RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIWIL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197181

Ensembl transcript IDs: ENST00000356766.11, ENST00000454009.6, ENST00000519884.1, ENST00000521356.5, ENST00000611073.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCCACCTGCAGAGTaGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCCATT +
Preference number: 1 (lower is better)
Translates to: GGLNGPPESPAPPAE*QYHRNLLYTGNKAI
Trigger: AATGGCCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTGACTCTGGGGGACCATTAAGACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR GCA 90 bp CAGAGTCACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTaGTCTACACAGGCAACAAGGCCATTTTCAGCTGTTACTCAGAAA +
Preference number: 1 (lower is better)
Translates to: QSHPLHLQSGSTTVT*STQATRPFSAVTQK
Trigger: TTTCTGAGTAACAGCTGAAAATGGCCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR TCA 90 bp TTAAATTCCAGGTCCTTGTCTCACCCTAATGTCCCACACTCCAAATaGAACCAGCAGTGCACCAACAATACCCATCCCTCCTCAACCTCG +
Preference number: 1 (lower is better)
Translates to: LNSRSLSHPNVPHSK*NQQCTNNTHPSSTS
Trigger: CGAGGTTGAGGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTCATTTGGAGTGTGGGACATTAGGGTGAGACAAGGACCTGGAATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR GCA 90 bp TCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTCTTCAGGCAACTTaGAATGACTTAATTATCATCTCTGGCTCCAGAAATGGGAACCAC +
Preference number: 1 (lower is better)
Translates to: STAFPSCLSNSLQAT*NDLIIISGSRNGNH
Trigger: GTGGTTCCCATTTCTGGAGCCAGAGATGATAATTAAGTCATTGCAAGTTGCCTGAAGAGAATTACTCAGGCAACTGGGAAAGGCAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR CCA 90 bp CCAAAAACACTGAAACCCATGGTATGTGATAACTTTCTAACCATCTaGACTTTGGTAGGAGTGTCACGTTTTCCAAAGCTGACTTCTGGA +
Preference number: 1 (lower is better)
Translates to: PKTLKPMVCDNFLTI*TLVGVSRFPKLTSG
Trigger: TCCAGAAGTCAGCTTTGGAAAACGTGACACTCCTACCAAAGTCCAGATGGTTAGAAAGTTATCACATACCATGGGTTTCAGTGTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR GCA 90 bp TACTTGAAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTaGCTGAGTAATTCTCTTCAGGCAACTTGCAATGACTTAATTATC +
Preference number: 1 (lower is better)
Translates to: YLKTLLHRPSTAFPS*LSNSLQATCNDLII
Trigger: GATAATTAAGTCATTGCAAGTTGCCTGAAGAGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR TCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTGTCACAGCTGAGTTCTaGGGCCGCCTTTCTTCTCAC +
Preference number: 2 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAVTAEF*GRLSSH
Trigger: GTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGAC...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR-3UTR TCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTGCAAGAGTCACAGCTaGGTTCTGAGGCCGCCTTTC +
Preference number: 2 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRCKSHS*VLRPPF
Trigger: GAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCA...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR-3UTR TCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGTGCAAGAGTCACAGCTaGGTTCTGAGGCCGCCTTTC +
Preference number: 2 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLCKSHS*VLRPPF
Trigger: GAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCA...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR GCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTTGTTACTCAGAAACTTaGTTCTTGGTGATATTAGGT +
Preference number: 2 (lower is better)
Translates to: VNHRTRSGGLNGPPESPACYSET*FLVILG
Trigger: ACCTAATATCACCAAGAAGCAAGTTTCTGAGTAACA...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR-3UTR TCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCTTTCCCAGTTGCCTaGGTAATTCTCTTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLPFPVA*VILFRQ
Trigger: TTGCCTGAAGAGAATTACTCAGGCAACTGGGAAAGG...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR CCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTCTGGCTCCAGAAATaGGAACCACTTAGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRLWLQK*EPLSWH
Trigger: GTGCCAACTAAGTGGTTCCCATTTCTGGAGCCAGAG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR CCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCAATGGCTGCTTCTGCTaGTTTCTGCAGCTCATGTTG +
Preference number: 2 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRNGCFC*FLQLML
Trigger: CAACATGAGCTGCAGAAACCAGCAGAAGCAGCCATT...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR GCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTGTTACTCAGAAACTTaGTTCTTGGTGATATTAGGT +
Preference number: 2 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRCYSET*FLVILG
Trigger: ACCTAATATCACCAAGAAGCAAGTTTCTGAGTAACA...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR-3UTR GCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAATCTCTTCAGGCAACTTaGAATGACTTAATTATCATC +
Preference number: 2 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKSLQAT*NDLIII
Trigger: GATGATAATTAAGTCATTGCAAGTTGCCTGAAGAGA...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR CCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCACTTAATTATCATCTCTaGCTCCAGAAATGGGAACCA +
Preference number: 2 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPLNYHL*LQKWEP
Trigger: TGGTTCCCATTTCTGGAGCCAGAGATGATAATTAAG...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR TCA 90 bp AAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTTCAGGCAACTTGCAATaGCTTAATTATCATCTCTGG +
Preference number: 2 (lower is better)
Translates to: KTLLHRPSTAFPSCLSNSSGNLQ*LNYHLW
Trigger: CCAGAGATGATAATTAAGTCATTGCAAGTTGCCTGA...AGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR CAA 90 bp ACACTGAAACCCATGGTATGTGATAACTTTCTAACCATCTGGACTTaGGTAGGAGTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTT +
Preference number: 2 (lower is better)
Translates to: TLKPMVCDNFLTIWT*VGVSRFPKLTSGNL
Trigger: AAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACACTCCTACCAAAGTCCAGATGGTTAGAAAGTTATCACATACCATGGGTTTCAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR CAA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACCACTTCAGTCTCTGTaGATTCTGCAAGAGTCACAG +
Preference number: 3 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAPLQSL*ILQESQ
Trigger: CTGTGACTCTTGCAGAATCAACAGAGACTGAAGTGG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR GCA 72 bp CCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTaGTCTACACAGGCAACAAGGCCATTTTCAGCTGTT +
Preference number: 3 (lower is better)
Translates to: PLHLQSGSTTVT*STQATRPFSAV
Trigger: AACAGCTGAAAATGGCCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR TCA 72 bp GTCTCTGTTGATTCTGCAAGAGTCACAGCTGAGTTCTaGGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAG +
Preference number: 3 (lower is better)
Translates to: VSVDSARVTAEF*GRLSSHQPISK
Trigger: CTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAGAATCAACAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR-3UTR CAA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCAGTACCACCGTAACTaGCTCTACACAGGCAACAAG +
Preference number: 3 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLQYHRN*LYTGNK
Trigger: CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTG...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR TCA 72 bp AGGTCCTTGTCTCACCCTAATGTCCCACACTCCAAATaGAACCAGCAGTGCACCAACAATACCCATCCCTCC +
Preference number: 3 (lower is better)
Translates to: RSLSHPNVPHSK*NQQCTNNTHPS
Trigger: GGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTCATTTGGAGTGTGGGACATTAGGGTGAGACAAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR CAA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCTGTTACTCAGAAACTaGCTTCTTGGTGATATTAGG +
Preference number: 3 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKLLLRN*LLGDIR
Trigger: CCTAATATCACCAAGAAGCAAGTTTCTGAGTAACAG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
3UTR-3UTR CAA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGCCACTTCAGTCTCTGTaGATTCTGCAAGAGTCACAG +
Preference number: 3 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLPLQSL*ILQESQ
Trigger: CTGTGACTCTTGCAGAATCAACAGAGACTGAAGTGG...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR GCA 72 bp CAGCAAAGTGAGCCAACAGCCAGGAAGCGGTTATTTTaGAAGAGAAAGGGGGTAATTCCATTTACAAACATA +
Preference number: 3 (lower is better)
Translates to: QQSEPTARKRLF*KRKGVIPFTNI
Trigger: TATGTTTGTAAATGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACTTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR CCA 72 bp CTGAAACCCATGGTATGTGATAACTTTCTAACCATCTaGACTTTGGTAGGAGTGTCACGTTTTCCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: LKPMVCDNFLTI*TLVGVSRFPKL
Trigger: CAGCTTTGGAAAACGTGACACTCCTACCAAAGTCCAGATGGTTAGAAAGTTATCACATACCATGGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR-3UTR CAA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAACTGTTACTCAGAAACTaGCTTCTTGGTGATATTAGG +
Preference number: 3 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKLLLRN*LLGDIR
Trigger: CCTAATATCACCAAGAAGCAAGTTTCTGAGTAACAG...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTGTCACCCGCTCCACCTaGAGAGTGGCAGTACCACCG +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAVTRST*RVAVPP
Trigger: CGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTGAC...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCAAATACATGGCCTCTaGCTGCAGGTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAQIHGL*LQVLPC
Trigger: GCAGGGGAGCACCTGCAGGCAGAGGCCATGTATTTG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTGTCAACAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAVNRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGTTGAC...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCGTACAGCCTGGCACTaGGATGGGTGGATAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPARTAWH*DGWIGD
Trigger: GTCTCCTATCCACCCATCCCAGTGCCAGGCTGTACG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCGAACATTGACAACCTaGGAGGGCACTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPARTLTT*EGTGDC
Trigger: GCAGTCCCCAGTGCCCTCCCAGGTTGTCAATGTTCG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCATACATGGCCTCTGCCTaGAGGTGCTCCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAYMASA*RCSPAQ
Trigger: CTGGGCAGGGGAGCACCTGCAGGCAGAGGCCATGTA...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGGGCGATCTGGAGAGTaGAGGGGAGACTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAGRSGE*RGDWGR
Trigger: TCTGCCCCAGTCTCCCCTGCACTCTCCAGATCGCCC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCCTTCGGATGCTAGCTaGATAGCCTGGCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAPSDAS*IAWPDL
Trigger: CAGATCTGGCCAGGCTATGCAGCTAGCATCCGAAGG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCATGGCACTGGGATGGGTaGATAGGAGACTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAWHWDG*IGDWPL
Trigger: CAGGGGCCAGTCTCCTATCCACCCATCCCAGTGCCA...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCCAGGCCTCGGAACATaGAGACCAAACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAPGLGT*RPNPQT
Trigger: AGTCTGTGGGTTTGGTCTCCATGTTCCGAGGCCTGG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGACCAGAGGGCGATCTaGAGAGTGCAGGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQADQRAI*RVQGRL
Trigger: CAGTCTCCCCTGCACTCTCCAGATCGCCCTCTGGTC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCTCCTCAACCTCGGCTaGGCACCGCAACAAACCAAA +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPALLNLG*APQQTK
Trigger: TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCAATGGTTCGAACATTaGCAACCTGGGAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAQWFEH*QPGRAL
Trigger: CAGTGCCCTCCCAGGTTGTCAATGTTCGAACCATTG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAACTGCAGGTGCTCCCCTaGCCAGAGCTGGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKLQVLP*PELGPK
Trigger: CTTTGGACCCAGCTCTGGGCAGGGGAGCACCTGCAG...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCTGCAGGTGCTCCCCTaGCCAGAGCTGGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRLQVLP*PELGPK
Trigger: CTTTGGACCCAGCTCTGGGCAGGGGAGCACCTGCAG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTCACCCGCTCCACCTaGAGAGTGGCAGTACCACCG +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKVTRST*RVAVPP
Trigger: CGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTGAC...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTACCAGTTCTCGAGCCTaGTCCATTGCTCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPATSSRA*SIALFG
Trigger: CCCAAAGAGAGCAATGGACCAGGCTCGAGAACTGGT...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTTCATACGCATGCCAATaGGGCCGGCTATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPASYACQ*GRLSSP
Trigger: TGGAGAAGATAGCCGGCCCCATTGGCATGCGTATGA...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCATTGCCGGTGACAGCTTaGTGGTCCTTCAACATGCCG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQALPVTA*WSFNMP
Trigger: CGGCATGTTGAAGGACCATCAAGCTGTCACCGGCAA...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTTCTTCTCCAACATGTTaGCCAGTTCTCGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPASSPTC*PVLEPG
Trigger: ACCAGGCTCGAGAACTGGTCAACATGTTGGAGAAGA...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACGAAGCCTGGTGGGCTaGCCAATGGTTCGAACATTG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQARSLVG*PMVRTL
Trigger: CAATGTTCGAACCATTGGTCAGCCCACCAGGCTTCG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACTGGTTAATTACCTGTaGGCGAGTCCTCGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQALVNYL*ASPRPS
Trigger: ACTGGGGCGAGGACTCGCGCACAGGTAATTAACCAG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAAGGTCTCTGCCATCTTaGTGTCCCCAGCCGCCAACA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCARSLPS*CPQPPT
Trigger: TGTTGGCGGCTGGGGACAGCAAGATGGCAGAGACCT...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAACCAACGGAGGTCTCTaGCATCTTGCTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCATNGGL*HLAVPS
Trigger: GCTGGGGACAGCAAGATGGCAGAGACCTCCGTTGGT...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACCTTCGGATGCTAGCTaGATAGCCTGGCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAPSDAS*IAWPDL
Trigger: CAGATCTGGCCAGGCTATGCAGCTAGCATCCGAAGG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGTGGGCTCATACGCATaGCAATGGGGCCGGCTATCT +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAVGSYA*QWGRLS
Trigger: AGATAGCCGGCCCCATTGGCATGCGTATGAGCCCAC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACTGGCCCCTGAACGATaGTCGGAAAGGATCCATGGA +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQALAPER*SERIHG
Trigger: TCCATGGATCCTTTCCGACCATCGTTCAGGGGCCAG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGGGTGGATAGGAGACTaGCCCCTGAACGATGGTCGG +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSGWIGD*PLNDGR
Trigger: CCGACCATCGTTCAGGGGCCAGTCTCCTATCCACCC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTGGCACTGGGATGGGTaGATAGGAGACTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKWHWDG*IGDWPL
Trigger: CAGGGGCCAGTCTCCTATCCACCCATCCCAGTGCCA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGGCATCCGTACAGCCTaGCACTGGGATGGGTGGATA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAGIRTA*HWDGWI
Trigger: TATCCACCCATCCCAGTGCCAGGCTGTACGGATGCC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCATTGTGGCCAACAGCCTaGCATCCGTACAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCALWPTA*HPYSLA
Trigger: TGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAA...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAAGACTCCCTTTGTGCTaGCCCCCTCTGTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCARLPLC*PPLCAW
Trigger: CCAAGCACACAGAGGGGGCCAGCACAAAGGGAGTCT...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGGACCAGAGGGCGATCTaGAGAGTGCAGGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRDQRAI*RVQGRL
Trigger: CAGTCTCCCCTGCACTCTCCAGATCGCCCTCTGGTC...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGAACCTGGGAGGGCACTaGGGACTGCACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKNLGGH*GLHTAQ
Trigger: CTGTGCTGTGTGCAGTCCCCAGTGCCCTCCCAGGTT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTAACCTGGGAGGGCACTaGGGACTGCACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSNLGGH*GLHTAQ
Trigger: CTGTGCTGTGTGCAGTCCCCAGTGCCCTCCCAGGTT...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACACTCCGAAGCCTGGTaGGCTGACCAATGGTTCGAA +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAHSEAW*ADQWFE
Trigger: TTCGAACCATTGGTCAGCCCACCAGGCTTCGGAGTG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTGCACAGCTGGATGGCTaGTTCATGATGCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAAQLDG*FMMQDV
Trigger: CACATCTTGCATCATGAACCAGCCATCCAGCTGTGC...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGCTCCACCTGCAGAGTaGCAGTACCACCGTAACTTG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAAPPAE*QYHRNL
Trigger: CAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCTCTCACTGGGCCTGTaGATCAGCAATGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRLSLGL*ISNGWS
Trigger: GGACCAGCCATTGCTGATTCACAGGCCCAGTGAGAG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GAAACCAGCAGTGCACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCCAATGGTTCGAACATTaGCAACCTGGGAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: ETSSAPTIPIPPQPRLGTQWFEH*QPGRAL
Trigger: CAGTGCCCTCCCAGGTTGTCAATGTTCGAACCATTG...GGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGTCACAGCTGAGTTCTaGGGCCGCCTTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAVTAEF*GRLSSH
Trigger: GTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGAC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCACAGACTCCCTTTGTaGTGGCCCCCTCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKHRLPL*WPPLCA
Trigger: AGCACACAGAGGGGGCCAGCACAAAGGGAGTCTGTG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTGGCTGCCTCGTTCTTTaGAATTCTTTGCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAGCLVL*NSLQQA
Trigger: TGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCC...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCAACCACGGAGCGCATaGCTCTACTGGGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRQPRSA*LYWGHG
Trigger: ACCATGACCCCAGTAGAGGCATGCGCTCCGTGGTTG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCAACCACGGAGCGCATaGCTCTACTGGGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKQPRSA*LYWGHG
Trigger: ACCATGACCCCAGTAGAGGCATGCGCTCCGTGGTTG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTCAACAGGCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKVNRLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGCCTGTTGAC...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGTCGGAAAGGATCCATaGACGGGCTGTAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAVGKDP*TGCREH
Trigger: GTGTTCTCTACAGCCCGTCCATGGATCCTTTCCGAC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGGGGTGGATAGGAGACTaGCCCCTGAACGATGGTCGG +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQGWIGD*PLNDGR
Trigger: CCGACCATCGTTCAGGGGCCAGTCTCCTATCCACCC...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCGTACAGCCTGGCACTaGGATGGGTGGATAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSRTAWH*DGWIGD
Trigger: GTCTCCTATCCACCCATCCCAGTGCCAGGCTGTACG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGGCATCCGTACAGCCTaGCACTGGGATGGGTGGATA +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSGIRTA*HWDGWI
Trigger: TATCCACCCATCCCAGTGCCAGGCTGTACGGATGCC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTTTGTGGCCAACAGCCTaGCATCCGTACAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSLWPTA*HPYSLA
Trigger: TGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAA...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAGGTTTAGAAGCTTGTaGCCAACAGCCTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQARFRSL*PTAWHP
Trigger: CGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTAGACTCCCTTTGTGCTaGCCCCCTCTGTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSRLPLC*PPLCAW
Trigger: CCAAGCACACAGAGGGGGCCAGCACAAAGGGAGTCT...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCCTGTGAATCAGCAATaGCTGGTCCTCTTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAPVNQQ*LVLFLN
Trigger: GTTAAGGAAGAGGACCAGCCATTGCTGATTCACAGG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCATTCCAAAGCACTATaGTGTTGCTTGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAHSKAL*CCLGLR
Trigger: TCTGAGCCCCAAGCAACACCATAGTGCTTTGGAATG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTAACGCATCAGTTCATTaGTGGCTGCCTCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPANASVH*WLPRSL
Trigger: CAAAGAACGAGGCAGCCACCAATGAACTGATGCGTT...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCGAACATTGACAACCTaGGAGGGCACTGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRRTLTT*EGTGDC
Trigger: GCAGTCCCCAGTGCCCTCCCAGGTTGTCAATGTTCG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCACACTCCGAAGCCTaGTGGGCTGACCAATGGTTC +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSPHSEA*WADQWF
Trigger: GAACCATTGGTCAGCCCACCAGGCTTCGGAGTGTGG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTTTCAGTCCCAAAGACTaGGGTGTTCCTTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAFSPKD*GVPFDP
Trigger: AGGATCAAAAGGAACACCTCAGTCTTTGGGACTGAA...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTTTTAGCAGCATCCCATaGTTATCCTGTCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAFSSIP*LSCLSL
Trigger: CAGTGAGAGACAGGATAATCATGGGATGCTGCTAAA...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCTGTCCACAATCTCCTaGTGCGGCATCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSLSTIS*CGIWNT
Trigger: GGTGTTCCAGATGCCGCATCAGGAGATTGTGGACAG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTGCAAGAGTCACAGCTaGGTTCTGAGGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKCKSHS*VLRPPF
Trigger: GAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCTGGTTAATTACCTGTaGGCGAGTCCTCGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSLVNYL*ASPRPS
Trigger: ACTGGGGCGAGGACTCGCGCACAGGTAATTAACCAG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGAGGTCTCTGCCATCTTaGTGTCCCCAGCCGCCAACA +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQRSLPS*CPQPPT
Trigger: TGTTGGCGGCTGGGGACAGCAAGATGGCAGAGACCT...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGGTGGGCTCATACGCATaGCAATGGGGCCGGCTATCT +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQVGSYA*QWGRLS
Trigger: AGATAGCCGGCCCCATTGGCATGCGTATGAGCCCAC...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGGTGAGATTGATGCTTaGCACGAAGCCAACCACGGA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAGEIDA*HEANHG
Trigger: TCCGTGGTTGGCTTCGTGGCAAGCATCAATCTCACC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTTCCCCTGCCCAGAGCTaGGTCCAAAGGTTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSSPAQS*VQRFRS
Trigger: GCTTCTAAACCTTTGGACCCAGCTCTGGGCAGGGGA...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTCCCCTGCCCAGAGCTaGGTCCAAAGGTTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKSPAQS*VQRFRS
Trigger: GCTTCTAAACCTTTGGACCCAGCTCTGGGCAGGGGA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTTCAACCCAGGCCGGTaGGCTCATACGCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRFNPGR*AHTHAN
Trigger: ATTGGCATGCGTATGAGCCCACCGGCCTGGGTTGAA...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCACTCCGAAGCCTGGTaGGCTGACCAATGGTTCGAA +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSHSEAW*ADQWFE
Trigger: TTCGAACCATTGGTCAGCCCACCAGGCTTCGGAGTG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAGCGCATGCCTCTACTaGGGTCATGGTAAACATCCA +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQASACLY*GHGKHP
Trigger: TGGATGTTTACCATGACCCCAGTAGAGGCATGCGCT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTGAGGAATCTCATAGTTaGCAACTGTCTTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAEESHS*QLSSVG
Trigger: GCCAACTGAAGACAGTTGCCAACTATGAGATTCCTC...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCATGGATGGCTGGTTCATaGTGCAAGATGTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAWMAGS*CKMCPD
Trigger: GTCAGGACACATCTTGCATCATGAACCAGCCATCCA...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAACTCCCACCCCAACTTaGACTTTCCTAGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCATPTPT*TFLAAR
Trigger: TCTAGCAGCTAGGAAAGTTCAAGTTGGGGTGGGAGT...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACATGCCGAACCTCATaGTTTTGCACTCCACATTGG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQATCRTS*FCTPHW
Trigger: CCAATGTGGAGTGCAAAAGCATGAGGTTCGGCATGT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCATTATGTACATCCTTTTaGAGACGGAGCCCCCAACGC +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCALCTSF*RRSPQR
Trigger: GCGTTGGGGGCTCCGTCTGCAAAAGGATGTACATAA...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGGTGAGATTGATGCTTaGCACGAAGCCAACCACGGA +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSGEIDA*HEANHG
Trigger: TCCGTGGTTGGCTTCGTGGCAAGCATCAATCTCACC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCCATCTCCAAGCTGTaGAGTCACAGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSPISKL*SHRKNR
Trigger: CCTGTTCTTCCTGTGACTGCACAGCTTGGAGATGGG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAGTACCACCGTAACTTaGTCTACACAGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQASTTVT*STQATR
Trigger: CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGAGGTTTAGAAGCTTGTaGCCAACAGCCTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKRFRSL*PTAWHP
Trigger: CGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCATTGGATCCCAAAAAGTaGGAGAGAGTTCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQALDPKK*ERVPPC
Trigger: ACAGGGAGGAACTCTCTCCCACTTTTTGGGATCCAA...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GAAACCAGCAGTGCACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCTTCCGAATGACCTTATaGGAGACATCAGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: ETSSAPTIPIPPQPRLGTFRMTL*ETSASR
Trigger: CCTGCTAGCTGATGTCTCCCATAAGGTCATTCGGAA...GGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGCATCAGTTCATTGGTaGCTGCCTCGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAASVHW*LPRSLQ
Trigger: TTGCAAAGAACGAGGCAGCCACCAATGAACTGATGC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTTCATACGCATGCCAATaGGGCCGGCTATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSSYACQ*GRLSSP
Trigger: TGGAGAAGATAGCCGGCCCCATTGGCATGCGTATGA...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAGGAAAGCTAGCTTGTaGGCATACTTGCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQARKASL*AYLQGA
Trigger: AGCTCCTTGCAAGTATGCCCACAAGCTAGCTTTCCT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCATCTCGCACAGCTGGATaGCTGGTTCATGATGCAAGA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCASRTAG*LVHDAR
Trigger: TCTTGCATCATGAACCAGCCATCCAGCTGTGCGAGA...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCATTCAGTCCCAAAGACTaGGGTGTTCCTTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAFSPKD*GVPFDP
Trigger: AGGATCAAAAGGAACACCTCAGTCTTTGGGACTGAA...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCACACAGTCATTCCGAATaGCCTTATGGGAGACATCAG +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAHSHSE*PYGRHQ
Trigger: CTGATGTCTCCCATAAGGTCATTCGGAATGACTGTG...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGATAAATGGCATGCATaGCATCCAGCACACAGTCAT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQADKWHA*HPAHSH
Trigger: ATGACTGTGTGCTGGATGTCATGCATGCCATTTATC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCTTGGGGCTCAGATTaGTTTGCTGAGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKAWGSD*FAEPNP
Trigger: AGGATTTGGCTCAGCAAATCAATCTGAGCCCCAAGC...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGGCTTGGGGCTCAGATTaGTTTGCTGAGCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRAWGSD*FAEPNP
Trigger: AGGATTTGGCTCAGCAAATCAATCTGAGCCCCAAGC...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTCTTCTCCAACATGTTaGCCAGTTCTCGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRSSPTC*PVLEPG
Trigger: ACCAGGCTCGAGAACTGGTCAACATGTTGGAGAAGA...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCACAGCACAGCTTCTTaGTGGCCCCATAGAGATCAT +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSHSTAS*WPHRDH
Trigger: ATGATCTCTATGGGGCCATCAAGAAGCTGTGCTGTG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCGAAGCCTGGTGGGCTaGCCAATGGTTCGAACATTG +
Preference number: 4 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLRSLVG*PMVRTL
Trigger: CAATGTTCGAACCATTGGTCAGCCCACCAGGCTTCG...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTGGATGGCTGGTTCATaGTGCAAGATGTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRWMAGS*CKMCPD
Trigger: GTCAGGACACATCTTGCATCATGAACCAGCCATCCA...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGACATGTGGCACAGTTTaGAAGTCAGCCACTCACAGC +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKTCGTV*KSATHS
Trigger: GCTGTGAGTGGCTGACTTTCAAACTGTGCCACATGT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAAGCCTCGACCTAAAATaGCTCTACCTGATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCASLDLK*LYLMEA
Trigger: TGCTTCCATCAGGTAGAGGCATTTTAGGTCGAGGCT...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCATTGTAGAAGGGAATaGACAGGTCAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKHCRRE*TGQSRA
Trigger: AGCCCTGCTCTGACCTGTGCATTCCCTTCTACAATG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGGCCTCGGAACATaGAGACCAAACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLPGLGT*RPNPQT
Trigger: AGTCTGTGGGTTTGGTCTCCATGTTCCGAGGCCTGG...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCTTCTTCATCTTCTCTaGGATTCCGGTCATAAAAGA +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPALLHLL*DSGHKR
Trigger: TCTTTTATGACCGGAATCCCAGAGAAGATGAAGAAG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAATAGAGATCATCACGTaGGCCCATGATGATGCAAAC +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAIEIIT*AHDDAN
Trigger: GTTTGCATCATCATGGGCCCACGTGATGATCTCTAT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGAGCGCATGCCTCTACTaGGGTCATGGTAAACATCCA +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRSACLY*GHGKHP
Trigger: TGGATGTTTACCATGACCCCAGTAGAGGCATGCGCT...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAAGCACAGCTGGATGGCTaGTTCATGATGCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKAQLDG*FMMQDV
Trigger: CACATCTTGCATCATGAACCAGCCATCCAGCTGTGC...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAACTCTGGCTCCAGAAATaGGAACCACTTAGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKLWLQK*EPLSWH
Trigger: GTGCCAACTAAGTGGTTCCCATTTCTGGAGCCAGAG...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGATAAATGGCATGCATaGCATCCAGCACACAGTCAT +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCADKWHA*HPAHSH
Trigger: ATGACTGTGTGCTGGATGTCATGCATGCCATTTATC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAATCCCATCAGACATCGTaGAGCTATCCTTTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKSHQTS*SYPLES
Trigger: AGACTCCAAAGGATAGCTTCACGATGTCTGATGGGA...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTCCCATCAGACATCGTaGAGCTATCCTTTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKSHQTS*SYPLES
Trigger: AGACTCCAAAGGATAGCTTCACGATGTCTGATGGGA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GAAACCAGCAGTGCACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCAATCCTTCATGGCTCTaGAGTCCTTCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ETSSAPTIPIPPQPRLGTNPSWL*SPSSSS
Trigger: AGAAGATGAAGAAGGACTTCAGAGCCATGAAGGATT...GGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GAAACCAGCAGTGCACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCCAGCTTGTTATTGTATaGTCTACCACAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETSSAPTIPIPPQPRLGTQLVIV*STTVPG
Trigger: TCCTGGAACTGTGGTAGATCATACAATAACAAGCTG...GGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACAGCTTGTTATTGTATaGTCTACCACAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAQLVIV*STTVPG
Trigger: TCCTGGAACTGTGGTAGATCATACAATAACAAGCTG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAATCAGGTTTGCGGTGTTaGGAACACAGACATAATGCG +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKSGLRC*EHRHNA
Trigger: CGCATTATGTCTGTGTTCTCAACACCGCAAACCTGA...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCCCAATAAAGCAAGATaGGACAGAACTAGGCCCGAA +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKPNKAR*DRTRPE
Trigger: TTCGGGCCTAGTTCTGTCTCATCTTGCTTTATTGGG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGGTCCCACACTCCAAATaGAACCAGCAGTGCACCAAC +
Preference number: 4 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLVPHSK*NQQCTN
Trigger: GTTGGTGCACTGCTGGTTTCATTTGGAGTGTGGGAC...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GAAACCAGCAGTGCACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCTTATTTCCCACCCCATaGCCCAATCATTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: ETSSAPTIPIPPQPRLGTLFPTP*PNHLAL
Trigger: TAATGCCAAATGATTGGGTCATGGGGTGGGAAATAA...GGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCAAATACATGGCCTCTaGCTGCAGGTGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRQIHGL*LQVLPC
Trigger: GCAGGGGAGCACCTGCAGGCAGAGGCCATGTATTTG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCAACCAACGGAGGTCTCTaGCATCTTGCTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPTNGGL*HLAVPS
Trigger: GCTGGGGACAGCAAGATGGCAGAGACCTCCGTTGGT...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTACATGCCGAACCTCATaGTTTTGCACTCCACATTGG +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSTCRTS*FCTPHW
Trigger: CCAATGTGGAGTGCAAAAGCATGAGGTTCGGCATGT...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGATGGTCCTTCAACATaGCGAACCTCATGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKDGPST*RTSCFC
Trigger: GCAAAAGCATGAGGTTCGGCATGTTGAAGGACCATC...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGATGGTCCTTCAACATaGCGAACCTCATGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSDGPST*RTSCFC
Trigger: GCAAAAGCATGAGGTTCGGCATGTTGAAGGACCATC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAAAGCACTATGGTGTTaGTTGGGGCTCAGATTGATT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAKALWC*LGLRLI
Trigger: AATCAATCTGAGCCCCAAGCAACACCATAGTGCTTT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGGCTGCCTCGTTCTTTaGAATTCTTTGCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKGCLVL*NSLQQA
Trigger: TGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCC...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGGAAAAGGCTTCATCTaGACTCTTTCAAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAGKGFI*TLSRGQ
Trigger: TTGGCCTCTTGAAAGAGTGCAGATGAAGCCTTTTCC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGTGTCGATCCTGTTCTaGTTAATTACCTGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSVSILF*LITCAR
Trigger: TCGCGCACAGGTAATTAACCAGAACAGGATCGACAC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGAGCCGCCAACACTTTTaGATCCCAAAAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKSRQHF*IPKSGR
Trigger: TCTCCCACTTTTTGGGATCCAAAAGTGTTGGCGGCT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTTCCGAATGACCTTATaGGAGACATCAGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRFRMTL*ETSASR
Trigger: CCTGCTAGCTGATGTCTCCCATAAGGTCATTCGGAA...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCCTGTGAATCAGCAATaGCTGGTCCTCTTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKPVNQQ*LVLFLN
Trigger: GTTAAGGAAGAGGACCAGCCATTGCTGATTCACAGG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGTATCCTGTCTCTCACTaGGCCTGTGAATCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRYPVSH*ACESAM
Trigger: CATTGCTGATTCACAGGCCCAGTGAGAGACAGGATA...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCATTCCAAAGCACTATaGTGTTGCTTGGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKHSKAL*CCLGLR
Trigger: TCTGAGCCCCAAGCAACACCATAGTGCTTTGGAATG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGCAACTGTCTTCAGTTaGCCATCAGACACTCCATCA +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSATVFS*PSDTPS
Trigger: TGATGGAGTGTCTGATGGCCAACTGAAGACAGTTGC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCCACAGTTCCAGGAGTaGGAGTTACAAAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRPQFQE*ELQSSE
Trigger: CTCAGAACTTTGTAACTCCCACTCCTGGAACTGTGG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGAGGAAAGCTAGCTTGTaGGCATACTTGCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKRKASL*AYLQGA
Trigger: AGCTCCTTGCAAGTATGCCCACAAGCTAGCTTTCCT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGTCTCGCACAGCTGGATaGCTGGTTCATGATGCAAGA +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQSRTAG*LVHDAR
Trigger: TCTTGCATCATGAACCAGCCATCCAGCTGTGCGAGA...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAATTTAGCAGCATCCCATaGTTATCCTGTCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKFSSIP*LSCLSL
Trigger: CAGTGAGAGACAGGATAATCATGGGATGCTGCTAAA...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCTCAGATTGATTTGCTaGGCCAAATCCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRLRLIC*AKSFMA
Trigger: AGCCATGAAGGATTTGGCTCAGCAAATCAATCTGAG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTGTCCACAATCTCCTaGTGCGGCATCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRLSTIS*CGIWNT
Trigger: GGTGTTCCAGATGCCGCATCAGGAGATTGTGGACAG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCAGTCACAGCTGAGTTCTaGGGCCGCCTTTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPVTAEF*GRLSSH
Trigger: GTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGAC...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGCCTTTCCCAGTTGCCTaGGTAATTCTCTTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQPFPVA*VILFRQ
Trigger: TTGCCTGAAGAGAATTACTCAGGCAACTGGGAAAGG...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAATGCTGGAAAGTTACTaGAATCCACGGAAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAMLESY*NPRKRL
Trigger: AAGCCTTTTCCGTGGATTTCAGTAACTTTCCAGCAT...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGGTTTCCAAAAACACTaGAACCCATGGTATGTGATA +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAGFQKH*NPWYVI
Trigger: TATCACATACCATGGGTTTCAGTGTTTTTGGAAACC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCAGTTCATTGGTGGCTaGCTCGTTCTTTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSQFIGG*LVLCNS
Trigger: AGAATTGCAAAGAACGAGGCAGCCACCAATGAACTG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCAGTTCATTGGTGGCTaGCTCGTTCTTTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKQFIGG*LVLCNS
Trigger: AGAATTGCAAAGAACGAGGCAGCCACCAATGAACTG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGTTATGTACATCCTTTTaGAGACGGAGCCCCCAACGC +
Preference number: 4 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLLCTSF*RRSPQR
Trigger: GCGTTGGGGGCTCCGTCTGCAAAAGGATGTACATAA...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAAAAAGTGCCCAGAAATaGATGGGGATAGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAKSAQK*MGIVKM
Trigger: CATCTTGACTATCCCCATGCATTTCTGGGCACTTTT...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAATTTGAGACAGAGTCTTaGTTTGTCAACAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKFETES*FVNRLE
Trigger: CTCCAGCCTGTTGACAAAGCAAGACTCTGTCTCAAA...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTTCTCTTCAGGCAACTTaGAATGACTTAATTATCATC +
Preference number: 4 (lower is better)
Translates to: VNHRTRSGGLNGPPESPASLQAT*NDLIII
Trigger: GATGATAATTAAGTCATTGCAAGTTGCCTGAAGAGA...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAATTTTACTACACGCCTTaGACACCTGCCAGTAATAGC +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKFYYTP*TPASNS
Trigger: GCTATTACTGGCAGGTGTGCAAGGCGTGTAGTAAAA...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAGGAAGCGGTTATTTTaGAAGAGAAAGGGGGTAATT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQARKRLF*KRKGVI
Trigger: AATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGGTGTCGATCCTGTTCTaGTTAATTACCTGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQVSILF*LITCAR
Trigger: TCGCGCACAGGTAATTAACCAGAACAGGATCGACAC...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCACTGGCCCCTGAACGATaGTCGGAAAGGATCCATGGA +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPLAPER*SERIHG
Trigger: TCCATGGATCCTTTCCGACCATCGTTCAGGGGCCAG...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGTTGGATCCCAAAAAGTaGGAGAGAGTTCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQLDPKK*ERVPPC
Trigger: ACAGGGAGGAACTCTCTCCCACTTTTTGGGATCCAA...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGAGGAATCTCATAGTTaGCAACTGTCTTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSEESHS*QLSSVG
Trigger: GCCAACTGAAGACAGTTGCCAACTATGAGATTCCTC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAACTTTCTAACCATCTaGACTTTGGTAGGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQANFLTI*TLVGVS
Trigger: TGACACTCCTACCAAAGTCCAGATGGTTAGAAAGTT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTATGACACTGTATTTTaGCGAGGTTCAGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKYDTVF*RGSVPK
Trigger: CTTTGGGACTGAACCTCGTCAAAATACAGTGTCATA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGAATCCTTCATGGCTCTaGAGTCCTTCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKNPSWL*SPSSSS
Trigger: AGAAGATGAAGAAGGACTTCAGAGCCATGAAGGATT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGAAAGCACTATGGTGTTaGTTGGGGCTCAGATTGATT +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKKALWC*LGLRLI
Trigger: AATCAATCTGAGCCCCAAGCAACACCATAGTGCTTT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTAAAAGTGCCCAGAAATaGATGGGGATAGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSKSAQK*MGIVKM
Trigger: CATCTTGACTATCCCCATGCATTTCTGGGCACTTTT...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCTCACAGACCTTCCACTaGCTTTCCCAGTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRSQTFH*LSQLPE
Trigger: CTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGA...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGAAATCGTCATGGTATaGTGGAAAGTTACTGAAATC +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAEIVMV*WKVTEI
Trigger: GATTTCAGTAACTTTCCAGCATACCATGACGATTTC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGTTAATTCTTTCCATTaGCAGAACACGTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAVNSFH*QNTSFN
Trigger: ATTGAAGGACGTGTTCTGCCAATGGAAAGAATTAAC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCAACCAGTTCTCGAGCCTaGTCCATTGCTCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPTSSRA*SIALFG
Trigger: CCCAAAGAGAGCAATGGACCAGGCTCGAGAACTGGT...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGAATGGCTGCTTCTGCTaGTTTCTGCAGCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLNGCFC*FLQLML
Trigger: CAACATGAGCTGCAGAAACCAGCAGAAGCAGCCATT...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGTATGACACTGTATTTTaGCGAGGTTCAGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQYDTVF*RGSVPK
Trigger: CTTTGGGACTGAACCTCGTCAAAATACAGTGTCATA...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGACCCAGTTTAGTTCCTaGGATGTGATAAACGAAGTA +
Preference number: 4 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKTQFSS*DVINEV
Trigger: TACTTCGTTTATCACATCTCAGGAACTAAACTGGGT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR TCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCACAGCACAGCTTCTTaGTGGCCCCATAGAGATCAT +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRHSTAS*WPHRDH
Trigger: ATGATCTCTATGGGGCCATCAAGAAGCTGTGCTGTG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp AAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTTGCAAGAGTCACAGCTaGGTTCTGAGGCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: KTLLHRPSTAFPSCLSNSCKSHS*VLRPPF
Trigger: GAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCA...AGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAAGGGCGATCTGGAGAGTaGAGGGGAGACTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKGRSGE*RGDWGR
Trigger: TCTGCCCCAGTCTCCCCTGCACTCTCCAGATCGCCC...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAGTTCCTTTTGATCCTTaGTTCACAATAAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAVPFDP*FTISSF
Trigger: AAAAGAGCTTATTGTGAAGCAAGGATCAAAAGGAAC...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR GCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCATTGTAGAAGGGAATaGACAGGTCAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRHCRRE*TGQSRA
Trigger: AGCCCTGCTCTGACCTGTGCATTCCCTTCTACAATG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTATCTGCAATCTGTGTTaGTGTAGTACCATAGCACTT +
Preference number: 4 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSICNLC*CSTIAL
Trigger: AAGTGCTATGGTACTACAGCAACACAGATTGCAGAT...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGTTAATTCTTTCCATTaGCAGAACACGTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAVNSFH*QNTSFN
Trigger: ATTGAAGGACGTGTTCTGCCAATGGAAAGAATTAAC...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGATAGAGATCATCACGTaGGCCCATGATGATGCAAAC +
Preference number: 4 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLIEIIT*AHDDAN
Trigger: GTTTGCATCATCATGGGCCCACGTGATGATCTCTAT...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp CACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCGCAACAAACCAAACTTAATTATCATCTCTaGCTCCAGAAATGGGAACCA +
Preference number: 4 (lower is better)
Translates to: HQQYPSLLNLGWAPQQTKLNYHL*LQKWEP
Trigger: TGGTTCCCATTTCTGGAGCCAGAGATGATAATTAAG...TTTGGTTTGTTGCGGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGTTAGCCAGAGACCAGTaGTTCACAGTGTTTGATTCT +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQLARDQ*FTVFDS
Trigger: AGAATCAAACACTGTGAACCACTGGTCTCTGGCTAA...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCACAGTCATTCCGAATaGCCTTATGGGAGACATCAG +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRHSHSE*PYGRHQ
Trigger: CTGATGTCTCCCATAAGGTCATTCGGAATGACTGTG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGCTCTCACTGGGCCTGTaGATCAGCAATGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLLSLGL*ISNGWS
Trigger: GGACCAGCCATTGCTGATTCACAGGCCCAGTGAGAG...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCAAGCCTCGACCTAAAATaGCTCTACCTGATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPSLDLK*LYLMEA
Trigger: TGCTTCCATCAGGTAGAGGCATTTTAGGTCGAGGCT...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCATGTTACTCAGAAACTTaGTTCTTGGTGATATTAGGT +
Preference number: 4 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCACYSET*FLVILG
Trigger: ACCTAATATCACCAAGAAGCAAGTTTCTGAGTAACA...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCTATCCTGTCTCTCACTaGGCCTGTGAATCAGCAATG +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRYPVSH*ACESAM
Trigger: CATTGCTGATTCACAGGCCCAGTGAGAGACAGGATA...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCGCAACTGTCTTCAGTTaGCCATCAGACACTCCATCA +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRATVFS*PSDTPS
Trigger: TGATGGAGTGTCTGATGGCCAACTGAAGACAGTTGC...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCCACAGTTCCAGGAGTaGGAGTTACAAAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRPQFQE*ELQSSE
Trigger: CTCAGAACTTTGTAACTCCCACTCCTGGAACTGTGG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCATATAATGGCTGCTTCTaGTGGTTTCTGCAGCTCATG +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPYNGCF*WFLQLM
Trigger: CATGAGCTGCAGAAACCAGCAGAAGCAGCCATTATA...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCAGCAAGGGCCGACCTATaGCACAAACTGATTTTACTA +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPARADL*HKLILL
Trigger: TAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGC...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGTTCAACCCAGGCCGGTaGGCTCATACGCATGCCAAT +
Preference number: 4 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLFNPGR*AHTHAN
Trigger: ATTGGCATGCGTATGAGCCCACCGGCCTGGGTTGAA...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAACCACACTCCGAAGCCTaGTGGGCTGACCAATGGTTC +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKPHSEA*WADQWF
Trigger: GAACCATTGGTCAGCCCACCAGGCTTCGGAGTGTGG...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGGCTCCACCTGCAGAGTaGCAGTACCACCGTAACTTG +
Preference number: 4 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLAPPAE*QYHRNL
Trigger: CAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAATTGCCGGTGACAGCTTaGTGGTCCTTCAACATGCCG +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKLPVTA*WSFNMP
Trigger: CGGCATGTTGAAGGACCATCAAGCTGTCACCGGCAA...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAAGTCAGCCTCTGCATATaGTCAGGGCTCAGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKVSLCI*SGLRFA
Trigger: CGCAAACCTGAGCCCTGATCATATGCAGAGGCTGAC...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGGTTCCTTTTGATCCTTaGTTCACAATAAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RADLCHKLILLHALHTCQVPFDP*FTISSF
Trigger: AAAAGAGCTTATTGTGAAGCAAGGATCAAAAGGAAC...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTAGTACCACCGTAACTTaGTCTACACAGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: KTLLHRPSTAFPSCLSNSSTTVT*STQATR
Trigger: CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACT...AGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTAGCCGCCAACACTTTTaGATCCCAAAAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KTLLHRPSTAFPSCLSNSSRQHF*IPKSGR
Trigger: TCTCCCACTTTTTGGGATCCAAAAGTGTTGGCGGCT...AGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCATCTGCAATCTGTGTTaGTGTAGTACCATAGCACTT +
Preference number: 4 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRICNLC*CSTIAL
Trigger: AAGTGCTATGGTACTACAGCAACACAGATTGCAGAT...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAACCCATCTCCAAGCTGTaGAGTCACAGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKPISKL*SHRKNR
Trigger: CCTGTTCTTCCTGTGACTGCACAGCTTGGAGATGGG...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR GCA 90 bp AAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTATCAGAAAACTGATCTaGTTAGCCAGAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: KTLLHRPSTAFPSCLSNSIRKLI*LARDQW
Trigger: CCACTGGTCTCTGGCTAAGCAGATCAGTTTTCTGAT...AGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCAGAGCATGTGTATATTTaGGGAAGAAATCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPEHVYI*GRNRHG
Trigger: ACCATGACGATTTCTTCCCCAAATATACACATGCTC...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAAAAAATTCCAGCAAAGTaGGCCAACAGCCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKKIPAK*ANSQEA
Trigger: CGCTTCCTGGCTGTTGGCTCACTTTGCTGGAATTTT...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
43% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp AAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTTATGTGCTGCTGAAGTaGGCACATTTTACGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KTLLHRPSTAFPSCLSNSYVLLK*AHFTEF
Trigger: AAACTCCGTAAAATGTGCTCACTTCAGCAGCACATA...AGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGGCATCAGTTCATTGGTaGCTGCCTCGTTCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLASVHW*LPRSLQ
Trigger: TTGCAAAGAACGAGGCAGCCACCAATGAACTGATGC...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
3UTR CAA 72 bp CCCATGGTATGTGATAACTTTCTAACCATCTGGACTTaGGTAGGAGTGTCACGTTTTCCAAAGCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: PMVCDNFLTIWT*VGVSRFPKLTS
Trigger: AGAAGTCAGCTTTGGAAAACGTGACACTCCTACCAAAGTCCAGATGGTTAGAAAGTTATCACATACCATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGCTCAGATTGATTTGCTaGGCCAAATCCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLLRLIC*AKSFMA
Trigger: AGCCATGAAGGATTTGGCTCAGCAAATCAATCTGAG...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp AAAACTTTGCTTCACAGACCTTCCACTGCCTTTCCCAGTTGCCTGAGTAATTCTCTTCTTCATCTTCTCTaGGATTCCGGTCATAAAAGA +
Preference number: 4 (lower is better)
Translates to: KTLLHRPSTAFPSCLSNSLLHLL*DSGHKR
Trigger: TCTTTTATGACCGGAATCCCAGAGAAGATGAAGAAG...AGAATTACTCAGGCAACTGGGAAAGGCAGTGGAAGGTCTGTGAAGCAAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAAAACGCATCAGTTCATTaGTGGCTGCCTCGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKNASVH*WLPRSL
Trigger: CAAAGAACGAGGCAGCCACCAATGAACTGATGCGTT...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAAACTCCACATTGGGGCTaGAAGTCACATGATATTGAT +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKTPHWG*KSHDID
Trigger: ATCAATATCATGTGACTTTCAGCCCCAATGTGGAGT...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGATCGTCATGGTATGCTaGAAAGTTACTGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLIVMVC*KVTEIH
Trigger: GTGGATTTCAGTAACTTTCCAGCATACCATGACGAT...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAAGGGAAGAAATCGTCATaGTATGCTGGAAAGTTACTG +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKGKKSS*YAGKLL
Trigger: CAGTAACTTTCCAGCATACCATGACGATTTCTTCCC...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR TCA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAATCAGGCAACTTGCAATaGCTTAATTATCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKSGNLQ*LNYHLW
Trigger: CCAGAGATGATAATTAAGTCATTGCAAGTTGCCTGA...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS GCA 90 bp AACCCAGGACGGGCTGGGCCTGCCTCCCTCGCATCCCTGGGTGCGTaGTCCGCGCTGAGGCCTCGCGACTCGGGCCTAACCAGAAGCAAG +
Preference number: 5 (lower is better)
Translates to: NPGRAGPASLASLGA*SALRPRDSGLTRSK
Trigger: CTTGCTTCTGGTTAGGCCCGAGTCGCGAGGCCTCAGCGCGGAGCACGCACCCAGGGATGCGAGGGAGGCAGGCCCAGCCCGTCCTGGGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS GCA 90 bp TGTCCGAAAGGTTCAATGGGGAGCGAACCCAGGACGGGCTGGGCCTaGCTCCCTCGCATCCCTGGGTGCGTGCTCCGCGCTGAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: CPKGSMGSEPRTGWA*LPRIPGCVLRAEAS
Trigger: CGAGGCCTCAGCGCGGAGCACGCACCCAGGGATGCGAGGGAGGCAGGCCCAGCCCGTCCTGGGTTCGCTCCCCATTGAACCTTTCGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CCA 90 bp CTTGGCTGTCCGAAAGGTTCAATGGGGAGCGAACCCAGGACGGGCTaGGCCTGCCTCCCTCGCATCCCTGGGTGCGTGCTCCGCGCTGAG +
Preference number: 5 (lower is better)
Translates to: LGCPKGSMGSEPRTG*ACLPRIPGCVLRAE
Trigger: CTCAGCGCGGAGCACGCACCCAGGGATGCGAGGGAGGCAGGCCCAGCCCGTCCTGGGTTCGCTCCCCATTGAACCTTTCGGACAGCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CCA 90 bp CCCCTGGGATCAGGTAGCAGATACTTGGCTGTCCGAAAGGTTCAATaGGGAGCGAACCCAGGACGGGCTGGGCCTGCCTCCCTCGCATCC +
Preference number: 5 (lower is better)
Translates to: PLGSGSRYLAVRKVQ*GANPGRAGPASLAS
Trigger: GGATGCGAGGGAGGCAGGCCCAGCCCGTCCTGGGTTCGCTCCCCATTGAACCTTTCGGACAGCCAAGTATCTGCTACCTGATCCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS-3UTR CAA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTACCCACAGACTCCCTTaGTGCTGGCCCCCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: VNHRTRSGGLNGPPESPATHRLP*CWPPLC
Trigger: ACACAGAGGGGGCCAGCACAAAGGGAGTCTGTGGGT...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS CCA 90 bp AGGTGCTCCCCTGCCCAGAGCTGGGTCCAAAGGTTTAGAAGCTTGTaGCCAACAGCCTGGCATCCGTACAGCCTGGCACTGGGATGGGTG +
Preference number: 5 (lower is better)
Translates to: RCSPAQSWVQRFRSL*PTAWHPYSLALGWV
Trigger: CACCCATCCCAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTGGACCCAGCTCTGGGCAGGGGAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 90 bp AGCTTGTGGCCAACAGCCTGGCATCCGTACAGCCTGGCACTGGGATaGGTGGATAGGAGACTGGCCCCTGAACGATGGTCGGAAAGGATC +
Preference number: 5 (lower is better)
Translates to: SLWPTAWHPYSLALG*VDRRLAPERWSERI
Trigger: GATCCTTTCCGACCATCGTTCAGGGGCCAGTCTCCTATCCACCCATCCCAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 90 bp CACAGACTCCCTTTGTGCTGGCCCCCTCTGTGTGCTTGGTTCCTCTaGCTTTCCAAATACATGGCCTCTGCCTGCAGGTGCTCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: HRLPLCWPPLCAWFL*LSKYMASACRCSPA
Trigger: GGCAGGGGAGCACCTGCAGGCAGAGGCCATGTATTTGGAAAGCCAGAGGAACCAAGCACACAGAGGGGGCCAGCACAAAGGGAGTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 90 bp AGCCTGGCACTGGGATGGGTGGATAGGAGACTGGCCCCTGAACGATaGTCGGAAAGGATCCATGGACGGGCTGTAGAGAACACGTGTCGA +
Preference number: 5 (lower is better)
Translates to: SLALGWVDRRLAPER*SERIHGRAVENTCR
Trigger: TCGACACGTGTTCTCTACAGCCCGTCCATGGATCCTTTCCGACCATCGTTCAGGGGCCAGTCTCCTATCCACCCATCCCAGTGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
CDS CCA 90 bp GCCCAGAGCTGGGTCCAAAGGTTTAGAAGCTTGTGGCCAACAGCCTaGCATCCGTACAGCCTGGCACTGGGATGGGTGGATAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: AQSWVQRFRSLWPTA*HPYSLALGWVDRRL
Trigger: CAGTCTCCTATCCACCCATCCCAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTGGACCCAGCTCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS-3UTR CAA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCAGCCGCCAACACTTTaGGATCCCAAAAAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAQPPTL*DPKKWE
Trigger: CTCCCACTTTTTGGGATCCAAAAGTGTTGGCGGCTG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCCAATGGTTCGAACATaGACAACCTGGGAGGGCACT +
Preference number: 5 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAPMVRT*TTWEGT
Trigger: AGTGCCCTCCCAGGTTGTCAATGTTCGAACCATTGG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS TCA 90 bp GGATGTGGTGACTCACAGAGCCCTCAGGCTACGGACCACAGTCAGTaGGAGGCCCACTCGCATTGTGTAGCCTGGAATCATGGCAGATCC +
Preference number: 5 (lower is better)
Translates to: GCGDSQSPQATDHSQ*EAHSHCVAWNHGRS
Trigger: GGATCTGCCATGATTCCAGGCTACACAATGCGAGTGGGCCTCTCACTGACTGTGGTCCGTAGCCTGAGGGCTCTGTGAGTCACCACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS-3UTR CAA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTGACAGGAAAGCTAGCTaGTGGGCATACTTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: VNHRTRSGGLNGPPESPADRKAS*WAYLQG
Trigger: TCCTTGCAAGTATGCCCACAAGCTAGCTTTCCTGTC...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS GCA 90 bp CTGTGTGCTTGGTTCCTCTGGCTTTCCAAATACATGGCCTCTGCCTaGAGGTGCTCCCCTGCCCAGAGCTGGGTCCAAAGGTTTAGAAGC +
Preference number: 5 (lower is better)
Translates to: LCAWFLWLSKYMASA*RCSPAQSWVQRFRS
Trigger: GCTTCTAAACCTTTGGACCCAGCTCTGGGCAGGGGAGCACCTGCAGGCAGAGGCCATGTATTTGGAAAGCCAGAGGAACCAAGCACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 90 bp AAAGGTTTAGAAGCTTGTGGCCAACAGCCTGGCATCCGTACAGCCTaGCACTGGGATGGGTGGATAGGAGACTGGCCCCTGAACGATGGT +
Preference number: 5 (lower is better)
Translates to: KGLEACGQQPGIRTA*HWDGWIGDWPLNDG
Trigger: ACCATCGTTCAGGGGCCAGTCTCCTATCCACCCATCCCAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS-3UTR CAA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCACCGAACCTCATGCTTTaGCACTCCACATTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAPNLML*HSTLGL
Trigger: CAGCCCCAATGTGGAGTGCAAAAGCATGAGGTTCGG...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTTACATGTGGCACAGTTaGAAAGTCAGCCACTCACAG +
Preference number: 5 (lower is better)
Translates to: VNHRTRSGGLNGPPESPAYMWHS*KVSHSQ
Trigger: CTGTGAGTGGCTGACTTTCAAACTGTGCCACATGTA...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521356.5
CDS-3UTR CAA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAAAGGTACAGGGAGGCTaGTCCACTTCTCTGCTGATA +
Preference number: 5 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAKVQGG*STSLLI
Trigger: TATCAGCAGAGAAGTGGACAAGCCTCCCTGTACCTT...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCCGAACCTCATGCTTTaGCACTCCACATTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRPNLML*HSTLGL
Trigger: CAGCCCCAATGTGGAGTGCAAAAGCATGAGGTTCGG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGGTTGCCGGTGACAGCTaGATGGTCCTTCAACATGCC +
Preference number: 5 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRVAGDS*MVLQHA
Trigger: GGCATGTTGAAGGACCATCAAGCTGTCACCGGCAAC...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCATGGCTGCCTCGTTCTTaGCAATTCTTTGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAWLPRS*QFFAAS
Trigger: GCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCA...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACAACGCATCAGTTCATaGGTGGCTGCCTCGTTCTTT +
Preference number: 5 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAQRISS*VAASFF
Trigger: AAAGAACGAGGCAGCCACCAATGAACTGATGCGTTG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTCTAACCATCTGGACTTaGGTAGGAGTGTCACGTTTT +
Preference number: 5 (lower is better)
Translates to: VNHRTRSGGLNGPPESPALTIWT*VGVSRF
Trigger: AAAACGTGACACTCCTACCAAAGTCCAGATGGTTAG...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCAGCCGCCAACACTTTaGGATCCCAAAAAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSQPPTL*DPKKWE
Trigger: CTCCCACTTTTTGGGATCCAAAAGTGTTGGCGGCTG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCACAAAGCACTATGGTGTaGCTTGGGGCTCAGATTGAT +
Preference number: 5 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQAQSTMV*LGAQID
Trigger: ATCAATCTGAGCCCCAAGCAACACCATAGTGCTTTG...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCTTATGTACATCCTTTaGCAGACGGAGCCCCCAACG +
Preference number: 5 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRLMYIL*QTEPPT
Trigger: CGTTGGGGGCTCCGTCTGCAAAAGGATGTACATAAG...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTGGCAACTGTCTTCAGTaGGCCATCAGACACTCCATC +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSGNCLQ*AIRHSI
Trigger: GATGGAGTGTCTGATGGCCAACTGAAGACAGTTGCC...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS TCA 90 bp TTTAAGGAGCCCACGAGGCATAGCTTCAGGCTGTCCACAATCTCCTaGTGCGGCATCTGGAACACCACCCGGGAATACCATTTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: FKEPTRHSFRLSTIS*CGIWNTTREYHFVR
Trigger: CCTCACAAAATGGTATTCCCGGGTGGTGTTCCAGATGCCGCATCAGGAGATTGTGGACAGCCTGAAGCTATGCCTCGTGGGCTCCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS TCA 90 bp CCCACTTCAGTCTCTGTTGATTCTGCAAGAGTCACAGCTGAGTTCTaGGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: PTSVSVDSARVTAEF*GRLSSHQPISKLCS
Trigger: ACTGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAGAATCAACAGAGACTGAAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356766.11
ENST00000519884.1
ENST00000521356.5
CDS-3UTR CAA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGCAAAGGTTTAGAAGCTaGTGGCCAACAGCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKQRFRS*WPTAWH
Trigger: ATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTG...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GAAACCAGCAGTGCACCAACAATACCCATCCCTCCTCAACCTCGGCTGGGCACCATAAGCTCTTTTTCCTaGTGTTCCACAGTCAGGACC +
Preference number: 5 (lower is better)
Translates to: ETSSAPTIPIPPQPRLGTISSFS*CSTVRT
Trigger: GGTCCTGACTGTGGAACACAAGGAAAAAGAGCTTAT...GGTGCCCAGCCGAGGTTGAGGAGGGATGGGTATTGTTGGTGCACTGCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGCACTATGGTGTTGCTaGGGGCTCAGATTGATTTGC +
Preference number: 5 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKALWCC*GLRLIC
Trigger: GCAAATCAATCTGAGCCCCAAGCAACACCATAGTGC...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTGGCTGCCTCGTTCTTaGCAATTCTTTGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKWLPRS*QFFAAS
Trigger: GCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCAACGCATCAGTTCATaGGTGGCTGCCTCGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSQRISS*VAASFF
Trigger: AAAGAACGAGGCAGCCACCAATGAACTGATGCGTTG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTATCTTCTCCAACATGTaGACCAGTTCTCGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSIFSNM*TSSRAW
Trigger: CCAGGCTCGAGAACTGGTCAACATGTTGGAGAAGAT...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGATCTTCTCCAACATGTaGACCAGTTCTCGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKIFSNM*TSSRAW
Trigger: CCAGGCTCGAGAACTGGTCAACATGTTGGAGAAGAT...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTTTGTGAGGGTGAGATaGATGCTTGCCACGAAGCCA +
Preference number: 5 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKFVRVR*MLATKP
Trigger: TGGCTTCGTGGCAAGCATCAATCTCACCCTCACAAA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GTGAACCACCGCACCCGGTCTGGAGGTCTTAATGGTCCCCCAGAGTCACCCGCTACTCACAGCTTGTTATaGTATGATCTACCACAGTTC +
Preference number: 5 (lower is better)
Translates to: VNHRTRSGGLNGPPESPATHSLL*YDLPQF
Trigger: GAACTGTGGTAGATCATACAATAACAAGCTGTGAGT...AGCGGGTGACTCTGGGGGACCATTAAGACCTCCAGACCGGGTGCGGTGGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGGGACAGGAAAGCTAGCTaGTGGGCATACTTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LHLQSGSTTVTCSTQATRDRKAS*WAYLQG
Trigger: TCCTTGCAAGTATGCCCACAAGCTAGCTTTCCTGTC...CCTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCACCACTTCAGTCTCTGTaGATTCTGCAAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCAPLQSL*ILQESQ
Trigger: CTGTGACTCTTGCAGAATCAACAGAGACTGAAGTGG...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCAGTACCACCGTAACTaGCTCTACACAGGCAACAAG +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSQYHRN*LYTGNK
Trigger: CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CACCCGCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCATTAAATTCCAGGTCCTaGTCTCACCCTAATGTCCCA +
Preference number: 5 (lower is better)
Translates to: HPLHLQSGSTTVTCSTQALNSRS*SHPNVP
Trigger: TGGGACATTAGGGTGAGACAAGGACCTGGAATTTAA...TGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGCGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS CCA 90 bp CTGCACACAGCACAGCTTCTTGATGGCCCCATAGAGATCATCACGTaGGCCCATGATGATGCAAACAACCATCTGTATCTTCCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LHTAQLLDGPIEIIT*AHDDANNHLYLPLS
Trigger: GCTGAGGGGAAGATACAGATGGTTGTTTGCATCATCATGGGCCCACGTGATGATCTCTATGGGGCCATCAAGAAGCTGTGCTGTGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 90 bp CCACAGTCAGTGAGAGGCCCACTCGCATTGTGTAGCCTGGAATCATaGCAGATCCTTTTGCAGTTAGTGCCAAAGCTACTGTGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: PQSVRGPLALCSLES*QILLQLVPKLLCLE
Trigger: CTCTAGGCACAGTAGCTTTGGCACTAACTGCAAAAGGATCTGCCATGATTCCAGGCTACACAATGCGAGTGGGCCTCTCACTGACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS-3UTR CAA 90 bp AGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGAGTTCCTCCCTGTCCTaGCGTACCAGATTAGCAGAC +
Preference number: 5 (lower is better)
Translates to: SKGRPMPQTDFTTRLAHLSSSLS*RTRLAD
Trigger: GTCTGCTAATCTGGTACGCAAGGACAGGGAGGAACT...CAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGTTTGTGAGGGTGAGATaGATGCTTGCCACGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RADLCHKLILLHALHTCQFVRVR*MLATKP
Trigger: TGGCTTCGTGGCAAGCATCAATCTCACCCTCACAAA...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCACTTCAGTCTCTGTaGATTCTGCAAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSPLQSL*ILQESQ
Trigger: CTGTGACTCTTGCAGAATCAACAGAGACTGAAGTGG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTATAAGCTCTTTTTCCTaGTGTTCCACAGTCAGGACC +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSISSFS*CSTVRT
Trigger: GGTCCTGACTGTGGAACACAAGGAAAAAGAGCTTAT...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCGTTGCCGGTGACAGCTaGATGGTCCTTCAACATGCC +
Preference number: 5 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRVAGDS*MVLQHA
Trigger: GGCATGTTGAAGGACCATCAAGCTGTCACCGGCAAC...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCACGGGTGATAACAATATaGCCAACCAGAAGCTTAGTA +
Preference number: 5 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCARVITI*PTRSLV
Trigger: TACTAAGCTTCTGGTTGGCAATATTGTTATCACCCG...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS GCA 90 bp ACGGAGCCCCCAACGCATCAGTTCATTGGTGGCTGCCTCGTTCTTTaGAATTCTTTGCAGCAAGCATTCCAAAGCACTATGGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: TEPPTHQFIGGCLVL*NSLQQAFQSTMVLL
Trigger: AAGCAACACCATAGTGCTTTGGAATGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGGGGGCTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS-3UTR CAA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCACTTATGTACATCCTTTaGCAGACGGAGCCCCCAACG +
Preference number: 5 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPLMYIL*QTEPPT
Trigger: CGTTGGGGGCTCCGTCTGCAAAAGGATGTACATAAG...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGCCACCCACTCACAGCTaGTTATTGTATGATCTACCA +
Preference number: 5 (lower is better)
Translates to: RADLCHKLILLHALHTCQPPTHS*LLYDLP
Trigger: TGGTAGATCATACAATAACAAGCTGTGAGTGGGTGG...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp CAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCCAAGCTGTGCACTGTTACTCAGAAACTaGCTTCTTGGTGATATTAGG +
Preference number: 5 (lower is better)
Translates to: QLSSEAAFLLTSPSPSCALLLRN*LLGDIR
Trigger: CCTAATATCACCAAGAAGCAAGTTTCTGAGTAACAG...TGCACAGCTTGGAGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp GCTCCACCTGCAGAGTGGCAGTACCACCGTAACTTGCTCTACACAGGCAACAAGTCAGCCACTCACAGCTaGTTATTGTATGATCTACCA +
Preference number: 5 (lower is better)
Translates to: APPAEWQYHRNLLYTGNKSATHS*LLYDLP
Trigger: TGGTAGATCATACAATAACAAGCTGTGAGTGGCTGA...CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTGCCACTCTGCAGGTGGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521356.5
CDS-3UTR CAA 90 bp AGTGAGCCAACAGCCAGGAAGCGGTTATTTTGCAAGAGAAAGGGGGTAATTCCACAAAGGTTTAGAAGCTaGTGGCCAACAGCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: SEPTARKRLFCKRKGVIPQRFRS*WPTAWH
Trigger: ATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTG...TGGAATTACCCCCTTTCTCTTGCAAAATAACCGCTTCCTGGCTGTTGGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCGCACTATGGTGTTGCTaGGGGCTCAGATTGATTTGC +
Preference number: 5 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRALWCC*GLRLIC
Trigger: GCAAATCAATCTGAGCCCCAAGCAACACCATAGTGC...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp CTGCAAGAGTCACAGCTGAGTTCTGAGGCCGCCTTTCTTCTCACCAGCCCATCTCTGTTACTCAGAAACTaGCTTCTTGGTGATATTAGG +
Preference number: 5 (lower is better)
Translates to: LQESQLSSEAAFLLTSPSLLLRN*LLGDIR
Trigger: CCTAATATCACCAAGAAGCAAGTTTCTGAGTAACAG...AGATGGGCTGGTGAGAAGAAAGGCGGCCTCAGAACTCAGCTGTGACTCTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356766.11
ENST00000521356.5
CDS-3UTR CAA 90 bp AGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCTTGCACACCTGCCAGAGAGCATGTGTATATTaGGGGAAGAAATCGTCATGG +
Preference number: 5 (lower is better)
Translates to: RADLCHKLILLHALHTCQRACVY*GKKSSW
Trigger: CCATGACGATTTCTTCCCCAAATATACACATGCTCT...CTGGCAGGTGTGCAAGGCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS TCA 90 bp CCATCTGTATCTTCCCCTCAGCTCCTAACGTGGATTGAATGGTTCTaGCATAAGTCTCTATTCGGTCATCCTTTAGTTCAACCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PSVSSPQLLTWIEWF*HKSLFGHPLVQPRP
Trigger: CGGCCTGGGTTGAACTAAAGGATGACCGAATAGAGACTTATGTCAGAACCATTCAATCCACGTTAGGAGCTGAGGGGAAGATACAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 90 bp CTGAGCCAAATCCTTCATGGCTCTGAAGTCCTTCTTCATCTTCTCTaGGATTCCGGTCATAAAAGAAAGCTCAGGCAGCAGCAGGATTTC +
Preference number: 5 (lower is better)
Translates to: LSQILHGSEVLLHLL*DSGHKRKLRQQQDF
Trigger: GAAATCCTGCTGCTGCCTGAGCTTTCTTTTATGACCGGAATCCCAGAGAAGATGAAGAAGGACTTCAGAGCCATGAAGGATTTGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS-3UTR CAA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAAACCCACAGACTCCCTTaGTGCTGGCCCCCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKTHRLP*CWPPLC
Trigger: ACACAGAGGGGGCCAGCACAAAGGGAGTCTGTGGGT...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCCAAAGCACTATGGTGTaGCTTGGGGCTCAGATTGAT +
Preference number: 5 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRQSTMV*LGAQID
Trigger: ATCAATCTGAGCCCCAAGCAACACCATAGTGCTTTG...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS CCA 90 bp CATCCCATGATTATCCTGTCTCTCACTGGGCCTGTGAATCAGCAATaGCTGGTCCTCTTCCTTAACTGTGATCCCATAATTTTTGCTGTA +
Preference number: 5 (lower is better)
Translates to: HPMIILSLTGPVNQQ*LVLFLNCDPIIFAV
Trigger: TACAGCAAAAATTATGGGATCACAGTTAAGGAAGAGGACCAGCCATTGCTGATTCACAGGCCCAGTGAGAGACAGGATAATCATGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS-3UTR CAA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGGGCAACTGTCTTCAGTaGGCCATCAGACACTCCATC +
Preference number: 5 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLGNCLQ*AIRHSI
Trigger: GATGGAGTGTCTGATGGCCAACTGAAGACAGTTGCC...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS GCA 90 bp CTAAAAGTTTCATTACCCGACGGAAAACAACATTGTAGAAGGGAATaGACAGGTCAGAGCAGGGCTCCAGGATCTTTGTCATCTGAATCT +
Preference number: 5 (lower is better)
Translates to: LKVSLPDGKQHCRRE*TGQSRAPGSLSSES
Trigger: AGATTCAGATGACAAAGATCCTGGAGCCCTGCTCTGACCTGTGCATTCCCTTCTACAATGTTGTTTTCCGTCGGGTAATGAAACTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS-3UTR CAA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGAAGGTACAGGGAGGCTaGTCCACTTCTCTGCTGATA +
Preference number: 5 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLKVQGG*STSLLI
Trigger: TATCAGCAGAGAAGTGGACAAGCCTCCCTGTACCTT...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAACCAATGGTTCGAACATaGACAACCTGGGAGGGCACT +
Preference number: 5 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKPMVRT*TTWEGT
Trigger: AGTGCCCTCCCAGGTTGTCAATGTTCGAACCATTGG...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp GAGGATTTAGTCAGCAAGGGCCGACCTATGCCACAAACTGATTTTACTACACGCACTCACAGCTTGTTATaGTATGATCTACCACAGTTC +
Preference number: 5 (lower is better)
Translates to: EDLVSKGRPMPQTDFTTRTHSLL*YDLPQF
Trigger: GAACTGTGGTAGATCATACAATAACAAGCTGTGAGT...GCGTGTAGTAAAATCAGTTTGTGGCATAGGTCGGCCCTTGCTGACTAAATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS-3UTR CAA 90 bp TACTACACGCCTTGCACACCTGCCAGTAATAGCAATATCTACTTGAAAACTTTGCAGTACCACCGTAACTaGCTCTACACAGGCAACAAG +
Preference number: 5 (lower is better)
Translates to: YYTPCTPASNSNIYLKTLQYHRN*LYTGNK
Trigger: CTTGTTGCCTGTGTAGAGCAAGTTACGGTGGTACTG...CAAAGTTTTCAAGTAGATATTGCTATTACTGGCAGGTGTGCAAGGCGTGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS CCA 90 bp TCTCAAAAGCTTCAAAACACTTCTGTAGTTGAGGAATCTCATAGTTaGCAACTGTCTTCAGTTGGCCATCAGACACTCCATCACGGTACA +
Preference number: 5 (lower is better)
Translates to: SQKLQNTSVVEESHS*QLSSVGHQTLHHGT
Trigger: TGTACCGTGATGGAGTGTCTGATGGCCAACTGAAGACAGTTGCCAACTATGAGATTCCTCAACTACAGAAGTGTTTTGAAGCTTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000519884.1
ENST00000521356.5
ENST00000611073.1
CDS-3UTR CAA 90 bp GTGTCACGTTTTCCAAAGCTGACTTCTGGAAATCTTAACCTGGATTCAGAAAAATACATGTGGCACAGTTaGAAAGTCAGCCTCTGCATA +
Preference number: 5 (lower is better)
Translates to: VSRFPKLTSGNLNLDSEKYMWHS*KVSLCI
Trigger: TATGCAGAGGCTGACTTTCAAACTGTGCCACATGTA...TTTTTCTGAATCCAGGTTAAGATTTCCAGAAGTCAGCTTTGGAAAACGTGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356766.11
CDS CCA 90 bp CAAGAATGTGATCTCTTTCCCATCAGACATCGTGAAGCTATCCTTTaGAGTCTTATTCCAATCCACATCATCAATACGATAGGTACGATT +
Preference number: 5 (lower is better)
Translates to: QECDLFPIRHREAIL*SLIPIHIINTIGTI
Trigger: AATCGTACCTATCGTATTGATGATGTGGATTGGAATAAGACTCCAAAGGATAGCTTCACGATGTCTGATGGGAAAGAGATCACATTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS TCA 90 bp AAGTCACATGATATTGATAAACTGCTTCATTATGACACTGTATTTTaGCGAGGTTCAGTCCCAAAGACTGAGGTGTTCCTTTTGATCCTT +
Preference number: 5 (lower is better)
Translates to: KSHDIDKLLHYDTVF*RGSVPKTEVFLLIL
Trigger: AAGGATCAAAAGGAACACCTCAGTCTTTGGGACTGAACCTCGTCAAAATACAGTGTCATAATGAAGCAGTTTATCAATATCATGTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS GCA 72 bp GGTTCAATGGGGAGCGAACCCAGGACGGGCTGGGCCTaGCTCCCTCGCATCCCTGGGTGCGTGCTCCGCGCT +
Preference number: 6 (lower is better)
Translates to: GSMGSEPRTGWA*LPRIPGCVLRA
Trigger: AGCGCGGAGCACGCACCCAGGGATGCGAGGGAGGCAGGCCCAGCCCGTCCTGGGTTCGCTCCCCATTGAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CCA 72 bp GAAGCTTGTGGCCAACAGCCTGGCATCCGTACAGCCTaGCACTGGGATGGGTGGATAGGAGACTGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: EACGQQPGIRTA*HWDGWIGDWPL
Trigger: CAGGGGCCAGTCTCCTATCCACCCATCCCAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp TCTATCTCCTCTCTCAGGCCAAATAAGACGTCCACTTaGGCCTCCGGAGGGCCTCCCCTGCCGCCCCAACCT +
Preference number: 6 (lower is better)
Translates to: SISSLRPNKTST*ASGGPPLPPQP
Trigger: AGGTTGGGGCGGCAGGGGAGGCCCTCCGGAGGCCCAAGTGGACGTCTTATTTGGCCTGAGAGAGGAGATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CAA 90 bp TGCAGGTGCTCCCCTGCCCAGAGCTGGGTCCAAAGGTTTAGAAGCTaGTGGCCAACAGCCTGGCATCCGTACAGCCTGGCACTGGGATGG +
Preference number: 6 (lower is better)
Translates to: CRCSPAQSWVQRFRS*WPTAWHPYSLALGW
Trigger: CCATCCCAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTGGACCCAGCTCTGGGCAGGGGAGCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp TCAGGTAGCAGATACTTGGCTGTCCGAAAGGTTCAATaGGGAGCGAACCCAGGACGGGCTGGGCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SGSRYLAVRKVQ*GANPGRAGPAS
Trigger: GGAGGCAGGCCCAGCCCGTCCTGGGTTCGCTCCCCATTGAACCTTTCGGACAGCCAAGTATCTGCTACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS GCA 72 bp TGCTTGGTTCCTCTGGCTTTCCAAATACATGGCCTCTaGCTGCAGGTGCTCCCCTGCCCAGAGCTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: CLVPLAFQIHGL*LQVLPCPELGP
Trigger: TGGACCCAGCTCTGGGCAGGGGAGCACCTGCAGGCAGAGGCCATGTATTTGGAAAGCCAGAGGAACCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp CGTACAGCCTGGCACTGGGATGGGTGGATAGGAGACTaGCCCCTGAACGATGGTCGGAAAGGATCCATGGAC +
Preference number: 6 (lower is better)
Translates to: RTAWHWDGWIGD*PLNDGRKGSMD
Trigger: GTCCATGGATCCTTTCCGACCATCGTTCAGGGGCCAGTCTCCTATCCACCCATCCCAGTGCCAGGCTGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp CCTGCCCAGAGCTGGGTCCAAAGGTTTAGAAGCTTGTaGCCAACAGCCTGGCATCCGTACAGCCTGGCACTG +
Preference number: 6 (lower is better)
Translates to: PAQSWVQRFRSL*PTAWHPYSLAL
Trigger: CAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTGGACCCAGCTCTGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp ATTCAGGTAGCTCCCCCAGAGGGCCCTCTCCCAGTGTaGGTTTCCCCCTGGGATCAGGTAGCAGATACTTGG +
Preference number: 6 (lower is better)
Translates to: IQVAPPEGPLPV*VSPWDQVADTW
Trigger: CCAAGTATCTGCTACCTGATCCCAGGGGGAAACCCACACTGGGAGAGGGCCCTCTGGGGGAGCTACCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CAA 72 bp TCCCCTGCCCAGAGCTGGGTCCAAAGGTTTAGAAGCTaGTGGCCAACAGCCTGGCATCCGTACAGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: SPAQSWVQRFRS*WPTAWHPYSLA
Trigger: TGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTGGACCCAGCTCTGGGCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp CTGGGATGGGTGGATAGGAGACTGGCCCCTGAACGATaGTCGGAAAGGATCCATGGACGGGCTGTAGAGAAC +
Preference number: 6 (lower is better)
Translates to: LGWVDRRLAPER*SERIHGRAVEN
Trigger: GTTCTCTACAGCCCGTCCATGGATCCTTTCCGACCATCGTTCAGGGGCCAGTCTCCTATCCACCCATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS TCA 72 bp CCCACGAGGCATAGCTTCAGGCTGTCCACAATCTCCTaGTGCGGCATCTGGAACACCACCCGGGAATACCAT +
Preference number: 6 (lower is better)
Translates to: PTRHSFRLSTIS*CGIWNTTREYH
Trigger: ATGGTATTCCCGGGTGGTGTTCCAGATGCCGCATCAGGAGATTGTGGACAGCCTGAAGCTATGCCTCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS TCA 72 bp GACTCACAGAGCCCTCAGGCTACGGACCACAGTCAGTaGGAGGCCCACTCGCATTGTGTAGCCTGGAATCAT +
Preference number: 6 (lower is better)
Translates to: DSQSPQATDHSQ*EAHSHCVAWNH
Trigger: ATGATTCCAGGCTACACAATGCGAGTGGGCCTCTCACTGACTGTGGTCCGTAGCCTGAGGGCTCTGTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS GCA 72 bp GCGTCCTACTCCAACCAACGGAGGTCTCTGCCATCTTaGTGTCCCCAGCCGCCAACACTTTTGGATCCCAAA +
Preference number: 6 (lower is better)
Translates to: ASYSNQRRSLPS*CPQPPTLLDPK
Trigger: TTTGGGATCCAAAAGTGTTGGCGGCTGGGGACAGCAAGATGGCAGAGACCTCCGTTGGTTGGAGTAGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS GCA 72 bp TCTTCCAAGCGTCCTACTCCAACCAACGGAGGTCTCTaGCATCTTGCTGTCCCCAGCCGCCAACACTTTTGG +
Preference number: 6 (lower is better)
Translates to: SSKRPTPTNGGL*HLAVPSRQHFW
Trigger: CCAAAAGTGTTGGCGGCTGGGGACAGCAAGATGGCAGAGACCTCCGTTGGTTGGAGTAGGACGCTTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp TGGGTCCAAAGGTTTAGAAGCTTGTGGCCAACAGCCTaGCATCCGTACAGCCTGGCACTGGGATGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: WVQRFRSLWPTA*HPYSLALGWVD
Trigger: ATCCACCCATCCCAGTGCCAGGCTGTACGGATGCCAGGCTGTTGGCCACAAGCTTCTAAACCTTTGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp GTGTGGGTTTCCCCCTGGGATCAGGTAGCAGATACTTaGCTGTCCGAAAGGTTCAATGGGGAGCGAACCCAG +
Preference number: 6 (lower is better)
Translates to: VWVSPWDQVADT*LSERFNGERTQ
Trigger: CTGGGTTCGCTCCCCATTGAACCTTTCGGACAGCCAAGTATCTGCTACCTGATCCCAGGGGGAAACCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CAA 90 bp GAGCCCTCAGGCTACGGACCACAGTCAGTGAGAGGCCCACTCGCATaGTGTAGCCTGGAATCATGGCAGATCCTTTTGCAGTTAGTGCCA +
Preference number: 6 (lower is better)
Translates to: EPSGYGPQSVRGPLA*CSLESWQILLQLVP
Trigger: TGGCACTAACTGCAAAAGGATCTGCCATGATTCCAGGCTACACAATGCGAGTGGGCCTCTCACTGACTGTGGTCCGTAGCCTGAGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS TCA 72 bp AAAATCTTCTGGGCCACACTCCGAAGCCTGGTGGGCTaGCCAATGGTTCGAACATTGACAACCTGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: KIFWATLRSLVG*PMVRTLTTWEG
Trigger: GCCCTCCCAGGTTGTCAATGTTCGAACCATTGGTCAGCCCACCAGGCTTCGGAGTGTGGCCCAGAAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS GCA 72 bp CAGGAAGAGCCCTCCATCTGTCCTTCGGATGCTAGCTaGATAGCCTGGCCAGATCTGCAATCTGTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: QEEPSICPSDAS*IAWPDLQSVLL
Trigger: CAGCAACACAGATTGCAGATCTGGCCAGGCTATGCAGCTAGCATCCGAAGGACAGATGGAGGGCTCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp CTCAGAAGCGCTGGACGGCCTCCCTTAAGGGACATCTaGAATCTTCCTCTTTGTCCACGCTTCCCTCAACCT +
Preference number: 6 (lower is better)
Translates to: LRSAGRPPLRDI*NLPLCPRFPQP
Trigger: AGGTTGAGGGAAGCGTGGACAAAGAGGAAGATTCCAGATGTCCCTTAAGGGAGGCCGTCCAGCGCTTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CAA 72 bp AGTGTGGGTTTCCCCCTGGGATCAGGTAGCAGATACTaGGCTGTCCGAAAGGTTCAATGGGGAGCGAACCCA +
Preference number: 6 (lower is better)
Translates to: SVGFPLGSGSRY*AVRKVQWGANP
Trigger: TGGGTTCGCTCCCCATTGAACCTTTCGGACAGCCAAGTATCTGCTACCTGATCCCAGGGGGAAACCCACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454009.6
CDS CAA 72 bp GGCTACGGACCACAGTCAGTGAGAGGCCCACTCGCATaGTGTAGCCTGGAATCATGGCAGATCCTTTTGCAG +
Preference number: 6 (lower is better)
Translates to: GYGPQSVRGPLA*CSLESWQILLQ
Trigger: CTGCAAAAGGATCTGCCATGATTCCAGGCTACACAATGCGAGTGGGCCTCTCACTGACTGTGGTCCGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS TCA 72 bp GCATGCCAATGGGGCCGGCTATCTTCTCCAACATGTTaGCCAGTTCTCGAGCCTGGTCCATTGCTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: ACQWGRLSSPTC*PVLEPGPLLSL
Trigger: CAAAGAGAGCAATGGACCAGGCTCGAGAACTGGTCAACATGTTGGAGAAGATAGCCGGCCCCATTGGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp TTGCCACGAAGCCAACCACGGAGCGCATGCCTCTACTaGGGTCATGGTAAACATCCATCCCGATCACCATTA +
Preference number: 6 (lower is better)
Translates to: LPRSQPRSACLY*GHGKHPSRSPL
Trigger: TAATGGTGATCGGGATGGATGTTTACCATGACCCCAGTAGAGGCATGCGCTCCGTGGTTGGCTTCGTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp CGCATGCCAATGGGGCCGGCTATCTTCTCCAACATGTaGACCAGTTCTCGAGCCTGGTCCATTGCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: RMPMGPAIFSNM*TSSRAWSIALF
Trigger: AAAGAGAGCAATGGACCAGGCTCGAGAACTGGTCAACATGTTGGAGAAGATAGCCGGCCCCATTGGCATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp TTTGCAGACGGAGCCCCCAACGCATCAGTTCATTGGTaGCTGCCTCGTTCTTTGCAATTCTTTGCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: FADGAPNASVHW*LPRSLQFFAAS
Trigger: GCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGGGGGCTCCGTCTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp CCTTTTGCAGACGGAGCCCCCAACGCATCAGTTCATTaGTGGCTGCCTCGTTCTTTGCAATTCTTTGCAGCA +
Preference number: 6 (lower is better)
Translates to: PFADGAPNASVH*WLPRSLQFFAA
Trigger: TGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGGGGGCTCCGTCTGCAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp TCCTTTTGCAGACGGAGCCCCCAACGCATCAGTTCATaGGTGGCTGCCTCGTTCTTTGCAATTCTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: SFCRRSPQRISS*VAASFFAILCS
Trigger: GCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGGGGGCTCCGTCTGCAAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 90 bp GACGGAGCCCCCAACGCATCAGTTCATTGGTGGCTGCCTCGTTCTTaGCAATTCTTTGCAGCAAGCATTCCAAAGCACTATGGTGTTGCT +
Preference number: 6 (lower is better)
Translates to: DGAPNASVHWWLPRS*QFFAASIPKHYGVA
Trigger: AGCAACACCATAGTGCTTTGGAATGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGGGGGCTCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 90 bp AGAGGCCCACTCGCATTGTGTAGCCTGGAATCATGGCAGATCCTTTaGCAGTTAGTGCCAAAGCTACTGTGCCTAGAGGGCAGGGAAAAA +
Preference number: 6 (lower is better)
Translates to: RGPLALCSLESWQIL*QLVPKLLCLEGREK
Trigger: TTTTTCCCTGCCCTCTAGGCACAGTAGCTTTGGCACTAACTGCAAAAGGATCTGCCATGATTCCAGGCTACACAATGCGAGTGGGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS TCA 72 bp GATCCATCAAACGCAGTGACGTTGCCGGTGACAGCTTaGTGGTCCTTCAACATGCCGAACCTCATGCTTTTG +
Preference number: 6 (lower is better)
Translates to: DPSNAVTLPVTA*WSFNMPNLMLL
Trigger: CAAAAGCATGAGGTTCGGCATGTTGAAGGACCATCAAGCTGTCACCGGCAACGTCACTGCGTTTGATGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp GTGAGAGGCCCACTCGCATTGTGTAGCCTGGAATCATaGCAGATCCTTTTGCAGTTAGTGCCAAAGCTACTG +
Preference number: 6 (lower is better)
Translates to: VRGPLALCSLES*QILLQLVPKLL
Trigger: CAGTAGCTTTGGCACTAACTGCAAAAGGATCTGCCATGATTCCAGGCTACACAATGCGAGTGGGCCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS CAA 72 bp GGATCCCAAAAAGTGGGAGAGAGTTCCTCCCTGTCCTaGCGTACCAGATTAGCAGACAAGCCTCGACCTAAA +
Preference number: 6 (lower is better)
Translates to: GSQKVGESSSLS*RTRLADKPRPK
Trigger: TTTAGGTCGAGGCTTGTCTGCTAATCTGGTACGCAAGGACAGGGAGGAACTCTCTCCCACTTTTTGGGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp CTCGCATTGTGTAGCCTGGAATCATGGCAGATCCTTTaGCAGTTAGTGCCAAAGCTACTGTGCCTAGAGGGC +
Preference number: 6 (lower is better)
Translates to: LALCSLESWQIL*QLVPKLLCLEG
Trigger: GCCCTCTAGGCACAGTAGCTTTGGCACTAACTGCAAAAGGATCTGCCATGATTCCAGGCTACACAATGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519884.1
CDS CAA 90 bp CCAACGCATCAGTTCATTGGTGGCTGCCTCGTTCTTTGCAATTCTTaGCAGCAAGCATTCCAAAGCACTATGGTGTTGCTTGGGGCTCAG +
Preference number: 6 (lower is better)
Translates to: PTHQFIGGCLVLCNS*QQAFQSTMVLLGAQ
Trigger: CTGAGCCCCAAGCAACACCATAGTGCTTTGGAATGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS GCA 72 bp GGCAGAACACGTCCTTCAATCTTATGTACATCCTTTTaGAGACGGAGCCCCCAACGCATCAGTTCATTGGTG +
Preference number: 6 (lower is better)
Translates to: GRTRPSILCTSF*RRSPQRISSLV
Trigger: CACCAATGAACTGATGCGTTGGGGGCTCCGTCTGCAAAAGGATGTACATAAGATTGAAGGACGTGTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp CTTTTAGCAGCATCCCATGATTATCCTGTCTCTCACTaGGCCTGTGAATCAGCAATGGCTGGTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LLAASHDYPVSH*ACESAMAGPLP
Trigger: AGGAAGAGGACCAGCCATTGCTGATTCACAGGCCCAGTGAGAGACAGGATAATCATGGGATGCTGCTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp GGAACTCTGATGGTGCCAGGCCAATTCCAGTACATGTaGCACAGTTTGAAAGTCAGCCACTCACAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: GTLMVPGQFQYM*HSLKVSHSQLV
Trigger: AACAAGCTGTGAGTGGCTGACTTTCAAACTGTGCCACATGTACTGGAATTGGCCTGGCACCATCAGAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp AGATCCATCAAACGCAGTGACGTTGCCGGTGACAGCTaGATGGTCCTTCAACATGCCGAACCTCATGCTTTT +
Preference number: 6 (lower is better)
Translates to: RSIKRSDVAGDS*MVLQHAEPHAF
Trigger: AAAAGCATGAGGTTCGGCATGTTGAAGGACCATCAAGCTGTCACCGGCAACGTCACTGCGTTTGATGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 90 bp ATAGAGAATAGATCCATCAAACGCAGTGACGTTGCCGGTGACAGCTaGATGGTCCTTCAACATGCCGAACCTCATGCTTTTGCACTCCAC +
Preference number: 6 (lower is better)
Translates to: IENRSIKRSDVAGDS*MVLQHAEPHAFALH
Trigger: GTGGAGTGCAAAAGCATGAGGTTCGGCATGTTGAAGGACCATCAAGCTGTCACCGGCAACGTCACTGCGTTTGATGGATCTATTCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp GCACAGCTTCTTGATGGCCCCATAGAGATCATCACGTaGGCCCATGATGATGCAAACAACCATCTGTATCTT +
Preference number: 6 (lower is better)
Translates to: AQLLDGPIEIIT*AHDDANNHLYL
Trigger: AAGATACAGATGGTTGTTTGCATCATCATGGGCCCACGTGATGATCTCTATGGGGCCATCAAGAAGCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp TGGCAGAACACGTCCTTCAATCTTATGTACATCCTTTaGCAGACGGAGCCCCCAACGCATCAGTTCATTGGT +
Preference number: 6 (lower is better)
Translates to: WQNTSFNLMYIL*QTEPPTHQFIG
Trigger: ACCAATGAACTGATGCGTTGGGGGCTCCGTCTGCAAAAGGATGTACATAAGATTGAAGGACGTGTTCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS GCA 72 bp CCAACGCATCAGTTCATTGGTGGCTGCCTCGTTCTTTaGAATTCTTTGCAGCAAGCATTCCAAAGCACTATG +
Preference number: 6 (lower is better)
Translates to: PTHQFIGGCLVL*NSLQQAFQSTM
Trigger: CATAGTGCTTTGGAATGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp CCCAACGCATCAGTTCATTGGTGGCTGCCTCGTTCTTaGCAATTCTTTGCAGCAAGCATTCCAAAGCACTAT +
Preference number: 6 (lower is better)
Translates to: PNASVHWWLPRS*QFFAASIPKHY
Trigger: ATAGTGCTTTGGAATGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTGATGCGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS TCA 72 bp CACAGGTCAGAGCAGGGCTCCAGGATCTTTGTCATCTaGATCTTAATGCTGATTTCAGCACTGTCTGTTTTC +
Preference number: 6 (lower is better)
Translates to: HRSEQGSRIFVI*ILMLISALSVF
Trigger: GAAAACAGACAGTGCTGAAATCAGCATTAAGATTCAGATGACAAAGATCCTGGAGCCCTGCTCTGACCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp CAGTTCATTGGTGGCTGCCTCGTTCTTTGCAATTCTTaGCAGCAAGCATTCCAAAGCACTATGGTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: QFIGGCLVLCNS*QQAFQSTMVLL
Trigger: AAGCAACACCATAGTGCTTTGGAATGCTTGCTGCAAAGAATTGCAAAGAACGAGGCAGCCACCAATGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS CAA 72 bp AATTCTTTGCAGCAAGCATTCCAAAGCACTATGGTGTaGCTTGGGGCTCAGATTGATTTGCTGAGCCAAATC +
Preference number: 6 (lower is better)
Translates to: NSLQQAFQSTMV*LGAQIDLLSQI
Trigger: GATTTGGCTCAGCAAATCAATCTGAGCCCCAAGCAACACCATAGTGCTTTGGAATGCTTGCTGCAAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS TCA 72 bp TCTTCCCCTCAGCTCCTAACGTGGATTGAATGGTTCTaGCATAAGTCTCTATTCGGTCATCCTTTAGTTCAA +
Preference number: 6 (lower is better)
Translates to: SSPQLLTWIEWF*HKSLFGHPLVQ
Trigger: TTGAACTAAAGGATGACCGAATAGAGACTTATGTCAGAACCATTCAATCCACGTTAGGAGCTGAGGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1
CDS TCA 72 bp AGTTTGAAAGTCAGCCACTCACAGCTTGTTATTGTATaGTCTACCACAGTTCCAGGAGTGGGAGTTACAAAG +
Preference number: 6 (lower is better)
Translates to: SLKVSHSQLVIV*STTVPGVGVTK
Trigger: CTTTGTAACTCCCACTCCTGGAACTGTGGTAGATCATACAATAACAAGCTGTGAGTGGCTGACTTTCAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp CTTCAAAACACTTCTGTAGTTGAGGAATCTCATAGTTaGCAACTGTCTTCAGTTGGCCATCAGACACTCCAT +
Preference number: 6 (lower is better)
Translates to: LQNTSVVEESHS*QLSSVGHQTLH
Trigger: ATGGAGTGTCTGATGGCCAACTGAAGACAGTTGCCAACTATGAGATTCCTCAACTACAGAAGTGTTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000519884.1
ENST00000521356.5
ENST00000611073.1
CDS CCA 72 bp AGCTTGTTATTGTATGATCTACCACAGTTCCAGGAGTaGGAGTTACAAAGTTCTGAGGAGCAGCCAGATATA +
Preference number: 6 (lower is better)
Translates to: SLLLYDLPQFQE*ELQSSEEQPDI
Trigger: TATATCTGGCTGCTCCTCAGAACTTTGTAACTCCCACTCCTGGAACTGTGGTAGATCATACAATAACAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000519884.1
ENST00000521356.5
ENST00000611073.1
CDS TCA 72 bp GATATTGATAAACTGCTTCATTATGACACTGTATTTTaGCGAGGTTCAGTCCCAAAGACTGAGGTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: DIDKLLHYDTVF*RGSVPKTEVFL
Trigger: AAGGAACACCTCAGTCTTTGGGACTGAACCTCGTCAAAATACAGTGTCATAATGAAGCAGTTTATCAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356766.11
ENST00000454009.6
ENST00000521356.5
ENST00000611073.1