RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIWIL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000184571

Ensembl transcript IDs: ENST00000332271.9, ENST00000527701.5, ENST00000532537.2, ENST00000533313.5, ENST00000616349.4

Found 453 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTaGGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAACC +
Preference number: 1 (lower is better)
Translates to: EWPCLGWKMFSHVQL*DLCHIFERETASQT
Trigger: GGTTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR TCA 90 bp GAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTaGAAGGGAAACTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: ENVQSRSAVRSLSHI*KGNCKPNPVSSPLW
Trigger: CCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR GCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATaGCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGGTGGAA +
Preference number: 1 (lower is better)
Translates to: QVEFTCSQMYSLCDE*PIFSILRVALLGVE
Trigger: TTCCACCCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR-3UTR CCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTGGCCCTGCTTGGGGTaGAAAATGTTCAGTCACGTT +
Preference number: 2 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPWPCLG*KMFSHV
Trigger: AACGTGACTGAACATTTTCCACCCCAAGCAGGGCCA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR CAA 90 bp GGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTaGAAAGGGAAACTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: GKCSVTFSCEISVTY*KGKLQAKPCQFSSL
Trigger: CAGAGAGGAGAACTGACAGGGTTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATATTTCAGACATCCTaGTTCAAAAGGAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSIFQTS*FKRKTG
Trigger: GCCTGTCTTCCTTTTGAAGCAGGATGTCTGAAATAT...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
3UTR-3UTR GCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATATTTCAGACATCCTaGTTCAAAAGGAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPIFQTS*FKRKTG
Trigger: GCCTGTCTTCCTTTTGAAGCAGGATGTCTGAAATAT...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR-3UTR GCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCATATTTCAGACATCCTaGTTCAAAAGGAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: QVEFTCSQMYSLCDECPIIFQTS*FKRKTG
Trigger: GCCTGTCTTCCTTTTGAAGCAGGATGTCTGAAATAT...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR-3UTR CCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGTCAGTTCTCCTCTCTaGAAAAATCAGTCTGTGGTA +
Preference number: 2 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLVSSPL*KNQSVV
Trigger: TACCACAGACTGATTTTTCCAGAGAGGAGAACTGAC...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR-3UTR CAA 90 bp CTTAGAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGACAGTCTGTGGTAGTATaGAGAGTAGAACATATCACT +
Preference number: 3 (lower is better)
Translates to: LRVALLGVENVQSRSAVRQSVVV*RVEHIT
Trigger: AGTGATATGTTCTACTCTCAATACTACCACAGACTG...TCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR GCA 72 bp TTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATaGCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: FTCSQMYSLCDE*PIFSILRVALL
Trigger: AAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
3UTR-3UTR CAA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTATCTCTGTCACATATTaGAAAGGGAAACTGCAAGCC +
Preference number: 3 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFISVTY*KGKLQA
Trigger: GGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGAT...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTCCCTGCGGCGGGCTCTaGCTCGGGCGCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSPCGGL*LGRESL
Trigger: CAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGG...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCCCTGCGGCGGGCTCTaGCTCGGGCGCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQPCGGL*LGRESL
Trigger: CAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCCCCTGCGGCGGGCTCTaGCTCGGGCGCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QVEFTCSQMYSLCDECPIPCGGL*LGRESL
Trigger: CAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGG...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTGTTGGTAGCTCTCCCTaGGGCGGGCTCTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSVGSSP*GGLCLG
Trigger: CCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAAC...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCCCTGCGGCGGGCTCTaGCTCGGGCGCGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLPCGGL*LGRESL
Trigger: CAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGG...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTACTGGGACTTCCTCCTaGAGCGGCCGGGGTGTCGAC +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSTGTSS*SGRGVD
Trigger: GTCGACACCCCGGCCGCTGCAGGAGGAAGTCCCAGT...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCTGCAAGGGCGCTGTATaGAACCCAGCCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVCKGAV*NPASGP
Trigger: TGGACCTGAGGCTGGGTTGCATACAGCGCCCTTGCA...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CTTAGAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGACTGATCCAGGTGCTCTaGGTCCCCCAGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRVALLGVENVQSRSAVRLIQVL*VPQVPL
Trigger: AAGAGGCACCTGGGGGACCCAGAGCACCTGGATCAG...TCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGCTGATCCAGGTGCTCTaGGTCCCCCAGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLCDECPIFSILRVALLGLIQVL*VPQVPL
Trigger: AAGAGGCACCTGGGGGACCCAGAGCACCTGGATCAG...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCATAGTGGCAAGGCGCTaGAACTCGGATGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVIVARR*NSDDAW
Trigger: CCAGGCATCATCCGAGTTCCAGCGCCTTGCCACTAT...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTCGATTCGGTTCCTGGTaGATGGACTGCCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSRFGSW*MDCPTR
Trigger: CCTCGTGGGGCAGTCCATTCACCAGGAACCGAATCG...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTGTTGGTAGCTCTCCCTaGGGCGGGCTCTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFVGSSP*GGLCLG
Trigger: CCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAAC...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTCACCCCTTGAGACTGTaGTCCTCCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSHPLRL*SSSCSS
Trigger: GGAGGAGCAGGAGGAGGAGCACAGTCTCAAGGGGTG...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGTGCAAGGGCGCTGTATaGAACCCAGCCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLCDECPIFSILRVALLGCKGAV*NPASGP
Trigger: TGGACCTGAGGCTGGGTTGCATACAGCGCCCTTGCA...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CTTAGAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGACGGATGTTTCCTGTCTaGGCCTGGGCAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LRVALLGVENVQSRSAVRRMFPV*AWADVL
Trigger: GAGAACATCTGCCCAGGCCCAGACAGGAAACATCCG...TCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTGCTGGGCAATCTTGGTaGCGATGGTCCTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSAGQSW*RWSLPG
Trigger: TCCAGGCAAGGACCATCGTCACCAAGATTGCCCAGC...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGCGATTCGGTTCCTGGTaGATGGACTGCCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIERFGSW*MDCPTR
Trigger: CCTCGTGGGGCAGTCCATTCACCAGGAACCGAATCG...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGGCTCACTGTAGCTaGTCCAGGTGCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCRAHCS*SRCSGS
Trigger: GGACCCAGAGCACCTGGATCAGCTACAGTGAGCCCT...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR GCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCTCGGGCGCGAGTCCTTaGCCTACCAGGCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCSGASP*PTRHCG
Trigger: ACCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGA...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTCTGGGTCCCCCAGGTaGCTCTTGTTGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSSGSPR*LLLVAL
Trigger: GAGAGCTACCAACAAGAGGCACCTGGGGGACCCAGA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAAACTGGGACTTCCTCCTaGAGCGGCCGGGGTGTCGAC +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKTGTSS*SGRGVD
Trigger: GTCGACACCCCGGCCGCTGCAGGAGGAAGTCCCAGT...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCGACCCTTTAAGGACATaGCTTCTCTGTGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVDPLRT*LLCDCS
Trigger: GGAGCAGTCACAGAGAAGCCATGTCCTTAAAGGGTC...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTCTATGGATCTGTAGCTaGTCCAGGTGCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSLWICS*SRCSGS
Trigger: GGACCCAGAGCACCTGGATCAGCTACAGATCCATAG...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527701.5
CDS-3UTR GCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTTCGGGCGCGAGTCCTTaGCCTACCAGGCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSISGASP*PTRHCG
Trigger: ACCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGA...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGTTGGTAGCTCTCCCTaGGGCGGGCTCTGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTVGSSP*GGLCLG
Trigger: CCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAAC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCACCCCTTGAGACTGTaGTCCTCCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGHPLRL*SSSCSS
Trigger: GGAGGAGCAGGAGGAGGAGCACAGTCTCAAGGGGTG...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGTGCAAGGGCGCTGTATaGAACCCAGCCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIECKGAV*NPASGP
Trigger: TGGACCTGAGGCTGGGTTGCATACAGCGCCCTTGCA...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGCCAATCCTTCTCTCCTaGAAGGGCGCTGTATGCAAC +
Preference number: 4 (lower is better)
Translates to: SLCDECPIFSILRVALLGPILLS*KGAVCN
Trigger: GTTGCATACAGCGCCCTTGCAGGAGAGAAGGATTGG...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATGCTTCATATCTTaGCTGGTGTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVTCFIS*LVFTTR
Trigger: CCTGGTGGTGAACACCAGGCAAGATATGAAGCATGT...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACTGATCCAGGTGCTCTaGGTCCCCCAGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLALIQVL*VPQVPL
Trigger: AAGAGGCACCTGGGGGACCCAGAGCACCTGGATCAG...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGCAGAGGTCTAACCACTaGGACTTCCTCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEQRSNH*DFLLQR
Trigger: CCGCTGCAGGAGGAAGTCCCAGTGGTTAGACCTCTG...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCCACCACACACTGGCTTaGAATTGGGCATTTGGTACA +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVHHTLA*NWAFGT
Trigger: TGTACCAAATGCCCAATTCCAAGCCAGTGTGTGGTG...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATAGTGGCAAGGCGCTaGAACTCGGATGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSIVARR*NSDDAW
Trigger: CCAGGCATCATCCGAGTTCCAGCGCCTTGCCACTAT...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAATCGGGCGCGAGTCCTTaGCCTACCAGGCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKSGASP*PTRHCG
Trigger: ACCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGA...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTTCTGGGTCCCCCAGGTaGCTCTTGTTGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGSGSPR*LLLVAL
Trigger: GAGAGCTACCAACAAGAGGCACCTGGGGGACCCAGA...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTTCTGGGTCCCCCAGGTaGCTCTTGTTGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSISGSPR*LLLVAL
Trigger: GAGAGCTACCAACAAGAGGCACCTGGGGGACCCAGA...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACTGGGACTTCCTCCTaGAGCGGCCGGGGTGTCGAC +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWTGTSS*SGRGVD
Trigger: GTCGACACCCCGGCCGCTGCAGGAGGAAGTCCCAGT...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp AAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAAACTGGGACTTCCTCCTaGAGCGGCCGGGGTGTCGAC +
Preference number: 4 (lower is better)
Translates to: KCSVTFSCEISVTYLKGKTGTSS*SGRGVD
Trigger: GTCGACACCCCGGCCGCTGCAGGAGGAAGTCCCAGT...TTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGTGCTCCTCCTCTTGCTaGTCTTGGCTGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQCSSSC*SWLQRS
Trigger: AGACCTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCA...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATGCAAGGGCGCTGTATaGAACCCAGCCTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLACKGAV*NPASGP
Trigger: TGGACCTGAGGCTGGGTTGCATACAGCGCCCTTGCA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCATCTTGCAATTCATCTaGTGGGCAATCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVILQFI*WAILVT
Trigger: CGTCACCAAGATTGCCCAGCAGATGAATTGCAAGAT...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCGGATGTTTCCTGTCTaGGCCTGGGCAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQRMFPV*AWADVL
Trigger: GAGAACATCTGCCCAGGCCCAGACAGGAAACATCCG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGTCGGTTCCTGGTGAATaGACTGCCCCACGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIESVPGE*TAPRGK
Trigger: CTTACCTCGTGGGGCAGTCCATTCACCAGGAACCGA...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCTTTCAATTCTTAGAGTaGCCCTGCTTGGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVFQFLE*PCLGWK
Trigger: TTTCCACCCCAAGCAGGGCCACTCTAAGAATTGAAA...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTGGTTCCTTCACCCCTTaGGACTGTGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLGSFTP*DCAPPP
Trigger: AGGAGGAGGAGCACAGTCTCAAGGGGTGAAGGAACC...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCCTGGCGACGTGGGCGTaGGTTCTTTGGAAAACTCAA +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCLATWA*VLWKTQ
Trigger: TTGAGTTTTCCAAAGAACTCACGCCCACGTCGCCAG...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCTGGGTCCCCCAGGTaGCTCTTGTTGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFSGSPR*LLLVAL
Trigger: GAGAGCTACCAACAAGAGGCACCTGGGGGACCCAGA...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCTTGCTGCTCTTGGCTaGAGAGGTCTAACCACTGGG +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSILAALG*RGLTTG
Trigger: CCCAGTGGTTAGACCTCTGCAGCCAAGAGCAGCAAG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTGCTCCTCCTCTTGCTaGTCTTGGCTGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPCSSSC*SWLQRS
Trigger: AGACCTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTACACCCCTTGAGACTGTaGTCCTCCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLHPLRL*SSSCSS
Trigger: GGAGGAGCAGGAGGAGGAGCACAGTCTCAAGGGGTG...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCAGAGGTCTAACCACTaGGACTTCCTCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLQRSNH*DFLLQR
Trigger: CCGCTGCAGGAGGAAGTCCCAGTGGTTAGACCTCTG...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTCAGAGGTCTAACCACTaGGACTTCCTCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFQRSNH*DFLLQR
Trigger: CCGCTGCAGGAGGAAGTCCCAGTGGTTAGACCTCTG...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGTCACTCGGAAGTGGTTaGCGAGTAGCTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQSLGSG*RVAVPL
Trigger: CAGTGGTACAGCTACTCGCCAACCACTTCCGAGTGA...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTGATATCACTCGGAAGTaGTTGGCGAGTAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSDITRK*LASSCT
Trigger: GGTACAGCTACTCGCCAACCACTTCCGAGTGATATC...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCGGATGTTTCCTGTCTaGGCCTGGGCAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGRMFPV*AWADVL
Trigger: GAGAACATCTGCCCAGGCCCAGACAGGAAACATCCG...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTGGCCCTGCTTGGGGTaGAAAATGTTCAGTCACGTT +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSWPCLG*KMFSHV
Trigger: AACGTGACTGAACATTTTCCACCCCAAGCAGGGCCA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CTTAGAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATTTCAATTCTTAGAGTaGCCCTGCTTGGGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LRVALLGVENVQSRSAVRFQFLE*PCLGWK
Trigger: TTTCCACCCCAAGCAGGGCCACTCTAAGAATTGAAA...TCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCTGGAGGTTGTCAGATaGGGCCCCGCAGCGCCACTA +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWLEVVR*GPAAPL
Trigger: TAGTGGCGCTGCGGGGCCCCATCTGACAACCTCCAG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527701.5
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAAGTATATGGTCCCCCTaGAGGTTGTCAGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLASIWSP*RLSDGA
Trigger: GGCCCCATCTGACAACCTCCAGGGGGACCATATACT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527701.5
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCACCGCACTCTGGCCTaGGCAACAACGGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGHRTLA*ATTAKL
Trigger: AAGTTTTGCCGTTGTTGCCCAGGCCAGAGTGCGGTG...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR TCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCTCCTGGGTTGTAGCTaGTCCAGGTGCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWLLGCS*SRCSGS
Trigger: GGACCCAGAGCACCTGGATCAGCTACAACCCAGGAG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCTCCTGGGTTGTAGCTaGTCCAGGTGCTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTLLGCS*SRCSGS
Trigger: GGACCCAGAGCACCTGGATCAGCTACAACCCAGGAG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCGGATACAAATCACCTTaGAAACCAGCAAACATGACA +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVGYKSP*KPANMT
Trigger: TGTCATGTTTGCTGGTTTTCAAGGTGATTTGTATCC...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGCTGGGCAATCTTGGTaGCGATGGTCCTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLAGQSW*RWSLPG
Trigger: TCCAGGCAAGGACCATCGTCACCAAGATTGCCCAGC...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCGATTCGGTTCCTGGTaGATGGACTGCCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTRFGSW*MDCPTR
Trigger: CCTCGTGGGGCAGTCCATTCACCAGGAACCGAATCG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTCGGGCGCGAGTCCTTaGCCTACCAGGCATTGTGGT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTSGASP*PTRHCG
Trigger: ACCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAATGCTCCTCCTCTTGCTaGTCTTGGCTGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKCSSSC*SWLQRS
Trigger: AGACCTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCA...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAACACCCCTTGAGACTGTaGTCCTCCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDEHPLRL*SSSCSS
Trigger: GGAGGAGCAGGAGGAGGAGCACAGTCTCAAGGGGTG...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACCAATCCTTCTCTCCTaGAAGGGCGCTGTATGCAAC +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAPILLS*KGAVCN
Trigger: GTTGCATACAGCGCCCTTGCAGGAGAGAAGGATTGG...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCCAATCCTTCTCTCCTaGAAGGGCGCTGTATGCAAC +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGPILLS*KGAVCN
Trigger: GTTGCATACAGCGCCCTTGCAGGAGAGAAGGATTGG...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTTAGAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGACATCAGGTCTTCTTCTaGAGGTCAAAGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LRVALLGVENVQSRSAVRHQVFF*RSKVKE
Trigger: CTCTTTTACCTTTGACCTGCAGAAGAAGACCTGATG...TCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATCCTCTTGCTGCTCTTaGCTGCAGAGGTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLASSCCS*LQRSNH
Trigger: GTGGTTAGACCTCTGCAGCCAAGAGCAGCAAGAGGA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTTCCTCTTGCTGCTCTTaGCTGCAGAGGTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGSSCCS*LQRSNH
Trigger: GTGGTTAGACCTCTGCAGCCAAGAGCAGCAAGAGGA...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTCCTCTTGCTGCTCTTaGCTGCAGAGGTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPSSCCS*LQRSNH
Trigger: GTGGTTAGACCTCTGCAGCCAAGAGCAGCAAGAGGA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATCACTCGGAAGTGGTTaGCGAGTAGCTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLASLGSG*RVAVPL
Trigger: CAGTGGTACAGCTACTCGCCAACCACTTCCGAGTGA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTTCACTCGGAAGTGGTTaGCGAGTAGCTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSISLGSG*RVAVPL
Trigger: CAGTGGTACAGCTACTCGCCAACCACTTCCGAGTGA...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTATTCGGAGCAGTTTGTaGCTCACATCGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIIRSSL*LTSAQR
Trigger: CCTCTGTGCCGATGTGAGCCACAAACTGCTCCGAAT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTTTCCTGTCTGGGCCTaGGCAGATGTTCTCTTTATG +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSFPVWA*ADVLFM
Trigger: CATAAAGAGAACATCTGCCCAGGCCCAGACAGGAAA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCGACCCTTTAAGGACATaGCTTCTCTGTGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCDPLRT*LLCDCS
Trigger: GGAGCAGTCACAGAGAAGCCATGTCCTTAAAGGGTC...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGACGCTGTACTGTATCTaGGCTCAAGCCAATCGTGTC +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIETLYCI*AQANRV
Trigger: GACACGATTGGCTTGAGCCCAGATACAGTACAGCGT...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTATAGTGGCAAGGCGCTaGAACTCGGATGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFIVARR*NSDDAW
Trigger: CCAGGCATCATCCGAGTTCCAGCGCCTTGCCACTAT...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTATAGTGGCAAGGCGCTaGAACTCGGATGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLIVARR*NSDDAW
Trigger: CCAGGCATCATCCGAGTTCCAGCGCCTTGCCACTAT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGTCCTGGCTAACACAGTaGAACCCTATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SLCDECPIFSILRVALLGSWLTQ*NPISTK
Trigger: TTTAGTAGAGATAGGGTTTCACTGTGTTAGCCAGGA...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332271.9
CDS-3UTR TCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGTGACACTCTGTAGATaGCCCTTTAAGGACATGGCT +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQVTLCR*PFKDMA
Trigger: AGCCATGTCCTTAAAGGGTCATCTACAGAGTGTCAC...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGCTGGGCAATCTTGGTaGCGATGGTCCTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTAGQSW*RWSLPG
Trigger: TCCAGGCAAGGACCATCGTCACCAAGATTGCCCAGC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGGCTGGGCAATCTTGGTaGCGATGGTCCTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWAGQSW*RWSLPG
Trigger: TCCAGGCAAGGACCATCGTCACCAAGATTGCCCAGC...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCTTCTGGATGACACATTaGGAGTACCACTTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVFWMTH*EYHFVN
Trigger: ATTAACAAAGTGGTACTCTCAATGTGTCATCCAGAA...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTCAATCGTGTCATAGATaGCGTTATAATGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSQSCHR*RYNEWG
Trigger: CCCCCACTCATTATAACGTCATCTATGACACGATTG...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTGTAAAAGAGACGAGTTaGCAAGGAACGATTCGGTTC +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSVKETS*QGTIRF
Trigger: GAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTAC...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGGATGTACTCTCTCTGTaGCGAATGCCCCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEDVLSL*RMPHLF
Trigger: GAAAAGATGGGGCATTCGTCACAGAGAGAGTACATC...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTACTTGCTGCTCTTGGCTaGAGAGGTCTAACCACTGGG +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLLAALG*RGLTTG
Trigger: CCCAGTGGTTAGACCTCTGCAGCCAAGAGCAGCAAG...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTCCAATCCTTCTCTCCTaGAAGGGCGCTGTATGCAAC +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFPILLS*KGAVCN
Trigger: GTTGCATACAGCGCCCTTGCAGGAGAGAAGGATTGG...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTTCATGGTCAAGCAATaGTTGAAGCTGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSFMVKQ*LKLTIS
Trigger: GGAGATGGTCAGCTTCAAGCATTGCTTGACCATGAA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCAGAGGTCTAACCACTaGGACTTCCTCCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTQRSNH*DFLLQR
Trigger: CCGCTGCAGGAGGAAGTCCCAGTGGTTAGACCTCTG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGCTTCATATCTTGCCTaGTGTTCACCACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQASYLA*CSPPGL
Trigger: AAGACCTGGTGGTGAACACCAGGCAAGATATGAAGC...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAGATATCACTCGGAAGTaGTTGGCGAGTAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLADITRK*LASSCT
Trigger: GGTACAGCTACTCGCCAACCACTTCCGAGTGATATC...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGATATCACTCGGAAGTaGTTGGCGAGTAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIDITRK*LASSCT
Trigger: GGTACAGCTACTCGCCAACCACTTCCGAGTGATATC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCTCCATCTTCTATGTCTaGTTTGTAGTCAACGTTGTA +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVSIFYV*FVVNVV
Trigger: TACAACGTTGACTACAAACCAGACATAGAAGATGGA...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAAATTCGGAGCAGTTTGTaGCTCACATCGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKIRSSL*LTSAQR
Trigger: CCTCTGTGCCGATGTGAGCCACAAACTGCTCCGAAT...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTACGGATGTTTCCTGTCTaGGCCTGGGCAGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLRMFPV*AWADVL
Trigger: GAGAACATCTGCCCAGGCCCAGACAGGAAACATCCG...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAGACCCTTTAAGGACATaGCTTCTCTGTGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLADPLRT*LLCDCS
Trigger: GGAGCAGTCACAGAGAAGCCATGTCCTTAAAGGGTC...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCACCACACACTGGCTTaGAATTGGGCATTTGGTACA +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQHHTLA*NWAFGT
Trigger: TGTACCAAATGCCCAATTCCAAGCCAGTGTGTGGTG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGCACCACACACTGGCTTaGAATTGGGCATTTGGTACA +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEHHTLA*NWAFGT
Trigger: TGTACCAAATGCCCAATTCCAAGCCAGTGTGTGGTG...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTACGCTGTACTGTATCTaGGCTCAAGCCAATCGTGTC +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSITLYCI*AQANRV
Trigger: GACACGATTGGCTTGAGCCCAGATACAGTACAGCGT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTACGCTGTACTGTATCTaGGCTCAAGCCAATCGTGTC +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGTLYCI*AQANRV
Trigger: GACACGATTGGCTTGAGCCCAGATACAGTACAGCGT...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTATCGGTTCCTGGTGAATaGACTGCCCCACGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLSVPGE*TAPRGK
Trigger: CTTACCTCGTGGGGCAGTCCATTCACCAGGAACCGA...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTTAGAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATTCAAATCCCAGAGTTaGAGTAACTCTCGTACTTTT +
Preference number: 4 (lower is better)
Translates to: LRVALLGVENVQSRSAVRFKSQS*SNSRTF
Trigger: AAAAGTACGAGAGTTACTTCAACTCTGGGATTTGAA...TCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCTCCTGCTATAGAGTATaGGCCAACTATGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCSCYRV*ANYVVA
Trigger: TGCCACTACATAGTTGGCTCATACTCTATAGCAGGA...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCGTGACACTCTGTAGATaGCCCTTTAAGGACATGGCT +
Preference number: 4 (lower is better)
Translates to: QVEFTCSQMYSLCDECPIVTLCR*PFKDMA
Trigger: AGCCATGTCCTTAAAGGGTCATCTACAGAGTGTCAC...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCAATCGTGTCATAGATaGCGTTATAATGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQQSCHR*RYNEWG
Trigger: CCCCCACTCATTATAACGTCATCTATGACACGATTG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGTAAAAGAGACGAGTTaGCAAGGAACGATTCGGTTC +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQVKETS*QGTIRF
Trigger: GAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTAC...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCGTAAAAGAGACGAGTTaGCAAGGAACGATTCGGTTC +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCVKETS*QGTIRF
Trigger: GAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTAC...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCGATGTACTCTCTCTGTaGCGAATGCCCCATCTTTTC +
Preference number: 4 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPDVLSL*RMPHLF
Trigger: GAAAAGATGGGGCATTCGTCACAGAGAGAGTACATC...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCTTGCTGCTCTTGGCTaGAGAGGTCTAACCACTGGG +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWLAALG*RGLTTG
Trigger: CCCAGTGGTTAGACCTCTGCAGCCAAGAGCAGCAAG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTGCTCCTCCTCTTGCTaGTCTTGGCTGCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTCSSSC*SWLQRS
Trigger: AGACCTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCACATGCTTCATATCTTaGCTGGTGTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPTCFIS*LVFTTR
Trigger: CCTGGTGGTGAACACCAGGCAAGATATGAAGCATGT...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAACATGCTTCATATCTTaGCTGGTGTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLATCFIS*LVFTTR
Trigger: CCTGGTGGTGAACACCAGGCAAGATATGAAGCATGT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGAACGTTGTATTTATATaGAACCCACTGAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: SLCDECPIFSILRVALLGNVVFI*NPLRTR
Trigger: TCTCGTCCTCAGTGGGTTGCATATAAATACAACGTT...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGCATGACATTCCCATCTaGAGTGTTGGTCTAGTATAT +
Preference number: 4 (lower is better)
Translates to: SLCDECPIFSILRVALLGHDIPI*SVGLVY
Trigger: ATATACTAGACCAACACTGCAGATGGGAATGTCATG...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTACTGATCCAGGTGCTCTaGGTCCCCCAGGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLLIQVL*VPQVPL
Trigger: AAGAGGCACCTGGGGGACCCAGAGCACCTGGATCAG...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTATCCTCTTGCTGCTCTTaGCTGCAGAGGTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLSSCCS*LQRSNH
Trigger: GTGGTTAGACCTCTGCAGCCAAGAGCAGCAAGAGGA...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTGCTTCATATCTTGCCTaGTGTTCACCACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGASYLA*CSPPGL
Trigger: AAGACCTGGTGGTGAACACCAGGCAAGATATGAAGC...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGCTTCATATCTTGCCTaGTGTTCACCACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIASYLA*CSPPGL
Trigger: AAGACCTGGTGGTGAACACCAGGCAAGATATGAAGC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCTTTCCATCAAATATATaGCGCTCTCCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVFPSNI*RSPNFL
Trigger: AAGGAAATTTGGAGAGCGCCATATATTTGATGGAAA...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTTTTCCTGTCTGGGCCTaGGCAGATGTTCTCTTTATG +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIFPVWA*ADVLFM
Trigger: CATAAAGAGAACATCTGCCCAGGCCCAGACAGGAAA...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCTGGCTGACCAAAAGTaGCTGTTTCTTCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSILADQK*LFLHCD
Trigger: GTCACAGTGAAGAAACAGCCACTTTTGGTCAGCCAG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCACCACACACTGGCTTaGAATTGGGCATTTGGTACA +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIHHTLA*NWAFGT
Trigger: TGTACCAAATGCCCAATTCCAAGCCAGTGTGTGGTG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGTCGGTTCCTGGTGAATaGACTGCCCCACGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWSVPGE*TAPRGK
Trigger: CTTACCTCGTGGGGCAGTCCATTCACCAGGAACCGA...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
3UTR CAA 72 bp TCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTaGAAAGGGAAACTGCAAGCCAAACCCTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SVTFSCEISVTY*KGKLQAKPCQF
Trigger: GAACTGACAGGGTTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAGGTTCCTTCACCCCTTaGGACTGTGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLGSFTP*DCAPPP
Trigger: AGGAGGAGGAGCACAGTCTCAAGGGGTGAAGGAACC...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTTCACCACCAGGTCTTaGAAAACTCCACCAATCCTT +
Preference number: 4 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPFTTRS*KTPPIL
Trigger: AAGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTTTCACCACCAGGTCTTaGAAAACTCCACCAATCCTT +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGFTTRS*KTPPIL
Trigger: AAGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAA...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGTTATATGCAACCCACTaGGGACGAGATATCACTCGG +
Preference number: 4 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLLYATH*GRDITR
Trigger: CCGAGTGATATCTCGTCCTCAGTGGGTTGCATATAA...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCTGGCGACGTGGGCGTaGGTTCTTTGGAAAACTCAA +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTLATWA*VLWKTQ
Trigger: TTGAGTTTTCCAAAGAACTCACGCCCACGTCGCCAG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTCCTGCTATAGAGTATaGGCCAACTATGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPSCYRV*ANYVVA
Trigger: TGCCACTACATAGTTGGCTCATACTCTATAGCAGGA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTTCCTGCTATAGAGTATaGGCCAACTATGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSISCYRV*ANYVVA
Trigger: TGCCACTACATAGTTGGCTCATACTCTATAGCAGGA...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTGAAAACCAGCAAACATaGCATTCCCATCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGENQQT*HSHLQC
Trigger: ACACTGCAGATGGGAATGTCATGTTTGCTGGTTTTC...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCTCCTGTTTTCTGGATaGCACATTGAGAGTACCACT +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSILLFSG*HIESTT
Trigger: AGTGGTACTCTCAATGTGTCATCCAGAAAACAGGAG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTCCTGTTTTCTGGATaGCACATTGAGAGTACCACT +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGLLFSG*HIESTT
Trigger: AGTGGTACTCTCAATGTGTCATCCAGAAAACAGGAG...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTGCGCTGGAACTCGGATaGTGCCTGGCAAATTATAAT +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLALELG*CLANYN
Trigger: ATTATAATTTGCCAGGCATCATCCGAGTTCCAGCGC...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAAGCGCTGGAACTCGGATaGTGCCTGGCAAATTATAAT +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKALELG*CLANYN
Trigger: ATTATAATTTGCCAGGCATCATCCGAGTTCCAGCGC...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGTAAAAGAGACGAGTTaGCAAGGAACGATTCGGTTC +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIVKETS*QGTIRF
Trigger: GAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTAC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGAGTCACGTTCAGCTGTaGGATCTCTGTCACATATTT +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIESHVQL*DLCHIF
Trigger: AAATATGTGACAGAGATCTCACAGCTGAACGTGACT...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCGCCTTGCACGATGTTTaGGTTTTTCAAAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCALHDV*VFQNSS
Trigger: GGAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGC...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGCCTTGCACGATGTTTaGGTTTTTCAAAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQALHDV*VFQNSS
Trigger: GGAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGC...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTATCTTGCAATTCATCTaGTGGGCAATCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIILQFI*WAILVT
Trigger: CGTCACCAAGATTGCCCAGCAGATGAATTGCAAGAT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTATCTTGCAATTCATCTaGTGGGCAATCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGILQFI*WAILVT
Trigger: CGTCACCAAGATTGCCCAGCAGATGAATTGCAAGAT...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTTTCATGGTCAAGCAATaGTTGAAGCTGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIFMVKQ*LKLTIS
Trigger: GGAGATGGTCAGCTTCAAGCATTGCTTGACCATGAA...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCCATCAGGTCTTCTTCTaGAGGTCAAAGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCHQVFF*RSKVKE
Trigger: CTCTTTTACCTTTGACCTGCAGAAGAAGACCTGATG...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTCTCTCTGTGACGAATaGCCCATCTTTTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSSLCDE*PIFSIL
Trigger: AAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGTCTGGAAGGCATCGTaGTACTTCCATGCAGTATAT +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIVWKAS*YFHAVY
Trigger: ATATACTGCATGGAAGTAGCACGATGCCTTCCAGAC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527701.5
CDS-3UTR CCA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGGCTTCATATCTTGCCTaGTGTTCACCACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLASYLA*CSPPGL
Trigger: AAGACCTGGTGGTGAACACCAGGCAAGATATGAAGC...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGATATCACTCGGAAGTaGTTGGCGAGTAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLDITRK*LASSCT
Trigger: GGTACAGCTACTCGCCAACCACTTCCGAGTGATATC...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGATTCGGAGCAGTTTGTaGCTCACATCGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWIRSSL*LTSAQR
Trigger: CCTCTGTGCCGATGTGAGCCACAAACTGCTCCGAAT...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAAATTCGGAGCAGTTTGTaGCTCACATCGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDEIRSSL*LTSAQR
Trigger: CCTCTGTGCCGATGTGAGCCACAAACTGCTCCGAAT...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGTTTCCTGTCTGGGCCTaGGCAGATGTTCTCTTTATG +
Preference number: 4 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLFPVWA*ADVLFM
Trigger: CATAAAGAGAACATCTGCCCAGGCCCAGACAGGAAA...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCTGGCTGACCAAAAGTaGCTGTTTCTTCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLLADQK*LFLHCD
Trigger: GTCACAGTGAAGAAACAGCCACTTTTGGTCAGCCAG...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGACGATGGTCCTTGCCTaGACTTTTTCTAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIETMVLA*TFSKVF
Trigger: AAAGACCTTAGAAAAAGTCCAGGCAAGGACCATCGT...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGACGATGGTCCTTGCCTaGACTTTTTCTAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQTMVLA*TFSKVF
Trigger: AAAGACCTTAGAAAAAGTCCAGGCAAGGACCATCGT...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTTTGCAATTCATCTGCTaGGCAATCTTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGLQFIC*AILVTM
Trigger: CATCGTCACCAAGATTGCCCAGCAGATGAATTGCAA...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATTGCAATTCATCTGCTaGGCAATCTTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLALQFIC*AILVTM
Trigger: CATCGTCACCAAGATTGCCCAGCAGATGAATTGCAA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGGTCAGTTCTCCTCTCTaGAAAAATCAGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEVSSPL*KNQSVV
Trigger: TACCACAGACTGATTTTTCCAGAGAGGAGAACTGAC...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTTTCACCACCAGGTCTTaGAAAACTCCACCAATCCTT +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLFTTRS*KTPPIL
Trigger: AAGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAA...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTATTATATGCAACCCACTaGGGACGAGATATCACTCGG +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLLYATH*GRDITR
Trigger: CCGAGTGATATCTCGTCCTCAGTGGGTTGCATATAA...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTTCAAATCCCAGAGTTaGAGTAACTCTCGTACTTTT +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSFKSQS*SNSRTF
Trigger: AAAAGTACGAGAGTTACTTCAACTCTGGGATTTGAA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGTCCTGCTATAGAGTATaGGCCAACTATGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLSCYRV*ANYVVA
Trigger: TGCCACTACATAGTTGGCTCATACTCTATAGCAGGA...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGGGATACAAATCACCTTaGAAACCAGCAAACATGACA +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEGYKSP*KPANMT
Trigger: TGTCATGTTTGCTGGTTTTCAAGGTGATTTGTATCC...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAAGAATGTGGCATCGATaGTTCGTTTTTACACCAGAC +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLARMWHR*FVFTPD
Trigger: GTCTGGTGTAAAAACGAATCATCGATGCCACATTCT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGCGCTGGAACTCGGATaGTGCCTGGCAAATTATAAT +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLALELG*CLANYN
Trigger: ATTATAATTTGCCAGGCATCATCCGAGTTCCAGCGC...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGGGCAGAAGAATCGCTTaGATCCTGGAGAGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWGRRIA*ILEREV
Trigger: AACCTCTCTCTCCAGGATTCAAGCGATTCTTCTGCC...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR GCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAACGTTGTATTTATATaGAACCCACTGAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCNVVFI*NPLRTR
Trigger: TCTCGTCCTCAGTGGGTTGCATATAAATACAACGTT...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTTTTGTCTTTGGTTGTaGTCAACCATTCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPFCLWL*STIPLS
Trigger: GGAGAGTGGAATGGTTGAGCACAACCAAAGACAAAA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTGTGTCTTCAGGATTCTaGTTCCAATCAATATCATCT +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSVSSGF*FQSISS
Trigger: AGATGATATTGATTGGAAGCAGAATCCTGAAGACAC...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCTCTCTCTGTGACGAATaGCCCATCTTTTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCSLCDE*PIFSIL
Trigger: AAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGGCCACTTCCACAGATaGAAAAATAATTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQGHFHR*KNNSGQ
Trigger: TTGTCCTGAATTATTTTTCCATCTGTGGAAGTGGCC...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGCGATGTTTTTGTCTTTaGTTGTGCTCAACCATTCCA +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIERCFCL*LCSTIP
Trigger: TGGAATGGTTGAGCACAACCAAAGACAAAAACATCG...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGTACGTTTGTCATCATTaGGCAGGATACAAATCACCT +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQYVCHH*AGYKSP
Trigger: AGGTGATTTGTATCCTGCCCAATGATGACAAACGTA...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGTACGTTTGTCATCATTaGGCAGGATACAAATCACCT +
Preference number: 4 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEYVCHH*AGYKSP
Trigger: AGGTGATTTGTATCCTGCCCAATGATGACAAACGTA...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCACGATGGTCCTTGCCTaGACTTTTTCTAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QVEFTCSQMYSLCDECPITMVLA*TFSKVF
Trigger: AAAGACCTTAGAAAAAGTCCAGGCAAGGACCATCGT...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAATTGCAATTCATCTGCTaGGCAATCTTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKLQFIC*AILVTM
Trigger: CATCGTCACCAAGATTGCCCAGCAGATGAATTGCAA...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCCGATTTACGATATCGTaGAAACAATCAATGCCAACG +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCRFTIS*KQSMPT
Trigger: CGTTGGCATTGATTGTTTCCACGATATCGTAAATCG...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCACGCTGTACTGTATCTaGGCTCAAGCCAATCGTGTC +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTTLYCI*AQANRV
Trigger: GACACGATTGGCTTGAGCCCAGATACAGTACAGCGT...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATCGGTTCCTGGTGAATaGACTGCCCCACGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLSVPGE*TAPRGK
Trigger: CTTACCTCGTGGGGCAGTCCATTCACCAGGAACCGA...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCGTCAGTTCTCCTCTCTaGAAAAATCAGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: QVEFTCSQMYSLCDECPIVSSPL*KNQSVV
Trigger: TACCACAGACTGATTTTTCCAGAGAGGAGAACTGAC...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTGGCCCTGCTTGGGGTaGAAAATGTTCAGTCACGTT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTWPCLG*KMFSHV
Trigger: AACGTGACTGAACATTTTCCACCCCAAGCAGGGCCA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCTACGTTTGTCATCATTaGGCAGGATACAAATCACCA +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCYVCHH*AGYKSP
Trigger: TGGTGATTTGTATCCTGCCCAATGATGACAAACGTA...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527701.5
ENST00000533313.5
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTTATATGCAACCCACTaGGGACGAGATATCACTCGG +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTLYATH*GRDITR
Trigger: CCGAGTGATATCTCGTCCTCAGTGGGTTGCATATAA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGGTGACACTCTGTAGATaGCCCTTTAAGGACATGGCT +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWVTLCR*PFKDMA
Trigger: AGCCATGTCCTTAAAGGGTCATCTACAGAGTGTCAC...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAAGTGACACTCTGTAGATaGCCCTTTAAGGACATGGCT +
Preference number: 4 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDEVTLCR*PFKDMA
Trigger: AGCCATGTCCTTAAAGGGTCATCTACAGAGTGTCAC...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTAGAATGTGGCATCGATaGTTCGTTTTTACACCAGAC +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLRMWHR*FVFTPD
Trigger: GTCTGGTGTAAAAACGAATCATCGATGCCACATTCT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTAGAATGTGGCATCGATaGTTCGTTTTTACACCAGAC +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFRMWHR*FVFTPD
Trigger: GTCTGGTGTAAAAACGAATCATCGATGCCACATTCT...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTACAATCGTGTCATAGATaGCGTTATAATGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLQSCHR*RYNEWG
Trigger: CCCCCACTCATTATAACGTCATCTATGACACGATTG...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGCGCTGGAACTCGGATaGTGCCTGGCAAATTATAAT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTALELG*CLANYN
Trigger: ATTATAATTTGCCAGGCATCATCCGAGTTCCAGCGC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTAGTCACGTTCAGCTGTaGGATCTCTGTCACATATTT +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFSHVQL*DLCHIF
Trigger: AAATATGTGACAGAGATCTCACAGCTGAACGTGACT...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAACCTCCCAGTCCCCCTaGCTCTTTTGCCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLTSQSP*LFCLPN
Trigger: ATTTGGAAGGCAAAAGAGGCAGGGGGACTGGGAGGT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000332271.9
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACATGCTTCATATCTTaGCTGGTGTTCACCACCAGG +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWTCFIS*LVFTTR
Trigger: CCTGGTGGTGAACACCAGGCAAGATATGAAGCATGT...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCAACGTTGTATTTATATaGAACCCACTGAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: QVEFTCSQMYSLCDECPINVVFI*NPLRTR
Trigger: TCTCGTCCTCAGTGGGTTGCATATAAATACAACGTT...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCGTGTCTTCAGGATTCTaGTTCCAATCAATATCATCT +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCVSSGF*FQSISS
Trigger: AGATGATATTGATTGGAAGCAGAATCCTGAAGACAC...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGTGTCTTCAGGATTCTaGTTCCAATCAATATCATCT +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQVSSGF*FQSISS
Trigger: AGATGATATTGATTGGAAGCAGAATCCTGAAGACAC...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGGCCTTGCACGATGTTTaGGTTTTTCAAAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLALHDV*VFQNSS
Trigger: GGAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGC...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAATATTTCAGACATCCTaGTTCAAAAGGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAIFQTS*FKRKTG
Trigger: GCCTGTCTTCCTTTTGAAGCAGGATGTCTGAAATAT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCAGGCACATATCTCTTaGAGAAAGGAAACAACGTTA +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGQAHIS*RKETTL
Trigger: TAACGTTGTTTCCTTTCTGCAAGAGATATGTGCCTG...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAGGCCACTTCCACAGATaGAAAAATAATTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAGHFHR*KNNSGQ
Trigger: TTGTCCTGAATTATTTTTCCATCTGTGGAAGTGGCC...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
CDS-3UTR CCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTTTCCATCAAATATATaGCGCTCTCCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSFPSNI*RSPNFL
Trigger: AAGGAAATTTGGAGAGCGCCATATATTTGATGGAAA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACGATGTTTTTGTCTTTaGTTGTGCTCAACCATTCCA +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLARCFCL*LCSTIP
Trigger: TGGAATGGTTGAGCACAACCAAAGACAAAAACATCG...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCGATGTTTTTGTCTTTaGTTGTGCTCAACCATTCCA +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIRCFCL*LCSTIP
Trigger: TGGAATGGTTGAGCACAACCAAAGACAAAAACATCG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCGAATGGCCTTCTTTTTaGTATAATAGTTGCGACCAA +
Preference number: 4 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCEWPSF*YNSCDQ
Trigger: TTGGTCGCAACTATTATACCAAAAAGAAGGCCATTC...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATTTCCTGTCTGGGCCTaGGCAGATGTTCTCTTTATG +
Preference number: 4 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDEFPVWA*ADVLFM
Trigger: CATAAAGAGAACATCTGCCCAGGCCCAGACAGGAAA...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCTGGCTGACCAAAAGTaGCTGTTTCTTCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWLADQK*LFLHCD
Trigger: GTCACAGTGAAGAAACAGCCACTTTTGGTCAGCCAG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTTCAATCATTTCTGCTaGTTTCATAGTTATGCCCAT +
Preference number: 4 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSFNHFC*FHSYAH
Trigger: ATGGGCATAACTATGAAACCAGCAGAAATGATTGAA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAAACGATGGTCCTTGCCTaGACTTTTTCTAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKTMVLA*TFSKVF
Trigger: AAAGACCTTAGAAAAAGTCCAGGCAAGGACCATCGT...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAAGTCAGTTCTCCTCTCTaGAAAAATCAGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKVSSPL*KNQSVV
Trigger: TACCACAGACTGATTTTTCCAGAGAGGAGAACTGAC...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTTCACCACCAGGTCTTaGAAAACTCCACCAATCCTT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTFTTRS*KTPPIL
Trigger: AAGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTGATTTTGCTGCCATCTaGTTTGTTAAATGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGDFAAI*FVKCVF
Trigger: GAAGACACATTTAACAAATCAGATGGCAGCAAAATC...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTAGTAGTCTATATAGGTaGTTTTGCTGCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSISSLYR*FCCHLI
Trigger: AATCAGATGGCAGCAAAATCACCTATATAGACTACT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCAGTAGTCTATATAGGTaGTTTTGCTGCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: QVEFTCSQMYSLCDECPISSLYR*FCCHLI
Trigger: AATCAGATGGCAGCAAAATCACCTATATAGACTACT...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATTCAAATCCCAGAGTTaGAGTAACTCTCGTACTTTT +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAFKSQS*SNSRTF
Trigger: AAAAGTACGAGAGTTACTTCAACTCTGGGATTTGAA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAAGAAAACCAGCAAACATaGCATTCCCATCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDEENQQT*HSHLQC
Trigger: ACACTGCAGATGGGAATGTCATGTTTGCTGGTTTTC...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATTCTGGATGACACATTaGGAGTACCACTTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAFWMTH*EYHFVN
Trigger: ATTAACAAAGTGGTACTCTCAATGTGTCATCCAGAA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAACTCCTGTTTTCTGGATaGCACATTGAGAGTACCACT +
Preference number: 4 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDELLFSG*HIESTT
Trigger: AGTGGTACTCTCAATGTGTCATCCAGAAAACAGGAG...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCAATCGTGTCATAGATaGCGTTATAATGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWQSCHR*RYNEWG
Trigger: CCCCCACTCATTATAACGTCATCTATGACACGATTG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGATCTTGCAATTCATCTaGTGGGCAATCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWILQFI*WAILVT
Trigger: CGTCACCAAGATTGCCCAGCAGATGAATTGCAAGAT...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp AAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAATTCATGGTCAAGCAATaGTTGAAGCTGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: KCSVTFSCEISVTYLKGKFMVKQ*LKLTIS
Trigger: GGAGATGGTCAGCTTCAAGCATTGCTTGACCATGAA...TTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTACATCAGGTCTTCTTCTaGAGGTCAAAGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLHQVFF*RSKVKE
Trigger: CTCTTTTACCTTTGACCTGCAGAAGAAGACCTGATG...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTATATTTCAGACATCCTaGTTCAAAAGGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLIFQTS*FKRKTG
Trigger: GCCTGTCTTCCTTTTGAAGCAGGATGTCTGAAATAT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGGTGATGACCTTATCTaGTCACATATTTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIGDDLI*SHISLE
Trigger: TTCTAAGGAAATATGTGACCAGATAAGGTCATCACC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000527701.5
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTGGTGATGACCTTATCTaGTCACATATTTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGGDDLI*SHISLE
Trigger: TTCTAAGGAAATATGTGACCAGATAAGGTCATCACC...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000527701.5
CDS-3UTR CCA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTTCCATCTTCTATGTCTaGTTTGTAGTCAACGTTGTA +
Preference number: 4 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGSIFYV*FVVNVV
Trigger: TACAACGTTGACTACAAACCAGACATAGAAGATGGA...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTCGATGTTTTTGTCTTTaGTTGTGCTCAACCATTCCA +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFRCFCL*LCSTIP
Trigger: TGGAATGGTTGAGCACAACCAAAGACAAAAACATCG...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAATGGCCTTCTTTTTaGTATAATAGTTGCGACCAA +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIEWPSF*YNSCDQ
Trigger: TTGGTCGCAACTATTATACCAAAAAGAAGGCCATTC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGGACGGTATAACTGAATaGCCTTCTTTTTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQDGITE*PSFWYN
Trigger: ATTATACCAAAAAGAAGGCCATTCAGTTATACCGTC...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTTGCAATTCATCTGCTaGGCAATCTTGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTLQFIC*AILVTM
Trigger: CATCGTCACCAAGATTGCCCAGCAGATGAATTGCAA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCGATTTACGATATCGTaGAAACAATCAATGCCAACG +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLRFTIS*KQSMPT
Trigger: CGTTGGCATTGATTGTTTCCACGATATCGTAAATCG...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAAACTCGGATGATGCCTaGCAAATTATAATACATGTG +
Preference number: 4 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLANSDDA*QIIIHV
Trigger: CACATGTATTATAATTTGCCAGGCATCATCCGAGTT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTGATTTTGCTGCCATCTaGTTTGTTAAATGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLDFAAI*FVKCVF
Trigger: GAAGACACATTTAACAAATCAGATGGCAGCAAAATC...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGAGTAGTCTATATAGGTaGTTTTGCTGCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLSSLYR*FCCHLI
Trigger: AATCAGATGGCAGCAAAATCACCTATATAGACTACT...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTAGTAGTCTATATAGGTaGTTTTGCTGCCATCTGATT +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLSSLYR*FCCHLI
Trigger: AATCAGATGGCAGCAAAATCACCTATATAGACTACT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTTCAAATCCCAGAGTTaGAGTAACTCTCGTACTTTT +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFFKSQS*SNSRTF
Trigger: AAAAGTACGAGAGTTACTTCAACTCTGGGATTTGAA...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTTTCTGGATGACACATTaGGAGTACCACTTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLFWMTH*EYHFVN
Trigger: ATTAACAAAGTGGTACTCTCAATGTGTCATCCAGAA...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGTTTTGTCTTTGGTTGTaGTCAACCATTCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWFCLWL*STIPLS
Trigger: GGAGAGTGGAATGGTTGAGCACAACCAAAGACAAAA...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTTTTGTCTTTGGTTGTaGTCAACCATTCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTFCLWL*STIPLS
Trigger: GGAGAGTGGAATGGTTGAGCACAACCAAAGACAAAA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGCCTTGCACGATGTTTaGGTTTTTCAAAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTALHDV*VFQNSS
Trigger: GGAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCATCAGGTCTTCTTCTaGAGGTCAAAGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWHQVFF*RSKVKE
Trigger: CTCTTTTACCTTTGACCTGCAGAAGAAGACCTGATG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTATACAAATCACCATCTaGAGTGTTGGTCTAGTATAT +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIIQITI*SVGLVY
Trigger: ATATACTAGACCAACACTGCAGATGGTGATTTGTAT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527701.5
ENST00000533313.5
CDS-3UTR CCA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGGCCACTTCCACAGATaGAAAAATAATTCAGGACAA +
Preference number: 4 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLGHFHR*KNNSGQ
Trigger: TTGTCCTGAATTATTTTTCCATCTGTGGAAGTGGCC...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332271.9
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTTCCATCTTCTATGTCTaGTTTGTAGTCAACGTTGTA +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLSIFYV*FVVNVV
Trigger: TACAACGTTGACTACAAACCAGACATAGAAGATGGA...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTCCATCAAATATATaGCGCTCTCCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: QVEFTCSQMYSLCDECPIFPSNI*RSPNFL
Trigger: AAGGAAATTTGGAGAGCGCCATATATTTGATGGAAA...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTGAATGGCCTTCTTTTTaGTATAATAGTTGCGACCAA +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLEWPSF*YNSCDQ
Trigger: TTGGTCGCAACTATTATACCAAAAAGAAGGCCATTC...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGACGGTATAACTGAATaGCCTTCTTTTTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIDGITE*PSFWYN
Trigger: ATTATACCAAAAAGAAGGCCATTCAGTTATACCGTC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTAACTCGGATGATGCCTaGCAAATTATAATACATGTG +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLNSDDA*QIIIHV
Trigger: CACATGTATTATAATTTGCCAGGCATCATCCGAGTT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTAACTCGGATGATGCCTaGCAAATTATAATACATGTG +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFNSDDA*QIIIHV
Trigger: CACATGTATTATAATTTGCCAGGCATCATCCGAGTT...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGGTCAGTTCTCCTCTCTaGAAAAATCAGTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWVSSPL*KNQSVV
Trigger: TACCACAGACTGATTTTTCCAGAGAGGAGAACTGAC...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCGGCAAAACTTTATCTaGTCACATATTTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIRQNFI*SHISLE
Trigger: TTCTAAGGAAATATGTGACCAGATAAAGTTTTGCCG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGAACGTTGTATTTATATaGAACCCACTGAGGACGAGA +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWNVVFI*NPLRTR
Trigger: TCTCGTCCTCAGTGGGTTGCATATAAATACAACGTT...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCATGACATTCCCATCTaGAGTGTTGGTCTAGTATAT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTHDIPI*SVGLVY
Trigger: ATATACTAGACCAACACTGCAGATGGGAATGTCATG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR GCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATTCATGGTCAAGCAATaGTTGAAGCTGACCATCTCC +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLFMVKQ*LKLTIS
Trigger: GGAGATGGTCAGCTTCAAGCATTGCTTGACCATGAA...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTGACGGTATAACTGAATaGCCTTCTTTTTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLDGITE*PSFWYN
Trigger: ATTATACCAAAAAGAAGGCCATTCAGTTATACCGTC...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTGACGGTATAACTGAATaGCCTTCTTTTTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFDGITE*PSFWYN
Trigger: ATTATACCAAAAAGAAGGCCATTCAGTTATACCGTC...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTTTCAATCATTTCTGCTaGTTTCATAGTTATGCCCAT +
Preference number: 4 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLFNHFC*FHSYAH
Trigger: ATGGGCATAACTATGAAACCAGCAGAAATGATTGAA...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCGATTTACGATATCGTaGAAACAATCAATGCCAACG +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTRFTIS*KQSMPT
Trigger: CGTTGGCATTGATTGTTTCCACGATATCGTAAATCG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp AAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACGATTTACGATATCGTaGAAACAATCAATGCCAACG +
Preference number: 4 (lower is better)
Translates to: KCSVTFSCEISVTYLKGKRFTIS*KQSMPT
Trigger: CGTTGGCATTGATTGTTTCCACGATATCGTAAATCG...TTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTACGTTTGTCATCATTaGGCAGGATACAAATCACCA +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTYVCHH*AGYKSP
Trigger: TGGTGATTTGTATCCTGCCCAATGATGACAAACGTA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527701.5
ENST00000533313.5
CDS-3UTR TCA 90 bp AAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAAGATTTTGCTGCCATCTaGTTTGTTAAATGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KCSVTFSCEISVTYLKGKDFAAI*FVKCVF
Trigger: GAAGACACATTTAACAAATCAGATGGCAGCAAAATC...TTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTTCTGGATGACACATTaGGAGTACCACTTTGTTAAT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTFWMTH*EYHFVN
Trigger: ATTAACAAAGTGGTACTCTCAATGTGTCATCCAGAA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR TCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAAGAATGTGGCATCGATaGTTCGTTTTTACACCAGAC +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLRMWHR*FVFTPD
Trigger: GTCTGGTGTAAAAACGAATCATCGATGCCACATTCT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATTTTGTCTTTGGTTGTaGTCAACCATTCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLFCLWL*STIPLS
Trigger: GGAGAGTGGAATGGTTGAGCACAACCAAAGACAAAA...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGTGTCTTCAGGATTCTaGTTCCAATCAATATCATCT +
Preference number: 4 (lower is better)
Translates to: SESLLCPIKNDENLMLWTVSSGF*FQSISS
Trigger: AGATGATATTGATTGGAAGCAGAATCCTGAAGACAC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGTCCATCTTCTATGTCTaGTTTGTAGTCAACGTTGTA +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWSIFYV*FVVNVV
Trigger: TACAACGTTGACTACAAACCAGACATAGAAGATGGA...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR GCA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGATACAAATCACCATCTaGAGTGTTGGTCTAGTATAT +
Preference number: 4 (lower is better)
Translates to: HSESLLCPIKNDENLMLWIQITI*SVGLVY
Trigger: ATATACTAGACCAACACTGCAGATGGTGATTTGTAT...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527701.5
ENST00000533313.5
CDS-3UTR CCA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATTCAATCATTTCTGCTaGTTTCATAGTTATGCCCAT +
Preference number: 4 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDEFNHFC*FHSYAH
Trigger: ATGGGCATAACTATGAAACCAGCAGAAATGATTGAA...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR TCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAGATTTTGCTGCCATCTaGTTTGTTAAATGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLDFAAI*FVKCVF
Trigger: GAAGACACATTTAACAAATCAGATGGCAGCAAAATC...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CCA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATTCAATCATTTCTGCTaGTTTCATAGTTATGCCCAT +
Preference number: 4 (lower is better)
Translates to: YHSESLLCPIKNDENLMLFNHFC*FHSYAH
Trigger: ATGGGCATAACTATGAAACCAGCAGAAATGATTGAA...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS GCA 90 bp CAGGTGCTCTGGGTCCCCCAGGTGCCTCTTGTTGGTAGCTCTCCCTaGGGCGGGCTCTGCCTCGGGCGCGAGTCCTTGCCCTACCAGGCA +
Preference number: 5 (lower is better)
Translates to: QVLWVPQVPLVGSSP*GGLCLGRESLPYQA
Trigger: TGCCTGGTAGGGCAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAACAAGAGGCACCTGGGGGACCCAGAGCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS GCA 90 bp TTGGTAGCTCTCCCTGCGGCGGGCTCTGCCTCGGGCGCGAGTCCTTaGCCTACCAGGCATTGTGGTCCTGAAGGTGATGACCTTATCTGG +
Preference number: 5 (lower is better)
Translates to: LVALPAAGSASGASP*PTRHCGPEGDDLIW
Trigger: CCAGATAAGGTCATCACCTTCAGGACCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
CDS GCA 90 bp TTGGTAGCTCTCCCTGCGGCGGGCTCTGCCTCGGGCGCGAGTCCTTaGCCTACCAGGCATTGTGGTCCTGAAGGTGATGACCCTGTAATC +
Preference number: 5 (lower is better)
Translates to: LVALPAAGSASGASP*PTRHCGPEGDDPVI
Trigger: GATTACAGGGTCATCACCTTCAGGACCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS CCA 90 bp TCCTGCTCCTCCTCTTGCTGCTCTTGGCTGCAGAGGTCTAACCACTaGGACTTCCTCCTGCAGCGGCCGGGGTGTCGACTGCAACTGAGG +
Preference number: 5 (lower is better)
Translates to: SCSSSCCSWLQRSNH*DFLLQRPGCRLQLR
Trigger: CCTCAGTTGCAGTCGACACCCCGGCCGCTGCAGGAGGAAGTCCCAGTGGTTAGACCTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCAGGTTCCTTCACCCCTaGAGACTGTGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVRFLHP*RLCSSS
Trigger: GGAGGAGGAGCACAGTCTCAAGGGGTGAAGGAACCT...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGCTCGGGCGCGAGTCCTaGCCCTACCAGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIELGRES*PYQALW
Trigger: CCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGAG...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCATCTGCTGGGCAATCTaGGTGACGATGGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVICWAI*VTMVLA
Trigger: GGCAAGGACCATCGTCACCAAGATTGCCCAGCAGAT...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCTCGGGCGCGAGTCCTaGCCCTACCAGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSILGRES*PYQALW
Trigger: CCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGAG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS TCA 90 bp ATATCTCTTGCAGAAAGGAAACAACGTTACAGGGCTCACTGTAGCTaGTCCAGGTGCTCTGGGTCCCCCAGGTGCCTCTTGTTGGTAGCT +
Preference number: 5 (lower is better)
Translates to: ISLAERKQRYRAHCS*SRCSGSPRCLLLVA
Trigger: AGCTACCAACAAGAGGCACCTGGGGGACCCAGAGCACCTGGATCAGCTACAGTGAGCCCTGTAACGTTGTTTCCTTTCTGCAAGAGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR CAA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAACTCGGGCGCGAGTCCTaGCCCTACCAGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKLGRES*PYQALW
Trigger: CCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGAG...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCCCAGGTGCCTCTTGTaGGTAGCTCTCCCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLPRCLL*VALPAA
Trigger: CGCCGCAGGGAGAGCTACCAACAAGAGGCACCTGGG...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCCTCCTGCTCCTCCTCTaGCTGCTCTTGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCLLLLL*LLLAAE
Trigger: CTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCAGGAG...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGCTCCTGCTCCTCCTCTaGCTGCTCTTGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIELLLLL*LLLAAE
Trigger: CTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCAGGAG...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS TCA 90 bp GCACATCAGGTCTTCTTCTGCAGGTCAAAGGTAAAAGAGACGAGTTaGCAAGGAACGATTCGGTTCCTGGTGAATGGACTGCCCCACGAG +
Preference number: 5 (lower is better)
Translates to: AHQVFFCRSKVKETS*QGTIRFLVNGLPHE
Trigger: CTCGTGGGGCAGTCCATTCACCAGGAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTACCTTTGACCTGCAGAAGAAGACCTGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCCTCCTGCTCCTCCTCTaGCTGCTCTTGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: QVEFTCSQMYSLCDECPILLLLL*LLLAAE
Trigger: CTCTGCAGCCAAGAGCAGCAAGAGGAGGAGCAGGAG...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCGTTCACCACCAGGTCTaGAAAAACTCCACCAATCCT +
Preference number: 5 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVVHHQV*KNSTNP
Trigger: AGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAAC...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp AAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTCGGGCGCGAGTCCTaGCCCTACCAGGCATTGTGG +
Preference number: 5 (lower is better)
Translates to: KCSVTFSCEISVTYLKGKLGRES*PYQALW
Trigger: CCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGAG...TTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTAGGTTCCTTCACCCCTaGAGACTGTGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGRFLHP*RLCSSS
Trigger: GGAGGAGGAGCACAGTCTCAAGGGGTGAAGGAACCT...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATCACTCGGAAGTGGTaGGCGAGTAGCTGTACCACT +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSITRKW*ASSCTT
Trigger: AGTGGTACAGCTACTCGCCAACCACTTCCGAGTGAT...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTCTATTCGGAGCAGTTaGTGGCTCACATCGGCACAG +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSSIRSS*WLTSAQ
Trigger: CTGTGCCGATGTGAGCCACAAACTGCTCCGAATAGA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGATGGTCAAGCAATGCTaGAAGCTGACCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SLCDECPIFSILRVALLGMVKQC*KLTISH
Trigger: GTGGGAGATGGTCAGCTTCAAGCATTGCTTGACCAT...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCGGTAAAAGAGACGAGTaGACAAGGAACGATTCGGTT +
Preference number: 5 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVGKRDE*TRNDSV
Trigger: AACCGAATCGTTCCTTGTCAACTCGTCTCTTTTACC...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGTCTATTCGGAGCAGTTaGTGGCTCACATCGGCACAG +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQSIRSS*WLTSAQ
Trigger: CTGTGCCGATGTGAGCCACAAACTGCTCCGAATAGA...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCTCTATTCGGAGCAGTTaGTGGCTCACATCGGCACAG +
Preference number: 5 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCSIRSS*WLTSAQ
Trigger: CTGTGCCGATGTGAGCCACAAACTGCTCCGAATAGA...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCCAGTCTCCTTGTGAATaGGCTTTAACCATTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVQSPCE*ALTILL
Trigger: CAGAAGAATGGTTAAAGCCAATTCACAAGGAGACTG...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCCAATGCCAACGAACATaGTTCTTTGTACGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVQCQRT*FFVRLS
Trigger: AGACAGACGTACAAAGAACAATGTTCGTTGGCATTG...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGGGTAACAGTCCCATCTaGCACAGACTGACTCACAAT +
Preference number: 5 (lower is better)
Translates to: SLCDECPIFSILRVALLGGNSPI*HRLTHN
Trigger: ATTGTGAGTCAGTCTGTGCAAGATGGGACTGTTACC...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTATCACTCGGAAGTGGTaGGCGAGTAGCTGTACCACT +
Preference number: 5 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGITRKW*ASSCTT
Trigger: AGTGGTACAGCTACTCGCCAACCACTTCCGAGTGAT...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTATCACTCGGAAGTGGTaGGCGAGTAGCTGTACCACT +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIITRKW*ASSCTT
Trigger: AGTGGTACAGCTACTCGCCAACCACTTCCGAGTGAT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTCTATTCGGAGCAGTTaGTGGCTCACATCGGCACAG +
Preference number: 5 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPSIRSS*WLTSAQ
Trigger: CTGTGCCGATGTGAGCCACAAACTGCTCCGAATAGA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTATCTGCTGGGCAATCTaGGTGACGATGGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLICWAI*VTMVLA
Trigger: GGCAAGGACCATCGTCACCAAGATTGCCCAGCAGAT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGATCTGCTGGGCAATCTaGGTGACGATGGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLICWAI*VTMVLA
Trigger: GGCAAGGACCATCGTCACCAAGATTGCCCAGCAGAT...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGATGGTCAAGCAATGCTaGAAGCTGACCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQMVKQC*KLTISH
Trigger: GTGGGAGATGGTCAGCTTCAAGCATTGCTTGACCAT...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGATGGTCAAGCAATGCTaGAAGCTGACCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEMVKQC*KLTISH
Trigger: GTGGGAGATGGTCAGCTTCAAGCATTGCTTGACCAT...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTGGTAACAGTCCCATCTaGCACAGACTGACTCACAAT +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSGNSPI*HRLTHN
Trigger: ATTGTGAGTCAGTCTGTGCAAGATGGGACTGTTACC...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCCAGTCTGTGGTAGTATaGAGAGTAGAACATATCACT +
Preference number: 5 (lower is better)
Translates to: GPAWGGKCSVTFSCEISVQSVVV*RVEHIT
Trigger: AGTGATATGTTCTACTCTCAATACTACCACAGACTG...GACAGAGATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGTTAGAGTGGCCCTGCTaGGGGTGGAAAATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQLEWPC*GWKMFS
Trigger: ACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAA...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS TCA 90 bp CCTCTCGGATGTTTCCTGTCTGGGCCTGGGCAGATGTTCTCTTTATaGAATCATAAGCAGTTTCTATTCGGAGCAGTTTGTGGCTCACAT +
Preference number: 5 (lower is better)
Translates to: PLGCFLSGPGQMFSL*NHKQFLFGAVCGSH
Trigger: ATGTGAGCCACAAACTGCTCCGAATAGAAACTGCTTATGATTTCATAAAGAGAACATCTGCCCAGGCCCAGACAGGAAACATCCGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CCA 90 bp ATTTATATGCAACCCACTGAGGACGAGATATCACTCGGAAGTGGTTaGCGAGTAGCTGTACCACTGTACCCTCTGAACCTGTTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: IYMQPTEDEISLGSG*RVAVPLYPLNLFLS
Trigger: ACTCAAAAACAGGTTCAGAGGGTACAGTGGTACAGCTACTCGCCAACCACTTCCGAGTGATATCTCGTCCTCAGTGGGTTGCATATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCAGGTTCCTTCACCCCTaGAGACTGTGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTRFLHP*RLCSSS
Trigger: GGAGGAGGAGCACAGTCTCAAGGGGTGAAGGAACCT...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGAGTGGCCCTGCTTGGGTGCCTTGCACGATGTTaGCGTTTTTCAAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: SLCDECPIFSILRVALLGCLARC*RFSKLF
Trigger: GAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGCA...CCCAAGCAGGGCCACTCTAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTCTACGTTTGTCATCATaGGGCAGGATACAAATCACC +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSLRLSS*GRIQIT
Trigger: GGTGATTTGTATCCTGCCCAATGATGACAAACGTAG...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCACACTGGCTTGGAATaGGGCATTTGGTACATAGGT +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQHTGLE*GIWYIG
Trigger: ACCTATGTACCAAATGCCCAATTCCAAGCCAGTGTG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS TCA 90 bp ATCTCCCACTCCATCCCGATACACAATAACAGAATGTGGCATCGATaGTTCGTTTTTACACCAGACATCCAGGGCAGCTTTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: ISHSIPIHNNRMWHR*FVFTPDIQGSFQAD
Trigger: ATCTGCTTGAAAGCTGCCCTGGATGTCTGGTGTAAAAACGAATCATCGATGCCACATTCTGTTATTGTGTATCGGGATGGAGTGGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAGTTCACCACCAGGTCTaGAAAAACTCCACCAATCCT +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAVHHQV*KNSTNP
Trigger: AGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAAC...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGTTCACCACCAGGTCTaGAAAAACTCCACCAATCCT +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIVHHQV*KNSTNP
Trigger: AGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAAC...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAATCACTCGGAAGTGGTaGGCGAGTAGCTGTACCACT +
Preference number: 5 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLITRKW*ASSCTT
Trigger: AGTGGTACAGCTACTCGCCAACCACTTCCGAGTGAT...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTGTTTTTGTCTTTGGTaGTGCTCAACCATTCCACTC +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSCFCLW*CSTIPL
Trigger: GAGTGGAATGGTTGAGCACAACCAAAGACAAAAACA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTACGATGTTTTTGTCTTaGGTTGTGCTCAACCATTCC +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSTMFLS*VVLNHS
Trigger: GGAATGGTTGAGCACAACCAAAGACAAAAACATCGT...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTTAGAGTGGCCCTGCTTGGGGTGGAAAATGTTCAGTCACGTTCAGCTGTGAGATATGATGCCTTCTTCTaGGACTCAATCTTGTATGTT +
Preference number: 5 (lower is better)
Translates to: LRVALLGVENVQSRSAVRYDAFF*DSILYV
Trigger: AACATACAAGATTGAGTCCAAGAAGAAGGCATCATA...TCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCACACTGGCTTGGAATaGGGCATTTGGTACATAGGT +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIHTGLE*GIWYIG
Trigger: ACCTATGTACCAAATGCCCAATTCCAAGCCAGTGTG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTCAATGCCAACGAACATaGTTCTTTGTACGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSQCQRT*FFVRLS
Trigger: AGACAGACGTACAAAGAACAATGTTCGTTGGCATTG...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTATGGTCAAGCAATGCTaGAAGCTGACCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLMVKQC*KLTISH
Trigger: GTGGGAGATGGTCAGCTTCAAGCATTGCTTGACCAT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGGGTAAAAGAGACGAGTaGACAAGGAACGATTCGGTT +
Preference number: 5 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEGKRDE*TRNDSV
Trigger: AACCGAATCGTTCCTTGTCAACTCGTCTCTTTTACC...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAAGGTTCCTTCACCCCTaGAGACTGTGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLRFLHP*RLCSSS
Trigger: GGAGGAGGAGCACAGTCTCAAGGGGTGAAGGAACCT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGATAGTTGCGACCAACTaGTTCAAAATCCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: AKPCQFSSLEKSVCGSIEIVATN*FKIQQL
Trigger: AAGCTGCTGGATTTTGAACAAGTTGGTCGCAACTAT...CTCAATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTACGTTTGTCATCATaGGGCAGGATACAAATCACC +
Preference number: 5 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGLRLSS*GRIQIT
Trigger: GGTGATTTGTATCCTGCCCAATGATGACAAACGTAG...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTTCCTGGAGGTGGATTTaGAAAATTGCTTCCATGTTT +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSSWRWI*KIASMF
Trigger: AAACATGGAAGCAATTTTCAAAATCCACCTCCAGGA...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTGGTAACAGTCCCATCTaGCACAGACTGACTCACAAT +
Preference number: 5 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFGNSPI*HRLTHN
Trigger: ATTGTGAGTCAGTCTGTGCAAGATGGGACTGTTACC...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS GCA 90 bp ATTTCCATCTTCTATGTCTGGTTTGTAGTCAACGTTGTATTTATATaGAACCCACTGAGGACGAGATATCACTCGGAAGTGGTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: ISIFYVWFVVNVVFI*NPLRTRYHSEVVGE
Trigger: CTCGCCAACCACTTCCGAGTGATATCTCGTCCTCAGTGGGTTGCATATAAATACAACGTTGACTACAAACCAGACATAGAAGATGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTGTTTTTGTCTTTGGTaGTGCTCAACCATTCCACTC +
Preference number: 5 (lower is better)
Translates to: QVEFTCSQMYSLCDECPICFCLW*CSTIPL
Trigger: GAGTGGAATGGTTGAGCACAACCAAAGACAAAAACA...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTACGATGTTTTTGTCTTaGGTTGTGCTCAACCATTCC +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSITMFLS*VVLNHS
Trigger: GGAATGGTTGAGCACAACCAAAGACAAAAACATCGT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATAGTTGCGACCAACTaGTTCAAAATCCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPIVATN*FKIQQL
Trigger: AAGCTGCTGGATTTTGAACAAGTTGGTCGCAACTAT...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCTTGCTGCCATCTGATTaGTTAAATGTGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCLLPSD*LNVSSG
Trigger: TCCTGAAGACACATTTAACAAATCAGATGGCAGCAA...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTTGCCTTGCACGATGTTaGCGTTTTTCAAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: LLQKEDRLTRCGFISTSGCLARC*RFSKLF
Trigger: GAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGCA...ACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTTGCCTTGCACGATGTTaGCGTTTTTCAAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSICLARC*RFSKLF
Trigger: GAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGCA...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCAGTCTCCTTGTGAATaGGCTTTAACCATTCTTCTG +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIQSPCE*ALTILL
Trigger: CAGAAGAATGGTTAAAGCCAATTCACAAGGAGACTG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCTCTTATTTCTCTaGACCAGTCTCCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSILLFL*TSLLVN
Trigger: ATTCACAAGGAGACTGGTCAAGAGAAATAAGAGAAT...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACTGTCATATCTACGTTaGTCATCATTGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLALSYLR*SSLGRI
Trigger: TATCCTGCCCAATGATGACAAACGTAGATATGACAG...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAATCTGCTGGGCAATCTaGGTGACGATGGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLICWAI*VTMVLA
Trigger: GGCAAGGACCATCGTCACCAAGATTGCCCAGCAGAT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCCAATGCCAACGAACATaGTTCTTTGTACGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: QVEFTCSQMYSLCDECPIQCQRT*FFVRLS
Trigger: AGACAGACGTACAAAGAACAATGTTCGTTGGCATTG...GATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCAATGCCAACGAACATaGTTCTTTGTACGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIQCQRT*FFVRLS
Trigger: AGACAGACGTACAAAGAACAATGTTCGTTGGCATTG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTGCAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTGAGAGTACCACTTaGTTAATTCAGCATTGGTAC +
Preference number: 5 (lower is better)
Translates to: LQAKPCQFSSLEKSVCGSIESTT*LIQHWY
Trigger: GTACCAATGCTGAATTAACAAAGTGGTACTCTCAAT...ACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGTCCTGGAGGTGGATTTaGAAAATTGCTTCCATGTTT +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQSWRWI*KIASMF
Trigger: AAACATGGAAGCAATTTTCAAAATCCACCTCCAGGA...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCAGTCTGTGGTAGTATaGAGAGTAGAACATATCACT +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQQSVVV*RVEHIT
Trigger: AGTGATATGTTCTACTCTCAATACTACCACAGACTG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAATCTCTGTCACATATTaGAAAGGGAAACTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAISVTY*KGKLQA
Trigger: GGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGAT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTTAGAGTGGCCCTGCTaGGGGTGGAAAATGTTCAGT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTLEWPC*GWKMFS
Trigger: ACTGAACATTTTCCACCCCAAGCAGGGCCACTCTAA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGTTCACCACCAGGTCTaGAAAAACTCCACCAATCCT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTVHHQV*KNSTNP
Trigger: AGGATTGGTGGAGTTTTTCAAGACCTGGTGGTGAAC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTTGTTTTTGTCTTTGGTaGTGCTCAACCATTCCACTC +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLCFCLW*CSTIPL
Trigger: GAGTGGAATGGTTGAGCACAACCAAAGACAAAAACA...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTATCTTCACGATGTTTTaGTCTTTGGTTGTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIIFTMF*SLVVLN
Trigger: GTTGAGCACAACCAAAGACAAAAACATCGTGAAGAT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAATCTTCACGATGTTTTaGTCTTTGGTTGTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAIFTMF*SLVVLN
Trigger: GTTGAGCACAACCAAAGACAAAAACATCGTGAAGAT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTATAGTTGCGACCAACTaGTTCAAAATCCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLIVATN*FKIQQL
Trigger: AAGCTGCTGGATTTTGAACAAGTTGGTCGCAACTAT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCTTGCTGCCATCTGATTaGTTAAATGTGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FQVEFTCSQMYSLCDECPLLPSD*LNVSSG
Trigger: TCCTGAAGACACATTTAACAAATCAGATGGCAGCAA...GGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCTATGATGCCTTCTTCTaGGACTCAATCTTGTATGTT +
Preference number: 5 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCYDAFF*DSILYV
Trigger: AACATACAAGATTGAGTCCAAGAAGAAGGCATCATA...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGAACCATTCTTCTGCCTaGCACGATGTTTGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: CSVTFSCEISVTYLKGKLNHSSA*HDVCVF
Trigger: AAAAACGCAAACATCGTGCAAGGCAGAAGAATGGTT...CAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAACTGTCATATCTACGTTaGTCATCATTGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKLSYLR*SSLGRI
Trigger: TATCCTGCCCAATGATGACAAACGTAGATATGACAG...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCTTGGAATTGGGCATTaGGTACATAGGTATCTTTTT +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQLGIGH*VHRYLF
Trigger: AAAAAGATACCTATGTACCAAATGCCCAATTCCAAG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCACACTGGCTTGGAATaGGGCATTTGGTACATAGGT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTHTGLE*GIWYIG
Trigger: ACCTATGTACCAAATGCCCAATTCCAAGCCAGTGTG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCAGCAACAAATCCTGCTATaGATTTCTGTCGATTTACGA +
Preference number: 5 (lower is better)
Translates to: EDRLTRCGFISTSGLLLQQQILL*ISVDLR
Trigger: TCGTAAATCGACAGAAATCAATAGCAGGATTTGTTG...CTGCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp AGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCTGCCAACAAATCCTGCTATaGATTTCTGTCGATTTACGA +
Preference number: 5 (lower is better)
Translates to: RKTGLHVVVSLAHQVFFCQQILL*ISVDLR
Trigger: TCGTAAATCGACAGAAATCAATAGCAGGATTTGTTG...GCAGAAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATCCTGGAGGTGGATTTaGAAAATTGCTTCCATGTTT +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLASWRWI*KIASMF
Trigger: AAACATGGAAGCAATTTTCAAAATCCACCTCCAGGA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGGTAACAGTCCCATCTaGCACAGACTGACTCACAAT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTGNSPI*HRLTHN
Trigger: ATTGTGAGTCAGTCTGTGCAAGATGGGACTGTTACC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAGGTAAAAGAGACGAGTaGACAAGGAACGATTCGGTT +
Preference number: 5 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLGKRDE*TRNDSV
Trigger: AACCGAATCGTTCCTTGTCAACTCGTCTCTTTTACC...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCAGTCTGTGGTAGTATaGAGAGTAGAACATATCACT +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIQSVVV*RVEHIT
Trigger: AGTGATATGTTCTACTCTCAATACTACCACAGACTG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS GCA 90 bp CTGCTATTGATTTCTGTCGATTTACGATATCGTGGAAACAATCAATaGCAACGAACATTGTTCTTTGTACGTCTGTCTCCACCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LLLISVDLRYRGNNQ*QRTLFFVRLSPPSR
Trigger: TCTGGAAGGTGGAGACAGACGTACAAAGAACAATGTTCGTTGGCATTGATTGTTTCCACGATATCGTAAATCGACAGAAATCAATAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTAACGATGTTTTTGTCTTaGGTTGTGCTCAACCATTCC +
Preference number: 5 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLTMFLS*VVLNHS
Trigger: GGAATGGTTGAGCACAACCAAAGACAAAAACATCGT...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATCAAAATCCAGCAGCTaGAAAGTTCTTCTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLASKSSS*KVLLKR
Trigger: TCTCTTTAGAAGAACTTTCAAGCTGCTGGATTTTGA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCATATGATGCCTTCTTCTaGGACTCAATCTTGTATGTT +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAYDAFF*DSILYV
Trigger: AACATACAAGATTGAGTCCAAGAAGAAGGCATCATA...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAATTCTCTTATTTCTCTaGACCAGTCTCCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAILLFL*TSLLVN
Trigger: ATTCACAAGGAGACTGGTCAAGAGAAATAAGAGAAT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAACTACGTTTGTCATCATaGGGCAGGATACAAATCACC +
Preference number: 5 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDELRLSS*GRIQIT
Trigger: GGTGATTTGTATCCTGCCCAATGATGACAAACGTAG...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCTACGTTTGTCATCATaGGGCAGGATACAAATCACC +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTLRLSS*GRIQIT
Trigger: GGTGATTTGTATCCTGCCCAATGATGACAAACGTAG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTCTTGGAATTGGGCATTaGGTACATAGGTATCTTTTT +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSILGIGH*VHRYLF
Trigger: AAAAAGATACCTATGTACCAAATGCCCAATTCCAAG...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAGACATCCTGCTTCAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCAATTGAGAGTACCACTTaGTTAATTCAGCATTGGTAC +
Preference number: 5 (lower is better)
Translates to: QTSCFKRKTGLHVVVSLAIESTT*LIQHWY
Trigger: GTACCAATGCTGAATTAACAAAGTGGTACTCTCAAT...TGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTGAAGCAGGATGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAGCCAAACCCTGTCAGTTCTCCTCTCTGGAAAAATCAGTCTGTGGTAGTATTATTGAGAGTACCACTTaGTTAATTCAGCATTGGTAC +
Preference number: 5 (lower is better)
Translates to: QAKPCQFSSLEKSVCGSIIESTT*LIQHWY
Trigger: GTACCAATGCTGAATTAACAAAGTGGTACTCTCAAT...AATACTACCACAGACTGATTTTTCCAGAGAGGAGAACTGACAGGGTTTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAACAGTCTGTGGTAGTATaGAGAGTAGAACATATCACT +
Preference number: 5 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKQSVVV*RVEHIT
Trigger: AGTGATATGTTCTACTCTCAATACTACCACAGACTG...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAAGGCAGAAGAATCGCTaGAATCCTGGAGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLRQKNR*NPGERG
Trigger: ACCTCTCTCTCCAGGATTCAAGCGATTCTTCTGCCT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCACGATGTTTTTGTCTTaGGTTGTGCTCAACCATTCC +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTTMFLS*VVLNHS
Trigger: GGAATGGTTGAGCACAACCAAAGACAAAAACATCGT...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTTCAAAATCCAGCAGCTaGAAAGTTCTTCTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLSKSSS*KVLLKR
Trigger: TCTCTTTAGAAGAACTTTCAAGCTGCTGGATTTTGA...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAAAATCCAGCAGCTaGAAAGTTCTTCTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFSKSSS*KVLLKR
Trigger: TCTCTTTAGAAGAACTTTCAAGCTGCTGGATTTTGA...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTGACAATTTCTTTATGTaGCTGCCTGTAGTAGTCTAT +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLDNFFM*LPVVVY
Trigger: ATAGACTACTACAGGCAGCAACATAAAGAAATTGTC...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp GTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTGACAATTTCTTTATGTaGCTGCCTGTAGTAGTCTAT +
Preference number: 5 (lower is better)
Translates to: VEFTCSQMYSLCDECPIFDNFFM*LPVVVY
Trigger: ATAGACTACTACAGGCAGCAACATAAAGAAATTGTC...AAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGTGCCTTGCACGATGTTaGCGTTTTTCAAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: HSESLLCPIKNDENLMLWCLARC*RFSKLF
Trigger: GAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGCA...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGAACCATTCTTCTGCCTaGCACGATGTTTGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: HSESLLCPIKNDENLMLWNHSSA*HDVCVF
Trigger: AAAAACGCAAACATCGTGCAAGGCAGAAGAATGGTT...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCAGTCTCCTTGTGAATaGGCTTTAACCATTCTTCTG +
Preference number: 5 (lower is better)
Translates to: HSESLLCPIKNDENLMLWQSPCE*ALTILL
Trigger: CAGAAGAATGGTTAAAGCCAATTCACAAGGAGACTG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTATTCTCTTATTTCTCTaGACCAGTCTCCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLILLFL*TSLLVN
Trigger: ATTCACAAGGAGACTGGTCAAGAGAAATAAGAGAAT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp ACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAACTGCAAGCCAAAATTCTCTTATTTCTCTaGACCAGTCTCCTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: TFSCEISVTYLKGKLQAKILLFL*TSLLVN
Trigger: ATTCACAAGGAGACTGGTCAAGAGAAATAAGAGAAT...TTTGGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp GTAGTTTTCCAAGTAGAGTTTACTTGTTCACAGATGTACTCTCTCTGTGACGAACTGTCATATCTACGTTaGTCATCATTGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: VVFQVEFTCSQMYSLCDELSYLR*SSLGRI
Trigger: TATCCTGCCCAATGATGACAAACGTAGATATGACAG...TTCGTCACAGAGAGAGTACATCTGTGAACAAGTAAACTCTACTTGGAAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGCTGTCATATCTACGTTaGTCATCATTGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: HSESLLCPIKNDENLMLWLSYLR*SSLGRI
Trigger: TATCCTGCCCAATGATGACAAACGTAGATATGACAG...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTACACACTGGCTTGGAATaGGGCATTTGGTACATAGGT +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLHTGLE*GIWYIG
Trigger: ACCTATGTACCAAATGCCCAATTCCAAGCCAGTGTG...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTCAACAAATCCTGCTATaGATTTCTGTCGATTTACGA +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLQQILL*ISVDLR
Trigger: TCGTAAATCGACAGAAATCAATAGCAGGATTTGTTG...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CAAAAGGAAGACAGGCTTACACGTTGTGGTTTCATTAGCACATCAGGTCTTCTTATTGAGAGTACCACTTaGTTAATTCAGCATTGGTAC +
Preference number: 5 (lower is better)
Translates to: QKEDRLTRCGFISTSGLLIESTT*LIQHWY
Trigger: GTACCAATGCTGAATTAACAAAGTGGTACTCTCAAT...AAGAAGACCTGATGTGCTAATGAAACCACAACGTGTAAGCCTGTCTTCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCATCTCTGTCACATATTaGAAAGGGAAACTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTISVTY*KGKLQA
Trigger: GGCTTGCAGTTTCCCTTTCAAATATGTGACAGAGAT...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCACAGGCACATATCTCTaGCAGAAAGGAAACAACGTT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTTGTYL*QKGNNV
Trigger: AACGTTGTTTCCTTTCTGCAAGAGATATGTGCCTGT...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCATCTTCACGATGTTTTaGTCTTTGGTTGTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTIFTMF*SLVVLN
Trigger: GTTGAGCACAACCAAAGACAAAAACATCGTGAAGAT...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp AAATGTTCAGTCACGTTCAGCTGTGAGATCTCTGTCACATATTTGAAAGGGAAATTGCTGCCATCTGATTaGTTAAATGTGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: KCSVTFSCEISVTYLKGKLLPSD*LNVSSG
Trigger: TCCTGAAGACACATTTAACAAATCAGATGGCAGCAA...TTTCCCTTTCAAATATGTGACAGAGATCTCACAGCTGAACGTGACTGAACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS-3UTR CAA 90 bp CTTGTTCACAGATGTACTCTCTCTGTGACGAATGCCCCATCTTTTCAATTCTTACAACAAATCCTGCTATaGATTTCTGTCGATTTACGA +
Preference number: 5 (lower is better)
Translates to: LVHRCTLSVTNAPSFQFLQQILL*ISVDLR
Trigger: TCGTAAATCGACAGAAATCAATAGCAGGATTTGTTG...TAAGAATTGAAAAGATGGGGCATTCGTCACAGAGAGAGTACATCTGTGAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS TCA 90 bp ATGTTGCTGCCTGTAGTAGTCTATATAGGTGATTTTGCTGCCATCTaGTTTGTTAAATGTGTCTTCAGGATTCTGCTTCCAATCAATATC +
Preference number: 5 (lower is better)
Translates to: MLLPVVVYIGDFAAI*FVKCVFRILLPINI
Trigger: GATATTGATTGGAAGCAGAATCCTGAAGACACATTTAACAAATCAGATGGCAGCAAAATCACCTATATAGACTACTACAGGCAGCAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGTTTTTGTCTTTGGTaGTGCTCAACCATTCCACTC +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLCFCLW*CSTIPL
Trigger: GAGTGGAATGGTTGAGCACAACCAAAGACAAAAACA...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAATAGTTGCGACCAACTaGTTCAAAATCCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLIVATN*FKIQQL
Trigger: AAGCTGCTGGATTTTGAACAAGTTGGTCGCAACTAT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp CACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGGACAATTTCTTTATGTaGCTGCCTGTAGTAGTCTAT +
Preference number: 5 (lower is better)
Translates to: HSESLLCPIKNDENLMLWDNFFM*LPVVVY
Trigger: ATAGACTACTACAGGCAGCAACATAAAGAAATTGTC...CCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCGACAATTTCTTTATGTaGCTGCCTGTAGTAGTCTAT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTDNFFM*LPVVVY
Trigger: ATAGACTACTACAGGCAGCAACATAAAGAAATTGTC...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCTATGATGCCTTCTTCTaGGACTCAATCTTGTATGTT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTYDAFF*DSILYV
Trigger: AACATACAAGATTGAGTCCAAGAAGAAGGCATCATA...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAAACCATTCTTCTGCCTaGCACGATGTTTGCGTTTTT +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLNHSSA*HDVCVF
Trigger: AAAAACGCAAACATCGTGCAAGGCAGAAGAATGGTT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATGGACCCTTGGAATTGGGCATTaGGTACATAGGTATCTTTTT +
Preference number: 5 (lower is better)
Translates to: SESLLCPIKNDENLMLWTLGIGH*VHRYLF
Trigger: AAAAAGATACCTATGTACCAAATGCCCAATTCCAAG...GGTCCATAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS TCA 90 bp GAGTTTCCATCAAATATATGGCGCTCTCCAAATTTCCTTCTATGTTaGTCAAGTAAAATTGTACGGAGATTTCCATCTTCTATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: EFPSNIWRSPNFLLC*SSKIVRRFPSSMSG
Trigger: ACCAGACATAGAAGATGGAAATCTCCGTACAATTTTACTTGATCAACATAGAAGGAAATTTGGAGAGCGCCATATATTTGATGGAAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTAATCTTCACGATGTTTTaGTCTTTGGTTGTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLIFTMF*SLVVLN
Trigger: GTTGAGCACAACCAAAGACAAAAACATCGTGAAGAT...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATTGCTGCCATCTGATTaGTTAAATGTGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLLLPSD*LNVSSG
Trigger: TCCTGAAGACACATTTAACAAATCAGATGGCAGCAA...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS-3UTR CAA 90 bp TATCACTCTGAATCTCTCCTGTGTCCAATCAAAAACGATGAGAATTTAATGCTATCAAAATCCAGCAGCTaGAAAGTTCTTCTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: YHSESLLCPIKNDENLMLSKSSS*KVLLKR
Trigger: TCTCTTTAGAAGAACTTTCAAGCTGCTGGATTTTGA...TAGCATTAAATTCTCATCGTTTTTGATTGGACACAGGAGAGATTCAGAGTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS GCA 72 bp TGGGTCCCCCAGGTGCCTCTTGTTGGTAGCTCTCCCTaGGGCGGGCTCTGCCTCGGGCGCGAGTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: WVPQVPLVGSSP*GGLCLGRESLP
Trigger: GGGCAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAACAAGAGGCACCTGGGGGACCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS GCA 72 bp CTCCCTGCGGCGGGCTCTGCCTCGGGCGCGAGTCCTTaGCCTACCAGGCATTGTGGTCCTGAAGGTGATGAC +
Preference number: 6 (lower is better)
Translates to: LPAAGSASGASP*PTRHCGPEGDD
Trigger: GTCATCACCTTCAGGACCACAATGCCTGGTAGGGCAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS GCA 72 bp GTGCCTCTTGTTGGTAGCTCTCCCTGCGGCGGGCTCTaGCTCGGGCGCGAGTCCTTGCCCTACCAGGCATTG +
Preference number: 6 (lower is better)
Translates to: VPLVGSSPCGGL*LGRESLPYQAL
Trigger: CAATGCCTGGTAGGGCAAGGACTCGCGCCCGAGGCAGAGCCCGCCGCAGGGAGAGCTACCAACAAGAGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CCA 72 bp TCCTCTTGCTGCTCTTGGCTGCAGAGGTCTAACCACTaGGACTTCCTCCTGCAGCGGCCGGGGTGTCGACTG +
Preference number: 6 (lower is better)
Translates to: SSCCSWLQRSNH*DFLLQRPGCRL
Trigger: CAGTCGACACCCCGGCCGCTGCAGGAGGAAGTCCCAGTGGTTAGACCTCTGCAGCCAAGAGCAGCAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS GCA 72 bp ACTCCACCAATCCTTCTCTCCTGCAAGGGCGCTGTATaGAACCCAGCCTCAGGTCCAGGTTCCTTCACCCCT +
Preference number: 6 (lower is better)
Translates to: TPPILLSCKGAV*NPASGPGSFTP
Trigger: AGGGGTGAAGGAACCTGGACCTGAGGCTGGGTTGCATACAGCGCCCTTGCAGGAGAGAAGGATTGGTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS TCA 72 bp GCAGAAAGGAAACAACGTTACAGGGCTCACTGTAGCTaGTCCAGGTGCTCTGGGTCCCCCAGGTGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: AERKQRYRAHCS*SRCSGSPRCLL
Trigger: CAAGAGGCACCTGGGGGACCCAGAGCACCTGGATCAGCTACAGTGAGCCCTGTAACGTTGTTTCCTTTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS CCA 72 bp TCCTCCAGCCATGATGACGCCGGCCACTTCCACAGATaGAAAAATAATTCAGGACAAGCCACTGGAGGGGGT +
Preference number: 6 (lower is better)
Translates to: SSSHDDAGHFHR*KNNSGQATGGG
Trigger: ACCCCCTCCAGTGGCTTGTCCTGAATTATTTTTCCATCTGTGGAAGTGGCCGGCGTCATCATGGCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
CDS CCA 72 bp CAACCCACTGAGGACGAGATATCACTCGGAAGTGGTTaGCGAGTAGCTGTACCACTGTACCCTCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: QPTEDEISLGSG*RVAVPLYPLNL
Trigger: CAGGTTCAGAGGGTACAGTGGTACAGCTACTCGCCAACCACTTCCGAGTGATATCTCGTCCTCAGTGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CAA 90 bp AGCACATCAGGTCTTCTTCTGCAGGTCAAAGGTAAAAGAGACGAGTaGACAAGGAACGATTCGGTTCCTGGTGAATGGACTGCCCCACGA +
Preference number: 6 (lower is better)
Translates to: STSGLLLQVKGKRDE*TRNDSVPGEWTAPR
Trigger: TCGTGGGGCAGTCCATTCACCAGGAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTACCTTTGACCTGCAGAAGAAGACCTGATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS TCA 72 bp GTCTTCTTCTGCAGGTCAAAGGTAAAAGAGACGAGTTaGCAAGGAACGATTCGGTTCCTGGTGAATGGACTG +
Preference number: 6 (lower is better)
Translates to: VFFCRSKVKETS*QGTIRFLVNGL
Trigger: CAGTCCATTCACCAGGAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTACCTTTGACCTGCAGAAGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS CAA 72 bp GGTCTTCTTCTGCAGGTCAAAGGTAAAAGAGACGAGTaGACAAGGAACGATTCGGTTCCTGGTGAATGGACT +
Preference number: 6 (lower is better)
Translates to: GLLLQVKGKRDE*TRNDSVPGEWT
Trigger: AGTCCATTCACCAGGAACCGAATCGTTCCTTGTCAACTCGTCTCTTTTACCTTTGACCTGCAGAAGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000533313.5
ENST00000616349.4
CDS TCA 72 bp TCACATATTTCCTTAGAAGCTTCAGTAGTCAGATCCTaGTACGAACCATGCACCTCCTCCAGCCATGATGAC +
Preference number: 6 (lower is better)
Translates to: SHISLEASVVRS*YEPCTSSSHDD
Trigger: GTCATCATGGCTGGAGGAGGTGCATGGTTCGTATCAGGATCTGACTACTGAAGCTTCTAAGGAAATATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
CDS TCA 72 bp TCCATCCCGATACACAATAACAGAATGTGGCATCGATaGTTCGTTTTTACACCAGACATCCAGGGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: SIPIHNNRMWHR*FVFTPDIQGSF
Trigger: AAAGCTGCCCTGGATGTCTGGTGTAAAAACGAATCATCGATGCCACATTCTGTTATTGTGTATCGGGATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CAA 90 bp CTCAACAACCAACTCTATGTTCTTTTCAGTACAGGCACATATCTCTaGCAGAAAGGAAACAACGTTACAGGGCTCACTGTAGCTGATCCA +
Preference number: 6 (lower is better)
Translates to: LNNQLYVLFSTGTYL*QKGNNVTGLTVADP
Trigger: TGGATCAGCTACAGTGAGCCCTGTAACGTTGTTTCCTTTCTGCAAGAGATATGTGCCTGTACTGAAAAGAACATAGAGTTGGTTGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS GCA 72 bp ATTGGCTTTAACCATTCTTCTGCCTTGCACGATGTTTaGGTTTTTCAAAACTCTTCCCGGGACGGACAAAAA +
Preference number: 6 (lower is better)
Translates to: IGFNHSSALHDV*VFQNSSRDGQK
Trigger: TTTTTGTCCGTCCCGGGAAGAGTTTTGAAAAACGCAAACATCGTGCAAGGCAGAAGAATGGTTAAAGCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CAA 72 bp GCTCACATCGGCACAGAGGGTAATGCTGTTTTCGTATaGAAGAACAGAAGTAACATAACCAAGCCAGATTTC +
Preference number: 6 (lower is better)
Translates to: AHIGTEGNAVFV*KNRSNITKPDF
Trigger: GAAATCTGGCTTGGTTATGTTACTTCTGTTCTTCAATACGAAAACAGCATTACCCTCTGTGCCGATGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CAA 72 bp CTACGTTTGTCATCATTGGGCAGGATACAAATCACCTaGAAAACCAGCAAACATGACATTCCCATCTGCAGT +
Preference number: 6 (lower is better)
Translates to: LRLSSLGRIQIT*KTSKHDIPICS
Trigger: ACTGCAGATGGGAATGTCATGTTTGCTGGTTTTCAAGGTGATTTGTATCCTGCCCAATGATGACAAACGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS CAA 72 bp CAACTCTATGTTCTTTTCAGTACAGGCACATATCTCTaGCAGAAAGGAAACAACGTTACAGGGCTCACTGTA +
Preference number: 6 (lower is better)
Translates to: QLYVLFSTGTYL*QKGNNVTGLTV
Trigger: TACAGTGAGCCCTGTAACGTTGTTTCCTTTCTGCAAGAGATATGTGCCTGTACTGAAAAGAACATAGAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533313.5
CDS CAA 90 bp GGGCATTTGGTACATAGGTATCTTTTTATGCTGTCATATCTACGTTaGTCATCATTGGGCAGGATACAAATCACCATCTGCAGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: GHLVHRYLFMLSYLR*SSLGRIQITICSVG
Trigger: ACCAACACTGCAGATGGTGATTTGTATCCTGCCCAATGATGACAAACGTAGATATGACAGCATAAAAAGATACCTATGTACCAAATGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
CDS CAA 90 bp GGGCATTTGGTACATAGGTATCTTTTTATGCTGTCATATCTACGTTaGTCATCATTGGGCAGGATACAAATCACCTTGAAAACCAGCAAA +
Preference number: 6 (lower is better)
Translates to: GHLVHRYLFMLSYLR*SSLGRIQITLKTSK
Trigger: TTTGCTGGTTTTCAAGGTGATTTGTATCCTGCCCAATGATGACAAACGTAGATATGACAGCATAAAAAGATACCTATGTACCAAATGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS TCA 72 bp CCTGTAGTAGTCTATATAGGTGATTTTGCTGCCATCTaGTTTGTTAAATGTGTCTTCAGGATTCTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: PVVVYIGDFAAI*FVKCVFRILLP
Trigger: TGGAAGCAGAATCCTGAAGACACATTTAACAAATCAGATGGCAGCAAAATCACCTATATAGACTACTACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS GCA 72 bp ATTTCTGTCGATTTACGATATCGTGGAAACAATCAATaGCAACGAACATTGTTCTTTGTACGTCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: ISVDLRYRGNNQ*QRTLFFVRLSP
Trigger: TGGAGACAGACGTACAAAGAACAATGTTCGTTGGCATTGATTGTTTCCACGATATCGTAAATCGACAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CCA 72 bp TGGTACCATGACGGTATAACTGAATGGCCTTCTTTTTaGTATAATAGTTGCGACCAACTTGTTCAAAATCCA +
Preference number: 6 (lower is better)
Translates to: WYHDGITEWPSF*YNSCDQLVQNP
Trigger: TGGATTTTGAACAAGTTGGTCGCAACTATTATACCAAAAAGAAGGCCATTCAGTTATACCGTCATGGTACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CCA 72 bp AGATTTCCAAACTGGTACCATGACGGTATAACTGAATaGCCTTCTTTTTGGTATAATAGTTGCGACCAACTT +
Preference number: 6 (lower is better)
Translates to: RFPNWYHDGITE*PSFWYNSCDQL
Trigger: AAGTTGGTCGCAACTATTATACCAAAAAGAAGGCCATTCAGTTATACCGTCATGGTACCAGTTTGGAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CAA 72 bp TATCTTTTTATGCTGTCATATCTACGTTTGTCATCATaGGGCAGGATACAAATCACCATCTGCAGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: YLFMLSYLRLSS*GRIQITICSVG
Trigger: ACCAACACTGCAGATGGTGATTTGTATCCTGCCCAATGATGACAAACGTAGATATGACAGCATAAAAAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
CDS CAA 72 bp GTACATAGGTATCTTTTTATGCTGTCATATCTACGTTaGTCATCATTGGGCAGGATACAAATCACCATCTGC +
Preference number: 6 (lower is better)
Translates to: VHRYLFMLSYLR*SSLGRIQITIC
Trigger: GCAGATGGTGATTTGTATCCTGCCCAATGATGACAAACGTAGATATGACAGCATAAAAAGATACCTATGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
CDS CAA 90 bp ATATATGGCGCTCTCCAAATTTCCTTCTATGTTGATCAAGTAAAATaGTACGGAGATTTCCATCTTCTATGTCTGGTTTGTAGTCAACGT +
Preference number: 6 (lower is better)
Translates to: IYGALQISFYVDQVK*YGDFHLLCLVCSQR
Trigger: ACGTTGACTACAAACCAGACATAGAAGATGGAAATCTCCGTACAATTTTACTTGATCAACATAGAAGGAAATTTGGAGAGCGCCATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4
CDS CAA 90 bp GTACATAGGTATCTTTTTATGCTGTCATATCTACGTTTGTCATCATaGGGCAGGATACAAATCACCTTGAAAACCAGCAAACATGACATT +
Preference number: 6 (lower is better)
Translates to: VHRYLFMLSYLRLSS*GRIQITLKTSKHDI
Trigger: AATGTCATGTTTGCTGGTTTTCAAGGTGATTTGTATCCTGCCCAATGATGACAAACGTAGATATGACAGCATAAAAAGATACCTATGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS CAA 72 bp TATCTTTTTATGCTGTCATATCTACGTTTGTCATCATaGGGCAGGATACAAATCACCTTGAAAACCAGCAAA +
Preference number: 6 (lower is better)
Translates to: YLFMLSYLRLSS*GRIQITLKTSK
Trigger: TTTGCTGGTTTTCAAGGTGATTTGTATCCTGCCCAATGATGACAAACGTAGATATGACAGCATAAAAAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS CAA 72 bp GTACATAGGTATCTTTTTATGCTGTCATATCTACGTTaGTCATCATTGGGCAGGATACAAATCACCTTGAAA +
Preference number: 6 (lower is better)
Translates to: VHRYLFMLSYLR*SSLGRIQITLK
Trigger: TTTCAAGGTGATTTGTATCCTGCCCAATGATGACAAACGTAGATATGACAGCATAAAAAGATACCTATGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332271.9
ENST00000616349.4
CDS TCA 72 bp TCAAATATATGGCGCTCTCCAAATTTCCTTCTATGTTaGTCAAGTAAAATTGTACGGAGATTTCCATCTTCT +
Preference number: 6 (lower is better)
Translates to: SNIWRSPNFLLC*SSKIVRRFPSS
Trigger: AGAAGATGGAAATCTCCGTACAATTTTACTTGATCAACATAGAAGGAAATTTGGAGAGCGCCATATATTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332271.9
ENST00000527701.5
ENST00000532537.2
ENST00000533313.5
ENST00000616349.4