTCGGGATAGCCACTaGAACTCTCGCCTCTCCCTCTTCTTGCCAGGCCATCCGAGTGGC +
Preference number: 6 (lower is better)
Translates to: SLPVCLQGTLARDSH*NSRLSLFLPGHPSG
Trigger: GCCACTCGGATGGCCTGGCAAGAAGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACAAACGGGAAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp GATCTGTGCATTGGGACTTCGGAGTTCGTCTTTCTCTaGCTGGCAATCCTTTCCCGCTGGCTCGTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: DLCIGTSEFVFL*LAILSRWLVGG
Trigger: GCCACCCACGAGCCAGCGGGAAAGGATTGCCAGCCAGAGAAAGACGAACTCCGAAGTCCCAATGCACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS CCA 72 bp CTCGCTGTCGTCCCAACTACGACGAGTAGTGGAAAATaGCGATCGGCTCCTCTTGGTGGTTTGACTGGGGGC +
Preference number: 6 (lower is better)
Translates to: LAVVPTTTSSGK*RSAPLGGLTGG
Trigger: GCCCCCAGTCAAACCACCAAGAGGAGCCGATCGCCATTTTCCACTACTCGTCGTAGTTGGGACGACAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS CCA 72 bp GTCGGCCATGGTGCGTCGTCGTCTCGGCACCTTTTCTaGTTTCACTTGGTCACTCCTCGCTTCCCGTTTGTC +
Preference number: 6 (lower is better)
Translates to: VGHGASSSRHLF*FHLVTPRFPFV
Trigger: GACAAACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp AATCAGACCAGGAGTAAACGGCCTTGGTCTTTAGAGTaGGGGAGGGAACATGCAGCGGCACACGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: NQTRSKRPWSLE*GREHAAAHGAG
Trigger: ACCTGCCCCGTGTGCCGCTGCATGTTCCCTCCCCCACTCTAAAGACCAAGGCCGTTTACTCCTGGTCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp TGTGCATTGGGACTTCGGAGTTCGTCTTTCTCTGGCTaGCAATCCTTTCCCGCTGGCTCGTGGGTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: CALGLRSSSFSG*QSFPAGSWVAK
Trigger: CTTGGCCACCCACGAGCCAGCGGGAAAGGATTGCCAGCCAGAGAAAGACGAACTCCGAAGTCCCAATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477231.1
CDS CAA 72 bp CTTCTTGCCAGGCCATCCGAGTGGCCCTCATTGTCATaGGCGGTATCCCTCCACCTGGAAGTACTGTGTGGC +
Preference number: 6 (lower is better)
Translates to: LLARPSEWPSLS*AVSLHLEVLCG
Trigger: GCCACACAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACTCGGATGGCCTGGCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS CAA 72 bp CTCCCTCTTCTTGCCAGGCCATCCGAGTGGCCCTCATaGTCATTGGCGGTATCCCTCCACCTGGAAGTACTG +
Preference number: 6 (lower is better)
Translates to: LPLLARPSEWPS*SLAVSLHLEVL
Trigger: CAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACTCGGATGGCCTGGCAAGAAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CAA 90 bp GCGATCGGCTCCTCTTGGTGGTTTGACTGGGGGCTGATCTGTGCATaGGGACTTCGGAGTTCGTCTTTCTCTGGCTGGCAATCCTTTCCC +
Preference number: 6 (lower is better)
Translates to: AIGSSWWFDWGLICA*GLRSSSFSGWQSFP
Trigger: GGGAAAGGATTGCCAGCCAGAGAAAGACGAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS CAA 90 bp GTCGGCCATGGTGCGTCGTCGTCTCGGCACCTTTTCTGGTTTCACTaGGTCACTCCTCGCTTCCCGTTTGTCTTCAGGGTACTTTGGCTC +
Preference number: 6 (lower is better)
Translates to: VGHGASSSRHLFWFH*VTPRFPFVFRVLWL
Trigger: GAGCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 72 bp CATCACTGTGCGTCCAGAAGTCAGGGTCGGCCATGGTaGGTCGTCGTCTCGGCACCTTTTCTGGTTTCACTT +
Preference number: 6 (lower is better)
Translates to: HHCASRSQGRPW*VVVSAPFLVSL
Trigger: AAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGACCCTGACTTCTGGACGCACAGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 72 bp CCTGAAGAGATGGTTCTCGAACTTCTTCAAGGTAATTaGTGCCATTGCTGCCAGCACTGGCCCCGGCGCCAG +
Preference number: 6 (lower is better)
Translates to: PEEMVLELLQGN*CHCCQHWPRRQ
Trigger: CTGGCGCCGGGGCCAGTGCTGGCAGCAATGGCAGCAATTACCTTGAAGAAGTTCGAGAACCATCTCTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 72 bp GCTACAGCAGATGGGGCAGCACATCTCCTGACCAACTaGGCCATGATCTTCAGTGACCAGGATCTCGGGAAG +
Preference number: 6 (lower is better)
Translates to: ATADGAAHLLTN*AMIFSDQDLGK
Trigger: CTTCCCGAGATCCTGGTCACTGAAGATCATGGCGCAGTTGGTCAGGAGATGTGCTGCCCCATCTGCTGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp TTCTTGCCAGGCCATCCGAGTGGCCCTCATTGTCATTaGCGGTATCCCTCCACCTGGAAGTACTGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: FLPGHPSGPHCH*RYPSTWKYCVA
Trigger: TGCCACACAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACTCGGATGGCCTGGCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
CDS CAA 72 bp GGTCACTCCTCGCTTCCCGTTTGTCTTCAGGGTACTTaGGCTCGGGATAGCCACTTGAACTCTCGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: GHSSLPVCLQGT*ARDSHLNSRLS
Trigger: GGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 72 bp TGGCGATCGGCTCCTCTTGGTGGTTTGACTGGGGGCTaGTCTGTGCATTGGGACTTCGGAGTTCGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: WRSAPLGGLTGG*SVHWDFGVRLS
Trigger: AGAAAGACGAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS TCA 72 bp GTAGTGGAAAATGGCGATCGGCTCCTCTTGGTGGTTTaGCTGGGGGCTGATCTGTGCATTGGGACTTCGGAG +
Preference number: 6 (lower is better)
Translates to: VVENGDRLLLVV*LGADLCIGTSE
Trigger: CTCCGAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACCACCAAGAGGAGCCGATCGCCATTTTCCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS GCA 72 bp CGGCTTGTGGAAATAGTGGTGGCACGGCAGCTCAGTTaGCACCTCCCCCTTCACATATTCGCTACAGCAGAT +
Preference number: 6 (lower is better)
Translates to: RLVEIVVARQLS*HLPLHIFATAD
Trigger: ATCTGCTGTAGCGAATATGTGAAGGGGGAGGTGGCAACTGAGCTGCCGTGCCACCACTATTTCCACAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp GTGCGTCGTCGTCTCGGCACCTTTTCTGGTTTCACTTaGTCACTCCTCGCTTCCCGTTTGTCTTCAGGGTAC +
Preference number: 6 (lower is better)
Translates to: VRRRLGTFSGFT*SLLASRLSSGY
Trigger: GTACCCTGAAGACAAACGGGAAGCGAGGAGTGACCAAGTGAAACCAGAAAAGGTGCCGAGACGACGACGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp AATCATCACTGTGCGTCCAGAAGTCAGGGTCGGCCATaGTGCGTCGTCGTCTCGGCACCTTTTCTGGTTTCA +
Preference number: 6 (lower is better)
Translates to: NHHCASRSQGRP*CVVVSAPFLVS
Trigger: TGAAACCAGAAAAGGTGCCGAGACGACGACGCACCATGGCCGACCCTGACTTCTGGACGCACAGTGATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp TTGCCACCTCCCCCTTCACATATTCGCTACAGCAGATaGGGCAGCACATCTCCTGACCAACTGCGCCATGAT +
Preference number: 6 (lower is better)
Translates to: LPPPPSHIRYSR*GSTSPDQLRHD
Trigger: ATCATGGCGCAGTTGGTCAGGAGATGTGCTGCCCCATCTGCTGTAGCGAATATGTGAAGGGGGAGGTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 72 bp TTTGTCTTCAGGGTACTTTGGCTCGGGATAGCCACTTaGACTCTCGCCTCTCCCTCTTCTTGCCAGGCCATC +
Preference number: 6 (lower is better)
Translates to: FVFRVLWLGIAT*TLASPSSCQAI
Trigger: GATGGCCTGGCAAGAAGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 72 bp AGCACATCTCCTGACCAACTGCGCCATGATCTTCAGTaGCCAGGATCTCGGGAAGAGCGTCAATGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: STSPDQLRHDLQ*PGSREERQCSP
Trigger: AGGAGAGCATTGACGCTCTTCCCGAGATCCTGGTCACTGAAGATCATGGCGCAGTTGGTCAGGAGATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp TTTCCCCACCACCACAAATACTCACAGGAGCCCTGCTaGGACGTGCAGGTAAATTTTGCTCCCTTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: FPHHHKYSQEPC*DVQVNFAPFSP
Trigger: GGGAGAGAAGGGAGCAAAATTTACCTGCACGTCCCAGCAGGGCTCCTGTGAGTATTTGTGGTGGTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS CCA 72 bp TTCTTGCCAGGCCATCCGAGTGGCCCTCATTGTCATTaGCGGTATCCCTCCACCTGGAAGTACTGGAATAGT +
Preference number: 6 (lower is better)
Translates to: FLPGHPSGPHCH*RYPSTWKYWNS
Trigger: ACTATTCCAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACTCGGATGGCCTGGCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374584.3
CDS CAA 72 bp TCCTCTTGGTGGTTTGACTGGGGGCTGATCTGTGCATaGGGACTTCGGAGTTCGTCTTTCTCTGGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: SSWWFDWGLICA*GLRSSSFSGWQ
Trigger: TTGCCAGCCAGAGAAAGACGAACTCCGAAGTCCCAATGCACAGATCAGCCCCCAGTCAAACCACCAAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
ENST00000477231.1
ENST00000590146.1
CDS CAA 90 bp GACCTTGCCCCTTTCTCTGGGTCATACAGCTTATCATCTTTAAACTaGCCAGTTTTCCCTCTCACTGGCGGTCGCTCAACAGGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: DLAPFSGSYSLSSLN*PVFPLTGGRSTGPA
Trigger: GGCTGGGCCTGTTGAGCGACCGCCAGTGAGAGGGAAAACTGGCAAGTTTAAAGATGATAAGCTGTATGACCCAGAGAAAGGGGCAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS CAA 90 bp GTTTCACTTGGTCACTCCTCGCTTCCCGTTTGTCTTCAGGGTACTTaGGCTCGGGATAGCCACTTGAACTCTCGCCTCTCCCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: VSLGHSSLPVCLQGT*ARDSHLNSRLSLFL
Trigger: CAAGAAGAGGGAGAGGCGAGAGTTCAAGTGGCTATCCCGAGCCAAAGTACCCTGAAGACAAACGGGAAGCGAGGAGTGACCAAGTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp TCTCACATCACGGCTAAAACTAGAGAAATGTGGAGGTaGCCCAGCCAAAGACCTTGCCCCTTTCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SHITAKTREMWR*PSQRPCPFLWV
Trigger: GACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCTAGTTTTAGCCGTGATGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS TCA 72 bp ACCTTTTGTAGCCAGCTTGCCTTCAGAAGACGACTGTaGGGCCACACTACTTTGTGGCAGGAAGTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: TFCSQLAFRRRL*GHTTLWQEVSS
Trigger: AGAGCTGACTTCCTGCCACAAAGTAGTGTGGCCTCACAGTCGTCTTCTGAAGGCAAGCTGGCTACAAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000471141.1
ENST00000477231.1
CDS CCA 72 bp AGTGGCCCTCATTGTCATTGGCGGTATCCCTCCACCTaGAAGTACTGTGTGGCATATCGTCATCATCATCAG +
Preference number: 6 (lower is better)
Translates to: SGPHCHWRYPST*KYCVAYRHHHQ
Trigger: CTGATGATGATGACGATATGCCACACAGTACTTCCAGGTGGAGGGATACCGCCAATGACAATGAGGGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS CAA 72 bp CTAGCTGAGCATCTTGCTGCAGGGACTGGGTCTAACTaGTCTCGCTCCTCTCTCACATCACGGCTAAAACTA +
Preference number: 6 (lower is better)
Translates to: LAEHLAAGTGSN*SRSSLTSRLKL
Trigger: TAGTTTTAGCCGTGATGTGAGAGAGGAGCGAGACAAGTTAGACCCAGTCCCTGCAGCAAGATGCTCAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS CAA 72 bp GGTTTCACGCAGTTTGGACTTGCCAGGTTTCTGATTTaGGGCCTGACCACAGGTTCCTCTGCACTCTTTGAG +
Preference number: 6 (lower is better)
Translates to: GFTQFGLARFLI*GLTTGSSALFE
Trigger: CTCAAAGAGTGCAGAGGAACCTGTGGTCAGGCCCAAAATCAGAAACCTGGCAAGTCCAAACTGCGTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS CAA 90 bp TCAGCTCTGCTAGCTGAGCATCTTGCTGCAGGGACTGGGTCTAACTaGTCTCGCTCCTCTCTCACATCACGGCTAAAACTAGAGAAATGT +
Preference number: 6 (lower is better)
Translates to: SALLAEHLAAGTGSN*SRSSLTSRLKLEKC
Trigger: ACATTTCTCTAGTTTTAGCCGTGATGTGAGAGAGGAGCGAGACAAGTTAGACCCAGTCCCTGCAGCAAGATGCTCAGCTAGCAGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS TCA 72 bp CCATCCAGCATGAATACCCCAGGTTGCATCAACTCGTaGCCAGAATCATTATCCCCCTCACTGCTACTGTCA +
Preference number: 6 (lower is better)
Translates to: PSSMNTPGCINS*PESLSPSLLLS
Trigger: TGACAGTAGCAGTGAGGGGGATAATGATTCTGGTCACGAGTTGATGCAACCTGGGGTATTCATGCTGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS GCA 72 bp ACTAGAGAAATGTGGAGGTGGCCCAGCCAAAGACCTTaGCCCTTTCTCTGGGTCATACAGCTTATCATCTTT +
Preference number: 6 (lower is better)
Translates to: TREMWRWPSQRP*PFLWVIQLIIF
Trigger: AAAGATGATAAGCTGTATGACCCAGAGAAAGGGGCAAGGTCTTTGGCTGGGCCACCTCCACATTTCTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS GCA 72 bp GCATCAACTCGTGACCAGAATCATTATCCCCCTCACTaGTACTGTCATTCTCATGGTACTGGAGCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: ASTRDQNHYPPH*YCHSHGTGAKE
Trigger: TTCCTTGGCTCCAGTACCATGAGAATGACAGTAGCAGTGAGGGGGATAATGATTCTGGTCACGAGTTGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CAA 90 bp GTCCATAGGCCATTCCTCTTCTGCTACCCGAAGCTCTGTACTCTCTaGGCGGATACCTGGAATAGTCCTCATTATCAATATTCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: VHRPFLFCYPKLCTL*ADTWNSPHYQYSGW
Trigger: CCAACCTGAATATTGATAATGAGGACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAATGGCCTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS CAA 90 bp GTCATCTTCAAGGTTGTTGTTTCCATCCAGCATGAATACCCCAGGTaGCATCAACTCGTGACCAGAATCATTATCCCCCTCACTGCTACT +
Preference number: 6 (lower is better)
Translates to: VIFKVVVSIQHEYPR*HQLVTRIIIPLTAT
Trigger: AGTAGCAGTGAGGGGGATAATGATTCTGGTCACGAGTTGATGCAACCTGGGGTATTCATGCTGGATGGAAACAACAACCTTGAAGATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 72 bp TTTCACTTTCTTCTAAGGCCTGGAGTAGCATTCCAGTaGCTGTCAGGTGTAGACCAAGTCCAGAAAGCCACA +
Preference number: 6 (lower is better)
Translates to: FHFLLRPGVAFQ*LSGVDQVQKAT
Trigger: TGTGGCTTTCTGGACTTGGTCTACACCTGACAGTCACTGGAATGCTACTCCAGGCCTTAGAAGAAAGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361478.1
ENST00000374584.3
CDS CCA 72 bp GATACCTGGAATAGTCCTCATTATCAATATTCAGGTTaGTTCCCGAACTCTCGCTGTCGTCCCAACTACGAC +
Preference number: 6 (lower is better)
Translates to: DTWNSPHYQYSG*FPNSRCRPNYD
Trigger: GTCGTAGTTGGGACGACAGCGAGAGTTCGGGAACCAACCTGAATATTGATAATGAGGACTATTCCAGGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS CAA 72 bp CCTTTCTCTGGGTCATACAGCTTATCATCTTTAAACTaGCCAGTTTTCCCTCTCACTGGCGGTCGCTCAACA +
Preference number: 6 (lower is better)
Translates to: PFSGSYSLSSLN*PVFPLTGGRST
Trigger: TGTTGAGCGACCGCCAGTGAGAGGGAAAACTGGCAAGTTTAAAGATGATAAGCTGTATGACCCAGAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
CDS CAA 72 bp AAGGTTGTTGTTTCCATCCAGCATGAATACCCCAGGTaGCATCAACTCGTGACCAGAATCATTATCCCCCTC +
Preference number: 6 (lower is better)
Translates to: KVVVSIQHEYPR*HQLVTRIIIPL
Trigger: GAGGGGGATAATGATTCTGGTCACGAGTTGATGCAACCTGGGGTATTCATGCTGGATGGAAACAACAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS TCA 72 bp TGGAGTCATCTTCAAGGTTGTTGTTTCCATCCAGCATaGATACCCCAGGTTGCATCAACTCGTGACCAGAAT +
Preference number: 6 (lower is better)
Translates to: WSHLQGCCFHPA*IPQVASTRDQN
Trigger: ATTCTGGTCACGAGTTGATGCAACCTGGGGTATTCATGCTGGATGGAAACAACAACCTTGAAGATGACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000374584.3
CDS CCA 72 bp TGCTACCCGAAGCTCTGTACTCTCTTGGCGGATACCTaGAATAGTCCTCATTATCAATATTCAGGTTGGTTC +
Preference number: 6 (lower is better)
Translates to: CYPKLCTLLADT*NSPHYQYSGWF
Trigger: GAACCAACCTGAATATTGATAATGAGGACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS CCA 72 bp AAGTACTGGAATAGTCCTCATTATCAATATTCAGGTTaGTTCCCGAACTCTCGCTGTCGTCCCAACTACGAC +
Preference number: 6 (lower is better)
Translates to: KYWNSPHYQYSG*FPNSRCRPNYD
Trigger: GTCGTAGTTGGGACGACAGCGAGAGTTCGGGAACCAACCTGAATATTGATAATGAGGACTATTCCAGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374584.3
CDS CAA 72 bp CCATTCCTCTTCTGCTACCCGAAGCTCTGTACTCTCTaGGCGGATACCTGGAATAGTCCTCATTATCAATAT +
Preference number: 6 (lower is better)
Translates to: PFLFCYPKLCTL*ADTWNSPHYQY
Trigger: ATATTGATAATGAGGACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1
CDS CCA 72 bp CATTCCTCTTCTGCTACCCGAAGCTCTGTACTCTCTTaGCGGATACCTGGAATAGTCCTCATTATCAATATT +
Preference number: 6 (lower is better)
Translates to: HSSSATRSSVLS*RIPGIVLIINI
Trigger: AATATTGATAATGAGGACTATTCCAGGTATCCGCCAAGAGAGTACAGAGCTTCGGGTAGCAGAAGAGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361478.1
ENST00000374571.5
ENST00000374583.1
ENST00000477231.1
ENST00000590146.1