RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PITPNM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000090975

Ensembl transcript IDs: ENST00000280562.9, ENST00000320201.10, ENST00000320201.9, ENST00000436074.6, ENST00000451868.2, ENST00000535289.1, ENST00000541244.1, ENST00000542210.1, ENST00000546049.5

Found 665 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCCGCCGGAGCTGGCCGTTGAGCGCCACAGCCAAGGTCACGCTTaGTGCTGGGGAGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: GPPELAVERHSQGHA*CWGERADGQTQRAG
Trigger: TCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCTCCCCAGCACCAAGCGTGACCTTGGCTGTGGCGCTCAACGGCCAGCTCCGGCGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp CCCACTTCCGGGAAAGCCGAGGAGCAGCAGAGGGGCCGCCGGAGCTaGCCGTTGAGCGCCACAGCCAAGGTCACGCTTGGTGCTGGGGAG +
Preference number: 1 (lower is better)
Translates to: PTSGKAEEQQRGRRS*PLSATAKVTLGAGE
Trigger: CTCCCCAGCACCAAGCGTGACCTTGGCTGTGGCGCTCAACGGCCAGCTCCGGCGGCCCCTCTGCTGCTCCTCGGCTTTCCCGGAAGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR TCA 90 bp TGGTCCCTCTGCCATCCTGGGGCTGGTGGTCCCTGCCAGCTTCCATaGCAAGCCGGACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: WSLCHPGAGGPCQLP*QAGPVRPEDVRQGR
Trigger: CCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGTCCGGCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp GGCAGGGAGCACTGTGTGGTGCGGCCCGTGTCCTCCACAAGGCCCTaGGACAATCTCCCAGGCCCACGTCAGTGCGTGTGCCCAGGCCAG +
Preference number: 1 (lower is better)
Translates to: GREHCVVRPVSSTRP*DNLPGPRQCVCPGQ
Trigger: CTGGCCTGGGCACACGCACTGACGTGGGCCTGGGAGATTGTCCCAGGGCCTTGTGGAGGACACGGGCCGCACCACACAGTGCTCCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp TGCTACCAAATGGGAGGGGACCTGGGAGTGAGGGTGGCCAGTGGATaGGGAGGTGGCAGGCTGCGCCTGGGCCCACACCTGGCACCAGGA +
Preference number: 1 (lower is better)
Translates to: CYQMGGDLGVRVASG*GGGRLRLGPHLAPG
Trigger: TCCTGGTGCCAGGTGTGGGCCCAGGCGCAGCCTGCCACCTCCCCATCCACTGGCCACCCTCACTCCCAGGTCCCCTCCCATTTGGTAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp GGCCAGTCTGAGTGGGAGGTTCTGGTCCCTCTGCCATCCTGGGGCTaGTGGTCCCTGCCAGCTTCCATGACAAGCCGGACCCGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: GQSEWEVLVPLPSWG*WSLPASMTSRTRQA
Trigger: GGCCTGACGGGTCCGGCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp CTCCCGGGCCAGTCTGAGTGGGAGGTTCTGGTCCCTCTGCCATCCTaGGGCTGGTGGTCCCTGCCAGCTTCCATGACAAGCCGGACCCGT +
Preference number: 1 (lower is better)
Translates to: LPGQSEWEVLVPLPS*GWWSLPASMTSRTR
Trigger: ACGGGTCCGGCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp CAGTCTGAGTGGGAGGTTCTGGTCCCTCTGCCATCCTGGGGCTGGTaGTCCCTGCCAGCTTCCATGACAAGCCGGACCCGTCAGGCCCGA +
Preference number: 1 (lower is better)
Translates to: QSEWEVLVPLPSWGW*SLPASMTSRTRQAR
Trigger: TCGGGCCTGACGGGTCCGGCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp GAGGTGGCAGGCTGCGCCTGGGCCCACACCTGGCACCAGGACACTTaGAGATCCACACAGGGCAAAATGTCTGGGAGAACCTCCCGGGCC +
Preference number: 1 (lower is better)
Translates to: EVAGCAWAHTWHQDT*RSTQGKMSGRTSRA
Trigger: GGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGTGTGGATCTCCAAGTGTCCTGGTGCCAGGTGTGGGCCCAGGCGCAGCCTGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 90 bp AGAAATTCAGTGGGATTGCCGGGGCCAGGTGAGGCAAGGAGCCCATaGCTCGCTAAGTGGGCAGGAGCAGGGCCCACGGGACCCAGAACC +
Preference number: 1 (lower is better)
Translates to: RNSVGLPGPGEARSP*LAKWAGAGPTGPRT
Trigger: GGTTCTGGGTCCCGTGGGCCCTGCTCCTGCCCACTTAGCGAGGCATGGGCTCCTTGCCTCACCTGGCCCCGGCAATCCCACTGAATTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp TCGCTAAGTGGGCAGGAGCAGGGCCCACGGGACCCAGAACCAGGCTaGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTGGAGGGGCTGC +
Preference number: 1 (lower is better)
Translates to: SLSGQEQGPRDPEPG*TPSQCWVFSVWRGC
Trigger: GCAGCCCCTCCACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTGGGCCCTGCTCCTGCCCACTTAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp CACACAGGGCAAAATGTCTGGGAGAACCTCCCGGGCCAGTCTGAGTaGGAGGTTCTGGTCCCTCTGCCATCCTGGGGCTGGTGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: HTGQNVWENLPGQSE*EVLVPLPSWGWWSL
Trigger: CAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR TCA 90 bp GATCCACACAGGGCAAAATGTCTGGGAGAACCTCCCGGGCCAGTCTaGGTGGGAGGTTCTGGTCCCTCTGCCATCCTGGGGCTGGTGGTC +
Preference number: 1 (lower is better)
Translates to: DPHRAKCLGEPPGPV*VGGSGPSAILGLVV
Trigger: GACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGTGTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp CTGGGGAGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATaGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTG +
Preference number: 1 (lower is better)
Translates to: LGREGRRSDPACRTA*SLFRREMKSWLPAL
Trigger: CAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp CACCTGGCACCAGGACACTTGGAGATCCACACAGGGCAAAATGTCTaGGAGAACCTCCCGGGCCAGTCTGAGTGGGAGGTTCTGGTCCCT +
Preference number: 1 (lower is better)
Translates to: HLAPGHLEIHTGQNV*ENLPGQSEWEVLVP
Trigger: AGGGACCAGAACCTCCCACTCAGACTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGTGTGGATCTCCAAGTGTCCTGGTGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 90 bp GAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTaGTACCAAATGGGAGGGGACCTGGGAGTGAGGGTGGCCAGTGGA +
Preference number: 1 (lower is better)
Translates to: EKLELTRCRLDPCWS*YQMGGDLGVRVASG
Trigger: TCCACTGGCCACCCTCACTCCCAGGTCCCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp ACAGTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTaGAGCTGCTACCAAATGGGAGGGGACCTGGGAGTGAGGGTGGCC +
Preference number: 1 (lower is better)
Translates to: TVEKLELTRCRLDPC*SCYQMGGDLGVRVA
Trigger: GGCCACCCTCACTCCCAGGTCCCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 90 bp AGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTTaGACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTTGTAGGT +
Preference number: 1 (lower is better)
Translates to: RVRGAEIKIQPFSPA*TRLCRTGAFSVVVG
Trigger: ACCTACAACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 90 bp GCAGAAATTAAGATACAGCCTTTCTCTCCTGCTTGCACGAGGCTCTaGCGCACTGGAGCCTTCAGTGTGGTTGTAGGTCCTGGGTCAGCA +
Preference number: 1 (lower is better)
Translates to: AEIKIQPFSPACTRL*RTGAFSVVVGPGSA
Trigger: TGCTGACCCAGGACCTACAACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGCTGTATCTTAATTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 90 bp TTGGCTGTACATATCTACACACGGGAAAAAGTTAACATCACTCTGTaGACCTCCCCAGCCCGGTCCATGCGTCCCAACACCAGACCCAGG +
Preference number: 1 (lower is better)
Translates to: LAVHIYTREKVNITL*TSPARSMRPNTRPR
Trigger: CCTGGGTCTGGTGTTGGGACGCATGGACCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR TCA 90 bp AGTCAGCAAGGCCTGCCTCACCCTTTGGTTATGACTGGTCAGGCCTaGGCCCTGCAGCTCAGCACCCAACTCTGTAAACATTTTTGGTAT +
Preference number: 1 (lower is better)
Translates to: SQQGLPHPLVMTGQA*ALQLSTQLCKHFWY
Trigger: ATACCAAAAATGTTTACAGAGTTGGGTGCTGAGCTGCAGGGCTCAGGCCTGACCAGTCATAACCAAAGGGTGAGGCAGGCCTTGCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 90 bp GACAGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTaGCCTGAAGCTGACAAAGCAAGTTGTGGCTTCTTAGATTCGGCA +
Preference number: 1 (lower is better)
Translates to: DSMVLVQARNEVMAA*PEADKASCGFLDSA
Trigger: TGCCGAATCTAAGAAGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 90 bp TCACTCTGTATAGACCCACTTTTGCAGAACATTTACACGACCCTTTaGCTGTACATATCTACACACGGGAAAAAGTTAACATCACTCTGT +
Preference number: 1 (lower is better)
Translates to: SLCIDPLLQNIYTTL*LYISTHGKKLTSLC
Trigger: ACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTCTGCAAAAGTGGGTCTATACAGAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCGCCTCCTGGCGGGGCTaGCCACCCTGGCCTAGCACC +
Preference number: 2 (lower is better)
Translates to: TRQARGREAGQGALCGAAASWRG*PPWPST
Trigger: GGTGCTAGGCCAGGGTGGCCAGCCCCGCCAGGAGGC...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCCCTGGCCTAGCACCATaGAGACCCCGCGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: TRQARGREAGQGALCGAAPGLAP*RPRAAL
Trigger: GAGTGCAGCGCGGGGTCTCCATGGTGCTAGGCCAGG...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAAGTGGGCGGGCGGCCTTaGCTGATGGCAGGGAGCGGA +
Preference number: 2 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQVGGRP*LMAGSG
Trigger: TCCGCTCCCTGCCATCAGTCAAGGCCGCCCGCCCAC...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CAA 90 bp TTGCCATCTATGGCTGAGGGCCGCTGGGAGAGCCCCAGGGGACTATaGCTGTTGTCCTTGGCATGGCTGGCGGCTGGGCAGGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: LPSMAEGRWESPRGL*LLSLAWLAAGQAGG
Trigger: CCCGCCTGCCTGCCCAGCCGCCAGCCATGCCAAGGACAACAGCAATAGTCCCCTGGGGCTCTCCCAGCGGCCCTCAGCCATAGATGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGCCACGTCAGTGCGTGTaGCCAGGCCAGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGPRQCV*PGQASW
Trigger: CCAGGAGGCCTGGCCTGGGCACACGCACTGACGTGG...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGGGGAGGTGGCAGGCTaGGCCTGGGCCCACACCTGG +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWSLFRGEVAG*AWAHTW
Trigger: CCAGGTGTGGGCCCAGGCGCAGCCTGCCACCTCCCC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGCCTCCTGGCGGGGCTaGCCACCCTGGCCTAGCACC +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWSLFRASWRG*PPWPST
Trigger: GGTGCTAGGCCAGGGTGGCCAGCCCCGCCAGGAGGC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CAA 90 bp GGAGGTGGCAGGCTGCGCCTGGGCCCACACCTGGCACCAGGACACTaGGAGATCCACACAGGGCAAAATGTCTGGGAGAACCTCCCGGGC +
Preference number: 2 (lower is better)
Translates to: GGGRLRLGPHLAPGH*EIHTGQNVWENLPG
Trigger: GCCCGGGAGGTTCTCCCAGACATTTTGCCCTGTGTGGATCTCCAAGTGTCCTGGTGCCAGGTGTGGGCCCAGGCGCAGCCTGCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGTGGGCGGGCGGCCTTaGCTGATGGCAGGGAGCGGA +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGVGGRP*LMAGSG
Trigger: TCCGCTCCCTGCCATCAGTCAAGGCCGCCCGCCCAC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCAGGCCCACGTCAGTaGGTGTGCCCAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWSLFRPGPRQ*VCPGQA
Trigger: GGCCTGGCCTGGGCACACGCACTGACGTGGGCCTGG...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGCCATGCCTCGCTAAGTaGGCAGGAGCAGGGCCCACG +
Preference number: 2 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGPCLAK*AGAGPT
Trigger: CGTGGGCCCTGCTCCTGCCCACTTAGCGAGGCATGG...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCCCTGCCAGCTTCCATaGCAAGCCGGACCCGTCAGG +
Preference number: 2 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGPCQLP*QAGPVR
Trigger: CCTGACGGGTCCGGCTTGTCATGGAAGCTGGCAGGG...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGCGGGCGGCCTTGACTaGTGGCAGGGAGCGGAAGAG +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWSLFRAGGLD*WQGAEE
Trigger: CTCTTCCGCTCCCTGCCATCAGTCAAGGCCGCCCGC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGCCGGAGCTGGCCGTTaGGCGCCACAGCCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGAGAGR*APQPRS
Trigger: TGACCTTGGCTGTGGCGCTCAACGGCCAGCTCCGGC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTCTTGCCATCTATGGCTaGGGGCCGCTGGGAGAGCCC +
Preference number: 2 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKALAIYG*GPLGEP
Trigger: GGGCTCTCCCAGCGGCCCTCAGCCATAGATGGCAAG...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTGAAACAACACTGGCCTaGGCTCCAGGCGGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKAETTLA*APGGAG
Trigger: GCCTGCCCCGCCTGGAGCCCAGGCCAGTGTTGTTTC...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCCTGCCAGCTTCCATaGCAAGCCGGACCCGTCAGG +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWSLFRPCQLP*QAGPVR
Trigger: CCTGACGGGTCCGGCTTGTCATGGAAGCTGGCAGGG...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCGGGAGCACTGTGTGGTaGGGCCCGTGTCCTCCACAA +
Preference number: 2 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGGSTVW*GPCPPQ
Trigger: TTGTGGAGGACACGGGCCGCACCACACAGTGCTCCC...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTGGGGAGGTGGCAGGCTaGGCCTGGGCCCACACCTGG +
Preference number: 2 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAGEVAG*AWAHTW
Trigger: CCAGGTGTGGGCCCAGGCGCAGCCTGCCACCTCCCC...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGCCTGGCCTAGCACCATaGAGACCCCGCGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGPGLAP*RPRAAL
Trigger: GAGTGCAGCGCGGGGTCTCCATGGTGCTAGGCCAGG...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAATCCTCCACAAGGCCCTaGGACAATCTCCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQSSTRP*DNLPGP
Trigger: TGGGCCTGGGAGATTGTCCCAGGGCCTTGTGGAGGA...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGCAGGGAGCACTGTGTaGTGCGGCCCGTGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGAGSTV*CGPCPP
Trigger: TGGAGGACACGGGCCGCACCACACAGTGCTCCCTGC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTCTGCCATCCTGGGGCTaGTGGTCCCTGCCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGLPSWG*WSLPAS
Trigger: GGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAG...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTCCGGGCCAGTCTGAGTaGGAGGTTCTGGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKAPGQSE*EVLVPL
Trigger: CAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGG...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTACAGAGCCTGGTCGCTaGACAAAGGCCGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKATEPGR*TKAEAR
Trigger: CCTGGCCTCGGCCTTTGTCCAGCGACCAGGCTCTGT...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGATGACTGGTCAGGCCTaGGCCCTGCAGCTCAGCACC +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGMTGQA*ALQLST
Trigger: GGTGCTGAGCTGCAGGGCTCAGGCCTGACCAGTCAT...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGTGGCAGGCTGCGCCTaGGCCCACACCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGVAGCA*AHTWHQ
Trigger: CTGGTGCCAGGTGTGGGCCCAGGCGCAGCCTGCCAC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTGCTTCTCTGGATGGCTaGTCTCCCAGGCAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKAASLDG*SPRQQA
Trigger: TGCCTGCTGCCTGGGAGACCAGCCATCCAGAGAAGC...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGTGTTCAGGCGAGAAATaGAGTCATGGCTGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGCSGEK*SHGCLP
Trigger: GGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACA...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCGACCCCTGTTGGAGCTaGTACCAAATGGGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGDPCWS*YQMGGD
Trigger: GTCCCCTCCCATTTGGTAGCAGCTCCAACAGGGGTC...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGCTTGCACGAGGCTCTaGCGCACTGGAGCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWSLFRACTRL*RTGAFS
Trigger: ACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGCTGAGTGGGAGGTTCTaGTCCCTCTGCCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGLSGRF*SLCHPG
Trigger: CCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAG...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCGAGGCTCTGCCGCACTaGAGCCTTCAGTGTGGTTGT +
Preference number: 2 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGEALPH*SLQCGC
Trigger: ACAACCACACTGAAGGCTCCAGTGCGGCAGAGCCTC...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGACCCAGAACCAGGCTaGACTCCGTCACAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGDPEPG*TPSQCW
Trigger: CCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACTCGAGTTAACAAGATaGAGGCTGGACCCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGLELTR*RLDPCW
Trigger: CCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAG...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGAAAAACCGAAGTGTGTaGCCCACCCACCCCAGAGTA +
Preference number: 2 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGKNRSV*PTHPRV
Trigger: TACTCTGGGGTGGGTGGGGCACACACTTCGGTTTTT...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGGAAGTCATGGCTGCCTaGCCTGAAGCTGACAAAGCA +
Preference number: 2 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGEVMAA*PEADKA
Trigger: TGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTC...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTCGAGACTCTTCCAGGTaGTTCTCTGGATGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKARDSSR*FSGWLV
Trigger: GACCAGCCATCCAGAGAAGCACCTGGAAGAGTCTCG...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGCCCCAGGGGACTATTaGTGTTGTCCTTGGCATGGC +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGAPGDY*CCPWHG
Trigger: GCCATGCCAAGGACAACAGCAATAGTCCCCTGGGGC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTGCAGGGAGCACTGTGTaGTGCGGCCCGTGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAAGSTV*CGPCPP
Trigger: TGGAGGACACGGGCCGCACCACACAGTGCTCCCTGC...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CAA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTaGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWS*FRREMKSWLPALKL
Trigger: CAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTCCTTTCTCTCCTGCTTaGACGAGGCTCTGCCGCACT +
Preference number: 2 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCPFSPA*TRLCRT
Trigger: AGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGG...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTGGACTCCGTCACAGTaGTGGGTGTTTTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKAWTPSQ*WVFSVW
Trigger: CCACACTGAAAACACCCAGCACTGTGACGGAGTCCA...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGCGAGACTCTTCCAGGTaGTTCTCTGGATGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGRDSSR*FSGWLV
Trigger: GACCAGCCATCCAGAGAAGCACCTGGAAGAGTCTCG...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCAGGCTGCGCCTaGGCCCACACCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: FRREMKSWLPALKLTKQVVAGCA*AHTWHQ
Trigger: CTGGTGCCAGGTGTGGGCCCAGGCGCAGCCTGCCAC...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGCGGGCGGCCTTGACTaGTGGCAGGGAGCGGAAGAG +
Preference number: 2 (lower is better)
Translates to: FRREMKSWLPALKLTKQVAGGLD*WQGAEE
Trigger: CTCTTCCGCTCCCTGCCATCAGTCAAGGCCGCCCGC...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGAAAAACCGAAGTGTGTaGCCCACCCACCCCAGAGTA +
Preference number: 2 (lower is better)
Translates to: REGRRSDPACRTAWSLFRKNRSV*PTHPRV
Trigger: TACTCTGGGGTGGGTGGGGCACACACTTCGGTTTTT...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAAGGGGCCGCCGGAGCTaGCCGTTGAGCGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQRGRRS*PLSATA
Trigger: GGCTGTGGCGCTCAACGGCCAGCTCCGGCGGCCCCT...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTGGGAGCACTGTGTGGTaGGGCCCGTGTCCTCCACAA +
Preference number: 2 (lower is better)
Translates to: REMKSWLPALKLTKQVVAGSTVW*GPCPPQ
Trigger: TTGTGGAGGACACGGGCCGCACCACACAGTGCTCCC...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGCTGCCATCCTGGGGCTaGTGGTCCCTGCCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVLPSWG*WSLPAS
Trigger: GGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAG...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTCCCTCTGCCATCCTaGGGCTGGTGGTCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: FRREMKSWLPALKLTKQVVPLPS*GWWSLP
Trigger: TGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGAC...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCACCACGTCAGTGCGTGTaGCCAGGCCAGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LPLLVSERLVLPQEENVPPRQCV*PGQASW
Trigger: CCAGGAGGCCTGGCCTGGGCACACGCACTGACGTGG...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGAGGTTCTGGTCCCTCTaGCATCCTGGGGCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: HIYTREKVNITLCTSPARRFWSL*HPGAGG
Trigger: ACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCT...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGCCATCCTGGGGCTGGTaGTCCCTGCCAGCTTCCATG +
Preference number: 2 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVPSWGW*SLPASM
Trigger: CATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGG...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCACCCCAGCCCGGTCCATaGGTCCCAACACCAGACCCA +
Preference number: 2 (lower is better)
Translates to: LPLLVSERLVLPQEENVPPQPGP*VPTPDP
Trigger: TGGGTCTGGTGTTGGGACGCATGGACCGGGCTGGGG...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGGCTGGAAACAACACTaGCCTGGGCTCCAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQGWKQH*PGLQAG
Trigger: CCCCGCCTGGAGCCCAGGCCAGTGTTGTTTCCAGCC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACAGGGGCCGCCGGAGCTaGCCGTTGAGCGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNRGRRS*PLSATA
Trigger: GGCTGTGGCGCTCAACGGCCAGCTCCGGCGGCCCCT...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGTGAGGTTGAACAGTTaGGAAACTCGAGTTAACAAG +
Preference number: 2 (lower is better)
Translates to: AWGCGGSGTKASILTGLGVRLNS*ETRVNK
Trigger: CTTGTTAACTCGAGTTTCTCAACTGTTCAACCTCAC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAGTCCAGCCCGTGGCCTaGGGCTGGAAACAACACTGG +
Preference number: 2 (lower is better)
Translates to: LPLLVSERLVLPQEENVPVQPVA*GWKQHW
Trigger: CCAGTGTTGTTTCCAGCCTCAGGCCACGGGCTGGAC...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTCCTTTCTCTCCTGCTTaGACGAGGCTCTGCCGCACT +
Preference number: 2 (lower is better)
Translates to: FRREMKSWLPALKLTKQVPFSPA*TRLCRT
Trigger: AGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGG...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTACAGCCTTTCTCTCCTaGTTGCACGAGGCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: FRREMKSWLPALKLTKQVTAFLS*LHEALP
Trigger: CGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGCTGT...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTTGGACTCCGTCACAGTaGTGGGTGTTTTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: SMVLVQARNEVMAACPEAWTPSQ*WVFSVW
Trigger: CCACACTGAAAACACCCAGCACTGTGACGGAGTCCA...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTACAGGGCAAAATGTCTaGGAGAACCTCCCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: FRREMKSWLPALKLTKQVTGQNV*ENLPGQ
Trigger: CTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGT...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAACTCGGGGACAGAGCCTaGTCGCTGGACAAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQLGDRA*SLDKGR
Trigger: TCGGCCTTTGTCCAGCGACCAGGCTCTGTCCCCGAG...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTTGTCCTTGGCATGGCTaGCGGCTGGGCAGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: VFLKDAALPLLVSERLVLCPWHG*RLGRQA
Trigger: CGCCTGCCTGCCCAGCCGCCAGCCATGCCAAGGACA...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGAGGCTGGACCCCTGTTaGAGCTGCTACCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVRLDPC*SCYQMG
Trigger: TCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCT...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTAGAGTAGAAATTCAGTaGGATTGCCGGGGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: REMKSWLPALKLTKQVVARVEIQ*DCRGQV
Trigger: CACCTGGCCCCGGCAATCCCACTGAATTTCTACTCT...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAAGCCAAGGTCACGCTTaGTGCTGGGGAGAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQSQGHA*CWGERA
Trigger: TGCCCTCTCTCCCCAGCACCAAGCGTGACCTTGGCT...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGTTAACATCACTCTGTaGACCTCCCCAGCCCGGTCC +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQVNITL*TSPARS
Trigger: GGACCGGGCTGGGGAGGTGCACAGAGTGATGTTAAC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCCATGCCTCGCTAAGTaGGCAGGAGCAGGGCCCACG +
Preference number: 2 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNPCLAK*AGAGPT
Trigger: CGTGGGCCCTGCTCCTGCCCACTTAGCGAGGCATGG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACGTCCAGCCCGTGGCCTaGGGCTGGAAACAACACTGG +
Preference number: 2 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNVQPVA*GWKQHW
Trigger: CCAGTGTTGTTTCCAGCCTCAGGCCACGGGCTGGAC...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCTGAGTGGGAGGTTCTaGTCCCTCTGCCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: VFLKDAALPLLVSERLVLLSGRF*SLCHPG
Trigger: CCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAG...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAGGCTGGACCCCTGTTaGAGCTGCTACCAAATGGGA +
Preference number: 2 (lower is better)
Translates to: LPLLVSERLVLPQEENVPRLDPC*SCYQMG
Trigger: TCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCT...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCTCGGGGACAGAGCCTaGTCGCTGGACAAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNLGDRA*SLDKGR
Trigger: TCGGCCTTTGTCCAGCGACCAGGCTCTGTCCCCGAG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACAGGTTCTGGTCCCTCTaGCATCCTGGGGCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNRFWSL*HPGAGG
Trigger: ACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCT...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAACTCGAGTTAACAAGATaGAGGCTGGACCCCTGTTGG +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQLELTR*RLDPCW
Trigger: CCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAG...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGAACAGGGCAAAATGTCTaGGAGAACCTCCCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LLVSERLVLPQEENVPKGTGQNV*ENLPGQ
Trigger: CTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGT...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAGAGTAGAAATTCAGTaGGATTGCCGGGGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: LPLLVSERLVLPQEENVPRVEIQ*DCRGQV
Trigger: CACCTGGCCCCGGCAATCCCACTGAATTTCTACTCT...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGAAGGTGCTTCTCTGGATaGCTGGTCTCCCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: LLVSERLVLPQEENVPKGRCFSG*LVSQAA
Trigger: TGCTGCCTGGGAGACCAGCCATCCAGAGAAGCACCT...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAATGGGTCAGCAGGTACTaGGTTTCATGCATGTCAACG +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQWVSRY*VSCMST
Trigger: CGTTGACATGCATGAAACTCAGTACCTGCTGACCCA...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR GCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACGACCCCTGTTGGAGCTaGTACCAAATGGGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNDPCWS*YQMGGD
Trigger: GTCCCCTCCCATTTGGTAGCAGCTCCAACAGGGGTC...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTGGTGGAAAGCAGACCTaGATACAGAAGAGACTTCCC +
Preference number: 2 (lower is better)
Translates to: VFLKDAALPLLVSERLVLGGKQT*IQKRLP
Trigger: GGGAAGTCTCTTCTGTATCCAGGTCTGCTTTCCACC...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAAATATGAATAAACCCTaGAGGTTCCATCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LKDAALPLLVSERLVLPQNMNKP*RFHPSR
Trigger: TCTGGAGGGATGGAACCTTCAGGGTTTATTCATATT...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTGAATCTGAAGGGAGGTaGAAAGCAGACCTGGATACA +
Preference number: 2 (lower is better)
Translates to: VFLKDAALPLLVSERLVLESEGR*KADLDT
Trigger: TGTATCCAGGTCTGCTTTCCACCTCCCTTCAGATTC...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGAAATATGAATAAACCCTaGAGGTTCCATCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LLVSERLVLPQEENVPKGNMNKP*RFHPSR
Trigger: TCTGGAGGGATGGAACCTTCAGGGTTTATTCATATT...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CAA 90 bp TTCACTCTGTATAGACCCACTTTTGCAGAACATTTACACGACCCTTaGGCTGTACATATCTACACACGGGAAAAAGTTAACATCACTCTG +
Preference number: 2 (lower is better)
Translates to: FTLYRPTFAEHLHDP*AVHIYTREKVNITL
Trigger: CAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTCTGCAAAAGTGGGTCTATACAGAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR TCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACGTGAGGTTGAACAGTTaGGAAACTCGAGTTAACAAG +
Preference number: 2 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNVRLNS*ETRVNK
Trigger: CTTGTTAACTCGAGTTTCTCAACTGTTCAACCTCAC...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTATTTACACGACCCTTTaGCTGTACATATCTACACAC +
Preference number: 2 (lower is better)
Translates to: VFLKDAALPLLVSERLVLIYTTL*LYISTH
Trigger: GTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAAT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR TCA 72 bp GCGGAAGAGGCGGCCAGGCCCGTCCAGCCCGTGGCCTaGGGCTGGAAACAACACTGGCCTGGGCTCCAGGCG +
Preference number: 3 (lower is better)
Translates to: AEEAARPVQPVA*GWKQHWPGLQA
Trigger: CGCCTGGAGCCCAGGCCAGTGTTGTTTCCAGCCTCAGGCCACGGGCTGGACGGGCCTGGCCGCCTCTTCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp GGGCCAGGTGAGGCAAGGAGCCCATGCCTCGCTAAGTaGGCAGGAGCAGGGCCCACGGGACCCAGAACCAGG +
Preference number: 3 (lower is better)
Translates to: GPGEARSPCLAK*AGAGPTGPRTR
Trigger: CCTGGTTCTGGGTCCCGTGGGCCCTGCTCCTGCCCACTTAGCGAGGCATGGGCTCCTTGCCTCACCTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACGCCGGAGCTGGCCGTaGAGCGCCACAGCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGRRSWP*SATAKV
Trigger: GACCTTGGCTGTGGCGCTCAACGGCCAGCTCCGGCG...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR TCA 72 bp TGCCATCCTGGGGCTGGTGGTCCCTGCCAGCTTCCATaGCAAGCCGGACCCGTCAGGCCCGAGGACGTGAGG +
Preference number: 3 (lower is better)
Translates to: CHPGAGGPCQLP*QAGPVRPEDVR
Trigger: CCTCACGTCCTCGGGCCTGACGGGTCCGGCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 72 bp TGGCTGAGGGCCGCTGGGAGAGCCCCAGGGGACTATTaGTGTTGTCCTTGGCATGGCTGGCGGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: WLRAAGRAPGDY*CCPWHGWRLGR
Trigger: CCTGCCCAGCCGCCAGCCATGCCAAGGACAACAGCAATAGTCCCCTGGGGCTCTCCCAGCGGCCCTCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCGTGGGCGGGCGGCCTaGACTGATGGCAGGGAGCGG +
Preference number: 3 (lower is better)
Translates to: REGRRSDPACRTAWSLFRRGRAA*TDGRER
Trigger: CCGCTCCCTGCCATCAGTCAAGGCCGCCCGCCCACG...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 72 bp TCCCGGGCCAGTCTGAGTGGGAGGTTCTGGTCCCTCTaGCATCCTGGGGCTGGTGGTCCCTGCCAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: SRASLSGRFWSL*HPGAGGPCQLP
Trigger: TGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp CACTGTGTGGTGCGGCCCGTGTCCTCCACAAGGCCCTaGGACAATCTCCCAGGCCCACGTCAGTGCGTGTGC +
Preference number: 3 (lower is better)
Translates to: HCVVRPVSSTRP*DNLPGPRQCVC
Trigger: GCACACGCACTGACGTGGGCCTGGGAGATTGTCCCAGGGCCTTGTGGAGGACACGGGCCGCACCACACAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp GTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTaGACAAAGGCCGAGGCCAGGCAGGCTCTCCCACTT +
Preference number: 3 (lower is better)
Translates to: VGRSFSGTEPGR*TKAEARQALPL
Trigger: AAGTGGGAGAGCCTGCCTGGCCTCGGCCTTTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp TGGGAGGTTCTGGTCCCTCTGCCATCCTGGGGCTGGTaGTCCCTGCCAGCTTCCATGACAAGCCGGACCCGT +
Preference number: 3 (lower is better)
Translates to: WEVLVPLPSWGW*SLPASMTSRTR
Trigger: ACGGGTCCGGCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp GAGTGGGAGGTTCTGGTCCCTCTGCCATCCTGGGGCTaGTGGTCCCTGCCAGCTTCCATGACAAGCCGGACC +
Preference number: 3 (lower is better)
Translates to: EWEVLVPLPSWG*WSLPASMTSRT
Trigger: GGTCCGGCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp GGGCAGGAGCAGGGCCCACGGGACCCAGAACCAGGCTaGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTGG +
Preference number: 3 (lower is better)
Translates to: GQEQGPRDPEPG*TPSQCWVFSVW
Trigger: CCACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTGGGCCCTGCTCCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 72 bp CTGAGCCCACTGCCCACAGGGCCTCCCGGCCTTTATTaGAGGAGGGCCCGAGACTCTTCCAGGTGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: LSPLPTGPPGLY*RRARDSSRCFS
Trigger: AGAGAAGCACCTGGAAGAGTCTCGGGCCCTCCTGCAATAAAGGCCGGGAGGCCCTGTGGGCAGTGGGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAGGCTGGACCCCTGTaGGAGCTGCTACCAAATGGG +
Preference number: 3 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGQAGPL*ELLPNG
Trigger: CCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTG...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR TCA 72 bp AGGGCAAAATGTCTGGGAGAACCTCCCGGGCCAGTCTaGGTGGGAGGTTCTGGTCCCTCTGCCATCCTGGGG +
Preference number: 3 (lower is better)
Translates to: RAKCLGEPPGPV*VGGSGPSAILG
Trigger: CCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR TCA 72 bp GTGGCAGTCAGCAAGGCCTGCCTCACCCTTTGGTTATaGCTGGTCAGGCCTGAGCCCTGCAGCTCAGCACCC +
Preference number: 3 (lower is better)
Translates to: VAVSKACLTLWL*LVRPEPCSSAP
Trigger: GGGTGCTGAGCTGCAGGGCTCAGGCCTGACCAGTCATAACCAAAGGGTGAGGCAGGCCTTGCTGACTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 72 bp GGCCTTTATTGCAGGAGGGCCCGAGACTCTTCCAGGTaGTTCTCTGGATGGCTGGTCTCCCAGGCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: GLYCRRARDSSR*FSGWLVSQAAG
Trigger: GCCTGCTGCCTGGGAGACCAGCCATCCAGAGAAGCACCTGGAAGAGTCTCGGGCCCTCCTGCAATAAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 72 bp ACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTaGCTCCCGCGGGGCCATCTTGTCGGCCACGGCCAC +
Preference number: 3 (lower is better)
Translates to: TKTVLLDTLSSA*LPRGHLVGHGH
Trigger: GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
3UTR CCA 72 bp CAGTCTGAGTGGGAGGTTCTGGTCCCTCTGCCATCCTaGGGCTGGTGGTCCCTGCCAGCTTCCATGACAAGC +
Preference number: 3 (lower is better)
Translates to: QSEWEVLVPLPS*GWWSLPASMTS
Trigger: GCTTGTCATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp CAAAATGTCTGGGAGAACCTCCCGGGCCAGTCTGAGTaGGAGGTTCTGGTCCCTCTGCCATCCTGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: QNVWENLPGQSE*EVLVPLPSWGW
Trigger: CCAGCCCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGGGAGGTTCTCCCAGACATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp AGGCTGCCCACCTTGCCATCTATGGCTGAGGGCCGCTaGGAGAGCCCCAGGGGACTATTGCTGTTGTCCTTG +
Preference number: 3 (lower is better)
Translates to: RLPTLPSMAEGR*ESPRGLLLLSL
Trigger: CAAGGACAACAGCAATAGTCCCCTGGGGCTCTCCCAGCGGCCCTCAGCCATAGATGGCAAGGTGGGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTAGCCCCAGGGGACTATaGCTGTTGTCCTTGGCATGG +
Preference number: 3 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKASPRGL*LLSLAW
Trigger: CCATGCCAAGGACAACAGCAATAGTCCCCTGGGGCT...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTaGAGCCTTCAGTGTGGTTGTAGGTCCTGGGTCAGC +
Preference number: 3 (lower is better)
Translates to: AFLSCLHEALPH*SLQCGCRSWVS
Trigger: GCTGACCCAGGACCTACAACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGCGCCGGAGCTGGCCGTaGAGCGCCACAGCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: HIYTREKVNITLCTSPARRRSWP*SATAKV
Trigger: GACCTTGGCTGTGGCGCTCAACGGCCAGCTCCGGCG...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp CAGTCAGCAAGGCCTGCCTCACCCTTTGGTTATGACTaGTCAGGCCTGAGCCCTGCAGCTCAGCACCCAACT +
Preference number: 3 (lower is better)
Translates to: QSARPASPFGYD*SGLSPAAQHPT
Trigger: AGTTGGGTGCTGAGCTGCAGGGCTCAGGCCTGACCAGTCATAACCAAAGGGTGAGGCAGGCCTTGCTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp CCAGGACACTTGGAGATCCACACAGGGCAAAATGTCTaGGAGAACCTCCCGGGCCAGTCTGAGTGGGAGGTT +
Preference number: 3 (lower is better)
Translates to: PGHLEIHTGQNV*ENLPGQSEWEV
Trigger: AACCTCCCACTCAGACTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGTGTGGATCTCCAAGTGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGGCCTTTCTCTCCTGCTaGCACGAGGCTCTGCCGCAC +
Preference number: 3 (lower is better)
Translates to: HIYTREKVNITLCTSPARAFLSC*HEALPH
Trigger: GTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTAGAAATTCAGTGGGATaGCCGGGGCCAGGTGAGGCA +
Preference number: 3 (lower is better)
Translates to: SMVLVQARNEVMAACPEARNSVG*PGPGEA
Trigger: TGCCTCACCTGGCCCCGGCAATCCCACTGAATTTCT...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGTGTATAGACCCACTTTaGCAGAACATTTACACGACC +
Preference number: 3 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGCIDPL*QNIYTT
Trigger: GGTCGTGTAAATGTTCTGCAAAAGTGGGTCTATACA...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR GCA 72 bp AAGATACAGCCTTTCTCTCCTGCTTGCACGAGGCTCTaGCGCACTGGAGCCTTCAGTGTGGTTGTAGGTCCT +
Preference number: 3 (lower is better)
Translates to: KIQPFSPACTRL*RTGAFSVVVGP
Trigger: AGGACCTACAACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGCTGTATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp AAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTaGAGCTGCTACCAAATGGGAGGGGACCTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: KLELTRCRLDPC*SCYQMGGDLGV
Trigger: CACTCCCAGGTCCCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTCTGGCACCAGGACACTaGGAGATCCACACAGGGCAA +
Preference number: 3 (lower is better)
Translates to: FRREMKSWLPALKLTKQVLAPGH*EIHTGQ
Trigger: TTGCCCTGTGTGGATCTCCAAGTGTCCTGGTGCCAG...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTGCCTCCCGGCCTTTATaGCAGGAGGGCCCGAGACTC +
Preference number: 3 (lower is better)
Translates to: VFLKDAALPLLVSERLVLASRPL*QEGPRL
Trigger: GAGTCTCGGGCCCTCCTGCAATAAAGGCCGGGAGGC...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTAGAAATTCAGTGGGATaGCCGGGGCCAGGTGAGGCA +
Preference number: 3 (lower is better)
Translates to: VFLKDAALPLLVSERLVLRNSVG*PGPGEA
Trigger: TGCCTCACCTGGCCCCGGCAATCCCACTGAATTTCT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR-3UTR CAA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCTGGCACCAGGACACTaGGAGATCCACACAGGGCAA +
Preference number: 3 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNLAPGH*EIHTGQ
Trigger: TTGCCCTGTGTGGATCTCCAAGTGTCCTGGTGCCAG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CCA 72 bp ATAGACCCACTTTTGCAGAACATTTACACGACCCTTTaGCTGTACATATCTACACACGGGAAAAAGTTAACA +
Preference number: 3 (lower is better)
Translates to: IDPLLQNIYTTL*LYISTHGKKLT
Trigger: TGTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTCTGCAAAAGTGGGTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
3UTR CAA 72 bp GCCGAGGAGCAGCAGAGGGGCCGCCGGAGCTGGCCGTaGAGCGCCACAGCCAAGGTCACGCTTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AEEQQRGRRSWP*SATAKVTLGAG
Trigger: CCCAGCACCAAGCGTGACCTTGGCTGTGGCGCTCAACGGCCAGCTCCGGCGGCCCCTCTGCTGCTCCTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
CDS-3UTR TCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCCATTGTCCTGCATGCTaGCCACGCTGCCCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAAHCPAC*PRCPGG
Trigger: GCCGCCGGGGCAGCGTGGTCAGCATGCAGGACAATG...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCCCCGCAGGGCTGCCTTaGGCAGGATGGAGCGGAACC +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAAPAGLP*AGWSGT
Trigger: GGTTCCGCTCCATCCTGCCCAAGGCAGCCCTGCGGG...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCCCGCAGGGCTGCCTTaGGCAGGATGGAGCGGAACC +
Preference number: 4 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGPAGLP*AGWSGT
Trigger: GGTTCCGCTCCATCCTGCCCAAGGCAGCCCTGCGGG...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAAGGGGAGGTGGCAGGCTaGGCCTGGGCCCACACCTGG +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQGEVAG*AWAHTW
Trigger: CCAGGTGTGGGCCCAGGCGCAGCCTGCCACCTCCCC...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCAGACAGGGGCCCCCGCTaGGTCTTGGTTGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: GHTELRLPPAGPSCRPRPDRGPR*VLVDWN
Trigger: GTTCCAGTCAACCAAGACCCAGCGGGGGCCCCTGTC...TGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACCCGCTGGGTCTTGGTTaGCTGGAACAGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHPLGLG*LEQLGV
Trigger: GACCCCAAGCTGTTCCAGTCAACCAAGACCCAGCGG...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCTGGACCACTGTTTCTTaGGGCCGCGCCCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGWTTVS*GRAPLG
Trigger: CCCTAGTGGGGCGCGGCCTCAAGAAACAGTGGTCCA...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGGTGGGCGGGCGGCCTTaGCTGATGGCAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGVGGRP*LMAGSG
Trigger: TCCGCTCCCTGCCATCAGTCAAGGCCGCCCGCCCAC...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCACCTTGTGTGTGTACTaGCCAGAGCCGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAATLCVY*PEPPGP
Trigger: TGGCCCAGGCGGCTCTGGGCAGTACACACACAAGGT...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCTCCGAGACGGCTTCGTaGTTGACGAGCTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAASETAS*LTSSVA
Trigger: GGCCACTGAGCTCGTCAAGCACGAAGCCGTCTCGGA...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACTCCGAGACGGCTTCGTaGTTGACGAGCTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHSETAS*LTSSVA
Trigger: GGCCACTGAGCTCGTCAAGCACGAAGCCGTCTCGGA...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCGCTTGCACGAGGCTCTaGCGCACTGGAGCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAAACTRL*RTGAFS
Trigger: ACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGC...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACACGTGGGTCTGGAACTaGAGGCCTCTCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHTWVWN*RPLLCP
Trigger: AGGGCAGAGGAGAGGCCTGCAGTTCCAGACCCACGT...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACTGCCTTGGGCAGGATaGAGCGGAACCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GHTELRLPPAGPSCRPRPLPWAG*SGTSWE
Trigger: TTCCCAGCTGGTTCCGCTCCATCCTGCCCAAGGCAG...TGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCAGGGCACCAGGCGGATaGCAAGGCGGCCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGRAPGG*QGGPGR
Trigger: GCGCCCTGGGCCGCCTTGCCATCCGCCTGGTGCCCT...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCAGCCAAGGTCACGCTTaGTGCTGGGGAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAASQGHA*CWGERA
Trigger: TGCCCTCTCTCCCCAGCACCAAGCGTGACCTTGGCT...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCGCTTCTCTGGATGGCTaGTCTCCCAGGCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAAASLDG*SPRQQA
Trigger: TGCCTGCTGCCTGGGAGACCAGCCATCCAGAGAAGC...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCGGATCTCCACGCCGCTaGCTTCGCCATATGTCTCGT +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAAGSPRR*LRHMSR
Trigger: ACGAGACATATGGCGAAGGCAGCGGCGTGGAGATCC...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAACCTTGCGCAGCGCCATaGGGGTGGCCGTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQPCAAP*GWPCCE
Trigger: CTCGCAACACGGCCACCCGCATGGCGCTGCGCAAGG...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTGCAGCGCCATGCGGGTaGCCGTGTTGCGAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGAAPCG*PCCERA
Trigger: GGCCCGCTCGCAACACGGCCACCCGCATGGCGCTGC...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
3UTR CAA 72 bp ATGGCTGAGGGCCGCTGGGAGAGCCCCAGGGGACTATaGCTGTTGTCCTTGGCATGGCTGGCGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MAEGRWESPRGL*LLSLAWLAAGQ
Trigger: CTGCCCAGCCGCCAGCCATGCCAAGGACAACAGCAATAGTCCCCTGGGGCTCTCCCAGCGGCCCTCAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
CDS-3UTR TCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTCGGCGGCTGCTGCTCTaGCTCTCAGACACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKARRLLL*LSDTGW
Trigger: CCAGCCGGTGTCTGAGAGTCAGAGCAGCAGCCGCCG...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTGGCCGAAGCTGCCCTTaGGCAGCGCCATGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGGRSCP*AAPCGW
Trigger: CCACCCGCATGGCGCTGCGCAAGGGCAGCTTCGGCC...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTCTCTGTGTCCGCTCGTaGCGGTGGCTGGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGLCVRS*RWLGPL
Trigger: CAGCGGGCCCAGCCACCGGCACGAGCGGACACAGAG...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGCGGCCGCCACACTCATaGTGCGCTGGCCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGRPPHS*CAGPAA
Trigger: AGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCG...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGCGCTGCACTCACGGTaGCCTACTTGGGGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGALHSR*PTWGPR
Trigger: CCGCGGGCCCCAAGTAGGGCACCGTGAGTGCAGCGC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCTGCCCAGAGCCGCCTaGGCCATCTGTGTACGGCCG +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGLPRAA*AICVRP
Trigger: CGGCCGTACACAGATGGCCCAGGCGGCTCTGGGCAG...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCTGGAGCGGAACCAGCTaGGAATGTGCATGCCCACAT +
Preference number: 4 (lower is better)
Translates to: TRQARGREAGQGALCGAAWSGTS*ECACPH
Trigger: ATGTGGGCATGCACATTCCCAGCTGGTTCCGCTCCA...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGAGGCTCCCCAGAGGTCTaGTCCGAGACGGCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGGSPEV*SETASC
Trigger: GCACGAAGCCGTCTCGGACCAGACCTCTGGGGAGCC...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCGCCCTTCTTGGAGCTaGGGTCCCCGGCGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGRPSWS*GPRRLC
Trigger: ACACAGGCGCCGGGGACCCCAGCTCCAAGAAGGGCG...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGTGCTCGCCATCCGCCTaGCTCTGTGTCCGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGCSPSA*LCVRSC
Trigger: GCACGAGCGGACACAGAGCCAGGCGGATGGCGAGCA...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGTGGCAGGCTGCGCCTaGGCCCACACCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRVAGCA*AHTWHQ
Trigger: CTGGTGCCAGGTGTGGGCCCAGGCGCAGCCTGCCAC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
3UTR CAA 72 bp GCTGAGCCCACTGCCCACAGGGCCTCCCGGCCTTTATaGCAGGAGGGCCCGAGACTCTTCCAGGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AEPTAHRASRPL*QEGPRLFQVLL
Trigger: GAGAAGCACCTGGAAGAGTCTCGGGCCCTCCTGCAATAAAGGCCGGGAGGCCCTGTGGGCAGTGGGCTCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
CDS-3UTR CCA 90 bp GTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCGGCTCCCCAGAGGTCTaGTCCGAGACGGCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: VLLDTLSSACLPRGHLVGGSPEV*SETASC
Trigger: GCACGAAGCCGTCTCGGACCAGACCTCTGGGGAGCC...GCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCGCAGGGAGCACTGTGTaGTGCGGCCCGTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGAGSTV*CGPCPP
Trigger: TGGAGGACACGGGCCGCACCACACAGTGCTCCCTGC...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTCTGCCATCCTGGGGCTaGTGGTCCCTGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKALPSWG*WSLPAS
Trigger: GGAAGCTGGCAGGGACCACCAGCCCCAGGATGGCAG...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCGTCCCTCTGCCATCCTaGGGCTGGTGGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGVPLPS*GWWSLP
Trigger: TGGCAGGGACCACCAGCCCCAGGATGGCAGAGGGAC...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAAACAGAGCCTGGTCGCTaGACAAAGGCCGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQTEPGR*TKAEAR
Trigger: CCTGGCCTCGGCCTTTGTCCAGCGACCAGGCTCTGT...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCAGACTCCATAATGACGTaGGTCTGGAACTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GHTELRLPPAGPSCRPRPDSIMT*VWNCRP
Trigger: AGGCCTGCAGTTCCAGACCCACGTCATTATGGAGTC...TGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCTCTTACGGGAAAGCATaGGCTGTGCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGSYGKA*AVPPSP
Trigger: TGGAGAAGGAGGCACAGCTCATGCTTTCCCGTAAGA...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGAAGACGGCTTCGTGCTTaGCGAGCTCAGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGRRLRA*RAQWPP
Trigger: AGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCT...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACGAAGAACTCATCATCTaGGCTCTCATCCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHEELII*ALIRVP
Trigger: AGGGACTCGGATGAGAGCTCAGATGATGAGTTCTTC...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACCTTGGGCAGCACGGTaGTGTAGCTGTCGGCAAACG +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGPWAAR*CSCRQT
Trigger: CGTTTGCCGACAGCTACATCACCGTGCTGCCCAAGG...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCGATCTTGGAGGGCGGTaGAGCCAGCGGCTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGDLGGR*SQRLAN
Trigger: GTTAGCCAGCCGCTGGCTGCACCGCCCTCCAAGATC...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGGAGGAGGGGGCGCCATaGTCTTGGAAGGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGEEGAP*SWKAAL
Trigger: CAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTC...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGATGGAGACCCCGCGCTaGACTCACGGTGCCCTACTT +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGMETPR*THGALL
Trigger: AAGTAGGGCACCGTGAGTGCAGCGCGGGGTCTCCAT...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAAAGGTTCTGGTCCCTCTaGCATCCTGGGGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQRFWSL*HPGAGG
Trigger: ACCACCAGCCCCAGGATGGCAGAGGGACCAGAACCT...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGAAGCCTTCCCGTCGATaGGGAACTGCAAGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: IGHTELRLPPAGPSCRPRKPSRR*GTASWD
Trigger: GTCCCAACTTGCAGTTCCCCATCGACGGGAAGGCTT...CCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTGACAGGGGCCCCCGCTaGGTCTTGGTTGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKADRGPR*VLVDWN
Trigger: GTTCCAGTCAACCAAGACCCAGCGGGGGCCCCTGTC...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCGTAGTCCGGTGTCGTaGATGAACCTCTCGATCTTG +
Preference number: 4 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGRSPVS*MNLSIL
Trigger: CAAGATCGAGAGGTTCATCCACGACACCGGACTACG...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTGACTCGCTCCCCGCTTaGACGACCGAGACGACTTGG +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKADSLPA*TTETTW
Trigger: CCAAGTCGTCTCGGTCGTCCAAGCGGGGAGCGAGTC...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGCAGGCCGGCCGCAGCTaGAAAACATCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGQAGRS*KTSRAG
Trigger: CCCAGCCCTGGATGTTTTCCAGCTGCGGCCGGCCTG...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTGCGGGCCGCGCCCGGTaGCTGTACTTCAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAAGRAR*LYFSCA
Trigger: GGCGCAGCTGAAGTACAGCCACCGGGCGCGGCCCGC...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGCTGAGTGGGAGGTTCTaGTCCCTCTGCCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGLSGRF*SLCHPG
Trigger: CCCAGGATGGCAGAGGGACCAGAACCTCCCACTCAG...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAACCACCTTGCCATCTATaGCTGAGGGCCGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQPPCHL*LRAAGR
Trigger: TCTCCCAGCGGCCCTCAGCCATAGATGGCAAGGTGG...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGAGAGAAGGCAGGTGGTaGGGCGTGGGGGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGREGRW*GVGVWW
Trigger: CCACCACACCCCCACGCCCCACCACCTGCCTTCTCT...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCATGGCTGTAGGGGCTaGGGTTGGAGACCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGHGCRG*GWRPGQ
Trigger: TTGCCCTGGTCTCCAACCTCAGCCCCTACAGCCATG...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGAGCAAGGTTGGCTCGCTaGATCACTGTGGCAACTGCC +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGARLAR*ITVATA
Trigger: GGCAGTTGCCACAGTGATTCAGCGAGCCAACCTTGC...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAATGGCAAGGGCATCATTaGTCCGGTGGTTGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQWQGHH*SGGWPS
Trigger: TGACGGCCAACCACCGGATCAATGATGCCCTTGCCA...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAAAGGGCGGCTGGGTCATaGTGTGCACATCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQRAAGS*CAHPPS
Trigger: AGAAGGTGGATGTGCACATCATGACCCAGCCGCCCT...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGCACACTCAGGCCCAATaGTGCGGGGACAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGHTQAQ*CGDSRD
Trigger: GTCCCTGCTGTCCCCGCATCATTGGGCCTGAGTGTG...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTCACCACCCGCAGGGCTaGCTTGGGCAGGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: KTVLLDTLSSACLPRGHLHHPQG*LGQDGA
Trigger: CGCTCCATCCTGCCCAAGGCAGCCCTGCGGGTGGTG...AAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACATGATGGGGAAGACCTaGTTCTTGTACTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHMMGKT*FLYSSI
Trigger: GATCGAGGAGTACAAGAAGCAGGTCTTCCCCATCAT...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGAGGAAAGCATGAGCTGTaGCTCCTTCTCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGGKHEL*LLLQLP
Trigger: CGGGAGCTGGAGAAGGAGGCACAGCTCATGCTTTCC...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp TTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGAAAGCATGAGCTGTaGCTCCTTCTCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLDTLSSACLPRGHLVGHGKHEL*LLLQLP
Trigger: CGGGAGCTGGAGAAGGAGGCACAGCTCATGCTTTCC...GTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACTGTGTCCAGGATGGTaGCTCCGTGCAGCACCAGTA +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGLCPGW*LRAAPV
Trigger: TACTGGTGCTGCACGGAGGCACCATCCTGGACACAG...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGACCGCAGCAGTGTGCTaGATTCATCAGGATGCCCGG +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGTAAVC*IHQDAR
Trigger: CCGGGCATCCTGATGAATGCAGCACACTGCTGCGGT...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTGGCTCAGGTGCCGACTaGTCTCCAGGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCGSGAD*SPGWSH
Trigger: GTGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCC...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTTGCTTCGGCTCAGGTaGCGACTGCTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKALLRLR*RLLSRL
Trigger: CAGCCTGGAGAGCAGTCGGCACCTGAGCCGAAGCAA...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTAACTGGCACTGCTGCTaGAGCTTCTTGGTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKANWHCC*SFLVGR
Trigger: CCGGCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTT...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTCGGGCAGGCCGAAGCTaGCCTTGCGCAGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPARAGRS*PCAAPC
Trigger: GCATGGCGCTGCGCAAGGGCAGCTTCGGCCTGCCCG...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTCCGCCACACTCATGCTaGGCTGGCCCCGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAPPHSC*AGPAAR
Trigger: GCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGG...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp TCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCACACTGAGCTCCGCCTaGCTCCCGCGGGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: STKTVLLDTLSSACLPRGTLSSA*LPRGHL
Trigger: AAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGT...GCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp AAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTCTGCCCAGAGCCGCCTaGGCCATCTGTGTACGGCCG +
Preference number: 4 (lower is better)
Translates to: KTVLLDTLSSACLPRGHLLPRAA*AICVRP
Trigger: CGGCCGTACACAGATGGCCCAGGCGGCTCTGGGCAG...AAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACGTCTTATACTCGTTGTaGGGCACAGGGTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHVLYSL*GTGSLT
Trigger: TGTCAAAGACCCTGTGCCCCACAACGAGTATAAGAC...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCCATCCTCATTGAACTaGGCCATCTTACGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGPSSLN*AILRES
Trigger: GCTTTCCCGTAAGATGGCCCAGTTCAATGAGGATGG...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCACTCTGAGATGCTGTaGCGGGAAGGACTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGHSEML*REGLAP
Trigger: GGGAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTG...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAACGATCTGGGCGATGCTaGATGCCGTGTAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQRSGRC*MPCSSQ
Trigger: CTGAGAGCTACACGGCATCCAGCATCGCCCAGATCG...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCTGCCCGTCAGAACCTaGGGGCCGTCCTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRLPVRT*GPSSLA
Trigger: TGCCAATGAGGACGGCCCCCAGGTTCTGACGGGCAG...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGAGAGGCTCTGCCGCACTaGAGCCTTCAGTGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGEALPH*SLQCGC
Trigger: ACAACCACACTGAAGGCTCCAGTGCGGCAGAGCCTC...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAATATTGCTGTTGTCCTTaGCATGGCTGGCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQYCCCP*HGWRLG
Trigger: GCCCAGCCGCCAGCCATGCCAAGGACAACAGCAATA...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACCACTCTGAGATGCTGTaGCGGGAAGGACTCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLDTLSSACLPRGHLVGHHSEML*REGLAG
Trigger: TCCAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTG...GTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTGGACCCCTGTGGGTCTaGGAAGGCTCCACTGATGTC +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGGPLWV*EGSTDV
Trigger: GACATCAGTGGAGCCTTCTCAGACCCACAGGGGTCC...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp TTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGTCCGGTGTCGTGGATaGACCTCTCGATCTTGGACT +
Preference number: 4 (lower is better)
Translates to: LLDTLSSACLPRGHLVGHVRCRG*TSRSWT
Trigger: AGTCCAAGATCGAGAGGTTCATCCACGACACCGGAC...GTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp AGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGAGACGGCTTCGTGCTTaGCGAGCTCAGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFIGHTELRLPPAGPSCRRRLRA*RAQWPP
Trigger: AGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCT...CCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTGGTGCAGCTCGGAGATaGGCAGCTTCAGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKAGAARR*AASGSW
Trigger: CCAACTTCCTGAAGCTGCTCATCTCCGAGCTGCACC...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGCACAGGGCATCAAATaGCAGGATGCCCCCGACGCA +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRAQGIK*QDAPDA
Trigger: TGCGTCGGGGGCATCCTGGCATTTGATGCCCTGTGC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGAATGAGTCGCTCCTCTTaGGGGGCAGTTGCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGMSRSS*GAVAFW
Trigger: CCAAAAGGCAACTGCCCCGCAAGAGGAGCGACTCAT...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTAGGAAGGCCTGGTGCTaGTGGATGGTATCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKARKAWC*WMVSSS
Trigger: CGAGCTGGATACCATCCAGCAGCACCAGGCCTTCCT...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCTGCGCTGGCCCCGCTaGTCGCCATCCGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYLRWPR*SPSAWL
Trigger: GAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAG...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGTCAGGCCTGAGCCCTaGAGCTCAGCACCCAACTCT +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRVRPEP*SSAPNS
Trigger: AGAGTTGGGTGCTGAGCTGCAGGGCTCAGGCCTGAC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACAACTCAGGGGCACCCTaGCGGTACAGACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: LLDTLSSACLPRGHLVGHNSGAP*RYRPSC
Trigger: ACAAGATGGTCTGTACCGCCAGGGTGCCCCTGAGTT...GTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGGTGCAGCCAGCGGCTaGCTAACCTCGTCCTCTATG +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGGAASG*LTSSSM
Trigger: CATAGAGGACGAGGTTAGCCAGCCGCTGGCTGCACC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGCCCCATAGGCAAGGTTaGCTCGCTGAATCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGPHRQG*LAESLW
Trigger: CCACAGTGATTCAGCGAGCCAACCTTGCCTATGGGG...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTCTCAGCACGCTGGCATaGAGGCTGGACAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCLSTLA*RLDRKA
Trigger: GGCCTTCCTGTCCAGCCTCCATGCCAGCGTGCTGAG...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTTTCCGCAGCTTCACGTaGGTCCGCTTGCGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCFRSFT*VRLRCH
Trigger: GTGGCAGCGCAAGCGGACCCACGTGAAGCTGCGGAA...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTACACCGCCACGTCCTTaGTGGAGCCATAGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCTPPRP*WSHRPR
Trigger: ACGCGGCCTATGGCTCCACCAAGGACGTGGCGGTGT...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGAGGGGCCGCCGGAGCTaGCCGTTGAGCGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARRGRRS*PLSATA
Trigger: GGCTGTGGCGCTCAACGGCCAGCTCCGGCGGCCCCT...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCAGAGGCTCCCCGCTTaGACGACCGAGACGACTTGG +
Preference number: 4 (lower is better)
Translates to: STKTVLLDTLSSACLPRGQRLPA*TTETTW
Trigger: CCAAGTCGTCTCGGTCGTCCAAGCGGGGAGCCTCTG...GCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
3UTR CAA 72 bp AGGCTGCGCCTGGGCCCACACCTGGCACCAGGACACTaGGAGATCCACACAGGGCAAAATGTCTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RLRLGPHLAPGH*EIHTGQNVWEN
Trigger: GTTCTCCCAGACATTTTGCCCTGTGTGGATCTCCAAGTGTCCTGGTGCCAGGTGTGGGCCCAGGCGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
CDS-3UTR TCA 90 bp GACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCTGCATCCTCCACTCTaGGATGCTGTGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: DSFIGHTELRLPPAGPSCLHPPL*DAVAGR
Trigger: CCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAG...ACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTAAAGGCGGCAGGGCGTaGAAGCGCCGTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAKGGRA*KRRSSS
Trigger: GCTGCTGGAACGGCGCTTTCACGCCCTGCCGCCTTT...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTCGCTGCCCCGGCGGCTaGTGCTCTGACTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPARCPGG*CSDSQT
Trigger: TGTCTGAGAGTCAGAGCAGCAGCCGCCGGGGCAGCG...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTCCACGTCAGTGCGTGTaGCCAGGCCAGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEAPRQCV*PGQASW
Trigger: CCAGGAGGCCTGGCCTGGGCACACGCACTGACGTGG...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAAGAAGTCATGGCTGCCTaGCCTGAAGCTGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQEVMAA*PEADKA
Trigger: TGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTC...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTCCTCCCGGCCTTTATTaGAGGAGGGCCCGAGACTCT +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCPPGLY*RRARDS
Trigger: AGAGTCTCGGGCCCTCCTGCAATAAAGGCCGGGAGG...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGATGTATCATGTACAGCTaGGCGATGCGGTACTCCTCC +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGCIMYS*AMRYSS
Trigger: GGAGGAGTACCGCATCGCCCAGCTGTACATGATACA...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGATGGGTCTTGGTTGACTaGAACAGCTTGGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGWVLVD*NSLGSS
Trigger: AGAGGACCCCAAGCTGTTCCAGTCAACCAAGACCCA...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTGCCCCCGCTGGGTCTTaGTTGACTGGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DSFIGHTELRLPPAGPSCAPAGS*LTGTAW
Trigger: CCAAGCTGTTCCAGTCAACCAAGACCCAGCGGGGGC...ACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGGCTGGAAACAACACTaGCCTGGGCTCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGGWKQH*PGLQAG
Trigger: CCCCGCCTGGAGCCCAGGCCAGTGTTGTTTCCAGCC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGCGAGCCAGGGAGGGGTaGGGGGTCTCTGCTGAATCC +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGRAREG*GVSAES
Trigger: GGATTCAGCAGAGACCCCCCACCCCTCCCTGGCTCG...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCAGCGGGAAGGACTCGCTaGAAGGCAAAACCCCAGATT +
Preference number: 4 (lower is better)
Translates to: FIGHTELRLPPAGPSCRPAGRTR*KAKPQI
Trigger: AATCTGGGGTTTTGCCTTCCAGCGAGTCCTTCCCGC...TGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTTGGACCACTGTTTCTTaGGGCCGCGCCCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAWTTVS*GRAPLG
Trigger: CCCTAGTGGGGCGCGGCCTCAAGAAACAGTGGTCCA...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGGCAGACCTGCCCATTaGAGGTCATGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGGRPAH*RSCPPG
Trigger: CCCAGGAGGGCATGACCTTCAATGGGCAGGTCTGCC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTCCTGGCTGGCGATGCTaGTCTCACTGGCTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEAPGWRC*SHWLGG
Trigger: TCCGCCGAGCCAGTGAGATCAGCATCGCCAGCCAGG...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGAGTTGTCATGCCTCATaGCCTGTCTCAGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGSCHAS*PVSAER
Trigger: CCTTTCTGCTGAGACAGGTCATGAGGCATGACAACT...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTTTGGCTTTGAGGGGGTaGACACCGACACTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGLALRG*TPTLPC
Trigger: GCAAGGAAGTGTCGGTGTTCACCCCCTCAAAGCCAA...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTTGTTCAGGCGAGAAATaGAGTCATGGCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGCSGEK*SHGCLP
Trigger: GGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACA...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTCCAGACGGGAGGGGCTaGGACGTGAAGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAPDGRG*DVKAVM
Trigger: CATCACAGCCTTCACGTCTCAGCCCCTCCCGTCTGG...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp TCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCGGATCTCCACGCCGCTaGCTTCGCCATATGTCTCGT +
Preference number: 4 (lower is better)
Translates to: STKTVLLDTLSSACLPRGGSPRR*LRHMSR
Trigger: ACGAGACATATGGCGAAGGCAGCGGCGTGGAGATCC...GCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp ACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATTCCTCCACTCTGAGATaGTGTGGCGGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: TKTVLLDTLSSACLPRGHSSTLR*CGGKDS
Trigger: CGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGA...ATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCGGACAGGTCCTCGTaGGCATCGAAGAACTCATCA +
Preference number: 4 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKASDRSS*ASKNSS
Trigger: TGATGAGTTCTTCGATGCGCACGAGGACCTGTCCGA...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTAGCTCAGGGTTTCTCTaGACGGTCTCGACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCSSGFL*TVSTSS
Trigger: GCTGCTGGTCGAGACCGTGCAGAGAAACCCTGAGCT...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGATGAACTGGCACTGCTaGTGCAGCTTCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGMNWHC*CSFLVG
Trigger: GCCCACCAAGAAGCTGCAGCAGCAGTGCCAGTTCAT...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGGGAGCACTGTGTGGTaGGGCCCGTGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGGSTVW*GPCPPQ
Trigger: TTGTGGAGGACACGGGCCGCACCACACAGTGCTCCC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAACCATCCTCATTGAACTaGGCCATCTTACGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQPSSLN*AILRES
Trigger: GCTTTCCCGTAAGATGGCCCAGTTCAATGAGGATGG...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTCACTTTGCAGCGATCTaGGCGATGCTGGATGCCGTG +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCHFAAI*AMLDAV
Trigger: CACGGCATCCAGCATCGCCCAGATCGCTGCAAAGTG...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTATGGTGCGAAGCAGGTaGTTCCGGGAGCGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCMVRSR*FRERRK
Trigger: CTTTCTGCGCTCCCGGAACCACCTGCTTCGCACCAT...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGAGGCTGGACCCCTGTTaGAGCTGCTACCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRRLDPC*SCYQMG
Trigger: TCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCT...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTCAAAGAGAAGGCAGGTaGTGGGGCGTGGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAQREGR*WGVGVW
Trigger: CCACACCCCCACGCCCCACCACCTGCCTTCTCTTTG...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTAGATTGACCGCCAACTaGAGAGGAAGGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DSFIGHTELRLPPAGPSCRLTAN*RGRAQR
Trigger: CCTCTGGGCCCTTCCTCTCCAGTTGGCGGTCAATCT...ACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTCCACAGGAGAGAGGTTaGACACGTCGGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCPQERG*TRRGFL
Trigger: GAGAAAACCCCGACGTGTTCAACCTCTCTCCTGTGG...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCCCACAGGAGAGAGGTTaGACACGTCGGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVPQERG*TRRGFL
Trigger: GAGAAAACCCCGACGTGTTCAACCTCTCTCCTGTGG...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGCTTGTATGCGCACATaGTGGGGAAGACCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRACMRT*WGRPAS
Trigger: AGAAGCAGGTCTTCCCCATCATGTGCGCATACAAGC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGTCTTACGGGAAAGCATaGGCTGTGCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGSYGKA*AVPPSP
Trigger: TGGAGAAGGAGGCACAGCTCATGCTTTCCCGTAAGA...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGGTAGTGCACGCGCATaGCGGTGTCGAACACGTTGG +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGGSARA*RCRTRW
Trigger: CCAACGTGTTCGACACCGTCATGCGCGTGCACTACC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGCTCTCAGCCATGCCTaGCACCTGGCTGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEAALSHA*HLAGDA
Trigger: AGCATCGCCAGCCAGGTGTCAGGCATGGCTGAGAGC...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTATGACTGGTCAGGCCTaGGCCCTGCAGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEAMTGQA*ALQLST
Trigger: GGTGCTGAGCTGCAGGGCTCAGGCCTGACCAGTCAT...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp TACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCAGGCAAAACCCCAGATTaGCCGCCAACTGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: YQDSFIGHTELRLPPAGPGKTPD*PPTGEE
Trigger: TTCCTCTCCAGTTGGCGGTCAATCTGGGGTTTTGCC...TGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp GACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCCGTCGATGGGGAACTaGAAGTTGGGACTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: DSFIGHTELRLPPAGPSCPSMGN*KLGLLG
Trigger: GCCTAGAAGTCCCAACTTGCAGTTCCCCATCGACGG...ACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp CTCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCCGGATGTTCTCCATaGTCAGCCCATACCACTCGT +
Preference number: 4 (lower is better)
Translates to: LYQDSFIGHTELRLPPAGPGCSP*SAHTTR
Trigger: ACGAGTGGTATGGGCTGAGCATGGAGAACATCCGGG...CCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp AGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGTCGGACAGGTCCTCGTaGGCATCGAAGAACTCATCA +
Preference number: 4 (lower is better)
Translates to: SFIGHTELRLPPAGPSCRSDRSS*ASKNSS
Trigger: TGATGAGTTCTTCGATGCGCACGAGGACCTGTCCGA...CCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGGAATGTGGTCCTGACTaGTGGACAGACAGCCTTCGT +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRECGPD*WTDSLR
Trigger: ACGAAGGCTGTCTGTCCAGCAGTCAGGACCACATTC...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTTGCCCCGGCGGCTGCTaGTCTGACTCTCAGACACCG +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVACPGGC*SDSQTP
Trigger: CGGTGTCTGAGAGTCAGAGCAGCAGCCGCCGGGGCA...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAGGGCGGGGCCCGTCTTaGCAGGTGGGCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPGRGPS*QVGAGT
Trigger: TGTTCCCGCGCCCACCTGGCAAGACGGGCCCCGCCC...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTGCTGGGCCGAGATGGTaGGAAGCAGGTGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAAGPRW*EAGGSG
Trigger: CCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGC...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCGGCCACATCACTTCTaGCTAGACGACTGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: LYQDSFIGHTELRLPPAGRPHHF*LDDCRF
Trigger: GAAGCGACAGTCGTCTAGGCAGAAGTGATGTGGCCG...CCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp TTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACTCCTCCACGGTCATTaGCAGAGGAATCCGATATTC +
Preference number: 4 (lower is better)
Translates to: FIGHTELRLPPAGPSCRPLLHGH*QRNPIF
Trigger: GAATATCGGATTCCTCTGCCAATGACCGTGGAGGAG...TGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp TCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCTGGAGCGGAACCAGCTaGGAATGTGCATGCCCACAT +
Preference number: 4 (lower is better)
Translates to: STKTVLLDTLSSACLPRGWSGTS*ECACPH
Trigger: ATGTGGGCATGCACATTCCCAGCTGGTTCCGCTCCA...GCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp AGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGTCTCATCCGAGTCCCTaGCAATACTCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SFIGHTELRLPPAGPSCRSHPSP*QYSASS
Trigger: GGAGGATGCAGAGTATTGCCAGGGACTCGGATGAGA...CCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGTGTGTCTTCCGGCTCTaGGCTCTCGATCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRCVFRL*ALDLVH
Trigger: ATGGACAAGATCGAGAGCCCAGAGCCGGAAGACACA...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGTGTGTCTTCCGGCTCTaGGCTCTCGATCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SFIGHTELRLPPAGPSCRCVFRL*ALDLVH
Trigger: ATGGACAAGATCGAGAGCCCAGAGCCGGAAGACACA...CCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTTATCCAGCTCGTAGGTaGATGAGTCGCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGYPARR*MSRSSC
Trigger: GCAAGAGGAGCGACTCATCCACCTACGAGCTGGATA...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTCGCTGGCATGGAGGCTaGACAGGAAGGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEARWHGG*TGRPGA
Trigger: AGCACCAGGCCTTCCTGTCCAGCCTCCATGCCAGCG...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGTCGCCTGAGGGCGGCTaGGTCATGATGTGCACATCC +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGSPEGG*VMMCTS
Trigger: GGATGTGCACATCATGACCCAGCCGCCCTCAGGCGA...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGGTGGCTGGGCCCGCTaGGCTGGGCCGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQGGWAR*AGPRWC
Trigger: GCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGCCTCCTGGCGGGGCTaGCCACCCTGGCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQASWRG*PPWPST
Trigger: GGTGCTAGGCCAGGGTGGCCAGCCCCGCCAGGAGGC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTCCGGGCCAGTCTGAGTaGGAGGTTCTGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEAPGQSE*EVLVPL
Trigger: CAGAGGGACCAGAACCTCCCACTCAGACTGGCCCGG...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCCATGCCTCGCTAAGTaGGCAGGAGCAGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAPCLAK*AGAGPT
Trigger: CGTGGGCCCTGCTCCTGCCCACTTAGCGAGGCATGG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACATGGCTGAGGGCCGCTaGGAGAGCCCCAGGGGACTA +
Preference number: 4 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYMAEGR*ESPRGL
Trigger: TAGTCCCCTGGGGCTCTCCCAGCGGCCCTCAGCCAT...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTAGAGAAGGTGGATGGTaGGGCTCTCAGGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: DSFIGHTELRLPPAGPSCREGGW*GSQGTA
Trigger: TGCTGTTCCCTGAGAGCCCCACCATCCACCTTCTCT...ACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGAAGAACTCATCATCTaGGCTCTCATCCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AWGCGGSGTKASILTGLGEELII*ALIRVP
Trigger: AGGGACTCGGATGAGAGCTCAGATGATGAGTTCTTC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTCCCTGCCAGCTTCCATaGCAAGCCGGACCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVPCQLP*QAGPVR
Trigger: CCTGACGGGTCCGGCTTGTCATGGAAGCTGGCAGGG...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTGTCCAGCCCGTGGCCTaGGGCTGGAAACAACACTGG +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAVQPVA*GWKQHW
Trigger: CCAGTGTTGTTTCCAGCCTCAGGCCACGGGCTGGAC...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTCTTGCCATCTATGGCTaGGGGCCGCTGGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVLAIYG*GPLGEP
Trigger: GGGCTCTCCCAGCGGCCCTCAGCCATAGATGGCAAG...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp TACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCAAGCGGAACTCCACCTTaGAGAGCTTGTATGCGCACA +
Preference number: 4 (lower is better)
Translates to: YQDSFIGHTELRLPPAGPSGTPP*RACMRT
Trigger: TGTGCGCATACAAGCTCTGCAAGGTGGAGTTCCGCT...TGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTAGGATGGTGCCTCCGTaGAGCACCAGTAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEARMVPP*STSSST
Trigger: CGTGCTGCTACTGGTGCTGCACGGAGGCACCATCCT...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTTGGAGCCACCACTACTaGCACCACCACCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEAWSHHY*HHHHCC
Trigger: GCAGCAGTGGTGGTGGTGGCAGTAGTGGTGGCTCCA...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTTGGGTCCGCTTGCGCTaGCACTTCTCCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAWVRLR*HFSLGF
Trigger: AAAGCCAAGGGAGAAGTGGCAGCGCAAGCGGACCCA...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTGTGATGAACTGGCACTaGTGCTGCAGCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCVMNWH*CCSFLV
Trigger: CACCAAGAAGCTGCAGCAGCAGTGCCAGTTCATCAC...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTACAGCCTTTCTCTCCTaGTTGCACGAGGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPATAFLS*LHEALP
Trigger: CGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGCTGT...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTCTCCTCCACGGTCATTaGCAGAGGAATCCGATATTC +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGLLHGH*QRNPIF
Trigger: GAATATCGGATTCCTCTGCCAATGACCGTGGAGGAG...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTTGTATCATGTACAGCTaGGCGATGCGGTACTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSFIGHTELRLPPAGPSCCIMYS*AMRYSS
Trigger: GGAGGAGTACCGCATCGCCCAGCTGTACATGATACA...ACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp TTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACAAGTCGATTGTCAGCTaGTTCTTTTCCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLDTLSSACLPRGHLVGHKSIVS*FFSTGE
Trigger: CTCTCCTGTGGAAAAGAACCAGCTGACAATCGACTT...GTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp CAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGGGTCTTGGTTGACTaGAACAGCTTGGGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QDSFIGHTELRLPPAGPSWVLVD*NSLGSS
Trigger: AGAGGACCCCAAGCTGTTCCAGTCAACCAAGACCCA...AGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTCGTAGTCCGGTGTCGTaGATGAACCTCTCGATCTTG +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCRSPVS*MNLSIL
Trigger: CAAGATCGAGAGGTTCATCCACGACACCGGACTACG...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTCCTGGTGCTGCTGGATaGTATCCAGCTCGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAPGAAG*YPARRW
Trigger: CCACCTACGAGCTGGATACCATCCAGCAGCACCAGG...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGCATCATTGATCCGGTaGTTGGCCGTCACGTTCCGC +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGASLIR*LAVTFR
Trigger: GCGGAACGTGACGGCCAACCACCGGATCAATGATGC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAACTGGGCCCGCTGGGCTaGGCCGAGATGGTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQLGPLG*AEMVRS
Trigger: GCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAG...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCCATCCTGGGGCTGGTaGTCCCTGCCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAPSWGW*SLPASM
Trigger: CATGGAAGCTGGCAGGGACCACCAGCCCCAGGATGG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTAGAGTAGAAATTCAGTaGGATTGCCGGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCRVEIQ*DCRGQV
Trigger: CACCTGGCCCCGGCAATCCCACTGAATTTCTACTCT...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTGGTGGAAAGCAGACCTaGATACAGAAGAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGGGKQT*IQKRLP
Trigger: GGGAAGTCTCTTCTGTATCCAGGTCTGCTTTCCACC...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGACAGCAGACAGGCTaGGCACAAGGTGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVGQQTG*AQGEDL
Trigger: AAGATCTTCACCTTGTGCCCAGCCTGTCTGCTGTCC...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp ACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATATAATGACGTGGGTCTaGAACTGCAGGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TKTVLLDTLSSACLPRGHIMTWV*NCRPLL
Trigger: GAGGAGAGGCCTGCAGTTCCAGACCCACGTCATTAT...ATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCCGCTGGGTCTTGGTTaGCTGGAACAGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAPLGLG*LEQLGV
Trigger: GACCCCAAGCTGTTCCAGTCAACCAAGACCCAGCGG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp AAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGCTTGTATGCGCACATaGTGGGGAAGACCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KTVLLDTLSSACLPRGHLACMRT*WGRPAS
Trigger: AGAAGCAGGTCTTCCCCATCATGTGCGCATACAAGC...AAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR TCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGGCTGCTGGAATGGCGTaGGCAGGGCTCAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVAAGMA*AGLSPQ
Trigger: CTGAGGACTGAGCCCTGCTCACGCCATTCCAGCAGC...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTTCTCCCCAGTCAGGGTaGCCATGTCCAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVSPQSG*PCPGAH
Trigger: ATGGGCCCCTGGACATGGTCACCCTGACTGGGGAGA...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGGTAGAGCCACTCGCCTaGGGGCGGCTGGGTCATGAT +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVVEPLA*GRLGHD
Trigger: ATCATGACCCAGCCGCCCTCAGGCGAGTGGCTCTAC...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGCCGTCGATGGGGAACTaGAAGTTGGGACTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGPSMGN*KLGLLG
Trigger: GCCTAGAAGTCCCAACTTGCAGTTCCCCATCGACGG...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCTCCCTGGCAATACTCTaGATCCTCCACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVSLAIL*ILHSEM
Trigger: CATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGA...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGGGGGATGTCGACGTTaGTTCGGCTCAGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVGGCRR*FGSGAD
Trigger: GTCGGCACCTGAGCCGAAGCAACGTCGACATCCCCC...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGCAGGCTGCCCACCTTaGCATCTATGGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVAGCPP*HLWLRA
Trigger: GGCCCTCAGCCATAGATGGCAAGGTGGGCAGCCTGC...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCTGCCTTGGGCAGGATaGAGCGGAACCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYLPWAG*SGTSWE
Trigger: TTCCCAGCTGGTTCCGCTCCATCCTGCCCAAGGCAG...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTACGACCGAGACGACTTaGAGGATGTGGACCACTGTT +
Preference number: 4 (lower is better)
Translates to: KTVLLDTLSSACLPRGHLTTETT*RMWTTV
Trigger: AACAGTGGTCCACATCCTCCAAGTCGTCTCGGTCGT...AAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTAACTCAGGGGCACCCTaGCGGTACAGACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPANSGAP*RYRPSC
Trigger: ACAAGATGGTCTGTACCGCCAGGGTGCCCCTGAGTT...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCAGTCCTCAGCACGCTaGCATGGAGGCTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAQSSAR*HGGWTG
Trigger: TCCTGTCCAGCCTCCATGCCAGCGTGCTGAGGACTG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTGGTGCGACTCAGGGATaGTGTAGGAGACACGCCCAC +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAGATQG*CRRHAH
Trigger: GTGGGCGTGTCTCCTACACCATCCCTGAGTCGCACC...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGTGGGCTGGGCCGAGATaGTGCGAAGCAGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVWAGPR*CEAGGS
Trigger: GGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCA...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTTCACGGTGCCCTACTTaGGGCCCGCGGCTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLSRCPT*GPRLPP
Trigger: CGGGGGCAGCCGCGGGCCCCAAGTAGGGCACCGTGA...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTACAGGGCAAAATGTCTaGGAGAACCTCCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEATGQNV*ENLPGQ
Trigger: CTGGCCCGGGAGGTTCTCCCAGACATTTTGCCCTGT...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGGACCCAGAACCAGGCTaGACTCCGTCACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARDPEPG*TPSQCW
Trigger: CCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTC...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTCTCGGGGACAGAGCCTaGTCGCTGGACAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVLGDRA*SLDKGR
Trigger: TCGGCCTTTGTCCAGCGACCAGGCTCTGTCCCCGAG...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAATGTCCTTGGCATGGCTaGCGGCTGGGCAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQCPWHG*RLGRQA
Trigger: CGCCTGCCTGCCCAGCCGCCAGCCATGCCAAGGACA...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCAGCATAGATACCAACTaGGGAGTGGGCACCATAGAC +
Preference number: 4 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVSIDTN*GVGTID
Trigger: GTCTATGGTGCCCACTCCCCAGTTGGTATCTATGCT...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
3UTR CAA 72 bp GAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTaGGAGCTGCTACCAAATGGGAGGGGACCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: ETRVNKMQAGPL*ELLPNGRGPGS
Trigger: ACTCCCAGGTCCCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
CDS-3UTR TCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTAGGGGAATGTGGTCCTaGCTGCTGGACAGACAGCCT +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVARGMWS*LLDRQP
Trigger: AGGCTGTCTGTCCAGCAGTCAGGACCACATTCCCCT...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTCCAGGGGCCCATACATaGACCTGCCCGTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVPGAHT*TCPSEP
Trigger: AGGTTCTGACGGGCAGGTTCATGTATGGGCCCCTGG...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAATTGCCGGGGCCAGGTaGGGCAAGGAGCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPIAGAR*GKEPMP
Trigger: AGGCATGGGCTCCTTGCCTCACCTGGCCCCGGCAAT...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTAGCTGGGAATGTGCATaGCCACATGATACACCTTGT +
Preference number: 4 (lower is better)
Translates to: DSFIGHTELRLPPAGPSCSWECA*PHDTPC
Trigger: ACAAGGTGTATCATGTGGGCATGCACATTCCCAGCT...ACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR GCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGAGCGGAACTCCACCTTaGAGAGCTTGTATGCGCACA +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGSGTPP*RACMRT
Trigger: TGTGCGCATACAAGCTCTGCAAGGTGGAGTTCCGCT...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTCTGCATTCATCAGGATaGCCGGGGACAGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEALHSSG*PGTAGH
Trigger: ATGACCTGCTGTCCCCGGGCATCCTGATGAATGCAG...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCTGGGCGATGCTGGATaGCGTGTAGCTCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYLGDAG*RVALSH
Trigger: ATGGCTGAGAGCTACACGGCATCCAGCATCGCCCAG...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGACCAGGCCCACGTCAGTaGGTGTGCCCAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGPGPRQ*VCPGQA
Trigger: GGCCTGGCCTGGGCACACGCACTGACGTGGGCCTGG...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACGACCCCTGTTGGAGCTaGTACCAAATGGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYDPCWS*YQMGGD
Trigger: GTCCCCTCCCATTTGGTAGCAGCTCCAACAGGGGTC...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTTCTCATCCGAGTCCCTaGCAATACTCTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPASHPSP*QYSASS
Trigger: GGAGGATGCAGAGTATTGCCAGGGACTCGGATGAGA...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGCAGCACGTGGATCTTaGAGGGCGGTGCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQAARGS*RAVQPA
Trigger: CGCTGGCTGCACCGCCCTCCAAGATCCACGTGCTGC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTTGTGGTCCTGACTGCTaGACAGACAGCCTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPACGPDC*TDSLRH
Trigger: ATGACGAAGGCTGTCTGTCCAGCAGTCAGGACCACA...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAACTGCCTCCTGGTACTaGGGGGAGGAGGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPTASWY*GEEVAS
Trigger: GCTGGCCACCTCCTCCCCCCAGTACCAGGAGGCAGT...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGCATGGTGGAGCTGCTaGAATGGCGTGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FRREMKSWLPALKLTKQVAWWSC*NGVSRA
Trigger: AGCCCTGCTCACGCCATTCCAGCAGCTCCACCATGC...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAGCCCGTCTTGCCAGGTaGGCGCGGGAACAGGCATAC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPARLAR*AREQAY
Trigger: GTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGC...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGGGGGCGCCATGCTCTTaGAAGGCTGCATTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVGAPCS*KAALWV
Trigger: GACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCC...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGGCCATGCCTGACACCTaGCTGGCGATGCTGATCTCA +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARAMPDT*LAMLIS
Trigger: TGAGATCAGCATCGCCAGCCAGGTGTCAGGCATGGC...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCACCTGGCCTAGCACCATaGAGACCCCGCGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPPGLAP*RPRAAL
Trigger: GAGTGCAGCGCGGGGTCTCCATGGTGCTAGGCCAGG...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGTCCTCCACAAGGCCCTaGGACAATCTCCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVSSTRP*DNLPGP
Trigger: TGGGCCTGGGAGATTGTCCCAGGGCCTTGTGGAGGA...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTAGGTGCTTCTCTGGATaGCTGGTCTCCCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVARCFSG*LVSQAA
Trigger: TGCTGCCTGGGAGACCAGCCATCCAGAGAAGCACCT...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGCTGAGAAGGCTCCACTaGTGTCCCTGTCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARLRRLH*CPCQRR
Trigger: CCTCCTTTGACAGGGACATCAGTGGAGCCTTCTCAG...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTGTCCGGTGTCGTGGATaGACCTCTCGATCTTGGACT +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAVRCRG*TSRSWT
Trigger: AGTCCAAGATCGAGAGGTTCATCCACGACACCGGAC...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGAGGTAGCGGGGGACGCTaGAAGGCGGCAGGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGGSGGR*KAAGRE
Trigger: TTCACGCCCTGCCGCCTTTCAGCGTCCCCCGCTACC...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCACCACCCGCAGGGCTaGCTTGGGCAGGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLHHPQG*LGQDGA
Trigger: CGCTCCATCCTGCCCAAGGCAGCCCTGCGGGTGGTG...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGCCCGGATGTTCTCCATaGTCAGCCCATACCACTCGT +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARPGCSP*SAHTTR
Trigger: ACGAGTGGTATGGGCTGAGCATGGAGAACATCCGGG...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGTCCCTGGCAATACTCTaGATCCTCCACTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGSLAIL*ILHSEM
Trigger: CATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGA...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCCAATCAGGCAGACCTaGCCATTGAAGGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYPIRQT*PLKVMP
Trigger: GGGCATGACCTTCAATGGGCAGGTCTGCCTGATTGG...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGGTCCTCAGTGCCGTTaGTGCGGGGGATGTCGACGT +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQGPQCR*CGGCRR
Trigger: ACGTCGACATCCCCCGCAGCAACGGCACTGAGGACC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGTGTAGCTCTCAGCCATaGCTGACACCTGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVCSSQP*LTPGWR
Trigger: TCGCCAGCCAGGTGTCAGGCATGGCTGAGAGCTACA...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTATGCTGGAGTTGTCATaGCTCATGACCTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAMLELS*LMTCLS
Trigger: GCTGAGACAGGTCATGAGGCATGACAACTCCAGCAT...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTACACCGACACTTCCTTaGCATCCAGCTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEATPTLP*HPAPRC
Trigger: GCATCTTGGAGCTGGATGGCAAGGAAGTGTCGGTGT...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGCGGGAACAGGCATACTaGTTTCCAGGAAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVREQAY*FPGSRP
Trigger: GGGACGGCTTCCTGGAAACCAGTATGCCTGTTCCCG...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGGCTGCATTGTGGGTCTaGAGCACATCCGACTCGGCA +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVAALWV*STSDSA
Trigger: TGCCGAGTCGGATGTGCTCCAGACCCACAATGCAGC...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTTGGAAGGCTGCATTGTaGGTCTGGAGCACATCCGAC +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAWKAAL*VWSTSD
Trigger: GTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCA...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCCATCCGTGATGAACTaGCACTGCTGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAPSVMN*HCCCSF
Trigger: GAAGCTGCAGCAGCAGTGCCAGTTCATCACGGATGG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGACGCAGAAAGTCGCCCTaGCCGGGCAGGCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGRRKSP*PGRPKL
Trigger: CAGCTTCGGCCTGCCCGGCCAGGGCGACTTTCTGCG...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACGCCGGAGCTGGCCGTTaGGCGCCACAGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNAGAGR*APQPRS
Trigger: TGACCTTGGCTGTGGCGCTCAACGGCCAGCTCCGGC...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGATGATGGGGAAGACCTaGTTCTTGTACTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGMMGKT*FLYSSI
Trigger: GATCGAGGAGTACAAGAAGCAGGTCTTCCCCATCAT...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGACCACCGCAGCAGTGTaGTGCATTCATCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVTTAAV*CIHQDA
Trigger: GGCATCCTGATGAATGCAGCACACTGCTGCGGTGGT...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCACCAGCATGGTGGAGCTaGTGGAATGGCGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPPAWWS*WNGVSR
Trigger: CCTGCTCACGCCATTCCAGCAGCTCCACCATGCTGG...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTTCTCAAAGTCAAACCTaGCCAGGGCACCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVASQSQT*PGHLCH
Trigger: ATGGCACAGGTGCCCTGGGCAGGTTTGACTTTGAGA...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGATGCTCTTGGAAGGCTaGATTGTGGGTCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARMLLEG*IVGLEH
Trigger: GTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCAT...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCTCGAGTTAACAAGATaGAGGCTGGACCCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVALELTR*RLDPCW
Trigger: CCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTAAAAACCGAAGTGTGTaGCCCACCCACCCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAKNRSV*PTHPRV
Trigger: TACTCTGGGGTGGGTGGGGCACACACTTCGGTTTTT...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGACCCCAGCCCGGTCCATaGGTCCCAACACCAGACCCA +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGPQPGP*VPTPDP
Trigger: TGGGTCTGGTGTTGGGACGCATGGACCGGGCTGGGG...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTATTTTTAAAGGACGCTaGCCTCCCTCTCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCIFKGR*PPSLSF
Trigger: GAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAAT...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTTCAAAGGAGGAGAAATaGGTCCCTAGGCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPASKEEK*VPRLTE
Trigger: TTCTGTGAGCCTAGGGACCCATTTCTCCTCCTTTGA...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGAAGCCTTCCCGTCGATaGGGAACTGCAAGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVKPSRR*GTASWD
Trigger: GTCCCAACTTGCAGTTCCCCATCGACGGGAAGGCTT...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGACGACCGAGACGACTTaGAGGATGTGGACCACTGTT +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARTTETT*RMWTTV
Trigger: AACAGTGGTCCACATCCTCCAAGTCGTCTCGGTCGT...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAGACTGCTCTCCAGGCTaGAGCCACCACTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPDCSPG*SHHYCH
Trigger: GTGGCAGTAGTGGTGGCTCCAGCCTGGAGAGCAGTC...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAGGGGCAGTTGCCTTTTaGGGTCCTCAGTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPGAVAF*GPQCRC
Trigger: GCAACGGCACTGAGGACCCCAAAAGGCAACTGCCCC...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGTGGAGCTGCTGGAATaGCGTGAGCAGGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQVELLE*REQGSV
Trigger: GACTGAGCCCTGCTCACGCCATTCCAGCAGCTCCAC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGAAAACATCCAGGGCTaGGATGACAGTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGENIQG*DDSLPQ
Trigger: TTGAGGAAGACTGTCATCCCAGCCCTGGATGTTTTC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGCACGCCCACTGTTGTTaGTCACCAGCGTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVHAHCC*SPAYPG
Trigger: ACCTGGATACGCTGGTGACCAACAACAGTGGGCGTG...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCGCCACGTCCTTGGTaGAGCCATAGGCCGCGTGCA +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLPPRPW*SHRPRA
Trigger: TGCACGCGGCCTATGGCTCCACCAAGGACGTGGCGG...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTGAAACAACACTGGCCTaGGCTCCAGGCGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLETTLA*APGGAG
Trigger: GCCTGCCCCGCCTGGAGCCCAGGCCAGTGTTGTTTC...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCGAGAAATGAAGTCATaGCTGCCTGCCCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: REMKSWLPALKLTKQVVAREMKS*LPALKL
Trigger: CAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGATTTACACGACCCTTTaGCTGTACATATCTACACAC +
Preference number: 4 (lower is better)
Translates to: REGRRSDPACRTAWSLFRIYTTL*LYISTH
Trigger: GTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAAT...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACTGGGTCAGCAGGTACTaGGTTTCATGCATGTCAACG +
Preference number: 4 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYWVSRY*VSCMST
Trigger: CGTTGACATGCATGAAACTCAGTACCTGCTGACCCA...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CATATCTACACACGGGAAAAAGTTAACATCACTCTGTGCACCTCCCCAGCCCGGGTGCCAAAAGGAATCTaGAGGGAGGTGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HIYTREKVNITLCTSPARVPKGI*REVESR
Trigger: TCTGCTTTCCACCTCCCTTCAGATTCCTTTTGGCAC...CCGGGCTGGGGAGGTGCACAGAGTGATGTTAACTTTTTCCCGTGTGTAGATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAACTCACCCTTTGGTTATaGCTGGTCAGGCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQLTLWL*LVRPEP
Trigger: GGGCTCAGGCCTGACCAGTCATAACCAAAGGGTGAG...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAGACAGGAAGGCCTGGTaGTGCTGGATGGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPDRKAW*CWMVSS
Trigger: GCTGGATACCATCCAGCAGCACCAGGCCTTCCTGTC...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCACAGCGATCTGGGCGATaGTGGATGCCGTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPQRSGR*WMPCSS
Trigger: AGAGCTACACGGCATCCAGCATCGCCCAGATCGCTG...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCACCTTTCTCTCCTGCTTaGACGAGGCTCTGCCGCACT +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPPFSPA*TRLCRT
Trigger: AGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGG...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGCCCCAGGGGACTATTaGTGTTGTCCTTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQAPGDY*CCPWHG
Trigger: GCCATGCCAAGGACAACAGCAATAGTCCCCTGGGGC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTAAGTCGATTGTCAGCTaGTTCTTTTCCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAKSIVS*FFSTGE
Trigger: CTCTCCTGTGGAAAAGAACCAGCTGACAATCGACTT...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGGACGGATGGGGAGATaGGGACACTGCTCACACATG +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQGRMGR*GHCSHM
Trigger: CATGTGTGAGCAGTGTCCCCATCTCCCCATCCGTCC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGACTGCATCCTCCACTCTaGGATGCTGTGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGLHPPL*DAVAGR
Trigger: CCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAG...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCAGCTCGTAGGTGGATaGGTCGCTCCTCTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNQLVGG*VAPLAG
Trigger: CCCCGCAAGAGGAGCGACTCATCCACCTACGAGCTG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAGGAACCGTCGATGCTaGAGACCACGAACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPRNRRC*RPRTLC
Trigger: GCACAGAGTTCGTGGTCTTCAGCATCGACGGTTCCT...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGTGAGGTTGAACAGTTaGGAAACTCGAGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGVRLNS*ETRVNK
Trigger: CTTGTTAACTCGAGTTTCTCAACTGTTCAACCTCAC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACTGCCCAGGGCACCTGTaGCATCCAGCATGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNCPGHL*HPAWWS
Trigger: GCTCCACCATGCTGGATGGCACAGGTGCCCTGGGCA...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCACGAGACTCTTCCAGGTaGTTCTCTGGATGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPLLVSERLVLPQEENVPRDSSR*FSGWLV
Trigger: GACCAGCCATCCAGAGAAGCACCTGGAAGAGTCTCG...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGAGCCCCCGCTGGGTCTTaGTTGACTGGAACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGAPAGS*LTGTAW
Trigger: CCAAGCTGTTCCAGTCAACCAAGACCCAGCGGGGGC...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCATCCAGGGCTGGGATaGCAGTCTTCCTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLHPGLG*QSSSRP
Trigger: TGGCCTTGAGGAAGACTGTCATCCCAGCCCTGGATG...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp AGCATGGTCCTTGTTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTAATATGAATAAACCCTaGAGGTTCCATCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SMVLVQARNEVMAACPEANMNKP*RFHPSR
Trigger: TCTGGAGGGATGGAACCTTCAGGGTTTATTCATATT...AGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAACAAGGACCATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGATCCTCCACTCTGAGATaGTGTGGCGGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGSSTLR*CGGKDS
Trigger: CGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGA...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGAGGGAGATGGGGACACTaGTCACACATGGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGGRWGH*SHMAQR
Trigger: TCTCTGGGCCATGTGTGAGCAGTGTCCCCATCTCCC...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTACCAGTAGCAGCACGTaGATCTTGGAGGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLTSSST*ILEGGA
Trigger: TGCACCGCCCTCCAAGATCCACGTGCTGCTACTGGT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGATGCCATCCAGCATGGTaGAGCTGCTGGAATGGCGTG +
Preference number: 4 (lower is better)
Translates to: LLVSERLVLPQEENVPKGCHPAW*SCWNGV
Trigger: CACGCCATTCCAGCAGCTCCACCATGCTGGATGGCA...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGGAATCTGAAGGGAGGTaGAAAGCAGACCTGGATACA +
Preference number: 4 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVESEGR*KADLDT
Trigger: TGTATCCAGGTCTGCTTTCCACCTCCCTTCAGATTC...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCATCAAATGCCAGGATaGCCCCGACGCAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNHQMPG*PRRSPQ
Trigger: TTGGGGACTGCGTCGGGGGCATCCTGGCATTTGATG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACGTTAACATCACTCTGTaGACCTCCCCAGCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNVNITL*TSPARS
Trigger: GGACCGGGCTGGGGAGGTGCACAGAGTGATGTTAAC...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCTGTCGGCAAACGTGTaGTCTCCCCTGACCACCATC +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNLSANV*SPLTTI
Trigger: GATGGTGGTCAGGGGAGACCACACGTTTGCCGACAG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTGCGTGCAGGACAGCATaGTCCTTGTTCAGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLACRTA*SLFRRE
Trigger: TTCTCGCCTGAACAAGGACCATGCTGTCCTGCACGC...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCTCACAGAAGGTTGTTaGGGACCAGGACACACGTGC +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNLTEGC*GPGHTC
Trigger: GCACGTGTGTCCTGGTCCTCAACAACCTTCTGTGAG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGTCTTATACTCGTTGTaGGGCACAGGGTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: LKDAALPLLVSERLVLPQVLYSL*GTGSLT
Trigger: TGTCAAAGACCCTGTGCCCCACAACGAGTATAAGAC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCTCGCTGAATCACTGTaGCAACTGCCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLLAESL*QLPPGT
Trigger: AGTACCAGGAGGCAGTTGCCACAGTGATTCAGCGAG...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTAAGGTCATGCCCTCCTaGGACTTGATGAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLKVMPS*DLMKSP
Trigger: TGGGGACTTCATCAAGTCCCAGGAGGGCATGACCTT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACCCCTTTGGTTATGACTaGTCAGGCCTGAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNPFGYD*SGLSPA
Trigger: TGCAGGGCTCAGGCCTGACCAGTCATAACCAAAGGG...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCATCCAGCTCCAAGATaGTGGAGTTGTCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLHPAPR*WSCHAS
Trigger: TGAGGCATGACAACTCCAGCATCTTGGAGCTGGATG...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR TCA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACAGAGGAAGAGGTCGGTaGTCTCAAAGTCAAACCTGC +
Preference number: 4 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNRGRGR*SQSQTC
Trigger: GCAGGTTTGACTTTGAGATCACCGACCTCTTCCTCT...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR GCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTAGCTGGGAATGTGCATaGCCACATGATACACCTTGT +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLSWECA*PHDTPC
Trigger: ACAAGGTGTATCATGTGGGCATGCACATTCCCAGCT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CCA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTTCCCGCTTCTTTAATTaGTGTAACAGACATGACGTT +
Preference number: 4 (lower is better)
Translates to: VFLKDAALPLLVSERLVLSRFFN*CNRHDV
Trigger: AACGTCATGTCTGTTACACCAATTAAAGAAGCGGGA...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
3UTR CAA 72 bp TATAGACCCACTTTTGCAGAACATTTACACGACCCTTaGGCTGTACATATCTACACACGGGAAAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: YRPTFAEHLHDP*AVHIYTREKVN
Trigger: GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTCTGCAAAAGTGGGTCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.9
CDS GCA 90 bp CGCTGGCCCCGCTGCTCGCCATCCGCCTGGCTCTGTGTCCGCTCGTaGCGGTGGCTGGGCCCGCTGGGCTGGGCCGAGATGGTGCGAAGC +
Preference number: 5 (lower is better)
Translates to: RWPRCSPSAWLCVRS*RWLGPLGWAEMVRS
Trigger: GCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACACAGAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp CGGCCCCAGCAGCCGGCCGCCACACTCATGCTGCGCTGGCCCCGCTaGTCGCCATCCGCCTGGCTCTGTGTCCGCTCGTGCCGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RPQQPAATLMLRWPR*SPSAWLCVRSCRWL
Trigger: CAGCCACCGGCACGAGCGGACACAGAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCGGCTGCTGGGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp GGCGGCCAGTCATGGCGCGGCCCCAGCAGCCGGCCGCCACACTCATaGTGCGCTGGCCCCGCTGCTCGCCATCCGCCTGGCTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: GGQSWRGPSSRPPHS*CAGPAARHPPGSVS
Trigger: GGACACAGAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCGGCTGCTGGGGCCGCGCCATGACTGGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp GGCCAGTCATGGCGCGGCCCCAGCAGCCGGCCGCCACACTCATGCTaGGCTGGCCCCGCTGCTCGCCATCCGCCTGGCTCTGTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: GQSWRGPSSRPPHSC*AGPAARHPPGSVSA
Trigger: AGCGGACACAGAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCGGCTGCTGGGGCCGCGCCATGACTGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 90 bp CCCCGCTGCTCGCCATCCGCCTGGCTCTGTGTCCGCTCGTGCCGGTaGCTGGGCCCGCTGGGCTGGGCCGAGATGGTGCGAAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PRCSPSAWLCVRSCR*LGPLGWAEMVRSRW
Trigger: CCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACACAGAGCCAGGCGGATGGCGAGCAGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp TCCGCTCGTGCCGGTGGCTGGGCCCGCTGGGCTGGGCCGAGATGGTaGGAAGCAGGTGGTTCCGGGAGCGCAGAAAGTCGCCCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: SARAGGWARWAGPRW*EAGGSGSAESRPGR
Trigger: CCGGCCAGGGCGACTTTCTGCGCTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 90 bp CGGTGGCTGGGCCCGCTGGGCTGGGCCGAGATGGTGCGAAGCAGGTaGTTCCGGGAGCGCAGAAAGTCGCCCTGGCCGGGCAGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: RWLGPLGWAEMVRSR*FRERRKSPWPGRPK
Trigger: CTTCGGCCTGCCCGGCCAGGGCGACTTTCTGCGCTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 90 bp GTGTCCGCTCGTGCCGGTGGCTGGGCCCGCTGGGCTGGGCCGAGATaGTGCGAAGCAGGTGGTTCCGGGAGCGCAGAAAGTCGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VSARAGGWARWAGPR*CEAGGSGSAESRPG
Trigger: GCCAGGGCGACTTTCTGCGCTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 90 bp CATCCGCCTGGCTCTGTGTCCGCTCGTGCCGGTGGCTGGGCCCGCTaGGCTGGGCCGAGATGGTGCGAAGCAGGTGGTTCCGGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: HPPGSVSARAGGWAR*AGPRWCEAGGSGSA
Trigger: TGCGCTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACACAGAGCCAGGCGGATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 90 bp GCCTGGCTCTGTGTCCGCTCGTGCCGGTGGCTGGGCCCGCTGGGCTaGGCCGAGATGGTGCGAAGCAGGTGGTTCCGGGAGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: AWLCVRSCRWLGPLG*AEMVRSRWFRERRK
Trigger: CTTTCTGCGCTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACACAGAGCCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS-3UTR CAA 90 bp GGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCATCCCGCGGGGCCATCTaGTCGGCCACGGCCACATCA +
Preference number: 5 (lower is better)
Translates to: GHTELRLPPAGPSCRPRPSRGAI*SATATS
Trigger: TGATGTGGCCGTGGCCGACAAGATGGCCCCGCGGGA...TGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS GCA 90 bp TGCTCTCCAGGCTGGAGCCACCACTACTGCCACCACCACCACTGCTaGCACCACCGCCACCGCCGCCACCGCCACCACCGCAGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CSPGWSHHYCHHHHC*HHRHRRHRHHRSSV
Trigger: CACACTGCTGCGGTGGTGGCGGTGGCGGCGGTGGCGGTGGTGGCAGCAGTGGTGGTGGTGGCAGTAGTGGTGGCTCCAGCCTGGAGAGCA
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp GACTGCTCTCCAGGCTGGAGCCACCACTACTGCCACCACCACCACTaGTGCCACCACCGCCACCGCCGCCACCGCCACCACCGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: DCSPGWSHHYCHHHH*CHHRHRRHRHHRSS
Trigger: ACTGCTGCGGTGGTGGCGGTGGCGGCGGTGGCGGTGGTGGCAGCAGTGGTGGTGGTGGCAGTAGTGGTGGCTCCAGCCTGGAGAGCAGTC
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp TTCGGCTCAGGTGCCGACTGCTCTCCAGGCTGGAGCCACCACTACTaGCACCACCACCACTGCTGCCACCACCGCCACCGCCGCCACCGC +
Preference number: 5 (lower is better)
Translates to: FGSGADCSPGWSHHY*HHHHCCHHRHRRHR
Trigger: GCGGTGGCGGCGGTGGCGGTGGTGGCAGCAGTGGTGGTGGTGGCAGTAGTGGTGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCCGAA
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp AGGGGCAGTGCCCGGCGAGGAGGGGGCGCCATGCTCTTGGAAGGCTaGATTGTGGGTCTGGAGCACATCCGACTCGGCACAGCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: RGSARRGGGAMLLEG*IVGLEHIRLGTARA
Trigger: CGCCCGGGCTGTGCCGAGTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 90 bp GCACATCCGACTCGGCACAGCCCGGGCGGGGCCCGTCTTGCCAGGTaGGCGCGGGAACAGGCATACTGGTTTCCAGGAAGCCGTCCCCGT +
Preference number: 5 (lower is better)
Translates to: AHPTRHSPGGARLAR*AREQAYWFPGSRPR
Trigger: ACGGGGACGGCTTCCTGGAAACCAGTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGCCCCGCCCGGGCTGTGCCGAGTCGGATGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACTCACGGTGCCCTACTaGGGGCCCGCGGCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGLTVPY*GPAAAP
Trigger: GGGGGCAGCCGCGGGCCCCAAGTAGGGCACCGTGAG...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp TGGAGCAGCCATCCCCCAGCGGGTAGCGTTGGTAGCGGGGGACGCTaGAAGGCGGCAGGGCGTGAAAGCGCCGTTCCAGCAGCGGCTCCA +
Preference number: 5 (lower is better)
Translates to: WSSHPPAGSVGSGGR*KAAGRESAVPAAAP
Trigger: TGGAGCCGCTGCTGGAACGGCGCTTTCACGCCCTGCCGCCTTTCAGCGTCCCCCGCTACCAACGCTACCCGCTGGGGGATGGCTGCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp GTCTGGAGCACATCCGACTCGGCACAGCCCGGGCGGGGCCCGTCTTaGCAGGTGGGCGCGGGAACAGGCATACTGGTTTCCAGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: VWSTSDSAQPGRGPS*QVGAGTGILVSRKP
Trigger: CGGCTTCCTGGAAACCAGTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGCCCCGCCCGGGCTGTGCCGAGTCGGATGTGCTCCAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 90 bp GCTGCCACCACCGCCACCGCCGCCACCGCCACCACCGCAGCAGTGTaGTGCATTCATCAGGATGCCCGGGGACAGCAGGTCATTGTCCTG +
Preference number: 5 (lower is better)
Translates to: AATTATAATATTAAV*CIHQDARGQQVIVL
Trigger: CAGGACAATGACCTGCTGTCCCCGGGCATCCTGATGAATGCAGCACACTGCTGCGGTGGTGGCGGTGGCGGCGGTGGCGGTGGTGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp AAGCCACGACTGGCAGGGGCAGTGCCCGGCGAGGAGGGGGCGCCATaGTCTTGGAAGGCTGCATTGTGGGTCTGGAGCACATCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: KPRLAGAVPGEEGAP*SWKAALWVWSTSAS
Trigger: GCTGGCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGCCCCTGCCAGTCGTGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS CCA 90 bp CGACTGGCAGGGGCAGTGCCCGGCGAGGAGGGGGCGCCATGCTCTTaGAAGGCTGCATTGTGGGTCTGGAGCACATCCGACTCGGCACAG +
Preference number: 5 (lower is better)
Translates to: RLAGAVPGEEGAPCS*KAALWVWSTSDSAQ
Trigger: CTGTGCCGAGTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGCCCCTGCCAGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCGGCCTGCCTCACCCTTaGGTTATGACTGGTCAGGCC +
Preference number: 5 (lower is better)
Translates to: TRQARGREAGQGALCGAAGLPHP*VMTGQA
Trigger: GGCCTGACCAGTCATAACCAAAGGGTGAGGCAGGCC...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCACAGAGGCTCCCCGCTaGGACGACCGAGACGACTTG +
Preference number: 5 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGTEAPR*DDRDDL
Trigger: CAAGTCGTCTCGGTCGTCCAAGCGGGGAGCCTCTGT...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS GCA 90 bp GCCACCACCGCCACCGCCGCCACCGCCACCACCGCAGCAGTGTGCTaGATTCATCAGGATGCCCGGGGACAGCAGGTCATTGTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: ATTATAATATTAAVC*IHQDARGQQVIVLH
Trigger: ATGCAGGACAATGACCTGCTGTCCCCGGGCATCCTGATGAATGCAGCACACTGCTGCGGTGGTGGCGGTGGCGGCGGTGGCGGTGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 90 bp AAGCCACGACTGGCAGGGGCAGTGCCCGGCGAGGAGGGGGCGCCATaGTCTTGGAAGGCTGCATTGTGGGTCTGGAGCACATCCGACTCG +
Preference number: 5 (lower is better)
Translates to: KPRLAGAVPGEEGAP*SWKAALWVWSTSDS
Trigger: CGAGTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGCCCCTGCCAGTCGTGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 90 bp ACCAGGCCTGCCGGTGAGCCCGCACCATCACCCTCCGTAGTCCTGTaGCCCATGGGGATCAGAGAGGGAGAGACGAGGGGAGGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: TRPAGEPAPSPSVVL*PMGIREGETRGGRS
Trigger: TGACCTCCCTCCCCTCGTCTCTCCCTCTCTGATCCCCATGGGGCACAGGACTACGGAGGGTGATGGTGCGGGCTCACCGGCAGGCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436074.6
CDS-3UTR CAA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAACCCCAGCGGGTAGCGTaGGTAGCGGGGGACGCTGAA +
Preference number: 5 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQPQRVA*VAGDAE
Trigger: TTCAGCGTCCCCCGCTACCAACGCTACCCGCTGGGG...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAAACGCCATGGGGGAAGTaGTGCTGGGCCAGCCACGCC +
Preference number: 5 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQTPWGK*CWASHA
Trigger: GGCGTGGCTGGCCCAGCACAACTTCCCCCATGGCGT...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCAGAAATTCAGTGGGATaGCCGGGGCCAGGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: TRQARGREAGQGALCGAARNSVG*PGPGEA
Trigger: TGCCTCACCTGGCCCCGGCAATCCCACTGAATTTCT...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 90 bp CTGCCCAGGGCACCTGTGCCATCCAGCATGGTGGAGCTGCTGGAATaGCGTGAGCAGGGCTCAGTCCTCAGCACGCTGGCATGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LPRAPVPSSMVELLE*REQGSVLSTLAWRL
Trigger: CAGCCTCCATGCCAGCGTGCTGAGGACTGAGCCCTGCTCACGCCATTCCAGCAGCTCCACCATGCTGGATGGCACAGGTGCCCTGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS-3UTR CAA 90 bp ACCCGTCAGGCCCGAGGACGTGAGGCAGGGCAGGGAGCACTGTGTGGTGCGGCCTCCACCTTGCAGAGCTaGTATGCGCACATGATGGGG +
Preference number: 5 (lower is better)
Translates to: TRQARGREAGQGALCGAASTLQS*YAHMMG
Trigger: CCCCATCATGTGCGCATACAAGCTCTGCAAGGTGGA...GGCCGCACCACACAGTGCTCCCTGCCCTGCCTCACGTCCTCGGGCCTGACGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp CAGGGCACCTGTGCCATCCAGCATGGTGGAGCTGCTGGAATGGCGTaGGCAGGGCTCAGTCCTCAGCACGCTGGCATGGAGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: QGTCAIQHGGAAGMA*AGLSPQHAGMEAGQ
Trigger: CTGTCCAGCCTCCATGCCAGCGTGCTGAGGACTGAGCCCTGCTCACGCCATTCCAGCAGCTCCACCATGCTGGATGGCACAGGTGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS TCA 90 bp ATGCCGTGTAGCTCTCAGCCATGCCTGACACCTGGCTGGCGATGCTaGTCTCACTGGCTCGGCGGAAGCCACGACTGGCAGGGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: MPCSSQPCLTPGWRC*SHWLGGSHDWQGQC
Trigger: GCACTGCCCCTGCCAGTCGTGGCTTCCGCCGAGCCAGTGAGATCAGCATCGCCAGCCAGGTGTCAGGCATGGCTGAGAGCTACACGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS TCA 90 bp GGCCTTCTGGGCGATGCTGGATGCCGTGTAGCTCTCAGCCATGCCTaGCACCTGGCTGGCGATGCTGATCTCACTGGCTCGGCGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GLLGDAGCRVALSHA*HLAGDADLTGSAEA
Trigger: GGCTTCCGCCGAGCCAGTGAGATCAGCATCGCCAGCCAGGTGTCAGGCATGGCTGAGAGCTACACGGCATCCAGCATCGCCCAGAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS GCA 90 bp CTGGGCTCCGGGGGCTCCCCAGAGGTCTGGTCCGAGACGGCTTCGTaGTTGACGAGCTCAGTGGCCTCCTCACCATCCTCATTGAACTGG +
Preference number: 5 (lower is better)
Translates to: LGSGGSPEVWSETAS*LTSSVASSPSSLNW
Trigger: CCAGTTCAATGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCTCGGACCAGACCTCTGGGGAGCCCCCGGAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS-3UTR CAA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGAGAGACGGCTTCGTGCTaGACGAGCTCAGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGETASC*TSSVAS
Trigger: GGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCTC...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp TTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGAGACGGCTTCGTGCTaGACGAGCTCAGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLDTLSSACLPRGHLVGHETASC*TSSVAS
Trigger: GGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCTC...GTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp AACACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGATCTGGCCCCACCACTTaGCAGCGATCTGGGCGATGC +
Preference number: 5 (lower is better)
Translates to: NTRPRSAVASRGQSLVAGSGPTT*QRSGRC
Trigger: GCATCGCCCAGATCGCTGCAAAGTGGTGGGGCCAGA...TCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp AGCGATCTGGGCGATGCTGGATGCCGTGTAGCTCTCAGCCATGCCTaGCACCTGGCTGGCGATGCTGATCTCACTGGCTCGGCGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SDLGDAGCRVALSHA*HLAGDADLTGSAEA
Trigger: GGCTTCCGCCGAGCCAGTGAGATCAGCATCGCCAGCCAGGTGTCAGGCATGGCTGAGAGCTACACGGCATCCAGCATCGCCCAGATCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp AGATGCTGTGGCGGGAAGGACTCGCTGGAAGGCAAAACCCCAGATTaGCCGCCAACTGGAGAGGAAGGGCCCAGAGGCTGCCCTGAGCCG +
Preference number: 5 (lower is better)
Translates to: RCCGGKDSLEGKTPD*PPTGEEGPRGCPEP
Trigger: CGGCTCAGGGCAGCCTCTGGGCCCTTCCTCTCCAGTTGGCGGTCAATCTGGGGTTTTGCCTTCCAGCGAGTCCTTCCCGCCACAGCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS CCA 90 bp GGCGGTGCGACTCAGGGATGGTGTAGGAGACACGCCCACTGTTGTTaGTCACCAGCGTATCCAGGTAGAGCCACTCGCCTGAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GGATQGWCRRHAHCC*SPAYPGRATRLRAA
Trigger: AGCCGCCCTCAGGCGAGTGGCTCTACCTGGATACGCTGGTGACCAACAACAGTGGGCGTGTCTCCTACACCATCCCTGAGTCGCACCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS-3UTR CAA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACACTCCTCCACGGTCATaGGCAGAGGAATCCGATATT +
Preference number: 5 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHTPPRS*AEESDI
Trigger: AATATCGGATTCCTCTGCCAATGACCGTGGAGGAGT...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp TACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCAACCCGCAGGGCTGCCTaGGGCAGGATGGAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: YQDSFIGHTELRLPPAGPTRRAA*GRMERN
Trigger: GTTCCGCTCCATCCTGCCCAAGGCAGCCCTGCGGGT...TGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCTCCACAGGAGAGAGGTaGAACACGTCGGGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGSTGER*NTSGFS
Trigger: AGAAAACCCCGACGTGTTCAACCTCTCTCCTGTGGA...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTGGCCCCCGCTGGGTCTaGGTTGACTGGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKAGPRWV*VDWNSL
Trigger: CAAGCTGTTCCAGTCAACCAAGACCCAGCGGGGGCC...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCCACTTGTCCATGAGGTCATaGGAGCTCCACTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: DTLSSACLPRGHLVGHGHLSMRS*ELHLVM
Trigger: CATCACCAAGTGGAGCTCCAATGACCTCATGGACAA...GTGGCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp AGAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGAGCAGCACGTGGATCTaGGAGGGCGGTGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: REGRRSDPACRTAWSLFRSSTWI*EGGAAS
Trigger: GCTGGCTGCACCGCCCTCCAAGATCCACGTGCTGCT...CCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCCGGGGCAGTTGCCTTTaGGGGTCCTCAGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGRGSCL*GSSVPL
Trigger: CAACGGCACTGAGGACCCCAAAAGGCAACTGCCCCG...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp CTGTCAAAGGAGGAGAAATGGGTCCCTAGGCTCACAGAAGGTTGTTaGGGACCAGGACACACGTGCCAGCATCCCCGCTCGGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: LSKEEKWVPRLTEGC*GPGHTCQHPRSARP
Trigger: CGGCCGCGCCGAGCGGGGATGCTGGCACGTGTGTCCTGGTCCTCAACAACCTTCTGTGAGCCTAGGGACCCATTTCTCCTCCTTTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS-3UTR CAA 90 bp TTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCCACGGCATGGGGAACTGCAAGTaGGGACTTCTAGGCAAGGTT +
Preference number: 5 (lower is better)
Translates to: LDTLSSACLPRGHLVGHGMGNCK*GLLGKV
Trigger: AACCTTGCCTAGAAGTCCCAACTTGCAGTTCCCCAT...GCCGTGGCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp CCTGACAGGGGCTGTGATTGTCGGGCCAAGCAACTTCCTGCTGGGAGCAGGGGGGACGACCGAGACGACTaGGAGGATGTGGACCACTGT +
Preference number: 5 (lower is better)
Translates to: PDRGCDCRAKQLPAGSRGDDRDD*EDVDHC
Trigger: ACAGTGGTCCACATCCTCCAAGTCGTCTCGGTCGTC...CCCCCTGCTCCCAGCAGGAAGTTGCTTGGCCCGACAATCACAGCCCCTGTCAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTCTATTGCTGTTGTCCTaGGCATGGCTGGCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKALLLLS*AWLAAG
Trigger: CCCAGCCGCCAGCCATGCCAAGGACAACAGCAATAG...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 90 bp TCTCATCCGAGTCCCTGGCAATACTCTGCATCCTCCACTCTGAGATaGTGTGGCGGGAAGGACTCGCTCCCCGCTTGGACGACCGAGACG +
Preference number: 5 (lower is better)
Translates to: SHPSPWQYSASSTLR*CGGKDSLPAWTTET
Trigger: CGTCTCGGTCGTCCAAGCGGGGAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGACTCGGATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
CDS GCA 90 bp CTGACTCTCAGACACCGGCTGGTTACTGTAGCACAGGGCATCAAATaGCAGGATGCCCCCGACGCAGTCCCCAATCAGGCAGACCTGCCC +
Preference number: 5 (lower is better)
Translates to: LTLRHRLVTVAQGIK*QDAPDAVPNQADLP
Trigger: GGGCAGGTCTGCCTGATTGGGGACTGCGTCGGGGGCATCCTGGCATTTGATGCCCTGTGCTACAGTAACCAGCCGGTGTCTGAGAGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 90 bp CAGCGCAGGAGCCTGCACGGAAGTGTGGGGCCCAGGCAGGGGCTTTaGGAGGCTGTACCCATGTTGCAGGTCAAACTAAAGTCACTGCCT +
Preference number: 5 (lower is better)
Translates to: QRRSLHGSVGPRQGL*EAVPMLQVKLKSLP
Trigger: AGGCAGTGACTTTAGTTTGACCTGCAACATGGGTACAGCCTCCCAAAGCCCCTGCCTGGGCCCCACACTTCCGTGCAGGCTCCTGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436074.6
CDS CCA 90 bp ACAGATGTTCCAGTGAGGTCTCCTTTGAAGAATCCCGACTCTGGGTaGGGGAGGCAGGTAGGCCGGGGTGTTTGGAGAGGCACCCAGCCC +
Preference number: 5 (lower is better)
Translates to: TDVPVRSPLKNPDSG*GRQVGRGVWRGTQP
Trigger: GGGCTGGGTGCCTCTCCAAACACCCCGGCCTACCTGCCTCCCCCACCCAGAGTCGGGATTCTTCAAAGGAGACCTCACTGGAACATCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542210.1
CDS-3UTR CAA 90 bp CTCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGGGCCCCCGCTGGGTCTaGGTTGACTGGAACAGCTTG +
Preference number: 5 (lower is better)
Translates to: LYQDSFIGHTELRLPPAGGPRWV*VDWNSL
Trigger: CAAGCTGTTCCAGTCAACCAAGACCCAGCGGGGGCC...CCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTGTGGACCACTGTTTCTaGAGGCCGCGCCCCACTAGG +
Preference number: 5 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCVDHCF*RPRPTR
Trigger: CCTAGTGGGGCGCGGCCTCAAGAAACAGTGGTCCAC...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGTGGACCACTGTTTCTaGAGGCCGCGCCCCACTAGG +
Preference number: 5 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVVDHCF*RPRPTR
Trigger: CCTAGTGGGGCGCGGCCTCAAGAAACAGTGGTCCAC...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp GTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGCGACGACCGAGACGACTaGGAGGATGTGGACCACTGT +
Preference number: 5 (lower is better)
Translates to: VLLDTLSSACLPRGHLVGDDRDD*EDVDHC
Trigger: ACAGTGGTCCACATCCTCCAAGTCGTCTCGGTCGTC...GCCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp CACGGGACCCAGAACCAGGCTGGACTCCGTCACAGTGCTGGGTGTTTTCAGTGTGCCTTTCTCTCCTGCTaGCACGAGGCTCTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: HGTQNQAGLRHSAGCFQCAFLSC*HEALPH
Trigger: GTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC...ACACTGAAAACACCCAGCACTGTGACGGAGTCCAGCCTGGTTCTGGGTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp CCCACTGTTGTTGGTCACCAGCGTATCCAGGTAGAGCCACTCGCCTaGGGGCGGCTGGGTCATGATGTGCACATCCACCTTCTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: PTVVGHQRIQVEPLA*GRLGHDVHIHLLPS
Trigger: ACTGGGGAGAAGGTGGATGTGCACATCATGACCCAGCCGCCCTCAGGCGAGTGGCTCTACCTGGATACGCTGGTGACCAACAACAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS-3UTR CAA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTGCTCACAGAAGGTTGTaGAGGACCAGGACACACGTG +
Preference number: 5 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKAAHRRL*RTRTHV
Trigger: CACGTGTGTCCTGGTCCTCAACAACCTTCTGTGAGC...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTGGACTCGCTCCCCGCTaGGACGACCGAGACGACTTG +
Preference number: 5 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAGLAPR*DDRDDL
Trigger: CAAGTCGTCTCGGTCGTCCAAGCGGGGAGCGAGTCC...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGCGGTACAGACCATCTaGTGTGTCTTCCGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: AWGCGGSGTKASILTGLGAVQTI*CVFRLW
Trigger: CCAGAGCCGGAAGACACACAAGATGGTCTGTACCGC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTATTCTAACAGGCCTGGGGGATGAGTCGCTCCTCTaGCGGGGCAGTTGCCTTTTG +
Preference number: 5 (lower is better)
Translates to: AWGCGGSGTKASILTGLGDESLL*RGSCLL
Trigger: CAAAAGGCAACTGCCCCGCAAGAGGAGCGACTCATC...CCCCAGGCCTGTTAGAATAGAAGCCTTAGTCCCACTCCCACCACACCCCCACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GCCTTTCTCTCCTGCTTGCACGAGGCTCTGCCGCACTGGAGCCTTCAGTGTGGTTTGGCAAGGGCATCATaGATCCGGTGGTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: AFLSCLHEALPHWSLQCGLARAS*IRWLAV
Trigger: GACGGCCAACCACCGGATCAATGATGCCCTTGCCAA...ACCACACTGAAGGCTCCAGTGCGGCAGAGCCTCGTGCAAGCAGGAGAGAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 90 bp TCCGAGTCCCTGGCAATACTCTGCATCCTCCACTCTGAGATGCTGTaGCGGGAAGGACTCGCTGGAAGGCAAAACCCCAGATTGACCGCC +
Preference number: 5 (lower is better)
Translates to: SESLAILCILHSEML*REGLAGRQNPRLTA
Trigger: GGCGGTCAATCTGGGGTTTTGCCTTCCAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGACTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTACCCGCAGGGCTGCCTaGGGCAGGATGGAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: REMKSWLPALKLTKQVVATRRAA*GRMERN
Trigger: GTTCCGCTCCATCCTGCCCAAGGCAGCCCTGCGGGT...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACGGGTCCTCAGTGCCGTaGCTGCGGGGGATGTCGACG +
Preference number: 5 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYGSSVP*LRGMST
Trigger: CGTCGACATCCCCCGCAGCAACGGCACTGAGGACCC...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 90 bp CCACCCTTGCCCCACGACCCACCTGTATCATGTACAGCTGGGCGATaGGGTACTCCTCCACGGTCATTGGCAGAGGAATCCGATATTCCT +
Preference number: 5 (lower is better)
Translates to: PPLPHDPPVSCTAGR*GTPPRSLAEESDIP
Trigger: AGGAATATCGGATTCCTCTGCCAATGACCGTGGAGGAGTACCGCATCGCCCAGCTGTACATGATACAGGTGGGTCGTGGGGCAAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535289.1
CDS GCA 90 bp TCGGCGGCCCAGGCTCCCACCTCTCCAAGCTGCTCTCACGCCCCCTaGGGCTCCTTTCAAGTTAAGTCACCACTACGTGAAGTTATACTT +
Preference number: 5 (lower is better)
Translates to: SAAQAPTSPSCSHAP*GSFQVKSPLREVIL
Trigger: AAGTATAACTTCACGTAGTGGTGACTTAACTTGAAAGGAGCCGCAGGGGGCGTGAGAGCAGCTTGGAGAGGTGGGAGCCTGGGCCGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541244.1
CDS CCA 90 bp AAAGACAGATGTTCCAGTGAGGTCTCCTTTGAAGAATCCCGACTCTaGGTGGGGGAGGCAGGTAGGCCGGGGTGTTTGGAGAGGCACCCA +
Preference number: 5 (lower is better)
Translates to: KDRCSSEVSFEESRL*VGEAGRPGCLERHP
Trigger: TGGGTGCCTCTCCAAACACCCCGGCCTACCTGCCTCCCCCACCCAGAGTCGGGATTCTTCAAAGGAGACCTCACTGGAACATCTGTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542210.1
CDS-3UTR CAA 90 bp AAAGAGAAGGCAGGTGGTGGGGCGTGGGGGTGTGGTGGGAGTGGGACTAAGGCTTCTGTCTTATACTCGTaGTGGGGCACAGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: KEKAGGGAWGCGGSGTKASVLYS*WGTGSL
Trigger: CAAAGACCCTGTGCCCCACAACGAGTATAAGACAGA...AGCCTTAGTCCCACTCCCACCACACCCCCACGCCCCACCACCTGCCTTCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCTCCACCTTGCAGAGCTaGTATGCGCACATGATGGGG +
Preference number: 5 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVSTLQS*YAHMMG
Trigger: CCCCATCATGTGCGCATACAAGCTCTGCAAGGTGGA...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp AAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGCGGTACAGACCATCTaGTGTGTCTTCCGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KTVLLDTLSSACLPRGHLAVQTI*CVFRLW
Trigger: CCAGAGCCGGAAGACACACAAGATGGTCTGTACCGC...AAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp CAGGTGGGCAGGGTCCGGGGTGCAGAAATTAAGATACAGCCTTTCTCTCCTGCTGGGGACAGCAGGTCATaGTCCTGCATGCTGACCACG +
Preference number: 5 (lower is better)
Translates to: QVGRVRGAEIKIQPFSPAGDSRS*SCMLTT
Trigger: CGTGGTCAGCATGCAGGACAATGACCTGCTGTCCCC...AGCAGGAGAGAAAGGCTGTATCTTAATTTCTGCACCCCGGACCCTGCCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GAGAGGGCAGACGGTCAGACCCAGCGTGCAGGACAGCATGGTCCTTGTTCAGGCTCCAAGATGCTGGAGTaGTCATGCCTCATGACCTGT +
Preference number: 5 (lower is better)
Translates to: ERADGQTQRAGQHGPCSGSKMLE*SCLMTC
Trigger: ACAGGTCATGAGGCATGACAACTCCAGCATCTTGGA...GCCTGAACAAGGACCATGCTGTCCTGCACGCTGGGTCTGACCGTCTGCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGTTCACGTGGGTCCGCTaGCGCTGCCACTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGFTWVR*RCHFSL
Trigger: AAGGGAGAAGTGGCAGCGCAAGCGGACCCACGTGAA...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGTCATTGATCCGGTGGTaGGCCGTCACGTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGSLIRW*AVTFRS
Trigger: GCTGCGGAACGTGACGGCCAACCACCGGATCAATGA...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGCAGGCTGGACCCCTGTaGGAGCTGCTACCAAATGGG +
Preference number: 5 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGQAGPL*ELLPNG
Trigger: CCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTG...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GTTGAGAAACTCGAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACGCCTCCCGGCCTTTATaGCAGGAGGGCCCGAGACTC +
Preference number: 5 (lower is better)
Translates to: VEKLELTRCRLDPCWSCYASRPL*QEGPRL
Trigger: GAGTCTCGGGCCCTCCTGCAATAAAGGCCGGGAGGC...GTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTCGAGTTTCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTAGGCAAAACCCCAGATaGACCGCCAACTGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: QDSFIGHTELRLPPAGPSRQNPR*TANWRG
Trigger: TCCTCTCCAGTTGGCGGTCAATCTGGGGTTTTGCCT...AGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS CCA 90 bp TCGTGCTTGACGAGCTCAGTGGCCTCCTCACCATCCTCATTGAACTaGGCCATCTTACGGGAAAGCATGAGCTGTGCCTCCTTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SCLTSSVASSPSSLN*AILRESMSCASFSS
Trigger: GCTGGAGAAGGAGGCACAGCTCATGCTTTCCCGTAAGATGGCCCAGTTCAATGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS-3UTR CAA 90 bp CTCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGGGGAAGACCTGCTTCTaGTACTCCTCGATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LYQDSFIGHTELRLPPAGGKTCF*YSSIQF
Trigger: GAACTGGATCGAGGAGTACAAGAAGCAGGTCTTCCC...CCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGAG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTGGGGGCGCCATGCTCTaGGAAGGCTGCATTGTGGGT +
Preference number: 5 (lower is better)
Translates to: REMKSWLPALKLTKQVVAGGAML*EGCIVG
Trigger: ACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCC...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp AGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCGGACCAAGACAGTTTTATaGGACACACTGAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: SFIGHTELRLPPAGPSCRTKTVL*DTLSSA
Trigger: GGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGT...CCGACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS TCA 90 bp CTCTGTGTCGGACAGGTCCTCGTGCGCATCGAAGAACTCATCATCTaGGCTCTCATCCGAGTCCCTGGCAATACTCTGCATCCTCCACTC +
Preference number: 5 (lower is better)
Translates to: LCVGQVLVRIEELII*ALIRVPGNTLHPPL
Trigger: GAGTGGAGGATGCAGAGTATTGCCAGGGACTCGGATGAGAGCTCAGATGATGAGTTCTTCGATGCGCACGAGGACCTGTCCGACACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS TCA 90 bp CTGTCAAAGGAGGAGAAATGGGTCCCTAGGCTCACAGAAGGTTGTTaGGGACCAGGACACACGTGCCAGCATCTGCCTTCCCTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LSKEEKWVPRLTEGC*GPGHTCQHLPSLQK
Trigger: CTTCTGGAGGGAAGGCAGATGCTGGCACGTGTGTCCTGGTCCTCAACAACCTTCTGTGAGCCTAGGGACCCATTTCTCCTCCTTTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542210.1
CDS-3UTR CAA 90 bp CTCTACCAAGACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGTCTGTCTTATACTCGTaGTGGGGCACAGGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LYQDSFIGHTELRLPPAGSVLYS*WGTGSL
Trigger: CAAAGACCCTGTGCCCCACAACGAGTATAAGACAGA...CCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGTCTTGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCCACTTGGTGATGTCCTaGGGGAACATTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVHLVMS*GNISSV
Trigger: CACAGAGGAAATGTTCCCCAAGGACATCACCAAGTG...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGGAAGAGGTTGTAGACTaGCTGGCAGGCCGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVEEVVD*LAGRPQ
Trigger: CTGCGGCCGGCCTGCCAGCAAGTCTACAACCTCTTC...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp ACCAGACCCAGGTCGGCCGTAGCTTCTCGGGGACAGAGCCTGGTCGCTGGACAACATTTACACGACCCTTaGGCTGTACATATCTACACA +
Preference number: 5 (lower is better)
Translates to: TRPRSAVASRGQSLVAGQHLHDP*AVHIYT
Trigger: TGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATG...TTGTCCAGCGACCAGGCTCTGTCCCCGAGAAGCTACGGCCGACCTGGGTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp CACAATTCACACTTACCAGGAAGTTCTGGGGCAGGCACTGCACTGTaGAGGCCACAACTCCACCTAACCCACATGTGGTGTCTGTGCGCT +
Preference number: 5 (lower is better)
Translates to: HNSHLPGSSGAGTAL*RPQLHLTHMWCLCA
Trigger: AGCGCACAGACACCACATGTGGGTTAGGTGGAGTTGTGGCCTTCACAGTGCAGTGCCTGCCCCAGAACTTCCTGGTAAGTGTGAATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535289.1
CDS GCA 90 bp GGTCCAGCACAATTCACACTTACCAGGAAGTTCTGGGGCAGGCACTaGACTGTGAAGGCCACAACTCCACCTAACCCACATGTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GPAQFTLTRKFWGRH*TVKATTPPNPHVVS
Trigger: AGACACCACATGTGGGTTAGGTGGAGTTGTGGCCTTCACAGTGCAGTGCCTGCCCCAGAACTTCCTGGTAAGTGTGAATTGTGCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535289.1
CDS-3UTR CAA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGTCCACAGGAGAGAGGTaGAACACGTCGGGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGSTGER*NTSGFS
Trigger: AGAAAACCCCGACGTGTTCAACCTCTCTCCTGTGGA...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTTGGGGGCCGTCCTCATaGGCAAGGGCATCATTGATC +
Preference number: 5 (lower is better)
Translates to: REMKSWLPALKLTKQVVAWGPSS*ARASLI
Trigger: GATCAATGATGCCCTTGCCAATGAGGACGGCCCCCA...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTCTGGCACCAGGACACTaGGAGATCCACACAGGGCAA +
Preference number: 5 (lower is better)
Translates to: REMKSWLPALKLTKQVVALAPGH*EIHTGQ
Trigger: TTGCCCTGTGTGGATCTCCAAGTGTCCTGGTGCCAG...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp ACAGTTTTATTGGACACACTGAGCTCCGCCTGCCTCCCGCGGGGCCATCTTGTCTCCTTTATAATCATCTaGGAGTCCAAGCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: TVLLDTLSSACLPRGHLVSFIII*ESKPSR
Trigger: ACGGGAAGGCTTGGACTCCAAGATGATTATAAAGGA...GACAAGATGGCCCCGCGGGAGGCAGGCGGAGCTCAGTGTGTCCAATAAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS-3UTR CAA 90 bp CGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTGTGGCTGGGAAGACCTGCTTCTaGTACTCCTCGATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: REMKSWLPALKLTKQVVAGKTCF*YSSIQF
Trigger: GAACTGGATCGAGGAGTACAAGAAGCAGGTCTTCCC...AGCCACAACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGACGGGGGATGTCGACGTaGCTTCGGCTCAGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: LLVSERLVLPQEENVPKGRGMST*LRLRCR
Trigger: TCGGCACCTGAGCCGAAGCAACGTCGACATCCCCCG...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GAACATTTACACGACCCTTTGGCTGTACATATCTACACACGGGAAAAAGTTAACTTAGCATCGCCCTTCTaGGAGCTGGGGTCCCCGGCG +
Preference number: 5 (lower is better)
Translates to: EHLHDPLAVHIYTREKVNLASPF*ELGSPA
Trigger: CGCCGGGGACCCCAGCTCCAAGAAGGGCGATGCTAA...GTTAACTTTTTCCCGTGTGTAGATATGTACAGCCAAAGGGTCGTGTAAATGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGACACGCCCACTGTaGTTGGTCACCAGCGTATCC +
Preference number: 5 (lower is better)
Translates to: LKDAALPLLVSERLVLPQETRPL*LVTSVS
Trigger: GGATACGCTGGTGACCAACAACAGTGGGCGTGTCTC...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GAGTTAACAAGATGCAGGCTGGACCCCTGTTGGAGCTGCTACCAAATGGGAGGGGTAACAGACATGACGTaGTATACAGAGCACACTCAG +
Preference number: 5 (lower is better)
Translates to: ELTRCRLDPCWSCYQMGGVTDMT*YTEHTQ
Trigger: CTGAGTGTGCTCTGTATACAACGTCATGTCTGTTAC...CCCTCCCATTTGGTAGCAGCTCCAACAGGGGTCCAGCCTGCATCTTGTTAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 90 bp GTTGACTGGAACAGCTTGGGGTCCTCTTCTGTCTTATACTCGTTGTaGGGCACAGGGTCTTTGACAATGTCGATGAAGTCGATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: VDWNSLGSSSVLYSL*GTGSLTMSMKSIVS
Trigger: GCTGACAATCGACTTCATCGACATTGTCAAAGACCCTGTGCCCCACAACGAGTATAAGACAGAAGAGGACCCCAAGCTGTTCCAGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000546049.5
CDS-3UTR CAA 90 bp GCCATAGGAGGTGGTAATGGGTCTCCGCTCTCAAAAATCAGTGCAAAACCAGTGTTGTCCATGAGGTCATaGGAGCTCCACTTGGTGATG +
Preference number: 5 (lower is better)
Translates to: AIGGGNGSPLSKISAKPVLSMRS*ELHLVM
Trigger: CATCACCAAGTGGAGCTCCAATGACCTCATGGACAA...CACTGGTTTTGCACTGATTTTTGAGAGCGGAGACCCATTACCACCTCCTATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAACGGTGTCGAACACGTaGGCGATGGTGTTAGCATCG +
Preference number: 5 (lower is better)
Translates to: LPLLVSERLVLPQEENVPTVSNT*AMVLAS
Trigger: CGATGCTAACACCATCGCCAACGTGTTCGACACCGT...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTACACGCCCACTGTTGTaGGTCACCAGCGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: VFLKDAALPLLVSERLVLTRPLL*VTSVSR
Trigger: CCTGGATACGCTGGTGACCAACAACAGTGGGCGTGT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTAGGGGACTATTGCTGTaGTCCTTGGCATGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: VFLKDAALPLLVSERLVLRGLLL*SLAWLA
Trigger: CGCCAGCCATGCCAAGGACAACAGCAATAGTCCCCT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTAGCCCCAGGGGACTATaGCTGTTGTCCTTGGCATGG +
Preference number: 5 (lower is better)
Translates to: VFLKDAALPLLVSERLVLSPRGL*LLSLAW
Trigger: CCATGCCAAGGACAACAGCAATAGTCCCCTGGGGCT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 90 bp CTGTATCATGTACAGCTGGGCGATGCGGTACTCCTCCACGGTCATTaGCAGAGGAATCCGATATTCCTTTATAATCATCTTGGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: LYHVQLGDAVLLHGH*QRNPIFLYNHLGVQ
Trigger: TTGGACTCCAAGATGATTATAAAGGAATATCGGATTCCTCTGCCAATGACCGTGGAGGAGTACCGCATCGCCCAGCTGTACATGATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000535289.1
ENST00000542210.1
ENST00000546049.5
CDS-3UTR CAA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAACTCCTCCACGGTCATaGGCAGAGGAATCCGATATT +
Preference number: 5 (lower is better)
Translates to: LKDAALPLLVSERLVLPQTPPRS*AEESDI
Trigger: AATATCGGATTCCTCTGCCAATGACCGTGGAGGAGT...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp TTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAAGGACAGCATGGTCCTaGTTCAGGCGAGAAATGAAG +
Preference number: 5 (lower is better)
Translates to: LKDAALPLLVSERLVLPQRTAWS*FRREMK
Trigger: CTTCATTTCTCGCCTGAACAAGGACCATGCTGTCCT...TTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS TCA 90 bp ACCAAGGACCCTAAATACGTGTGGAATGAATCGCTGCTGATCCACTaGGGGGTCAATCGTGCTGCTGAAATGAAGAGTCAAGCTATTCAA +
Preference number: 5 (lower is better)
Translates to: TKDPKYVWNESLLIH*GVNRAAEMKSQAIQ
Trigger: TTGAATAGCTTGACTCTTCATTTCAGCAGCACGATTGACCCCTCAGTGGATCAGCAGCGATTCATTCCACACGTATTTAGGGTCCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451868.2
CDS-3UTR CAA 90 bp TTCAGGCGAGAAATGAAGTCATGGCTGCCTGCCCTGAAGCTGACAAAGCAAGTTTGTATAGACCCACTTTaGCAGAACATTTACACGACC +
Preference number: 5 (lower is better)
Translates to: FRREMKSWLPALKLTKQVCIDPL*QNIYTT
Trigger: GGTCGTGTAAATGTTCTGCAAAAGTGGGTCTATACA...AACTTGCTTTGTCAGCTTCAGGGCAGGCAGCCATGACTTCATTTCTCGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp GTATTTTTAAAGGACGCTGCCCTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTATGGGGAACTGCAAGTaGGGACTTCTAGGCAAGGTT +
Preference number: 5 (lower is better)
Translates to: VFLKDAALPLLVSERLVLMGNCK*GLLGKV
Trigger: AACCTTGCCTAGAAGTCCCAACTTGCAGTTCCCCAT...AAGTACCAGTCTTTCTGAAACTAAGAGAGGGAGGGCAGCGTCCTTTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CTCCCTCTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCATCCTTTATAATCATCTaGGAGTCCAAGCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: LPLLVSERLVLPQEENVPSFIII*ESKPSR
Trigger: ACGGGAAGGCTTGGACTCCAAGATGATTATAAAGGA...TGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAGAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS-3UTR CAA 90 bp CTCTTAGTTTCAGAAAGACTGGTACTTCCTCAAGAGGAGAATGTGCCAAAAGGACACTTGGTGATGTCCTaGGGGAACATTTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLVSERLVLPQEENVPKGHLVMS*GNISSV
Trigger: CACAGAGGAAATGTTCCCCAAGGACATCACCAAGTG...TCCTTTTGGCACATTCTCCTCTTGAGGAAGTACCAGTCTTTCTGAAACTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 72 bp CGCTGCACTCACGGTGCCCTACTTGGGGCCCGCGGCTaGCCCCGGCTCCAGGCGGCCAGTCATGGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: RCTHGALLGARG*PRLQAASHGAA
Trigger: GGCCGCGCCATGACTGGCCGCCTGGAGCCGGGGGCAGCCGCGGGCCCCAAGTAGGGCACCGTGAGTGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp TGGCGCGGCCCCAGCAGCCGGCCGCCACACTCATGCTaGGCTGGCCCCGCTGCTCGCCATCCGCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: WRGPSSRPPHSC*AGPAARHPPGS
Trigger: AGAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCGGCTGCTGGGGCCGCGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp TCATGGCGCGGCCCCAGCAGCCGGCCGCCACACTCATaGTGCGCTGGCCCCGCTGCTCGCCATCCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SWRGPSSRPPHS*CAGPAARHPPG
Trigger: GCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCGGCTGCTGGGGCCGCGCCATGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp CAGCCGGCCGCCACACTCATGCTGCGCTGGCCCCGCTaGTCGCCATCCGCCTGGCTCTGTGTCCGCTCGTGC +
Preference number: 6 (lower is better)
Translates to: QPAATLMLRWPR*SPSAWLCVRSC
Trigger: GCACGAGCGGACACAGAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp GGCCCGCTGGGCTGGGCCGAGATGGTGCGAAGCAGGTaGTTCCGGGAGCGCAGAAAGTCGCCCTGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: GPLGWAEMVRSR*FRERRKSPWPG
Trigger: GCCCGGCCAGGGCGACTTTCTGCGCTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp TCGCCATCCGCCTGGCTCTGTGTCCGCTCGTGCCGGTaGCTGGGCCCGCTGGGCTGGGCCGAGATGGTGCGA +
Preference number: 6 (lower is better)
Translates to: SPSAWLCVRSCR*LGPLGWAEMVR
Trigger: TCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACACAGAGCCAGGCGGATGGCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp AGCTGCCCTTGCGCAGCGCCATGCGGGTGGCCGTGTTaGGAGCGGGCCGCGCCCGGTGGCTGTACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SCPCAAPCGWPC*ERAAPGGCTSA
Trigger: AGCTGAAGTACAGCCACCGGGCGCGGCCCGCTCGCAACACGGCCACCCGCATGGCGCTGCGCAAGGGCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp TGGCCACCCTGGCCTAGCACCATGGAGACCCCGCGCTaGACTCACGGTGCCCTACTTGGGGCCCGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: WPPWPSTMETPR*THGALLGARGC
Trigger: GCAGCCGCGGGCCCCAAGTAGGGCACCGTGAGTGCAGCGCGGGGTCTCCATGGTGCTAGGCCAGGGTGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp TGTGTCCGCTCGTGCCGGTGGCTGGGCCCGCTGGGCTaGGCCGAGATGGTGCGAAGCAGGTGGTTCCGGGAG +
Preference number: 6 (lower is better)
Translates to: CVRSCRWLGPLG*AEMVRSRWFRE
Trigger: CTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp GGCTCTGTGTCCGCTCGTGCCGGTGGCTGGGCCCGCTaGGCTGGGCCGAGATGGTGCGAAGCAGGTGGTTCC +
Preference number: 6 (lower is better)
Translates to: GSVSARAGGWAR*AGPRWCEAGGS
Trigger: GGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCGGCACGAGCGGACACAGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CAA 72 bp AAGCTGCCCTTGCGCAGCGCCATGCGGGTGGCCGTGTaGCGAGCGGGCCGCGCCCGGTGGCTGTACTTCAGC +
Preference number: 6 (lower is better)
Translates to: KLPLRSAMRVAV*RAGRARWLYFS
Trigger: GCTGAAGTACAGCCACCGGGCGCGGCCCGCTCGCAACACGGCCACCCGCATGGCGCTGCGCAAGGGCAGCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CAA 90 bp GCAGTGCCCGGCGAGGAGGGGGCGCCATGCTCTTGGAAGGCTGCATaGTGGGTCTGGAGCACATCCGACTCGGCACAGCCCGGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: AVPGEEGAPCSWKAA*WVWSTSDSAQPGRG
Trigger: GCCCCGCCCGGGCTGTGCCGAGTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 72 bp CCTCCTGGCGGGGCTGGCCACCCTGGCCTAGCACCATaGAGACCCCGCGCTGCACTCACGGTGCCCTACTTG +
Preference number: 6 (lower is better)
Translates to: PPGGAGHPGLAP*RPRAALTVPYL
Trigger: CAAGTAGGGCACCGTGAGTGCAGCGCGGGGTCTCCATGGTGCTAGGCCAGGGTGGCCAGCCCCGCCAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CAA 72 bp CAGCAGCGTGGAGCAGCCATCCCCCAGCGGGTAGCGTaGGTAGCGGGGGACGCTGAAAGGCGGCAGGGCGTG +
Preference number: 6 (lower is better)
Translates to: QQRGAAIPQRVA*VAGDAERRQGV
Trigger: CACGCCCTGCCGCCTTTCAGCGTCCCCCGCTACCAACGCTACCCGCTGGGGGATGGCTGCTCCACGCTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CAA 90 bp GGTCTCGACCAGCAGCGTGGAGCAGCCATCCCCCAGCGGGTAGCGTaGGTAGCGGGGGACGCTGAAAGGCGGCAGGGCGTGAAAGCGCCG +
Preference number: 6 (lower is better)
Translates to: GLDQQRGAAIPQRVA*VAGDAERRQGVKAP
Trigger: CGGCGCTTTCACGCCCTGCCGCCTTTCAGCGTCCCCCGCTACCAACGCTACCCGCTGGGGGATGGCTGCTCCACGCTGCTGGTCGAGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CAA 90 bp CACATCCGCCAGCAGCGTGGAGCAGCCATCCCCCAGCGGGTAGCGTaGGTAGCGGGGGACGCTGAAAGGCGGCAGGGCGTGAAAGCGCCG +
Preference number: 6 (lower is better)
Translates to: HIRQQRGAAIPQRVA*VAGDAERRQGVKAP
Trigger: CGGCGCTTTCACGCCCTGCCGCCTTTCAGCGTCCCCCGCTACCAACGCTACCCGCTGGGGGATGGCTGCTCCACGCTGCTGGCGGATGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS CAA 90 bp GGTCTGGAGCACATCCGACTCGGCACAGCCCGGGCGGGGCCCGTCTaGCCAGGTGGGCGCGGGAACAGGCATACTGGTTTCCAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: GLEHIRLGTARAGPV*PGGRGNRHTGFQEA
Trigger: GGCTTCCTGGAAACCAGTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGCCCCGCCCGGGCTGTGCCGAGTCGGATGTGCTCCAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 72 bp ACATCCGACTCGGCACAGCCCGGGCGGGGCCCGTCTTaGCAGGTGGGCGCGGGAACAGGCATACTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: TSDSAQPGRGPS*QVGAGTGILVS
Trigger: GGAAACCAGTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGCCCCGCCCGGGCTGTGCCGAGTCGGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 72 bp GCCCGTCTTGCCAGGTGGGCGCGGGAACAGGCATACTaGTTTCCAGGAAGCCGTCCCCGTGGGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: ARLARWAREQAY*FPGSRPRGGEG
Trigger: CCCCTCTCCCCCACGGGGACGGCTTCCTGGAAACCAGTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 72 bp ACTCGGCACAGCCCGGGCGGGGCCCGTCTTGCCAGGTaGGCGCGGGAACAGGCATACTGGTTTCCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: TRHSPGGARLAR*AREQAYWFPGS
Trigger: GCTTCCTGGAAACCAGTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGCCCCGCCCGGGCTGTGCCGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 72 bp GGGGCGCCATGCTCTTGGAAGGCTGCATTGTGGGTCTaGAGCACATCCGACTCGGCACAGCCCGGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: GAPCSWKAALWV*STSDSAQPGRG
Trigger: GCCCCGCCCGGGCTGTGCCGAGTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CCA 72 bp GGGGCAGTGCCCGGCGAGGAGGGGGCGCCATGCTCTTaGAAGGCTGCATTGTGGGTCTGGAGCACATCCGCC +
Preference number: 6 (lower is better)
Translates to: GAVPGEEGAPCS*KAALWVWSTSA
Trigger: GGCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS CCA 72 bp AGGGCGAGCAGGGACAGACGCCTGACGCTGGGGGTATaGCTGAGCGCATCGGGGGCCTTCTGGGCGATGCTG +
Preference number: 6 (lower is better)
Translates to: RASRDRRLTLGV*LSASGAFWAML
Trigger: CAGCATCGCCCAGAAGGCCCCCGATGCGCTCAGCCATACCCCCAGCGTCAGGCGTCTGTCCCTGCTCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS CAA 72 bp CACATCCGACTCGGCACAGCCCGGGCGGGGCCCGTCTaGCCAGGTGGGCGCGGGAACAGGCATACTGGTTTC +
Preference number: 6 (lower is better)
Translates to: HIRLGTARAGPV*PGGRGNRHTGF
Trigger: GAAACCAGTATGCCTGTTCCCGCGCCCACCTGGCAAGACGGGCCCCGCCCGGGCTGTGCCGAGTCGGATGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS CAA 90 bp GCAGTGCCCGGCGAGGAGGGGGCGCCATGCTCTTGGAAGGCTGCATaGTGGGTCTGGAGCACATCCGCCAGCAGCGTGGAGCAGCCATCC +
Preference number: 6 (lower is better)
Translates to: AVPGEEGAPCSWKAA*WVWSTSASSVEQPS
Trigger: GGATGGCTGCTCCACGCTGCTGGCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS TCA 72 bp CATCCCCCAGCGGGTAGCGTTGGTAGCGGGGGACGCTaGAAGGCGGCAGGGCGTGAAAGCGCCGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: HPPAGSVGSGGR*KAAGRESAVPA
Trigger: TGCTGGAACGGCGCTTTCACGCCCTGCCGCCTTTCAGCGTCCCCCGCTACCAACGCTACCCGCTGGGGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp GGGGCAGTGCCCGGCGAGGAGGGGGCGCCATGCTCTTaGAAGGCTGCATTGTGGGTCTGGAGCACATCCGAC +
Preference number: 6 (lower is better)
Translates to: GAVPGEEGAPCS*KAALWVWSTSD
Trigger: GTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGCACTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 72 bp GGTCCTCAGTGCCGTTGCTGCGGGGGATGTCGACGTTaGTTCGGCTCAGGTGCCGACTGCTCTCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: GPQCRCCGGCRR*FGSGADCSPGW
Trigger: CCAGCCTGGAGAGCAGTCGGCACCTGAGCCGAAGCAACGTCGACATCCCCCGCAGCAACGGCACTGAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp GCCCGGCGAGGAGGGGGCGCCATGCTCTTGGAAGGCTaGATTGTGGGTCTGGAGCACATCCGACTCGGCACA +
Preference number: 6 (lower is better)
Translates to: ARRGGGAMLLEG*IVGLEHIRLGT
Trigger: TGTGCCGAGTCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTCGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280562.9
CDS GCA 72 bp GCCGGTGAGCCCGCACCATCACCCTCCGTAGTCCTGTaGCCCATGGGGATCAGAGAGGGAGAGACGAGGGGA +
Preference number: 6 (lower is better)
Translates to: AGEPAPSPSVVL*PMGIREGETRG
Trigger: TCCCCTCGTCTCTCCCTCTCTGATCCCCATGGGGCACAGGACTACGGAGGGTGATGGTGCGGGCTCACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436074.6
CDS CAA 72 bp GTGCCTCCGTGCAGCACCAGTAGCAGCACGTGGATCTaGGAGGGCGGTGCAGCCAGCGGCTGGCTAACCTCG +
Preference number: 6 (lower is better)
Translates to: VPPCSTSSSTWI*EGGAASGWLTS
Trigger: CGAGGTTAGCCAGCCGCTGGCTGCACCGCCCTCCAAGATCCACGTGCTGCTACTGGTGCTGCACGGAGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
CDS CAA 72 bp GGGTCCTCAGTGCCGTTGCTGCGGGGGATGTCGACGTaGCTTCGGCTCAGGTGCCGACTGCTCTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GSSVPLLRGMST*LRLRCRLLSRL
Trigger: CAGCCTGGAGAGCAGTCGGCACCTGAGCCGAAGCAACGTCGACATCCCCCGCAGCAACGGCACTGAGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CAA 90 bp GGCTCCGGGGGCTCCCCAGAGGTCTGGTCCGAGACGGCTTCGTGCTaGACGAGCTCAGTGGCCTCCTCACCATCCTCATTGAACTGGGCC +
Preference number: 6 (lower is better)
Translates to: GSGGSPEVWSETASC*TSSVASSPSSLNWA
Trigger: GGCCCAGTTCAATGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCTCGGACCAGACCTCTGGGGAGCCCCCGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS GCA 72 bp GGGGGCTCCCCAGAGGTCTGGTCCGAGACGGCTTCGTaGTTGACGAGCTCAGTGGCCTCCTCACCATCCTCA +
Preference number: 6 (lower is better)
Translates to: GGSPEVWSETAS*LTSSVASSPSS
Trigger: TGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCTCGGACCAGACCTCTGGGGAGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS GCA 72 bp GGGGGATGTCGACGTTGCTTCGGCTCAGGTGCCGACTaGTCTCCAGGCTGGAGCCACCACTACTGCCACCAC +
Preference number: 6 (lower is better)
Translates to: GGCRRCFGSGAD*SPGWSHHYCHH
Trigger: GTGGTGGCAGTAGTGGTGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCCGAAGCAACGTCGACATCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp GAGCCATCGGCGGCCCAGGCTCCCACCTCTCCAAGCTaGTCTCACGCCCCCTGCGGCTCCTTTCAAGTTAAG +
Preference number: 6 (lower is better)
Translates to: EPSAAQAPTSPS*SHAPCGSFQVK
Trigger: CTTAACTTGAAAGGAGCCGCAGGGGGCGTGAGAGCAGCTTGGAGAGGTGGGAGCCTGGGCCGCCGATGGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541244.1
CDS CCA 72 bp AGGATGGTGCCTCCGTGCAGCACCAGTAGCAGCACGTaGATCTTGGAGGGCGGTGCAGCCAGCGGCTGGCTA +
Preference number: 6 (lower is better)
Translates to: RMVPPCSTSSST*ILEGGAASGWL
Trigger: TAGCCAGCCGCTGGCTGCACCGCCCTCCAAGATCCACGTGCTGCTACTGGTGCTGCACGGAGGCACCATCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
CDS CCA 72 bp CCAGGGCACCTGTGCCATCCAGCATGGTGGAGCTGCTaGAATGGCGTGAGCAGGGCTCAGTCCTCAGCACGC +
Preference number: 6 (lower is better)
Translates to: PGHLCHPAWWSC*NGVSRAQSSAR
Trigger: GCGTGCTGAGGACTGAGCCCTGCTCACGCCATTCCAGCAGCTCCACCATGCTGGATGGCACAGGTGCCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp GGGGCGCCATGCTCTTGGAAGGCTGCATTGTGGGTCTaGAGCACATCCGCCAGCAGCGTGGAGCAGCCATCC +
Preference number: 6 (lower is better)
Translates to: GAPCSWKAALWV*STSASSVEQPS
Trigger: GGATGGCTGCTCCACGCTGCTGGCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS CCA 72 bp GAGGAGGGGGCGCCATGCTCTTGGAAGGCTGCATTGTaGGTCTGGAGCACATCCGCCAGCAGCGTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: EEGAPCSWKAAL*VWSTSASSVEQ
Trigger: CTGCTCCACGCTGCTGGCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGCCCCCTCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS CAA 90 bp CTGTGGCGGGAAGGACTCGCTCCCCGCTTGGACGACCGAGACGACTaGGAGGATGTGGACCACTGTTTCTTGAGGCCGCGCCCCACTAGG +
Preference number: 6 (lower is better)
Translates to: LWREGLAPRLDDRDD*EDVDHCFLRPRPTR
Trigger: CCTAGTGGGGCGCGGCCTCAAGAAACAGTGGTCCACATCCTCCAAGTCGTCTCGGTCGTCCAAGCGGGGAGCGAGTCCTTCCCGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
CDS TCA 72 bp AGCTCTCAGCCATGCCTGACACCTGGCTGGCGATGCTaGTCTCACTGGCTCGGCGGAAGCCACGACTGGCAG +
Preference number: 6 (lower is better)
Translates to: SSQPCLTPGWRC*SHWLGGSHDWQ
Trigger: CTGCCAGTCGTGGCTTCCGCCGAGCCAGTGAGATCAGCATCGCCAGCCAGGTGTCAGGCATGGCTGAGAGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS TCA 72 bp GTTGTAGGCGGCGGGACACAGTGCCGGAAAGCAATCTaGTGCCGTGCGCCCATGGTGTGCTCTGTGCGCCTG +
Preference number: 6 (lower is better)
Translates to: VVGGGTQCRKAI*CRAPMVCSVRL
Trigger: CAGGCGCACAGAGCACACCATGGGCGCACGGCATCAGATTGCTTTCCGGCACTGTGTCCCGCCGCCTACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535289.1
CDS TCA 72 bp GGCGGGAAGGACTCGCTGGAAGGCAAAACCCCAGATTaGCCGCCAACTGGAGAGGAAGGGCCCAGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GGKDSLEGKTPD*PPTGEEGPRGC
Trigger: GCAGCCTCTGGGCCCTTCCTCTCCAGTTGGCGGTCAATCTGGGGTTTTGCCTTCCAGCGAGTCCTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS GCA 72 bp TTGCTGCGGGGGATGTCGACGTTGCTTCGGCTCAGGTaGCGACTGCTCTCCAGGCTGGAGCCACCACTACTG +
Preference number: 6 (lower is better)
Translates to: LLRGMSTLLRLR*RLLSRLEPPLL
Trigger: CAGTAGTGGTGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCCGAAGCAACGTCGACATCCCCCGCAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS GCA 72 bp AGGCCACAACTCCACCTAACCCACATGTGGTGTCTGTaGGCTGGCGCGACCCACCCTCACCCCATGACCCAC +
Preference number: 6 (lower is better)
Translates to: RPQLHLTHMWCL*AGATHPHPMTH
Trigger: GTGGGTCATGGGGTGAGGGTGGGTCGCGCCAGCGCACAGACACCACATGTGGGTTAGGTGGAGTTGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535289.1
CDS CAA 90 bp TCCAGGATGGTGCCTCCGTGCAGCACCAGTAGCAGCACGTGGATCTaGGAGGGCGGTGCAGCCAGCGGCTGGCTAACCTCGTCCTCTATG +
Preference number: 6 (lower is better)
Translates to: SRMVPPCSTSSSTWI*EGGAASGWLTSSSM
Trigger: CATAGAGGACGAGGTTAGCCAGCCGCTGGCTGCACCGCCCTCCAAGATCCACGTGCTGCTACTGGTGCTGCACGGAGGCACCATCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
CDS CAA 90 bp CTGACAGGCATCACAGAGGCTCCCCGCTTGGACGACCGAGACGACTaGGAGGATGTGGACCACTGTTTCTTGAGGCCGCGCCCCACTAGG +
Preference number: 6 (lower is better)
Translates to: LTGITEAPRLDDRDD*EDVDHCFLRPRPTR
Trigger: CCTAGTGGGGCGCGGCCTCAAGAAACAGTGGTCCACATCCTCCAAGTCGTCTCGGTCGTCCAAGCGGGGAGCCTCTGTGATGCCTGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS TCA 72 bp GGCGATGCTGGATGCCGTGTAGCTCTCAGCCATGCCTaGCACCTGGCTGGCGATGCTGATCTCACTGGCTCG +
Preference number: 6 (lower is better)
Translates to: GDAGCRVALSHA*HLAGDADLTGS
Trigger: CGAGCCAGTGAGATCAGCATCGCCAGCCAGGTGTCAGGCATGGCTGAGAGCTACACGGCATCCAGCATCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp CATTCCAAGACTCCTCCACCACCCGCAGGGCTGCCTTaGGCAGGATGGAGCGGAACCAGCTGGGAATGTGCA +
Preference number: 6 (lower is better)
Translates to: HSKTPPPPAGLP*AGWSGTSWECA
Trigger: TGCACATTCCCAGCTGGTTCCGCTCCATCCTGCCCAAGGCAGCCCTGCGGGTGGTGGAGGAGTCTTGGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000546049.5
CDS CCA 72 bp GGGCCGTCCTCATTGGCAAGGGCATCATTGATCCGGTaGTTGGCCGTCACGTTCCGCAGCTTCACGTGGGTC +
Preference number: 6 (lower is better)
Translates to: GPSSLARASLIR*LAVTFRSFTWV
Trigger: GACCCACGTGAAGCTGCGGAACGTGACGGCCAACCACCGGATCAATGATGCCCTTGCCAATGAGGACGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp GGTAGACACCCACGCCCAGGCGGTGCGACTCAGGGATaGTGTAGGAGACACGCCCACTGTTGTTGGTCACCA +
Preference number: 6 (lower is better)
Translates to: GRHPRPGGATQG*CRRHAHCCWSP
Trigger: TGGTGACCAACAACAGTGGGCGTGTCTCCTACACCATCCCTGAGTCGCACCGCCTGGGCGTGGGTGTCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CAA 72 bp GGCTCCCCAGAGGTCTGGTCCGAGACGGCTTCGTGCTaGACGAGCTCAGTGGCCTCCTCACCATCCTCATTG +
Preference number: 6 (lower is better)
Translates to: GSPEVWSETASC*TSSVASSPSSL
Trigger: CAATGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCTCGGACCAGACCTCTGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS CAA 72 bp CCGTCCTCATTGGCAAGGGCATCATTGATCCGGTGGTaGGCCGTCACGTTCCGCAGCTTCACGTGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: PSSLARASLIRW*AVTFRSFTWVR
Trigger: GCGGACCCACGTGAAGCTGCGGAACGTGACGGCCAACCACCGGATCAATGATGCCCTTGCCAATGAGGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CAA 90 bp TCAGCGCAGGAGCCTGCACGGAAGTGTGGGGCCCAGGCAGGGGCTTaGGGAGGCTGTACCCATGTTGCAGGTCAAACTAAAGTCACTGCC +
Preference number: 6 (lower is better)
Translates to: SAQEPARKCGAQAGA*GGCTHVAGQTKVTA
Trigger: GGCAGTGACTTTAGTTTGACCTGCAACATGGGTACAGCCTCCCAAAGCCCCTGCCTGGGCCCCACACTTCCGTGCAGGCTCCTGCGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436074.6
CDS GCA 72 bp AGTCCCTGGCAATACTCTGCATCCTCCACTCTGAGATaGTGTGGCGGGAAGGACTCGCTCCCCGCTTGGACG +
Preference number: 6 (lower is better)
Translates to: SPWQYSASSTLR*CGGKDSLPAWT
Trigger: CGTCCAAGCGGGGAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
CDS GCA 72 bp GCTGGTTACTGTAGCACAGGGCATCAAATGCCAGGATaGCCCCGACGCAGTCCCCAATCAGGCAGACCTGCC +
Preference number: 6 (lower is better)
Translates to: AGYCSTGHQMPG*PRRSPQSGRPA
Trigger: GGCAGGTCTGCCTGATTGGGGACTGCGTCGGGGGCATCCTGGCATTTGATGCCCTGTGCTACAGTAACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp CTGGCAATACTCTGCATCCTCCACTCTGAGATGCTGTaGCGGGAAGGACTCGCTCCCCGCTTGGACGACCGA +
Preference number: 6 (lower is better)
Translates to: LAILCILHSEML*REGLAPRLDDR
Trigger: TCGGTCGTCCAAGCGGGGAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
CDS CCA 72 bp TCCACACTGGAGGCCACCCTGAACTCAGGGGCACCCTaGCGGTACAGACCATCTTGTGTGTCTTCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: STLEATLNSGAP*RYRPSCVSSGS
Trigger: AGAGCCGGAAGACACACAAGATGGTCTGTACCGCCAGGGTGCCCCTGAGTTCAGGGTGGCCTCCAGTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS CCA 72 bp AGCACGTGGATCTTGGAGGGCGGTGCAGCCAGCGGCTaGCTAACCTCGTCCTCTATGATGTTCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: STWILEGGAASG*LTSSSMMFSCS
Trigger: GGAGCAGCTGAACATCATAGAGGACGAGGTTAGCCAGCCGCTGGCTGCACCGCCCTCCAAGATCCACGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
CDS TCA 72 bp ATCCGAGTCCCTGGCAATACTCTGCATCCTCCACTCTaGGATGCTGTGGCGGGAAGGACTCGCTCCCCGCTT +
Preference number: 6 (lower is better)
Translates to: IRVPGNTLHPPL*DAVAGRTRSPL
Trigger: AAGCGGGGAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGACTCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
CDS TCA 72 bp CTGGTGCTGCTGGATGGTATCCAGCTCGTAGGTGGATaGGTCGCTCCTCTTGCGGGGCAGTTGCCTTTTGGG +
Preference number: 6 (lower is better)
Translates to: LVLLDGIQLVGG*VAPLAGQLPFG
Trigger: CCCAAAAGGCAACTGCCCCGCAAGAGGAGCGACTCATCCACCTACGAGCTGGATACCATCCAGCAGCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS TCA 72 bp GTTGGTCACCAGCGTATCCAGGTAGAGCCACTCGCCTaGGGGCGGCTGGGTCATGATGTGCACATCCACCTT +
Preference number: 6 (lower is better)
Translates to: VGHQRIQVEPLA*GRLGHDVHIHL
Trigger: AAGGTGGATGTGCACATCATGACCCAGCCGCCCTCAGGCGAGTGGCTCTACCTGGATACGCTGGTGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS TCA 72 bp GAGGAGAAATGGGTCCCTAGGCTCACAGAAGGTTGTTaGGGACCAGGACACACGTGCCAGCATCCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: EEKWVPRLTEGC*GPGHTCQHPRS
Trigger: CGAGCGGGGATGCTGGCACGTGTGTCCTGGTCCTCAACAACCTTCTGTGAGCCTAGGGACCCATTTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320201.10
CDS GCA 72 bp AGACACCGGCTGGTTACTGTAGCACAGGGCATCAAATaGCAGGATGCCCCCGACGCAGTCCCCAATCAGGCA +
Preference number: 6 (lower is better)
Translates to: RHRLVTVAQGIK*QDAPDAVPNQA
Trigger: TGCCTGATTGGGGACTGCGTCGGGGGCATCCTGGCATTTGATGCCCTGTGCTACAGTAACCAGCCGGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp ACCCTTGCCCCACGACCCACCTGTATCATGTACAGCTaGGCGATGCGGTACTCCTCCACGGTCATTGGCAGA +
Preference number: 6 (lower is better)
Translates to: TLAPRPTCIMYS*AMRYSSTVIGR
Trigger: TCTGCCAATGACCGTGGAGGAGTACCGCATCGCCCAGCTGTACATGATACAGGTGGGTCGTGGGGCAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535289.1
CDS CAA 72 bp GGGCCCAGGCAGGGGCTTTGGGAGGCTGTACCCATGTaGCAGGTCAAACTAAAGTCACTGCCTGTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: GPRQGLWEAVPM*QVKLKSLPVCA
Trigger: GGCACAGACAGGCAGTGACTTTAGTTTGACCTGCAACATGGGTACAGCCTCCCAAAGCCCCTGCCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436074.6
CDS CAA 90 bp GAGAGCTGGTTGTGGACAAAGACAGATGTTCCAGTGAGGTCTCCTTaGAAGAATCCCGACTCTGGGTGGGGGAGGCAGGTAGGCCGGGGT +
Preference number: 6 (lower is better)
Translates to: ESWLWTKTDVPVRSP*KNPDSGWGRQVGRG
Trigger: ACCCCGGCCTACCTGCCTCCCCCACCCAGAGTCGGGATTCTTCAAAGGAGACCTCACTGGAACATCTGTCTTTGTCCACAACCAGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542210.1
CDS TCA 72 bp ATCCGAGTCCCTGGCAATACTCTGCATCCTCCACTCTaGGATGCTGTGGCGGGAAGGACTCGCTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: IRVPGNTLHPPL*DAVAGRTRWKA
Trigger: TGCCTTCCAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGACTCGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS CCA 72 bp ACTCAGGGATGGTGTAGGAGACACGCCCACTGTTGTTaGTCACCAGCGTATCCAGGTAGAGCCACTCGCCTG +
Preference number: 6 (lower is better)
Translates to: TQGWCRRHAHCC*SPAYPGRATRL
Trigger: CAGGCGAGTGGCTCTACCTGGATACGCTGGTGACCAACAACAGTGGGCGTGTCTCCTACACCATCCCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS CCA 72 bp ATTTTCCTGGAACGAGCTTTCCACACTTTCACAGGCTaGAGCCATCGGCGGCCCAGGCTCCCACCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: IFLERAFHTFTG*SHRRPRLPPLQ
Trigger: TTGGAGAGGTGGGAGCCTGGGCCGCCGATGGCTCCAGCCTGTGAAAGTGTGGAAAGCTCGTTCCAGGAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541244.1
CDS CCA 72 bp CTCTGGTCACTCCCAGGTGGAGGCCGGGGAGAGAGCTaGTTGTGGACAAAGACAGATGTTCCAGTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: LWSLPGGGRGES*LWTKTDVPVRS
Trigger: AGACCTCACTGGAACATCTGTCTTTGTCCACAACCAGCTCTCTCCCCGGCCTCCACCTGGGAGTGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542210.1
CDS CAA 90 bp ACGGCTTCGTGCTTGACGAGCTCAGTGGCCTCCTCACCATCCTCATaGAACTGGGCCATCTTACGGGAAAGCATGAGCTGTGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TASCLTSSVASSPSS*NWAILRESMSCASF
Trigger: GAAGGAGGCACAGCTCATGCTTTCCCGTAAGATGGCCCAGTTCAATGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS TCA 72 bp GAGGAGAAATGGGTCCCTAGGCTCACAGAAGGTTGTTaGGGACCAGGACACACGTGCCAGCATCTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: EEKWVPRLTEGC*GPGHTCQHLPS
Trigger: GGAAGGCAGATGCTGGCACGTGTGTCCTGGTCCTCAACAACCTTCTGTGAGCCTAGGGACCCATTTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542210.1
CDS GCA 72 bp AGTCCCTGGCAATACTCTGCATCCTCCACTCTGAGATaGTGTGGCGGGAAGGACTCGCTGGAAGGCAAAACC +
Preference number: 6 (lower is better)
Translates to: SPWQYSASSTLR*CGGKDSLEGKT
Trigger: GGTTTTGCCTTCCAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS CCA 72 bp AACTGGGGAGTGGGCACCATAGACTCCATAATGACGTaGGTCTGGAACTGCAGGCCTCTCCTCTGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: NWGVGTIDSIMT*VWNCRPLLCPV
Trigger: AACAGGGCAGAGGAGAGGCCTGCAGTTCCAGACCCACGTCATTATGGAGTCTATGGTGCCCACTCCCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS CCA 72 bp CTGGCAATACTCTGCATCCTCCACTCTGAGATGCTGTaGCGGGAAGGACTCGCTGGAAGGCAAAACCCCAGA +
Preference number: 6 (lower is better)
Translates to: LAILCILHSEML*REGLAGRQNPR
Trigger: TCTGGGGTTTTGCCTTCCAGCGAGTCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546049.5
CDS CAA 90 bp TGCCACTTCTCCCTTGGCTTTGAGGGGGTGAACACCGACACTTCCTaGCCATCCAGCTCCAAGATGCTGGAGTTGTCATGCCTCATGACC +
Preference number: 6 (lower is better)
Translates to: CHFSLGFEGVNTDTS*PSSSKMLELSCLMT
Trigger: GGTCATGAGGCATGACAACTCCAGCATCTTGGAGCTGGATGGCAAGGAAGTGTCGGTGTTCACCCCCTCAAAGCCAAGGGAGAAGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280562.9
ENST00000320201.10
CDS TCA 72 bp TCACCAAGGACCCCTGTGGGTCTGAGAAGGCTCCACTaGTGTCCCTGTCAAAGGAGGAGAAATGGGTCCCTA +
Preference number: 6 (lower is better)
Translates to: SPRTPVGLRRLH*CPCQRRRNGSL
Trigger: TAGGGACCCATTTCTCCTCCTTTGACAGGGACATCAGTGGAGCCTTCTCAGACCCACAGGGGTCCTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000535289.1
ENST00000542210.1
CDS GCA 72 bp TCATCTGAGCTCTCATCCGAGTCCCTGGCAATACTCTaGATCCTCCACTCTGAGATGCTGTGGCGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: SSELSSESLAIL*ILHSEMLWREG
Trigger: TCCTTCCCGCCACAGCATCTCAGAGTGGAGGATGCAGAGTATTGCCAGGGACTCGGATGAGAGCTCAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS TCA 72 bp AGCGGAACTCCACCTTGCAGAGCTTGTATGCGCACATaGTGGGGAAGACCTGCTTCTTGTACTCCTCGATCC +
Preference number: 6 (lower is better)
Translates to: SGTPPCRACMRT*WGRPASCTPRS
Trigger: GGATCGAGGAGTACAAGAAGCAGGTCTTCCCCATCATGTGCGCATACAAGCTCTGCAAGGTGGAGTTCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000546049.5
CDS TCA 72 bp GGACAGGTCCTCGTGCGCATCGAAGAACTCATCATCTaGGCTCTCATCCGAGTCCCTGGCAATACTCTGCAT +
Preference number: 6 (lower is better)
Translates to: GQVLVRIEELII*ALIRVPGNTLH
Trigger: ATGCAGAGTATTGCCAGGGACTCGGATGAGAGCTCAGATGATGAGTTCTTCGATGCGCACGAGGACCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS CCA 72 bp GTCTCGTTACGGCTCTTCTTCTGTATCATGTACAGCTaGGCGATGCGGTACTCCTCCACGGTCATTGGCAGA +
Preference number: 6 (lower is better)
Translates to: VSLRLFFCIMYS*AMRYSSTVIGR
Trigger: TCTGCCAATGACCGTGGAGGAGTACCGCATCGCCCAGCTGTACATGATACAGAAGAAGAGCCGTAACGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000542210.1
ENST00000546049.5
CDS CAA 72 bp TGCTTGACGAGCTCAGTGGCCTCCTCACCATCCTCATaGAACTGGGCCATCTTACGGGAAAGCATGAGCTGT +
Preference number: 6 (lower is better)
Translates to: CLTSSVASSPSS*NWAILRESMSC
Trigger: ACAGCTCATGCTTTCCCGTAAGATGGCCCAGTTCAATGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS CAA 72 bp TCCATGAGGTCATTGGAGCTCCACTTGGTGATGTCCTaGGGGAACATTTCCTCTGTGTCGGACAGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SMRSLELHLVMS*GNISSVSDRSS
Trigger: CGAGGACCTGTCCGACACAGAGGAAATGTTCCCCAAGGACATCACCAAGTGGAGCTCCAATGACCTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000436074.6
ENST00000451868.2
ENST00000546049.5
CDS GCA 72 bp TTGCAGAGCTTGTATGCGCACATGATGGGGAAGACCTaGTTCTTGTACTCCTCGATCCAGTTCTCGGACAGG +
Preference number: 6 (lower is better)
Translates to: LQSLYAHMMGKT*FLYSSIQFSDR
Trigger: CCTGTCCGAGAACTGGATCGAGGAGTACAAGAAGCAGGTCTTCCCCATCATGTGCGCATACAAGCTCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000546049.5
CDS CCA 72 bp AGCAGAGATGACGATCAGGTGCTGCCACTTGTGGGCTaGCCTTTAAGGTGTCACATCAGATTTTCCGCTCAC +
Preference number: 6 (lower is better)
Translates to: SRDDDQVLPLVG*PLRCHIRFSAH
Trigger: GTGAGCGGAAAATCTGATGTGACACCTTAAAGGCCAGCCCACAAGTGGCAGCACCTGATCGTCATCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541244.1
CDS CAA 72 bp TTGTGGACAAAGACAGATGTTCCAGTGAGGTCTCCTTaGAAGAATCCCGACTCTGGGTGGGGGAGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: LWTKTDVPVRSP*KNPDSGWGRQV
Trigger: TACCTGCCTCCCCCACCCAGAGTCGGGATTCTTCAAAGGAGACCTCACTGGAACATCTGTCTTTGTCCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542210.1
CDS TCA 72 bp ATCGCTGCTGATCCACTGAGGGGTCAATCGTGCTGCTaGAATGAAGAGTCAAGCTATTCAACCCCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: IAADPLRGQSCC*NEESSYSTPWL
Trigger: AAGCCAGGGGGTTGAATAGCTTGACTCTTCATTTCAGCAGCACGATTGACCCCTCAGTGGATCAGCAGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451868.2
CDS CAA 90 bp TCCACGGTCATTGGCAGAGGAATCCGATATTCCTTTATAATCATCTaGGAGTCCAAGCCTTCCCGTCGATGGGGAACTGCAAGTTGGGAC +
Preference number: 6 (lower is better)
Translates to: STVIGRGIRYSFIII*ESKPSRRWGTASWD
Trigger: GTCCCAACTTGCAGTTCCCCATCGACGGGAAGGCTTGGACTCCAAGATGATTATAAAGGAATATCGGATTCCTCTGCCAATGACCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000535289.1
ENST00000541244.1
ENST00000542210.1
ENST00000546049.5
CDS TCA 72 bp TCACCAAGGACCCCGCCTGAAAGCCAGCCAATGAGGTaGTTATTCCAATTTTCCTGGAACGAGCTTTCCACA +
Preference number: 6 (lower is better)
Translates to: SPRTPPESQPMR*LFQFSWNELST
Trigger: TGTGGAAAGCTCGTTCCAGGAAAATTGGAATAATCACCTCATTGGCTGGCTTTCAGGCGGGGTCCTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541244.1
CDS CCA 72 bp AACAGCTTGGGGTCCTCTTCTGTCTTATACTCGTTGTaGGGCACAGGGTCTTTGACAATGTCGATGAAGTCG +
Preference number: 6 (lower is better)
Translates to: NSLGSSSVLYSL*GTGSLTMSMKS
Trigger: CGACTTCATCGACATTGTCAAAGACCCTGTGCCCCACAACGAGTATAAGACAGAAGAGGACCCCAAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000546049.5
CDS CAA 72 bp TGGAACAGCTTGGGGTCCTCTTCTGTCTTATACTCGTaGTGGGGCACAGGGTCTTTGACAATGTCGATGAAG +
Preference number: 6 (lower is better)
Translates to: WNSLGSSSVLYS*WGTGSLTMSMK
Trigger: CTTCATCGACATTGTCAAAGACCCTGTGCCCCACAACGAGTATAAGACAGAAGAGGACCCCAAGCTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000546049.5
CDS CAA 72 bp GCTGAAATGAAGAGTCAAGCTATTCAACCCCCTGGCTaGAATGGCGCCATCTCAGGAACCCCTCAGAGAATT +
Preference number: 6 (lower is better)
Translates to: AEMKSQAIQPPG*NGAISGTPQRI
Trigger: AATTCTCTGAGGGGTTCCTGAGATGGCGCCATTCAAGCCAGGGGGTTGAATAGCTTGACTCTTCATTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451868.2
CDS CAA 90 bp TTGGTTGACTGGAACAGCTTGGGGTCCTCTTCTGTCTTATACTCGTaGTGGGGCACAGGGTCTTTGACAATGTCGATGAAGTCGATTGTC +
Preference number: 6 (lower is better)
Translates to: LVDWNSLGSSSVLYS*WGTGSLTMSMKSIV
Trigger: GACAATCGACTTCATCGACATTGTCAAAGACCCTGTGCCCCACAACGAGTATAAGACAGAAGAGGACCCCAAGCTGTTCCAGTCAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000546049.5
CDS TCA 72 bp CCTAAATACGTGTGGAATGAATCGCTGCTGATCCACTaGGGGGTCAATCGTGCTGCTGAAATGAAGAGTCAA +
Preference number: 6 (lower is better)
Translates to: PKYVWNESLLIH*GVNRAAEMKSQ
Trigger: TTGACTCTTCATTTCAGCAGCACGATTGACCCCTCAGTGGATCAGCAGCGATTCATTCCACACGTATTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451868.2
CDS CAA 72 bp ATTGGCAGAGGAATCCGATATTCCTTTATAATCATCTaGGAGTCCAAGCCTTCCCGTCGATGGGGAACTGCA +
Preference number: 6 (lower is better)
Translates to: IGRGIRYSFIII*ESKPSRRWGTA
Trigger: TGCAGTTCCCCATCGACGGGAAGGCTTGGACTCCAAGATGATTATAAAGGAATATCGGATTCCTCTGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280562.9
ENST00000320201.10
ENST00000451868.2
ENST00000535289.1
ENST00000541244.1
ENST00000542210.1
ENST00000546049.5