Pregenerated sensors for PISRT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000281473Ensembl transcript IDs: ENST00000626175.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTTCCCCATGTTCTAAGTGGGAAACTGAGTTCCAGAGAGAAGCCGTaGCTCTCCCAAAGTGAGTCAGCTGTGAATAAAGCCATATTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LPHVLSGKLSSREKP*LSQSESAVNKAIFS Trigger: GGAGAATATGGCTTTATTCACAGCTGACTCACTTTGGGAGAGTCACGGCTTCTCTCTGGAACTCAGTTTCCCACTTAGAACATGGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS GCA 90 bp | ATGGCAAACACTGATACTCAAACAACACCACACTCGAAGCATTGCTaGAAAGGCTTTCAAACAATTTGCACAAGGCCTCTATTTGACAGA | + |
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Preference number: 5 (lower is better) Translates to: MANTDTQTTPHSKHC*KGFQTICTRPLFDR Trigger: TCTGTCAAATAGAGGCCTTGTGCAAATTGTTTGAAAGCCTTTGCAGCAATGCTTCGAGTGTGGTGTTGTTTGAGTATCAGTGTTTGCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS TCA 90 bp | AGAAGGGACCAAAGAGAACCTTGTTATAAGAATAATGGCAAACACTaGTACTCAAACAACACCACACTCGAAGCATTGCTGCAAAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RRDQREPCYKNNGKH*YSNNTTLEALLQRL Trigger: AAGCCTTTGCAGCAATGCTTCGAGTGTGGTGTTGTTTGAGTATCAGTGTTTGCCATTATTCTTATAACAAGGTTCTCTTTGGTCCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS GCA 90 bp | ATAATGGCAAACACTGATACTCAAACAACACCACACTCGAAGCATTaGTGCAAAGGCTTTCAAACAATTTGCACAAGGCCTCTATTTGAC | + |
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Preference number: 5 (lower is better) Translates to: IMANTDTQTTPHSKH*CKGFQTICTRPLFD Trigger: GTCAAATAGAGGCCTTGTGCAAATTGTTTGAAAGCCTTTGCAGCAATGCTTCGAGTGTGGTGTTGTTTGAGTATCAGTGTTTGCCATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS CCA 72 bp | TATTTGACAGAGAAGGAAATTCACAGCACGGTGAAGTaGCCCAAGGTAAGGCAGCCAGGATTTAAGCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: YLTEKEIHSTVK*PKVRQPGFKPL Trigger: CAGGGGCTTAAATCCTGGCTGCCTTACCTTGGGCCACTTCACCGTGCTGTGAATTTCCTTCTCTGTCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS CAA 90 bp | AGCATTGCTGCAAAGGCTTTCAAACAATTTGCACAAGGCCTCTATTaGACAGAGAAGGAAATTCACAGCACGGTGAAGTGGCCCAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: SIAAKAFKQFAQGLY*TEKEIHSTVKWPKV Trigger: TACCTTGGGCCACTTCACCGTGCTGTGAATTTCCTTCTCTGTCAAATAGAGGCCTTGTGCAAATTGTTTGAAAGCCTTTGCAGCAATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS TCA 72 bp | GAGAGAAGCCGTGACTCTCCCAAAGTGAGTCAGCTGTaGATAAAGCCATATTCTCCTTCTTTCTTCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: ERSRDSPKVSQL*IKPYSPSFFIL Trigger: CAGAATGAAGAAAGAAGGAGAATATGGCTTTATTCACAGCTGACTCACTTTGGGAGAGTCACGGCTTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS CAA 72 bp | GCAAAGGCTTTCAAACAATTTGCACAAGGCCTCTATTaGACAGAGAAGGAAATTCACAGCACGGTGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: AKAFKQFAQGLY*TEKEIHSTVKW Trigger: CCACTTCACCGTGCTGTGAATTTCCTTCTCTGTCAAATAGAGGCCTTGTGCAAATTGTTTGAAAGCCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS GCA 72 bp | ACTGATACTCAAACAACACCACACTCGAAGCATTGCTaGAAAGGCTTTCAAACAATTTGCACAAGGCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: TDTQTTPHSKHC*KGFQTICTRPL Trigger: TAGAGGCCTTGTGCAAATTGTTTGAAAGCCTTTGCAGCAATGCTTCGAGTGTGGTGTTGTTTGAGTATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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| CDS TCA 72 bp | CAAAGAGAACCTTGTTATAAGAATAATGGCAAACACTaGTACTCAAACAACACCACACTCGAAGCATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QREPCYKNNGKH*YSNNTTLEALL Trigger: CAGCAATGCTTCGAGTGTGGTGTTGTTTGAGTATCAGTGTTTGCCATTATTCTTATAACAAGGTTCTCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626175.1 |
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