RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIWIL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000125207

Ensembl transcript IDs: ENST00000245255.7, ENST00000535956.5, ENST00000539400.5, ENST00000539995.5, ENST00000540672.2, ENST00000541480.1, ENST00000542723.1, ENST00000546060.5, ENST00000613226.2, ENST00000631528.1, ENST00000631714.1, ENST00000632888.1, ENST00000633042.1, ENST00000633252.1, ENST00000633272.1, ENST00000634077.1, ENST00000634115.1

Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp ATAGGTTATATAATAGTACCTTTTATCTTTAAGATATaGGCTGAAACCCCACCTATGGTTGTAGTGAGCATC +
Preference number: 3 (lower is better)
Translates to: IGYIIVPFIFKI*AETPPMVVVSI
Trigger: GATGCTCACTACAACCATAGGTGGGGTTTCAGCTCATATCTTAAAGATAAAAGGTACTATTATATAACCTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTTCCCGGGCGGATaGACACCGCCTCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLLFPGG*TPPPGR
Trigger: GCGCCCGGGAGGCGGTGTTCATCCGCCCGGGAAAAG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLRGPFL*LWLGLS
Trigger: GGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCCTCGCCTTCGGCGCTaGGTTCCCGAGAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLPRLRR*VPERAR
Trigger: CCTGGCTCTCTCGGGAACCCAGCGCCGAAGGCGAGG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACTTTTCCCGGGCGGATaGACACCGCCTCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLFPGG*TPPPGR
Trigger: GCGCCCGGGAGGCGGTGTTCATCCGCCCGGGAAAAG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACCTCGCCTTCGGCGCTaGGTTCCCGAGAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLPRLRR*VPERAR
Trigger: CCTGGCTCTCTCGGGAACCCAGCGCCGAAGGCGAGG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCGGGCCACCACACACTaGCTTGGGGTAGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLRATTH*LGVGQS
Trigger: AGATTGCCCTACCCCAAGTCAGTGTGTGGTGGCCCG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCCTAGTCCTGGTCCTTaGACCTCAGCCCGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLPSPGP*TSARGQ
Trigger: TTGGCCTCGGGCTGAGGTGCAAGGACCAGGACTAGG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATTCCCCCTCTGCTGGTaGCGGCTGAGGCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLFPLCW*RLRPRL
Trigger: CAGCCTAGGCCTCAGCCGCCACCAGCAGAGGGGGAA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCATCGCGGTACACGATaGTCCGGCTGGGCATGTACT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLHRGTR*SGWACT
Trigger: AGTACATGCCCAGCCGGATCATCGTGTACCGCGATG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGTTGCTGACTGGCAGTaGAGCCCACCAGCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLVADWQ*SPPAAL
Trigger: CAGCGCAGCTGGTGGGCTCCACTGCCAGTCAGCAAC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGCGCTGTATGTGGTCTaGCTTCAGGCCGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLALYVV*LQAAVV
Trigger: GACAACAGCGGCCTGAAGCCAGACCACATACAGCGC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGTCAAGCGCTGTATGTaGTCTGGCTTCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLVKRCM*SGFRPL
Trigger: CAGCGGCCTGAAGCCAGACCACATACAGCGCTTGAC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCAGGCTGGAGTGCAGTaGCGTGATCTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLQAGVQ*RDLCSL
Trigger: CAGTGAGCAGAGATCACGCCACTGCACTCCAGCCTG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTGAAATATGCAGCGTaGGAACCAGCGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLLKYAA*EPAGHP
Trigger: GGGATGACCCGCTGGTTCTCACGCTGCATATTTCAG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTGCAGGCAGACTTTaGGCCCATCTACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLLAGRL*AHLPAP
Trigger: AGGAGCTGGTAGATGGGCTCAAAGTCTGCCTGCAAG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTATTTCTTGGACCGCTaGCCTCGCCCTAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLYFLDR*PRPSPG
Trigger: ACCAGGACTAGGGCGAGGGCAGCGGTCCAAGAAATA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCACCAGTGTTTTCAGCTaGCCGTCTCCTACGCCATCG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLTSVFS*PSPTPS
Trigger: CGATGGCGTAGGAGACGGCCAGCTGAAAACACTGGT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCCTGCCTCAGCCTCCTaGCACCACATCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLPASAS*HHIWLI
Trigger: AATTAGCCAGATGTGGTGCCAGGAGGCTGAGGCAGG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACTTGGCTGTTCCTCCTaGTGTTCCTCTCTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLGCSS*CSSLPS
Trigger: GGACGGCAGAGAGGAACAGCAGGAGGAACAGCCAAG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATTGCCCAGGCTGGAGTaGAGTGGCGTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLPRLE*SGVISA
Trigger: AGCAGAGATCACGCCACTGCACTCCAGCCTGGGCAA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRGPFL*LWLGLS
Trigger: GGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACAGGCTGGAGTGCAGTaGCGTGATCTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLQAGVQ*RDLCSL
Trigger: CAGTGAGCAGAGATCACGCCACTGCACTCCAGCCTG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACAGCTGCGCTGTCTCCTaGCCGCGGGCCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNSCAVS*PRALPL
Trigger: CAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATTCTCTTGGGCTGGCTaGCCAAGACAGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLFSWAG*PRQAAS
Trigger: TGAAGCAGCCTGTCTTGGTCAGCCAGCCCAAGAGAA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTCTGGGTGTCTGCTGTaGCCTTTTGCTGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLSGCLL*PFAVRL
Trigger: GAGTCTTACAGCAAAAGGTCACAGCAGACACCCAGA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACTGAAATATGCAGCGTaGGAACCAGCGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLKYAA*EPAGHP
Trigger: GGGATGACCCGCTGGTTCTCACGCTGCATATTTCAG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATATTTCTTGGACCGCTaGCCTCGCCCTAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLYFLDR*PRPSPG
Trigger: ACCAGGACTAGGGCGAGGGCAGCGGTCCAAGAAATA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTCTATCCTGAAATATaGAGCGTGAGAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLLYPEI*SVRTSG
Trigger: CCCGCTGGTTCTCACGCTGCATATTTCAGGATAGAG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCACCACACACTGACTTaGGGTAGGGCAATCTGTACA +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLHHTLT*GRAICT
Trigger: TGTACAGATTGCCCTACCCCAAGTCAGTGTGTGGTG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACCTGCCTCAGCCTCCTaGCACCACATCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLPASAS*HHIWLI
Trigger: AATTAGCCAGATGTGGTGCCAGGAGGCTGAGGCAGG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATATCTGGAGTCCTTGTaGCTTGGCTGTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLYLESL*LGCSSC
Trigger: GCAGGAGGAACAGCCAAGTCACAAGGACTCCAGATA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCAGTATTCTAAGAAGCTaGCTTCAGAGCCGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLSILRS*LQSRRL
Trigger: AAGCCGACGGCTCTGAAGTCAGCTTCTTAGAATACT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGCTGCTTCAAGTCGGTaGTCTCTTGGTTGTATTGCT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLAASSR*SLGCIA
Trigger: AGCAATACAACCAAGAGATCACCGACTTGAAGCAGC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTCCTGTCCTCTATCCTaGAATATGCAGCGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLSCPLS*NMQREN
Trigger: GTTCTCACGCTGCATATTTCAGGATAGAGGACAGGA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACCTGCTGTTCCTCTCTaGCGTCCACGGCCAAATAAT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLPAVPL*RPRPNN
Trigger: ATTATTTGGCCGTGGACGGCAGAGAGGAACAGCAGG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACGTCCCACTTCACGCTaGCTTTGCTCTGGAGTTAGT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLRPTSR*LCSGVS
Trigger: ACTAACTCCAGAGCAAAGGCAGCGTGAAGTGGGACG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTTGTTTTCTATTTCTTaGACCGCTGCCCTCGCCCTA +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLLFSIS*TAALAL
Trigger: TAGGGCGAGGGCAGCGGTCCAAGAAATAGAAAACAA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTTCCCCCTCTGCTGGTaGCGGCTGAGGCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNFPLCW*RLRPRL
Trigger: CAGCCTAGGCCTCAGCCGCCACCAGCAGAGGGGGAA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGGAGTCCTTGTGACTTaGCTGTTCCTCCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLGVLVT*LFLLLF
Trigger: GAACAGCAGGAGGAACAGCCAAGTCACAAGGACTCC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTCGAAGGACTTTATaGCTAACGTCAGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLLRRTL*LTSVQS
Trigger: GCTCTGCACTGACGTTAGCCATAAAGTCCTTCGAAG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTTGAAAAAGAAGAGCTaGACGGAGTCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLLKKKS*TESSGF
Trigger: GAAGCCAGAAGACTCCGTTCAGCTCTTCTTTTTCAA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGGGTCATCCCTTCATTaGTGCTGGCAACAAATCCTG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLGSSLH*CWQQIL
Trigger: CAGGATTTGTTGCCAGCATCAATGAAGGGATGACCC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCAGATTTGGCTCTCTGTaGATACTCTGGCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLRFGSL*ILWPTR
Trigger: TCTTGTTGGCCAGAGTATTCACAGAGAGCCAAATCT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACTGACCAAGACAGGCTaGTTCAAGTCGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLTKTG*FKSVIS
Trigger: AGAGATCACCGACTTGAAGCAGCCTGTCTTGGTCAG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCACTTCACGCTGCCTTTaGTCTGGAGTTAGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLTSRCL*SGVSLV
Trigger: TACAAGACTAACTCCAGAGCAAAGGCAGCGTGAAGT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCATGGTAACAATCGATaGCAACGATCATCACGAGCT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLHGNNR*QRSSRA
Trigger: AGCTCGTGATGATCGTTGGCATCGATTGTTACCATG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCCCTTCCTCTGGCTCTaGCTCGGGCTCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNPFLWL*LGLSQS
Trigger: TGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACACCACACACTGACTTaGGGTAGGGCAATCTGTACA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLHHTLT*GRAICT
Trigger: TGTACAGATTGCCCTACCCCAAGTCAGTGTGTGGTG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTTCACACCAAGATCATaGAAATCTCTACGACGACCT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLFTPRS*KSLRRP
Trigger: AGGTCGTCGTAGAGATTTTCATGATCTTGGTGTGAA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAAGTATTCTAAGAAGCTaGCTTCAGAGCCGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLSILRS*LQSRRL
Trigger: AAGCCGACGGCTCTGAAGTCAGCTTCTTAGAATACT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGGAGTTAGTCTTGTATaGACGGCTAAGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLGVSLV*TAKSFI
Trigger: GATGAAAGACTTAGCCGTTCATACAAGACTAACTCC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGTCCTTCCGATTACTTaGCAACAGACAGACAACTAT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLVLPIT*QQTDNY
Trigger: ATAGTTGTCTGTCTGTTGTCAAGTAATCGGAAGGAC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCGGGCCACCACACACTaGCTTGGGGTAGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRATTH*LGVGQS
Trigger: AGATTGCCCTACCCCAAGTCAGTGTGTGGTGGCCCG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCATTGCTTTTCTCATTTaGATGCCCATGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLIAFLI*MPMAGV
Trigger: TACACCAGCCATGGGCATGCAAATGAGAAAAGCAAT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATTGTTTTCTATTTCTTaGACCGCTGCCCTCGCCCTA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLFSIS*TAALAL
Trigger: TAGGGCGAGGGCAGCGGTCCAAGAAATAGAAAACAA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGATGTCAGCCGGAAATaGTTAGTGCTTAACCTTACT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLDVSRK*LVLNLT
Trigger: AGTAAGGTTAAGCACTAACCATTTCCGGCTGACATC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACTTCGAAGGACTTTATaGCTAACGTCAGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLRRTL*LTSVQS
Trigger: GCTCTGCACTGACGTTAGCCATAAAGTCCTTCGAAG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCGCCTTCTCTTGGGCTaGCTGACCAAGACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRLLLG*LTKTGC
Trigger: GCAGCCTGTCTTGGTCAGCCAGCCCAAGAGAAGGCG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCACAATCCAAAAACTGTaGCACTTCGTAGTTCACCAG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLTIQKL*HFVVHQ
Trigger: CTGGTGAACTACGAAGTGCCACAGTTTTTGGATTGT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCAACACGAATGACACCTaGCCAGTTGTAATAGATGTG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLNTNDT*PVVIDV
Trigger: CACATCTATTACAACTGGCCAGGTGTCATTCGTGTT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGCTAACGATAACTCCTaGAATCCAGCAGATATCTGG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLANDNS*NPADIW
Trigger: CCAGATATCTGCTGGATTTCAGGAGTTATCGTTAGC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATTGAAAAAGAAGAGCTaGACGGAGTCTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLKKKS*TESSGF
Trigger: GAAGCCAGAAGACTCCGTTCAGCTCTTCTTTTTCAA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACGTCAGTGCAGAGCATaGTGCTGTTTTCATACTGAA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLRQCRA*CCFHTE
Trigger: TTCAGTATGAAAACAGCATCATGCTCTGCACTGACG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAACTTCACGCTGCCTTTaGTCTGGAGTTAGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLTSRCL*SGVSLV
Trigger: TACAAGACTAACTCCAGAGCAAAGGCAGCGTGAAGT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTTGCCCAGGCTGGAGTaGAGTGGCGTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNLPRLE*SGVISA
Trigger: AGCAGAGATCACGCCACTGCACTCCAGCCTGGGCAA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACAACCAGGTTGCTGACTaGCAGTGGAGCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNNQVAD*QWSPPA
Trigger: AGCTGGTGGGCTCCACTGCCAGTCAGCAACCTGGTT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAAATCCAGCAGATATCTaGAGTCCTTGTGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLNPADI*SPCDLA
Trigger: AGCCAAGTCACAAGGACTCCAGATATCTGCTGGATT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCACCAACCTGTGACTTaGAATATCAATTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLHQPVT*NINWVI
Trigger: AATGACCCAATTGATATTCCAAGTCACAGGTTGGTG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGCGCTGTATGTGGTCTaGCTTCAGGCCGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNALYVV*LQAAVV
Trigger: GACAACAGCGGCCTGAAGCCAGACCACATACAGCGC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATTCACACCAAGATCATaGAAATCTCTACGACGACCT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLFTPRS*KSLRRP
Trigger: AGGTCGTCGTAGAGATTTTCATGATCTTGGTGTGAA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACTGCAAACAAGTTGGTaGTGTAGGTGGAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLQTSW*CRWKFI
Trigger: AATGAACTTCCACCTACATCACCAACTTGTTTGCAG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTACAAATCACCAACCTGTaGCTTGGAATATCAATTGGG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLQITNL*LGISIG
Trigger: CCCAATTGATATTCCAAGTCACAGGTTGGTGATTTG...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTTCTCTTGGGCTGGCTaGCCAAGACAGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNFSWAG*PRQAAS
Trigger: TGAAGCAGCCTGTCTTGGTCAGCCAGCCCAAGAGAA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATATGAATGTAATCAATaGGTCGTCCCACTTCACGCT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLYECNQ*VVPLHA
Trigger: AGCGTGAAGTGGGACGACTCATTGATTACATTCATA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTTTATCTTTAAGATATaGGCTGAAACCCCACCTATG +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLFIFKI*AETPPM
Trigger: CATAGGTGGGGTTTCAGCTCATATCTTAAAGATAAA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAACATGGTCTAGGTTCTaGCTTGTATTCACACCAAGA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLTWSRF*LVFTPR
Trigger: TCTTGGTGTGAATACAAGGCAGAACCTAGACCATGT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAATTGCTTTTCTCATTTaGATGCCCATGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLIAFLI*MPMAGV
Trigger: TACACCAGCCATGGGCATGCAAATGAGAAAAGCAAT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAAAAAAGAAAAGCGGCTaGATCGTCTTCTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLKKKSG*IVFCRL
Trigger: TAACCTGCAGAAGACGATGCAGCCGCTTTTCTTTTT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTTTATAAGTAGGACTTaGTCACTCCTGAAAGTACGT +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLFISRT*SLLKVR
Trigger: ACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAAGAAGGACAGTAAGTTaGAATCAAAGCTCAAACCCC +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLRRTVS*NQSSNP
Trigger: GGGGTTTGAGCTTTGATTCCAACTTACTGTCCTTCT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACACCAGTGTTTTCAGCTaGCCGTCTCCTACGCCATCG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNTSVFS*PSPTPS
Trigger: CGATGGCGTAGGAGACGGCCAGCTGAAAACACTGGT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAACAATCCAAAAACTGTaGCACTTCGTAGTTCACCAG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLTIQKL*HFVVHQ
Trigger: CTGGTGAACTACGAAGTGCCACAGTTTTTGGATTGT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAAACACGAATGACACCTaGCCAGTTGTAATAGATGTG +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLNTNDT*PVVIDV
Trigger: CACATCTATTACAACTGGCCAGGTGTCATTCGTGTT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTATCTGGAGTCCTTGTaGCTTGGCTGTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNYLESL*LGCSSC
Trigger: GCAGGAGGAACAGCCAAGTCACAAGGACTCCAGATA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCCTGCTGTTCCTCTCTaGCGTCCACGGCCAAATAAT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNPAVPL*RPRPNN
Trigger: ATTATTTGGCCGTGGACGGCAGAGAGGAACAGCAGG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCGTCCCACTTCACGCTaGCTTTGCTCTGGAGTTAGT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRPTSR*LCSGVS
Trigger: ACTAACTCCAGAGCAAAGGCAGCGTGAAGTGGGACG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGGAGTCCTTGTGACTTaGCTGTTCCTCCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNGVLVT*LFLLLF
Trigger: GAACAGCAGGAGGAACAGCCAAGTCACAAGGACTCC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTTTGATTCTTTAACATaGTCTAGGTTCTGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: AETPPMVVVSILLYASYLFDSLT*SRFCLV
Trigger: TACAAGGCAGAACCTAGACCATGTTAAAGAATCAAA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATCTGGCTTCCATCAGTaGGTTATAGTCAATGTGATA +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLSGFHQ*VIVNVI
Trigger: TATCACATTGACTATAACCCACTGATGGAAGCCAGA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGTTCATTTGTTAAAGTaGTCGTTATCCTCACATCCT +
Preference number: 4 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLVHLLK*SLSSHP
Trigger: AGGATGTGAGGATAACGATCACTTTAACAAATGAAC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTCTGGGTGTCTGCTGTaGCCTTTTGCTGTAAGACTC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNSGCLL*PFAVRL
Trigger: GAGTCTTACAGCAAAAGGTCACAGCAGACACCCAGA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGGGTCATCCCTTCATTaGTGCTGGCAACAAATCCTG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNGSSLH*CWQQIL
Trigger: CAGGATTTGTTGCCAGCATCAATGAAGGGATGACCC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCTCTATCCTGAAATATaGAGCGTGAGAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNLYPEI*SVRTSG
Trigger: CCCGCTGGTTCTCACGCTGCATATTTCAGGATAGAG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGCTGCTTCAAGTCGGTaGTCTCTTGGTTGTATTGCT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNAASSR*SLGCIA
Trigger: AGCAATACAACCAAGAGATCACCGACTTGAAGCAGC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTCCTGTCCTCTATCCTaGAATATGCAGCGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNSCPLS*NMQREN
Trigger: GTTCTCACGCTGCATATTTCAGGATAGAGGACAGGA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACATGGCCATGACAGTTTaGTGTTTGCCTAAGGTTCGG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNMAMTV*CLPKVR
Trigger: CCGAACCTTAGGCAAACAGCAAACTGTCATGGCCAT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCGTCAGTGCAGAGCATaGTGCTGTTTTCATACTGAA +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRQCRA*CCFHTE
Trigger: TTCAGTATGAAAACAGCATCATGCTCTGCACTGACG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCGCTGTTGTCATAGATaGCATTGTAATGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRCCHR*HCNVWE
Trigger: CTCCCACACATTACAATGTCATCTATGACAACAGCG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACAGATTTGGCTCTCTGTaGATACTCTGGCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRFGSL*ILWPTR
Trigger: TCTTGTTGGCCAGAGTATTCACAGAGAGCCAAATCT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCATGGTAACAATCGATaGCAACGATCATCACGAGCT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNHGNNR*QRSSRA
Trigger: AGCTCGTGATGATCGTTGGCATCGATTGTTACCATG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACAATCCAGCAGATATCTaGAGTCCTTGTGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNNPADI*SPCDLA
Trigger: AGCCAAGTCACAAGGACTCCAGATATCTGCTGGATT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCTGCAAACAAGTTGGTaGTGTAGGTGGAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNLQTSW*CRWKFI
Trigger: AATGAACTTCCACCTACATCACCAACTTGTTTGCAG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGGAGTTAGTCTTGTATaGACGGCTAAGTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNGVSLV*TAKSFI
Trigger: GATGAAAGACTTAGCCGTTCATACAAGACTAACTCC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACACATGGTCTAGGTTCTaGCTTGTATTCACACCAAGA +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNTWSRF*LVFTPR
Trigger: TCTTGGTGTGAATACAAGGCAGAACCTAGACCATGT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACAAAAAGAAAAGCGGCTaGATCGTCTTCTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNKKKSG*IVFCRL
Trigger: TAACCTGCAGAAGACGATGCAGCCGCTTTTCTTTTT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGATGTCAGCCGGAAATaGTTAGTGCTTAACCTTACT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNDVSRK*LVLNLT
Trigger: AGTAAGGTTAAGCACTAACCATTTCCGGCTGACATC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACAGAAGGACAGTAAGTTaGAATCAAAGCTCAAACCCC +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNRRTVS*NQSSNP
Trigger: GGGGTTTGAGCTTTGATTCCAACTTACTGTCCTTCT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCACCAACCTGTGACTTaGAATATCAATTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNHQPVT*NINWVI
Trigger: AATGACCCAATTGATATTCCAAGTCACAGGTTGGTG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCACCTCTTGTTTCTTTaGACCAATCTGCAAATTGTG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNHLLFL*TNLQIV
Trigger: CACAATTTGCAGATTGGTCCAAAGAAACAAGAGGTG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGTTCATTTGTTAAAGTaGTCGTTATCCTCACATCCT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNVHLLK*SLSSHP
Trigger: AGGATGTGAGGATAACGATCACTTTAACAAATGAAC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR TCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTTTATCTTTAAGATATaGGCTGAAACCCCACCTATG +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNFIFKI*AETPPM
Trigger: CATAGGTGGGGTTTCAGCTCATATCTTAAAGATAAA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR GCA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTTTATAAGTAGGACTTaGTCACTCCTGAAAGTACGT +
Preference number: 4 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNFISRT*SLLKVR
Trigger: ACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 90 bp GGGACACGCGGGCAGCGAGCAACAGGCGCTCTTTTCCCGGGCGGATaGACACCGCCTCCCGGGCGCCGGCCTCGTGTCTGTACGCCATAC +
Preference number: 5 (lower is better)
Translates to: GTRGQRATGALFPGG*TPPPGRRPRVCTPY
Trigger: GTATGGCGTACAGACACGAGGCCGGCGCCCGGGAGGCGGTGTTCATCCGCCCGGGAAAAGAGCGCCTGTTGCTCGCTGCCCGCGTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS GCA 90 bp GTTTTCTATTTCTTGGACCGCTGCCCTCGCCCTAGTCCTGGTCCTTaGACCTCAGCCCGAGGCCAACAGCCCCAACGGCTCCCGCGGAGA +
Preference number: 5 (lower is better)
Translates to: VFYFLDRCPRPSPGP*TSARGQQPQRLPRR
Trigger: TCTCCGCGGGAGCCGTTGGGGCTGTTGGCCTCGGGCTGAGGTGCAAGGACCAGGACTAGGGCGAGGGCAGCGGTCCAAGAAATAGAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS CCA 90 bp TGGAGCCCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: WSPPAALSPDRGPFL*LWLGLSQSLFSISG
Trigger: CCCAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535956.5
ENST00000634115.1
CDS CCA 90 bp CCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTGGCTCTaGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTTGGACCGCT +
Preference number: 5 (lower is better)
Translates to: PPAALSPDRGPFLWL*LGLSQSLFSISWTA
Trigger: AGCGGTCCAAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS CCA 90 bp TGGAGCCCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTTGG +
Preference number: 5 (lower is better)
Translates to: WSPPAALSPDRGPFL*LWLGLSQSLFSISW
Trigger: CCAAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS CCA 90 bp CCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTGGCTCTaGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTCCACATCCC +
Preference number: 5 (lower is better)
Translates to: PPAALSPDRGPFLWL*LGLSQSLFSISPHP
Trigger: GGGATGTGGAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539400.5
ENST00000633272.1
CDS CCA 90 bp TGGAGCCCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: WSPPAALSPDRGPFL*LWLGLSQSLFSISP
Trigger: TGGAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539400.5
ENST00000633272.1
CDS CCA 90 bp TGGAGCCCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: WSPPAALSPDRGPFL*LWLGLSQSLFSISL
Trigger: GAGAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539995.5
ENST00000633252.1
CDS CCA 90 bp TGGAGCCCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTGGA +
Preference number: 5 (lower is better)
Translates to: WSPPAALSPDRGPFL*LWLGLSQSLFSISG
Trigger: TCCAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542723.1
ENST00000633042.1
CDS CCA 90 bp TGGAGCCCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTaGCTCTGGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTAGC +
Preference number: 5 (lower is better)
Translates to: WSPPAALSPDRGPFL*LWLGLSQSLFSISS
Trigger: GCTAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546060.5
ENST00000634077.1
CDS CCA 90 bp CCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTGGCTCTaGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTCTCCGATTC +
Preference number: 5 (lower is better)
Translates to: PPAALSPDRGPFLWL*LGLSQSLFSISLRF
Trigger: GAATCGGAGAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539995.5
ENST00000633252.1
CDS CCA 90 bp CCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTGGCTCTaGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: PPAALSPDRGPFLWL*LGLSQSLFSISGEE
Trigger: TTCCTCTCCAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542723.1
ENST00000633042.1
CDS CCA 90 bp CCACCAGCTGCGCTGTCTCCTGACCGCGGGCCCTTCCTCTGGCTCTaGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCTAGCACCTCA +
Preference number: 5 (lower is better)
Translates to: PPAALSPDRGPFLWL*LGLSQSLFSISSTS
Trigger: TGAGGTGCTAGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546060.5
ENST00000634077.1
CDS GCA 90 bp CTGCGATTGACCTCCGCCCAGCTGTCATGTCATGGTAACAATCGATaGCAACGATCATCACGAGCTTCAGGGGGATGTCCACCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LRLTSAQLSCHGNNR*QRSSRASGGCPPSR
Trigger: TCTGGAGGGTGGACATCCCCCTGAAGCTCGTGATGATCGTTGGCATCGATTGTTACCATGACATGACAGCTGGGCGGAGGTCAATCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCAGCCCTCAGAGCCGCTaGCAGGCAGACTTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLSPQSR*QADFEP
Trigger: GGGCTCAAAGTCTGCCTGCAAGCGGCTCTGAGGGCT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 90 bp TGCAGGCAGACTTTGAGCCCATCTACCAGCTCCTGTCCTCTATCCTaGAATATGCAGCGTGAGAACCAGCGGGTCATCCCTTCATTGATG +
Preference number: 5 (lower is better)
Translates to: CRQTLSPSTSSCPLS*NMQRENQRVIPSLM
Trigger: CATCAATGAAGGGATGACCCGCTGGTTCTCACGCTGCATATTTCAGGATAGAGGACAGGAGCTGGTAGATGGGCTCAAAGTCTGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAAGCCCTCAGAGCCGCTaGCAGGCAGACTTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLSPQSR*QADFEP
Trigger: GGGCTCAAAGTCTGCCTGCAAGCGGCTCTGAGGGCT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 90 bp TGTCCTGGGCAATTGCAGATGCACCCTTTCAAGAGATGTGCACCTTaGATCAAGAGATCAAGCCAACTGGACTGTGGTGCAAGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: CPGQLQMHPFKRCAP*IKRSSQLDCGARVQ
Trigger: CTGCACTCTTGCACCACAGTCCAGTTGGCTTGATCTCTTGATTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTGCCCAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTGAATATAACCAGGTaGCTGACTGGCAGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLLNITR*LTGSGA
Trigger: GGCTCCACTGCCAGTCAGCAACCTGGTTATATTCAG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 90 bp TCAAGCGCTGTATGTGGTCTGGCTTCAGGCCGCTGTTGTCATAGATaGCATTGTAATGTGTGGGAGAAACACTACCACTTCTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: SSAVCGLASGRCCHR*HCNVWEKHYHFSQP
Trigger: AGGCTGTGAGAAGTGGTAGTGTTTCTCCCACACATTACAATGTCATCTATGACAACAGCGGCCTGAAGCCAGACCACATACAGCGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245255.7
ENST00000541480.1
ENST00000613226.2
ENST00000631714.1
ENST00000632888.1
CDS GCA 90 bp TTGTCACTGTCCTGGGCAATTGCAGATGCACCCTTTCAAGAGATGTaGACCTTGAATCAAGAGATCAAGCCAACTGGACTGTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: LSLSWAIADAPFQEM*TLNQEIKPTGLWCK
Trigger: CTTGCACCACAGTCCAGTTGGCTTGATCTCTTGATTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTGCCCAGGACAGTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS CCA 90 bp ACCCTTTCAAGAGATGTGCACCTTGAATCAAGAGATCAAGCCAACTaGACTGTGGTGCAAGAGTGCAGGAGCATATGTTTGCTGACTGGG +
Preference number: 5 (lower is better)
Translates to: TLSRDVHLESRDQAN*TVVQECRSICLLTG
Trigger: CCCAGTCAGCAAACATATGCTCCTGCACTCTTGCACCACAGTCCAGTTGGCTTGATCTCTTGATTCAAGGTGCACATCTCTTGAAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS CCA 90 bp CTTAAAGTCAGAAAGCAAGTGTGTGCTTCCAATAACCACACTCGCTaGAAATCACCTCTCCGATTCGCTACCAGCTCTGCCAAAGACGCT +
Preference number: 5 (lower is better)
Translates to: LKVRKQVCASNNHTR*KSPLRFATSSAKDA
Trigger: AGCGTCTTTGGCAGAGCTGGTAGCGAATCGGAGAGGTGATTTCCAGCGAGTGTGGTTATTGGAAGCACACACTTGCTTTCTGACTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535956.5
ENST00000634115.1
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCATTGTTTTCTATTTCTaGGACCGCTGCCCTCGCCCT +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLIVFYF*DRCPRP
Trigger: AGGGCGAGGGCAGCGGTCCAAGAAATAGAAAACAAT...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGGGCTCTCCCAGTCATaGTTTTCTATTTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLGLSQS*FSISWT
Trigger: GGTCCAAGAAATAGAAAACAATGACTGGGAGAGCCC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATGGAGTCCTTGTGACTaGGCTGTTCCTCCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLWSPCD*AVPPAV
Trigger: AACAGCAGGAGGAACAGCCAAGTCACAAGGACTCCA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAATGACAGTTTGCTGTTaGCCTAAGGTTCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLMTVCC*PKVRAT
Trigger: GGTGGCCCGAACCTTAGGCAAACAGCAAACTGTCAT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAACAAGAAAAGCCAGCTaGTGGGCGTACTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLTRKAS*WAYWQG
Trigger: TCCTTGCCAGTACGCCCACAAGCTGGCTTTTCTTGT...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGGTAGTAAAGGCGGTTaGACAGTGACAGATTTGGCT +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLGSKGG*TVTDLA
Trigger: AGCCAAATCTGTCACTGTCAAACCGCCTTTACTACC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGGTCTAGGTTCTGCCTaGTATTCACACCAAGATCAT +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLGLGSA*YSHQDH
Trigger: ATGATCTTGGTGTGAATACAAGGCAGAACCTAGACC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCAAGTCGGTGATCTCTaGGTTGTATTGCTTCCTGTA +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLQVGDL*VVLLPV
Trigger: TACAGGAAGCAATACAACCAAGAGATCACCGACTTG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGCTCTGGAGTTAGTCTaGTATGAACGGCTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLALELV*YERLSL
Trigger: AAGACTTAGCCGTTCATACAAGACTAACTCCAGAGC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGGGCTCTCCCAGTCATaGTTTTCTATTTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLGLSQS*FSISWT
Trigger: GGTCCAAGAAATAGAAAACAATGACTGGGAGAGCCC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGCACCTCTTGTTTCTTaGGACCAATCTGCAAATTGT +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLAPLVS*DQSANC
Trigger: ACAATTTGCAGATTGGTCCAAAGAAACAAGAGGTGC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTTAATGGTGCACCTCTaGTTTCTTTGGACCAATCTG +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLLMVHL*FLWTNL
Trigger: CAGATTGGTCCAAAGAAACAAGAGGTGCACCATTAA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCTGTCCTTCCGATTACTaGACAACAGACAGACAACTA +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLCPSDY*TTDRQL
Trigger: TAGTTGTCTGTCTGTTGTCAAGTAATCGGAAGGACA...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGCTCTGGAGTTAGTCTaGTATGAACGGCTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLALELV*YERLSL
Trigger: AAGACTTAGCCGTTCATACAAGACTAACTCCAGAGC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCGTCTCGAAGCTCCCTTaGAACATTATCGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLVSKLP*NIIVFM
Trigger: CATAAAAACGATAATGTTCAAAGGGAGCTTCGAGAC...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGCTTGCAGGCAGACTTaGAGCCCATCTACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNACRQT*SPSTSS
Trigger: GGAGCTGGTAGATGGGCTCAAAGTCTGCCTGCAAGC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 90 bp TCTTTAACATGGTCTAGGTTCTGCCTTGTATTCACACCAAGATCATaGAAATCTCTACGACGACCTCCTCTCTCTGCTAACGATAACTCC +
Preference number: 5 (lower is better)
Translates to: SLTWSRFCLVFTPRS*KSLRRPPLSANDNS
Trigger: GGAGTTATCGTTAGCAGAGAGAGGAGGTCGTCGTAGAGATTTTCATGATCTTGGTGTGAATACAAGGCAGAACCTAGACCATGTTAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000245255.7
ENST00000535956.5
ENST00000539400.5
ENST00000539995.5
ENST00000540672.2
ENST00000542723.1
ENST00000546060.5
ENST00000613226.2
ENST00000631528.1
ENST00000632888.1
ENST00000633042.1
ENST00000633252.1
ENST00000633272.1
ENST00000634077.1
ENST00000634115.1
CDS CCA 90 bp GGTTTCCTAGTTATAACTTCATTCATAAAGGCCTTGTCACTGTCCTaGGCAATTGCAGATGCACCCTTTCAAGAGATGTGCACCTTGAAT +
Preference number: 5 (lower is better)
Translates to: GFLVITSFIKALSLS*AIADAPFQEMCTLN
Trigger: ATTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTGCCCAGGACAGTGACAAGGCCTTTATGAATGAAGTTATAACTAGGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATTAATGGTGCACCTCTaGTTTCTTTGGACCAATCTG +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLLMVHL*FLWTNL
Trigger: CAGATTGGTCCAAAGAAACAAGAGGTGCACCATTAA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp GCTGAAACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCCACTTCAATCATTATaGCTTTTCTCATTTGCATGC +
Preference number: 5 (lower is better)
Translates to: AETPPMVVVSILLYASYLPLQSL*LFSFAC
Trigger: GCATGCAAATGAGAAAAGCAATAATGATTGAAGTGG...GAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTATGTCCTTCCGATTACTaGACAACAGACAGACAACTA +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLCPSDY*TTDRQL
Trigger: TAGTTGTCTGTCTGTTGTCAAGTAATCGGAAGGACA...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCAACAAATCCTGCGATaGACCTCCGCCCAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNQQILR*TSAQLS
Trigger: TGACAGCTGGGCGGAGGTCAATCGCAGGATTTGTTG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 90 bp AGTCGTCCCACTTCACGCTGCCTTTGCTCTGGAGTTAGTCTTGTATaGACGGCTAAGTCTTTCATCACGTTAAAATCATTACGCATTTTA +
Preference number: 5 (lower is better)
Translates to: SRPTSRCLCSGVSLV*TAKSFITLKSLRIL
Trigger: TAAAATGCGTAATGATTTTAACGTGATGAAAGACTTAGCCGTTCATACAAGACTAACTCCAGAGCAAAGGCAGCGTGAAGTGGGACGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS GCA 90 bp AGTTATAACTTCATTCATAAAGGCCTTGTCACTGTCCTGGGCAATTaGAGATGCACCCTTTCAAGAGATGTGCACCTTGAATCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: SYNFIHKGLVTVLGN*RCTLSRDVHLESRD
Trigger: ATCTCTTGATTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTGCCCAGGACAGTGACAAGGCCTTTATGAATGAAGTTATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS-3UTR CAA 90 bp AACCCCACCTATGGTTGTAGTGAGCATCCTACTTTACGCCTCTTATCTCCTTTAGTCTCGAAGCTCCCTTaGAACATTATCGTTTTTATG +
Preference number: 5 (lower is better)
Translates to: NPTYGCSEHPTLRLLSPLVSKLP*NIIVFM
Trigger: CATAAAAACGATAATGTTCAAAGGGAGCTTCGAGAC...TAAAGGAGATAAGAGGCGTAAAGTAGGATGCTCACTACAACCATAGGTGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACATGACAGTTTGCTGTTaGCCTAAGGTTCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNMTVCC*PKVRAT
Trigger: GGTGGCCCGAACCTTAGGCAAACAGCAAACTGTCAT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACATTGTTTTCTATTTCTaGGACCGCTGCCCTCGCCCT +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNIVFYF*DRCPRP
Trigger: AGGGCGAGGGCAGCGGTCCAAGAAATAGAAAACAAT...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS CCA 90 bp CAATTAGATCTTCGTGTTGAAAAAGAAGAGCTGAACGGAGTCTTCTaGCTTCCATCAGTGGGTTATAGTCAATGTGATACTGATATAAGG +
Preference number: 5 (lower is better)
Translates to: QLDLRVEKEELNGVF*LPSVGYSQCDTDIR
Trigger: CCTTATATCAGTATCACATTGACTATAACCCACTGATGGAAGCCAGAAGACTCCGTTCAGCTCTTCTTTTTCAACACGAAGATCTAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000245255.7
ENST00000540672.2
ENST00000542723.1
ENST00000546060.5
ENST00000613226.2
ENST00000631528.1
ENST00000632888.1
ENST00000633042.1
ENST00000634077.1
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGGTAGTAAAGGCGGTTaGACAGTGACAGATTTGGCT +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNGSKGG*TVTDLA
Trigger: AGCCAAATCTGTCACTGTCAAACCGCCTTTACTACC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCAAGTCGGTGATCTCTaGGTTGTATTGCTTCCTGTA +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNQVGDL*VVLLPV
Trigger: TACAGGAAGCAATACAACCAAGAGATCACCGACTTG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGAGAAGGACAGTAAGTaGGAATCAAAGCTCAAACCC +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNEKDSK*ESKLKP
Trigger: GGGTTTGAGCTTTGATTCCAACTTACTGTCCTTCTC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTCACCAACCTGTGACTaGGAATATCAATTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNSPTCD*EYQLGH
Trigger: ATGACCCAATTGATATTCCAAGTCACAGGTTGGTGA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGCACCTCTTGTTTCTTaGGACCAATCTGCAAATTGT +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNAPLVS*DQSANC
Trigger: ACAATTTGCAGATTGGTCCAAAGAAACAAGAGGTGC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACGGACCAATCTGCAAATaGTGGATTGTAATCAAATGT +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNGPICK*WIVIKC
Trigger: ACATTTGATTACAATCCACAATTTGCAGATTGGTCC...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACCCACTTCAATCATTATaGCTTTTCTCATTTGCATGC +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNPLQSL*LFSFAC
Trigger: GCATGCAAATGAGAAAAGCAATAATGATTGAAGTGG...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS-3UTR CAA 90 bp TTTATAAGTAGGACTTGCTCACTCCTGAAAGTACGTTTAAGTAAATCTCCAAACTTAATAGCATCGTATTaGTCCTTCCGATTACTTGAC +
Preference number: 5 (lower is better)
Translates to: FISRTCSLLKVRLSKSPNLIASY*SFRLLD
Trigger: GTCAAGTAATCGGAAGGACAAATACGATGCTATTAA...GTTTGGAGATTTACTTAAACGTACTTTCAGGAGTGAGCAAGTCCTACTTATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 72 bp GGGCAGCGAGCAACAGGCGCTCTTTTCCCGGGCGGATaGACACCGCCTCCCGGGCGCCGGCCTCGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: GQRATGALFPGG*TPPPGRRPRVC
Trigger: ACAGACACGAGGCCGGCGCCCGGGAGGCGGTGTTCATCCGCCCGGGAAAAGAGCGCCTGTTGCTCGCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS GCA 72 bp TTCTTGGACCGCTGCCCTCGCCCTAGTCCTGGTCCTTaGACCTCAGCCCGAGGCCAACAGCCCCAACGGCTC +
Preference number: 6 (lower is better)
Translates to: FLDRCPRPSPGP*TSARGQQPQRL
Trigger: GAGCCGTTGGGGCTGTTGGCCTCGGGCTGAGGTGCAAGGACCAGGACTAGGGCGAGGGCAGCGGTCCAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS CAA 72 bp TTTTCTATTTCTAGCACCTCAGCCTGGCCCCGCACCTaGGACCGCTGCCCTCGCCCTAGTCCTGGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: FSISSTSAWPRT*DRCPRPSPGPC
Trigger: GCAAGGACCAGGACTAGGGCGAGGGCAGCGGTCCAAGGTGCGGGGCCAGGCTGAGGTGCTAGAAATAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546060.5
ENST00000634077.1
CDS CCA 72 bp GCGCTGTCTCCTGACCGCGGGCCCTTCCTCTGGCTCTaGCTCGGGCTCTCCCAGTCATTGTTTTCTATTTCT +
Preference number: 6 (lower is better)
Translates to: ALSPDRGPFLWL*LGLSQSLFSIS
Trigger: AGAAATAGAAAACAATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000245255.7
ENST00000535956.5
ENST00000539400.5
ENST00000539995.5
ENST00000542723.1
ENST00000546060.5
ENST00000613226.2
ENST00000632888.1
ENST00000633042.1
ENST00000633252.1
ENST00000633272.1
ENST00000634077.1
ENST00000634115.1
CDS TCA 72 bp TCAGCTGGCCGTCTCCTACGCCATCGCGGTACACGATaGTCCGGCTGGGCATGTACTCATTGCAGCTATTCC +
Preference number: 6 (lower is better)
Translates to: SAGRLLRHRGTR*SGWACTHCSYS
Trigger: GGAATAGCTGCAATGAGTACATGCCCAGCCGGATCATCGTGTACCGCGATGGCGTAGGAGACGGCCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS CCA 72 bp TCCCAGTCATTGTTTTCTATTTCTAGCACCTCAGCCTaGCCCCGCACCTTGGACCGCTGCCCTCGCCCTAGT +
Preference number: 6 (lower is better)
Translates to: SQSLFSISSTSA*PRTLDRCPRPS
Trigger: ACTAGGGCGAGGGCAGCGGTCCAAGGTGCGGGGCCAGGCTGAGGTGCTAGAAATAGAAAACAATGACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546060.5
ENST00000634077.1
CDS GCA 72 bp CCCCGCCTTCTCTTGGGCTGGCTGACCAAGACAGGCTaGTTCAAGTCGGTGATCTCTTGGTTGTATTGCTTC +
Preference number: 6 (lower is better)
Translates to: PRLLLGWLTKTG*FKSVISWLYCF
Trigger: GAAGCAATACAACCAAGAGATCACCGACTTGAAGCAGCCTGTCTTGGTCAGCCAGCCCAAGAGAAGGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS TCA 72 bp TATTCCAAGCCCTCAGAGCCGCTTGCAGGCAGACTTTaGGCCCATCTACCAGCTCCTGTCCTCTATCCTGAA +
Preference number: 6 (lower is better)
Translates to: YSKPSEPLAGRL*AHLPAPVLYPE
Trigger: TTCAGGATAGAGGACAGGAGCTGGTAGATGGGCTCAAAGTCTGCCTGCAAGCGGCTCTGAGGGCTTGGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS GCA 72 bp ACCTCCGCCCAGCTGTCATGTCATGGTAACAATCGATaGCAACGATCATCACGAGCTTCAGGGGGATGTCCA +
Preference number: 6 (lower is better)
Translates to: TSAQLSCHGNNR*QRSSRASGGCP
Trigger: TGGACATCCCCCTGAAGCTCGTGATGATCGTTGGCATCGATTGTTACCATGACATGACAGCTGGGCGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS TCA 72 bp ACTTTGAGCCCATCTACCAGCTCCTGTCCTCTATCCTaGAATATGCAGCGTGAGAACCAGCGGGTCATCCCT +
Preference number: 6 (lower is better)
Translates to: TLSPSTSSCPLS*NMQRENQRVIP
Trigger: AGGGATGACCCGCTGGTTCTCACGCTGCATATTTCAGGATAGAGGACAGGAGCTGGTAGATGGGCTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS GCA 72 bp ATTGTTTTCTATTTCTCTCCGATTCGCTACCAGCTCTaGCAAAGACGCTTCCACCTAACGTCCCTCCGGCGC +
Preference number: 6 (lower is better)
Translates to: IVFYFSPIRYQL*QRRFHLTSLRR
Trigger: GCGCCGGAGGGACGTTAGGTGGAAGCGTCTTTGGCAGAGCTGGTAGCGAATCGGAGAGAAATAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539995.5
ENST00000633252.1
CDS CCA 72 bp AGAAAGCAAGTGTGTGCTTCCAATAACCACACTCGCTaGAAATCACCTCTCCGATTCGCTACCAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RKQVCASNNHTR*KSPLRFATSSA
Trigger: GGCAGAGCTGGTAGCGAATCGGAGAGGTGATTTCCAGCGAGTGTGGTTATTGGAAGCACACACTTGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535956.5
ENST00000634115.1
CDS CAA 90 bp CTGTCCTGGGCAATTGCAGATGCACCCTTTCAAGAGATGTGCACCTaGAATCAAGAGATCAAGCCAACTGGACTGTGGTGCAAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: LSWAIADAPFQEMCT*NQEIKPTGLWCKSA
Trigger: TGCACTCTTGCACCACAGTCCAGTTGGCTTGATCTCTTGATTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTGCCCAGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS CAA 90 bp AAGCGGCTGCATCGTCTTCTGCAGGTTAGAGGTAGTAAAGGCGGTTaGACAGTGACAGATTTGGCTCTCTGTGAATACTCTGGCCAACAA +
Preference number: 6 (lower is better)
Translates to: KRLHRLLQVRGSKGG*TVTDLALCEYSGQQ
Trigger: TTGTTGGCCAGAGTATTCACAGAGAGCCAAATCTGTCACTGTCAAACCGCCTTTACTACCTCTAACCTGCAGAAGACGATGCAGCCGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS CAA 72 bp GCAATTGCAGATGCACCCTTTCAAGAGATGTGCACCTaGAATCAAGAGATCAAGCCAACTGGACTGTGGTGC +
Preference number: 6 (lower is better)
Translates to: AIADAPFQEMCT*NQEIKPTGLWC
Trigger: GCACCACAGTCCAGTTGGCTTGATCTCTTGATTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS TCA 72 bp GTATGTGGTCTGGCTTCAGGCCGCTGTTGTCATAGATaGCATTGTAATGTGTGGGAGAAACACTACCACTTC +
Preference number: 6 (lower is better)
Translates to: VCGLASGRCCHR*HCNVWEKHYHF
Trigger: GAAGTGGTAGTGTTTCTCCCACACATTACAATGTCATCTATGACAACAGCGGCCTGAAGCCAGACCACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245255.7
ENST00000541480.1
ENST00000613226.2
ENST00000631714.1
ENST00000632888.1
CDS TCA 72 bp CAATTGCAGATGCACCCTTTCAAGAGATGTGCACCTTaGATCAAGAGATCAAGCCAACTGGACTGTGGTGCA +
Preference number: 6 (lower is better)
Translates to: QLQMHPFKRCAP*IKRSSQLDCGA
Trigger: TGCACCACAGTCCAGTTGGCTTGATCTCTTGATTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS GCA 72 bp AACATTCCTACATTCAACAAACTCAGTTGCTTACCTTaGACTGGGCACTGCAGTAGGGCCAAAGGGGAAAAC +
Preference number: 6 (lower is better)
Translates to: NIPTFNKLSCLP*TGHCSRAKGEN
Trigger: GTTTTCCCCTTTGGCCCTACTGCAGTGCCCAGTGCAAGGTAAGCAACTGAGTTTGTTGAATGTAGGAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542723.1
ENST00000633042.1
CDS CCA 72 bp AGAGATGTGCACCTTGAATCAAGAGATCAAGCCAACTaGACTGTGGTGCAAGAGTGCAGGAGCATATGTTTG +
Preference number: 6 (lower is better)
Translates to: RDVHLESRDQAN*TVVQECRSICL
Trigger: CAAACATATGCTCCTGCACTCTTGCACCACAGTCCAGTTGGCTTGATCTCTTGATTCAAGGTGCACATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS TCA 72 bp TGGTCTAGGTTCTGCCTTGTATTCACACCAAGATCATaGAAATCTCTACGACGACCTCCTCTCTCTGCTAAC +
Preference number: 6 (lower is better)
Translates to: WSRFCLVFTPRS*KSLRRPPLSAN
Trigger: GTTAGCAGAGAGAGGAGGTCGTCGTAGAGATTTTCATGATCTTGGTGTGAATACAAGGCAGAACCTAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000245255.7
ENST00000535956.5
ENST00000539400.5
ENST00000539995.5
ENST00000540672.2
ENST00000542723.1
ENST00000546060.5
ENST00000613226.2
ENST00000631528.1
ENST00000632888.1
ENST00000633042.1
ENST00000633252.1
ENST00000633272.1
ENST00000634077.1
ENST00000634115.1
CDS GCA 72 bp TTCATTCATAAAGGCCTTGTCACTGTCCTGGGCAATTaGAGATGCACCCTTTCAAGAGATGTGCACCTTGAA +
Preference number: 6 (lower is better)
Translates to: FIHKGLVTVLGN*RCTLSRDVHLE
Trigger: TTCAAGGTGCACATCTCTTGAAAGGGTGCATCTGCAATTGCCCAGGACAGTGACAAGGCCTTTATGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS CCA 72 bp CTGTTTGCAAAATTCTTCCTGAGAAGGACAGTAAGTTaGAATCAAAGCTCAAACCCCAGTCTCGAAGCTCCC +
Preference number: 6 (lower is better)
Translates to: LFAKFFLRRTVS*NQSSNPSLEAP
Trigger: GGGAGCTTCGAGACTGGGGTTTGAGCTTTGATTCCAACTTACTGTCCTTCTCAGGAAGAATTTTGCAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS CAA 72 bp CATCGTCTTCTGCAGGTTAGAGGTAGTAAAGGCGGTTaGACAGTGACAGATTTGGCTCTCTGTGAATACTCT +
Preference number: 6 (lower is better)
Translates to: HRLLQVRGSKGG*TVTDLALCEYS
Trigger: AGAGTATTCACAGAGAGCCAAATCTGTCACTGTCAAACCGCCTTTACTACCTCTAACCTGCAGAAGACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000245255.7
ENST00000613226.2
CDS TCA 72 bp TTGACAACAGACAGACAACTATCTGGGTGTCTGCTGTaGCCTTTTGCTGTAAGACTCTTAAGTAGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: LTTDRQLSGCLL*PFAVRLLSRLQ
Trigger: CTGAAGCCTACTTAAGAGTCTTACAGCAAAAGGTCACAGCAGACACCCAGATAGTTGTCTGTCTGTTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS GCA 72 bp TCAAGAGATCAAGCCAACTGGACTGTGGTGCAAGAGTaGAGGAGCATATGTTTGCTGACTGGGAAATTATTT +
Preference number: 6 (lower is better)
Translates to: SRDQANWTVVQE*RSICLLTGKLF
Trigger: AAATAATTTCCCAGTCAGCAAACATATGCTCCTGCACTCTTGCACCACAGTCCAGTTGGCTTGATCTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS CCA 72 bp GTTATAACTTCATTCATAAAGGCCTTGTCACTGTCCTaGGCAATTGCAGATGCACCCTTTCAAGAGATGTGC +
Preference number: 6 (lower is better)
Translates to: VITSFIKALSLS*AIADAPFQEMC
Trigger: GCACATCTCTTGAAAGGGTGCATCTGCAATTGCCCAGGACAGTGACAAGGCCTTTATGAATGAAGTTATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS CCA 72 bp CTTCGTGTTGAAAAAGAAGAGCTGAACGGAGTCTTCTaGCTTCCATCAGTGGGTTATAGTCAATGTGATACT +
Preference number: 6 (lower is better)
Translates to: LRVEKEELNGVF*LPSVGYSQCDT
Trigger: AGTATCACATTGACTATAACCCACTGATGGAAGCCAGAAGACTCCGTTCAGCTCTTCTTTTTCAACACGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000245255.7
ENST00000540672.2
ENST00000542723.1
ENST00000546060.5
ENST00000613226.2
ENST00000631528.1
ENST00000632888.1
ENST00000633042.1
ENST00000634077.1
CDS CAA 72 bp AATGGTTTCCTAGTTATAACTTCATTCATAAAGGCCTaGTCACTGTCCTGGGCAATTGCAGATGCACCCTTT +
Preference number: 6 (lower is better)
Translates to: NGFLVITSFIKA*SLSWAIADAPF
Trigger: AAAGGGTGCATCTGCAATTGCCCAGGACAGTGACAAGGCCTTTATGAATGAAGTTATAACTAGGAAACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540672.2
ENST00000631528.1
CDS TCA 72 bp ACTTCACGCTGCCTTTGCTCTGGAGTTAGTCTTGTATaGACGGCTAAGTCTTTCATCACGTTAAAATCATTA +
Preference number: 6 (lower is better)
Translates to: TSRCLCSGVSLV*TAKSFITLKSL
Trigger: TAATGATTTTAACGTGATGAAAGACTTAGCCGTTCATACAAGACTAACTCCAGAGCAAAGGCAGCGTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245255.7
ENST00000613226.2
ENST00000632888.1
CDS CCA 72 bp TTCTGGAGAGGAAACAATCTTGAAGACAATACTCAATaGAGGCAATCGCATTTGATAATTTCTACAATGTTA +
Preference number: 6 (lower is better)
Translates to: FWRGNNLEDNTQ*RQSHLIISTML
Trigger: TAACATTGTAGAAATTATCAAATGCGATTGCCTCCATTGAGTATTGTCTTCAAGATTGTTTCCTCTCCAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542723.1
ENST00000633042.1