Pregenerated sensors for PITX3 (Homo sapiens)
Ensembl gene IDs: ENSG00000107859Ensembl transcript IDs: ENST00000370002.8, ENST00000539804.1
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCCTCTCCTGAGCCGGTaGCCCCCAGCTGCCCAAACA | + |
Preference number: 2 (lower is better) Translates to: GSLEKAGWAKGELAPGELPLLSR*PPAAQT Trigger: TGTTTGGGCAGCTGGGGGGCACCGGCTCAGGAGAGG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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3UTR-3UTR TCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTAGTCCGCGGAGGCTGTaGATCGTTGCCCCCGCCCTC | + |
Preference number: 2 (lower is better) Translates to: PGSWSLFLALVPGARSVCSPRRL*IVAPAL Trigger: GAGGGCGGGGGCAACGATTCACAGCCTCCGCGGACT...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370002.8 |
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3UTR-3UTR TCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGGCAAGCCAGTCAAAATaGCCCCAGTCCGCGGAGGCT | + |
Preference number: 2 (lower is better) Translates to: GSLEKAGWAKGELAPGELASQSK*PQSAEA Trigger: AGCCTCCGCGGACTGGGGTCATTTTGACTGGCTTGC...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000370002.8 |
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3UTR-3UTR CAA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGGAGGCTGTGAATCGTaGCCCCCGCCCTCGGGGATG | + |
Preference number: 3 (lower is better) Translates to: GRGSLEKAGWAKGELAPGGGCES*PPPSGM Trigger: CATCCCCGAGGGCGGGGGCAACGATTCACAGCCTCC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENST00000370002.8 |
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CDS-3UTR TCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGTGGCGCGCCGGTTCTTaGACCACACCCGCACGCGGG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGWRAGS*TTPARG Trigger: CCCGCGTGCGGGTGTGGTTCAAGAACCGGCGCGCCA...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGGGATGGGCCAAGGGTaGGTTGGCCCCCGGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGGMGQG*VGPRGA Trigger: AGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCGGACTAAGGTTGGCTaGCGGGGGCGGCCCGTGCAC | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGRTKVG*RGRPVH Trigger: GTGCACGGGCCGCCCCCGGCAGCCAACCTTAGTCCG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCCGTGCTCTGGGAGCTaGGGGTGCGGAGTGCCAGCG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGPCSGS*GCGVPA Trigger: CGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCAGCGAACCGTCCTCTaGGGAGCCGCCGGGCAGCGA | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGQRTVL*GAAGQR Trigger: TCGCTGCCCGGCGGCTCCCCAGAGGACGGTTCGCTG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCGGCGGAGGGCACCATaGAGGCGGCGATGGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGRRRAP*RRRWSW Trigger: CCAGCTCCATCGCCGCCTCCATGGTGCCCTCCGCCG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGGGCCAAGGGTGAGTTaGCCCCCGGGGAGCTGGTCC | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGGPRVS*PPGSWS Trigger: GGACCAGCTCCCCGGGGGCCAACTCACCCTTGGCCC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGGGCCTCTGCCTCGCTaGGCAGGCCGAACTCCATGG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGGPLPR*AGRTPW Trigger: CCATGGAGTTCGGCCTGCTCAGCGAGGCAGAGGCCC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 71% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGCTCGGCCTGCTGGCTaGGCTCGCGCTTCCGCCATT | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGARPAG*ARASAI Trigger: AATGGCGGAAGCGCGAGCGCAGCCAGCAGGCCGAGC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGGCGAGAAGACGGGCTaGGAAGCCAGAGGCCCCACG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGGEKTG*EARGPT Trigger: CGTGGGGCCTCTGGCTTCGCAGCCCGTCTTCTCGCC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCGGACTAAGGTTGGCTaGCGGGGGCGGCCCGTGCAC | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELRTKVG*RGRPVH Trigger: GTGCACGGGCCGCCCCCGGCAGCCAACCTTAGTCCG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCCGCTCGGGCGCTCCTaGACTCTCGGAGGGAGTGAG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGPLGRS*TLGGSE Trigger: CTCACTCCCTCCGAGAGTCCAGGAGCGCCCGAGCGG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370002.8 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGCGGGGCAAGAGCCTTaGGCGGCCAGTTGCCGTACG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGAGQEP*AASCRT Trigger: CGTACGGCAACTGGCCGCCCAAGGCTCTTGCCCCGC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCGGAGTGCCAGCGTCTaGCAGCGACAGGGCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELRSASV*QRQGRA Trigger: AGCCCTGCCCTGTCGCTGTCAGACGCTGGCACTCCG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGGTAGCTGCTGGCTGGTaGAGTGCGTGCGCTGCCGCC | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELVAAGW*SACAAA Trigger: GGCGGCAGCGCACGCACTTCACCAGCCAGCAGCTAC...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGAGGGCTCCGGGCCTCTaGCTCGCTGAGCAGGCCGAA | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELRAPGL*LAEQAE Trigger: TTCGGCCTGCTCAGCGAGGCAGAGGCCCGGAGCCCT...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGTGGCCCTTGCAGCCGTaGTCTGGGAGCTGGGGGTGC | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELWPLQP*SGSWGC Trigger: GCACCCCCAGCTCCCAGAGCACGGCTGCAAGGGCCA...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGGCTCGGCCTGCTGGCTaGGCTCGCGCTTCCGCCATT | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELARPAG*ARASAI Trigger: AATGGCGGAAGCGCGAGCGCAGCCAGCAGGCCGAGC...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGCGGCGCCGCGAAGCTaGCTTTGCATAGCTCGGCCT | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGAAPRS*LCIARP Trigger: AGGCCGAGCTATGCAAAGGCAGCTTCGCGGCGCCGC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGGGCGAGAAGACGGGCTaGGAAGCCAGAGGCCCCACG | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELGEKTG*EARGPT Trigger: CGTGGGGCCTCTGGCTTCGCAGCCCGTCTTCTCGCC...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCTTGCAGCCGTGCTCTaGGAGCTGGGGGTGCGGAGT | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGLAAVL*ELGVRS Trigger: ACTCCGCACCCCCAGCTCCCAGAGCACGGCTGCAAG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGGACTCTCGGAGGGAGTaGGCCTCACCGCGTACTGCC | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELDSRRE*ASPRTA Trigger: GGCAGTACGCGGTGAGGCTCACTCCCTCCGAGAGTC...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370002.8 |
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CDS-3UTR TCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTTGGCGCGCCGGTTCTTaGACCACACCCGCACGCGGG | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCWRAGS*TTPARG Trigger: CCCGCGTGCGGGTGTGGTTCAAGAACCGGCGCGCCA...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGCACAGCGGGGTAGCTaGAGGAGGCGTGCTGTTTGG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGAQRGS*RRRAVW Trigger: CCAAACAGCACGCCTCCTTCAGCTACCCCGCTGTGC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGGGATGGGCCAAGGGTaGGTTGGCCCCCGGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCGMGQG*VGPRGA Trigger: AGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCCCAGTAGCGGCGGCTaGGGCGGCGATCTAGAGGGC | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCPSSGG*GGDLEG Trigger: GCCCTCTAGATCGCCGCCGCAGCCGCCGCTACTGGG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370002.8 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGGCTGGGGGTGCGGAGTaGCAGCGTCTGACAGCGACA | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELAGGAE*QRLTAT Trigger: TGTCGCTGTCAGACGCTGGCACTCCGCACCCCCAGC...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGTGTGCTCCTGGCCCTTaGAGCCGTGCTCTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGCAPGP*SRALGA Trigger: AGCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACA...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCCTTGGGCGGCCAGTTaGCGTACGAGTAGCCGGGGT | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELPWAAS*RTSSRG Trigger: ACCCCGGCTACTCGTACGGCAACTGGCCGCCCAAGG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCCGTGCTCTGGGAGCTaGGGGTGCGGAGTGCCAGCG | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCPCSGS*GCGVPA Trigger: CGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCAGCGAACCGTCCTCTaGGGAGCCGCCGGGCAGCGA | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCQRTVL*GAAGQR Trigger: TCGCTGCCCGGCGGCTCCCCAGAGGACGGTTCGCTG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGGGCGATGGAGCTGGGTaGCGAGAAGACGGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELGDGAG*REDGLR Trigger: TCGCAGCCCGTCTTCTCGCCACCCAGCTCCATCGCC...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGTGGCCCCCGGGGAGCTaGTCCCTGTTCCTGGCTTTA | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGWPPGS*SLFLAL Trigger: TAAAGCCAGGAACAGGGACCAGCTCCCCGGGGGCCA...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCTGGAGAAGGCGGGATaGGCCAAGGGTGAGTTGGCC | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGLEKAG*AKGELA Trigger: GGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGGGCCTCTGCCTCGCTaGGCAGGCCGAACTCCATGG | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCGPLPR*AGRTPW Trigger: CCATGGAGTTCGGCCTGCTCAGCGAGGCAGAGGCCC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGTGTGCTCCTGGCCCTTaGAGCCGTGCTCTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELCAPGP*SRALGA Trigger: AGCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACA...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCCGCGAAGCTGCCTTTaGATAGCTCGGCCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELPRSCL*IARPAG Trigger: GCCAGCAGGCCGAGCTATGCAAAGGCAGCTTCGCGG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCGAATGGAAAGGTCTTaGCGGCGAGCGGCGGGGCAA | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELRMERS*RRAAGQ Trigger: TTGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGCTGGGGGTGCGGAGTaGCAGCGTCTGACAGCGACA | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCAGGAE*QRLTAT Trigger: TGTCGCTGTCAGACGCTGGCACTCCGCACCCCCAGC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGTTTTCTGAGTCGCTGTaGTCCTGGCCCTTGCAGCCG | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGFSESL*SWPLQP Trigger: CGGCTGCAAGGGCCAGGAGCACAGCGACTCAGAAAA...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGTGAAGTGCGTGCGCTaGCGCCGCTGCTTCTTTTTC | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGVKCVR*RRCFFF Trigger: GAAAAAGAAGCAGCGGCGGCAGCGCACGCACTTCAC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCCTCTCCTGAGCCGGTaGCCCCCAGCTGCCCAAACA | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCPLLSR*PPAAQT Trigger: TGTTTGGGCAGCTGGGGGGCACCGGCTCAGGAGAGG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGAGCTCCTGTAGCTGCTaGCTGGTGAAGTGCGTGCGC | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELSSCSC*LVKCVR Trigger: GCGCACGCACTTCACCAGCCAGCAGCTACAGGAGCT...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGGCGATGGAGCTGGGTaGCGAGAAGACGGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCGDGAG*REDGLR Trigger: TCGCAGCCCGTCTTCTCGCCACCCAGCTCCATCGCC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR TCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGCACAGCGGGGTAGCTaGAGGAGGCGTGCTGTTTGG | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCAQRGS*RRRAVW Trigger: CCAAACAGCACGCCTCCTTCAGCTACCCCGCTGTGC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGAGGGCTAGTGCGTCCTaGAACAGGCAGACTCCCAGT | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELRASAS*NRQTPS Trigger: ACTGGGAGTCTGCCTGTTGCAGGACGCACTAGCCCT...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370002.8 |
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CDS-3UTR GCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCCGCGAAGCTGCCTTTaGATAGCTCGGCCTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCPRSCL*IARPAG Trigger: GCCAGCAGGCCGAGCTATGCAAAGGCAGCTTCGCGG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGAGTCGCTGTGCTCCTaGCCCTTGCAGCCGTGCTCT | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCESLCS*PLQPCS Trigger: AGAGCACGGCTGCAAGGGCCAGGAGCACAGCGACTC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCGAATGGAAAGGTCTTaGCGGCGAGCGGCGGGGCAA | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCRMERS*RRAAGQ Trigger: TTGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGCTTTCCACGGCGTACTaGCACGGACTAAGGTTGGCT | + |
Preference number: 4 (lower is better) Translates to: GRGSLEKAGWAKGELAPGLSTAY*HGLRLA Trigger: AGCCAACCTTAGTCCGTGCCAGTACGCCGTGGAAAG...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCTGGAGAAGGCGGGATaGGCCAAGGGTGAGTTGGCC | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCLEKAG*AKGELA Trigger: GGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGTCTAGCTCCTGTAGCTaGTGGCTGGTGAAGTGCGTG | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELSSSCS*WLVKCV Trigger: CACGCACTTCACCAGCCAGCAGCTACAGGAGCTAGA...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTAGCTCCTGTAGCTGCTaGCTGGTGAAGTGCGTGCGC | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCSSCSC*LVKCVR Trigger: GCGCACGCACTTCACCAGCCAGCAGCTACAGGAGCT...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCGAGTTGAAGGCGAATaGAAAGGTCTTGGCGGCGAG | + |
Preference number: 4 (lower is better) Translates to: GSLEKAGWAKGELAPGELRVEGE*KGLGGE Trigger: CTCGCCGCCAAGACCTTTCCATTCGCCTTCAACTCG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTTTTTCTGAGTCGCTGTaGTCCTGGCCCTTGCAGCCG | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCFSESL*SWPLQP Trigger: CGGCTGCAAGGGCCAGGAGCACAGCGACTCAGAAAA...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGTGAAGTGCGTGCGCTaGCGCCGCTGCTTCTTTTTC | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCVKCVR*RRCFFF Trigger: GAAAAAGAAGCAGCGGCGGCAGCGCACGCACTTCAC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR GCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTTCTAGCTCCTGTAGCTaGTGGCTGGTGAAGTGCGTG | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCSSSCS*WLVKCV Trigger: CACGCACTTCACCAGCCAGCAGCTACAGGAGCTAGA...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCGAGTTGAAGGCGAATaGAAAGGTCTTGGCGGCGAG | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCRVEGE*KGLGGE Trigger: CTCGCCGCCAAGACCTTTCCATTCGCCTTCAACTCG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CCA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCTTTCCACGGCGTACTaGCACGGACTAAGGTTGGCT | + |
Preference number: 4 (lower is better) Translates to: PGSWSLFLALVPGARSVCLSTAY*HGLRLA Trigger: AGCCAACCTTAGTCCGTGCCAGTACGCCGTGGAAAG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGTGGCACGGACTAAGGTaGGCTGCCGGGGGCGGCCCG | + |
Preference number: 5 (lower is better) Translates to: GRGSLEKAGWAKGELAPGWHGLR*AAGGGP Trigger: CGGGCCGCCCCCGGCAGCCAACCTTAGTCCGTGCCA...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 90 bp | GCTCCTGGCCCTTGCAGCCGTGCTCTGGGAGCTGGGGGTGCGGAGTaGCAGCGTCTGACAGCGACAGGGCAGGGCTCCGGGCCTCTGCCT | + |
Preference number: 5 (lower is better) Translates to: APGPCSRALGAGGAE*QRLTATGQGSGPLP Trigger: AGGCAGAGGCCCGGAGCCCTGCCCTGTCGCTGTCAGACGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGGCTGCAAGGGCCAGGAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGTGGGCCAAGGGTGAGTaGGCCCCCGGGGAGCTGGTC | + |
Preference number: 5 (lower is better) Translates to: GRGSLEKAGWAKGELAPGWAKGE*APGELV Trigger: GACCAGCTCCCCGGGGGCCAACTCACCCTTGGCCCA...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGCGAATGGAAAGGTCTaGGCGGCGAGCGGCGGGGCA | + |
Preference number: 5 (lower is better) Translates to: GRGSLEKAGWAKGELAPGANGKV*AASGGA Trigger: TGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCGC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCTGTGCTCCTGGCCCTaGCAGCCGTGCTCTGGGAGC | + |
Preference number: 5 (lower is better) Translates to: GSLEKAGWAKGELAPGELLCSWP*QPCSGS Trigger: GCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACAG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGCCGCGAAGCTGCCTTaGCATAGCTCGGCCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: GRGSLEKAGWAKGELAPGAAKLP*HSSACW Trigger: CCAGCAGGCCGAGCTATGCAAAGGCAGCTTCGCGGC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTTGGCACGGACTAAGGTaGGCTGCCGGGGGCGGCCCG | + |
Preference number: 5 (lower is better) Translates to: PGSWSLFLALVPGARSVCWHGLR*AAGGGP Trigger: CGGGCCGCCCCCGGCAGCCAACCTTAGTCCGTGCCA...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 90 bp | TCTGAGTCGCTGTGCTCCTGGCCCTTGCAGCCGTGCTCTGGGAGCTaGGGGTGCGGAGTGCCAGCGTCTGACAGCGACAGGGCAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: SESLCSWPLQPCSGS*GCGVPASDSDRAGL Trigger: GAGCCCTGCCCTGTCGCTGTCAGACGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACAGCGACTCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGGCGGGGCAAGAGCCTaGGGCGGCCAGTTGCCGTAC | + |
Preference number: 5 (lower is better) Translates to: PGSWSLFLALVPGARSVCGGARA*GGQLPY Trigger: GTACGGCAACTGGCCGCCCAAGGCTCTTGCCCCGCC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 90 bp | GCCGAGGCCTTTTCTGAGTCGCTGTGCTCCTGGCCCTTGCAGCCGTaGTCTGGGAGCTGGGGGTGCGGAGTGCCAGCGTCTGACAGCGAC | + |
Preference number: 5 (lower is better) Translates to: AEAFSESLCSWPLQP*SGSWGCGVPASDSD Trigger: GTCGCTGTCAGACGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACAGCGACTCAGAAAAGGCCTCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 90 bp | TCATACGGGCCTTTCCACGGCGTACTGGCACGGACTAAGGTTGGCTaGCGGGGGCGGCCCGTGCACAGCGGGGTAGCTGAAGGAGGCGTG | + |
Preference number: 5 (lower is better) Translates to: SYGPFHGVLARTKVG*RGRPVHSGVAEGGV Trigger: CACGCCTCCTTCAGCTACCCCGCTGTGCACGGGCCGCCCCCGGCAGCCAACCTTAGTCCGTGCCAGTACGCCGTGGAAAGGCCCGTATGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 90 bp | GGGCTGCGAAGCCAGAGGCCCCACGTTGACCGAGTTGAAGGCGAATaGAAAGGTCTTGGCGGCGAGCGGCGGGGCAAGAGCCTTGGGCGG | + |
Preference number: 5 (lower is better) Translates to: GLRSQRPHVDRVEGE*KGLGGERRGKSLGR Trigger: CCGCCCAAGGCTCTTGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCGCCTTCAACTCGGTCAACGTGGGGCCTCTGGCTTCGCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTCTGTGCTCCTGGCCCTaGCAGCCGTGCTCTGGGAGC | + |
Preference number: 5 (lower is better) Translates to: PGSWSLFLALVPGARSVCLCSWP*QPCSGS Trigger: GCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACAG...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGCGAATGGAAAGGTCTaGGCGGCGAGCGGCGGGGCA | + |
Preference number: 5 (lower is better) Translates to: PGSWSLFLALVPGARSVCANGKV*AASGGA Trigger: TGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCGC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGGAGGGGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGCCAGAGGCCCCACGTaGACCGAGTTGAAGGCGAAT | + |
Preference number: 5 (lower is better) Translates to: GRGSLEKAGWAKGELAPGARGPT*TELKAN Trigger: ATTCGCCTTCAACTCGGTCAACGTGGGGCCTCTGGC...CCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCCCCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 90 bp | AGGCGAATGGAAAGGTCTTGGCGGCGAGCGGCGGGGCAAGAGCCTTaGGCGGCCAGTTGCCGTACGAGTAGCCGGGGTACACCTCCTCGT | + |
Preference number: 5 (lower is better) Translates to: RRMERSWRRAAGQEP*AASCRTSSRGTPPR Trigger: ACGAGGAGGTGTACCCCGGCTACTCGTACGGCAACTGGCCGCCCAAGGCTCTTGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTGCCGCGAAGCTGCCTTaGCATAGCTCGGCCTGCTGG | + |
Preference number: 5 (lower is better) Translates to: PGSWSLFLALVPGARSVCAAKLP*HSSACW Trigger: CCAGCAGGCCGAGCTATGCAAAGGCAGCTTCGCGGC...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 90 bp | GGCACCATGGAGGCGGCGATGGAGCTGGGTGGCGAGAAGACGGGCTaGGAAGCCAGAGGCCCCACGTTGACCGAGTTGAAGGCGAATGGA | + |
Preference number: 5 (lower is better) Translates to: GTMEAAMELGGEKTG*EARGPTLTELKANG Trigger: TCCATTCGCCTTCAACTCGGTCAACGTGGGGCCTCTGGCTTCGCAGCCCGTCTTCTCGCCACCCAGCTCCATCGCCGCCTCCATGGTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGCCCACGTTGACCGAGTaGAAGGCGAATGGAAAGGTC | + |
Preference number: 5 (lower is better) Translates to: GSLEKAGWAKGELAPGELPTLTE*KANGKV Trigger: GACCTTTCCATTCGCCTTCAACTCGGTCAACGTGGG...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | GGAAGCCTGGAGAAGGCGGGATGGGCCAAGGGTGAGTTGGCCCCCGGGGAGCTGTTATTTCATTTATCTTaGAAAACGAGGGAGGGGAAG | + |
Preference number: 5 (lower is better) Translates to: GSLEKAGWAKGELAPGELLFHLS*KTREGK Trigger: CTTCCCCTCCCTCGTTTTCAAAGATAAATGAAATAA...CAGCTCCCCGGGGGCCAACTCACCCTTGGCCCATCCCGCCTTCTCCAGGCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS-3UTR CAA 90 bp | CCGGGGAGCTGGTCCCTGTTCCTGGCTTTAGTCCCAGGGGCGCGGTCTGTGTGTTTATTTCATTTATCTTaGAAAACGAGGGAGGGGAAG | + |
Preference number: 5 (lower is better) Translates to: PGSWSLFLALVPGARSVCLFHLS*KTREGK Trigger: CTTCCCCTCCCTCGTTTTCAAAGATAAATGAAATAA...ACACACAGACCGCGCCCCTGGGACTAAAGCCAGGAACAGGGACCAGCTCCCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 72 bp | GCACGGTGCCCGGGGCAGCCGCGGCGGAGGGCACCATaGAGGCGGCGATGGAGCTGGGTGGCGAGAAGACGG | + |
Preference number: 6 (lower is better) Translates to: ARCPGQPRRRAP*RRRWSWVARRR Trigger: CCGTCTTCTCGCCACCCAGCTCCATCGCCGCCTCCATGGTGCCCTCCGCCGCGGCTGCCCCGGGCACCGTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 72 bp | GGGCAGCCGCGGCGGAGGGCACCATGGAGGCGGCGATaGAGCTGGGTGGCGAGAAGACGGGCTGCGAAGCCA | + |
Preference number: 6 (lower is better) Translates to: GQPRRRAPWRRR*SWVARRRAAKP Trigger: TGGCTTCGCAGCCCGTCTTCTCGCCACCCAGCTCCATCGCCGCCTCCATGGTGCCCTCCGCCGCGGCTGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 72 bp | GGCGGGGCCGCTCATACGGGCCTTTCCACGGCGTACTaGCACGGACTAAGGTTGGCTGCCGGGGGCGGCCCG | + |
Preference number: 6 (lower is better) Translates to: GGAAHTGLSTAY*HGLRLAAGGGP Trigger: CGGGCCGCCCCCGGCAGCCAACCTTAGTCCGTGCCAGTACGCCGTGGAAAGGCCCGTATGAGCGGCCCCGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 72 bp | CCTTGCAGCCGTGCTCTGGGAGCTGGGGGTGCGGAGTaGCAGCGTCTGACAGCGACAGGGCAGGGCTCCGGG | + |
Preference number: 6 (lower is better) Translates to: PCSRALGAGGAE*QRLTATGQGSG Trigger: CCCGGAGCCCTGCCCTGTCGCTGTCAGACGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGGCTGCAAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 72 bp | CGGCGAGCGGCGGGGCAAGAGCCTTGGGCGGCCAGTTaGCGTACGAGTAGCCGGGGTACACCTCCTCGTAGG | + |
Preference number: 6 (lower is better) Translates to: RRAAGQEPWAAS*RTSSRGTPPRR Trigger: CCTACGAGGAGGTGTACCCCGGCTACTCGTACGGCAACTGGCCGCCCAAGGCTCTTGCCCCGCCGCTCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 72 bp | CTGTGCTCCTGGCCCTTGCAGCCGTGCTCTGGGAGCTaGGGGTGCGGAGTGCCAGCGTCTGACAGCGACAGG | + |
Preference number: 6 (lower is better) Translates to: LCSWPLQPCSGS*GCGVPASDSDR Trigger: CCTGTCGCTGTCAGACGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CAA 90 bp | GCCAGAGGCCCCACGTTGACCGAGTTGAAGGCGAATGGAAAGGTCTaGGCGGCGAGCGGCGGGGCAAGAGCCTTGGGCGGCCAGTTGCCG | + |
Preference number: 6 (lower is better) Translates to: ARGPTLTELKANGKV*AASGGARALGGQLP Trigger: CGGCAACTGGCCGCCCAAGGCTCTTGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCGCCTTCAACTCGGTCAACGTGGGGCCTCTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 72 bp | CCTTTCCACGGCGTACTGGCACGGACTAAGGTTGGCTaGCGGGGGCGGCCCGTGCACAGCGGGGTAGCTGAA | + |
Preference number: 6 (lower is better) Translates to: PFHGVLARTKVG*RGRPVHSGVAE Trigger: TTCAGCTACCCCGCTGTGCACGGGCCGCCCCCGGCAGCCAACCTTAGTCCGTGCCAGTACGCCGTGGAAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 72 bp | GAAAGGTCTTGGCGGCGAGCGGCGGGGCAAGAGCCTTaGGCGGCCAGTTGCCGTACGAGTAGCCGGGGTACA | + |
Preference number: 6 (lower is better) Translates to: ERSWRRAAGQEP*AASCRTSSRGT Trigger: TGTACCCCGGCTACTCGTACGGCAACTGGCCGCCCAAGGCTCTTGCCCCGCCGCTCGCCGCCAAGACCTTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 72 bp | CTGCCGCCGCTGCTTCTTTTTCAGCGAACCGTCCTCTaGGGAGCCGCCGGGCAGCGAAGCCGAGGCCTTTTC | + |
Preference number: 6 (lower is better) Translates to: LPPLLLFQRTVL*GAAGQRSRGLF Trigger: GAAAAGGCCTCGGCTTCGCTGCCCGGCGGCTCCCCAGAGGACGGTTCGCTGAAAAAGAAGCAGCGGCGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CAA 72 bp | CCCACGTTGACCGAGTTGAAGGCGAATGGAAAGGTCTaGGCGGCGAGCGGCGGGGCAAGAGCCTTGGGCGGC | + |
Preference number: 6 (lower is better) Translates to: PTLTELKANGKV*AASGGARALGG Trigger: GCCGCCCAAGGCTCTTGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCGCCTTCAACTCGGTCAACGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS GCA 72 bp | TTTTCTGAGTCGCTGTGCTCCTGGCCCTTGCAGCCGTaGTCTGGGAGCTGGGGGTGCGGAGTGCCAGCGTCT | + |
Preference number: 6 (lower is better) Translates to: FSESLCSWPLQP*SGSWGCGVPAS Trigger: AGACGCTGGCACTCCGCACCCCCAGCTCCCAGAGCACGGCTGCAAGGGCCAGGAGCACAGCGACTCAGAAAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CCA 72 bp | AGCCAGAGGCCCCACGTTGACCGAGTTGAAGGCGAATaGAAAGGTCTTGGCGGCGAGCGGCGGGGCAAGAGC | + |
Preference number: 6 (lower is better) Translates to: SQRPHVDRVEGE*KGLGGERRGKS Trigger: GCTCTTGCCCCGCCGCTCGCCGCCAAGACCTTTCCATTCGCCTTCAACTCGGTCAACGTGGGGCCTCTGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |
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CDS CAA 72 bp | ACGGGCTGCGAAGCCAGAGGCCCCACGTTGACCGAGTaGAAGGCGAATGGAAAGGTCTTGGCGGCGAGCGGC | + |
Preference number: 6 (lower is better) Translates to: TGCEARGPTLTE*KANGKVLAASG Trigger: GCCGCTCGCCGCCAAGACCTTTCCATTCGCCTTCAACTCGGTCAACGTGGGGCCTCTGGCTTCGCAGCCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370002.8 ENST00000539804.1 |