Pregenerated sensors for PIR (Homo sapiens)
Ensembl gene IDs: ENSG00000087842Ensembl transcript IDs: ENST00000380420.10, ENST00000380421.3, ENST00000471725.1, ENST00000476381.5, ENST00000492432.5
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAAGCTTTAGAAATGGAATGCCTTCAATGGCTCAATCTCAGAAATaGCAAAATTCTAGGACACATCAAGACCTGCTCTTCCGCTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: ISFRNGMPSMAQSQK*QNSRTHQDLLFRFP Trigger: TGGAAAGCGGAAGAGCAGGTCTTGATGTGTCCTAGAATTTTGCCATTTCTGAGATTGAGCCATTGAAGGCATTCCATTTCTAAAGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGCTTTAGAAATGGAATaGCTTCAATGGCTCAATCTC | + |
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Preference number: 2 (lower is better) Translates to: CYKNHVITLVWNSLEAPAALEME*LQWLNL Trigger: GAGATTGAGCCATTGAAGGCATTCCATTTCTAAAGC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| 3UTR-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGCTTTAGAAATGGAATaGCTTCAATGGCTCAATCTC | + |
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Preference number: 2 (lower is better) Translates to: YKNHVITLVWNSLEAPAKALEME*LQWLNL Trigger: GAGATTGAGCCATTGAAGGCATTCCATTTCTAAAGC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| 3UTR-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGCTCAATCTCAGAAATaGCAAAATTCTAGGACACAT | + |
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Preference number: 2 (lower is better) Translates to: YKNHVITLVWNSLEAPAKAQSQK*QNSRTH Trigger: ATGTGTCCTAGAATTTTGCCATTTCTGAGATTGAGC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR TCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCCAGTAGCCTCACCGTaGCTCAGCGCTTCGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAPVASP*LSASRP Trigger: CGGCCGCGAAGCGCTGAGTCACGGTGAGGCTACTGG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGGGTCTCGGAGGCCCTaGGGCTCCGCCCTCGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKGSRRP*GSALGN Trigger: ATTCCCGAGGGCGGAGCCCCAGGGCCTCCGAGACCC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTTGCGGTAGCGGCACCTaGAGCCTTAGCGGCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPACGSGT*SLSGGG Trigger: ACCCCCGCCGCTAAGGCTCCAGGTGCCGCTACCGCA...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR TCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACCAGTAGCCTCACCGTaGCTCAGCGCTTCGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKPVASP*LSASRP Trigger: CGGCCGCGAAGCGCTGAGTCACGGTGAGGCTACTGG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATGTGGCCCGGGCAGGTaGTCTGATCGGCGCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKCGPGR*SDRRSG Trigger: ACCGGAGCGCCGATCAGAGCACCTGCCCGGGCCACA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGCCCTTTGGCCTCCCTaGCTCTCGTGCCGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAALWPP*LSCREE Trigger: CTCTTCCCGGCACGAGAGGCAGGGAGGCCAAAGGGC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGCCGCCGGGAGCGAGTaGAGGGAGGGCAGGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAAAGSE*REGRLR Trigger: TCTTAACCTGCCCTCCCTGCACTCGCTCCCGGCGGC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCCCAGGTACTCACGCTaGGGTAGCGGCACCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAPRYSR*GSGTWS Trigger: GCTCCAGGTGCCGCTACCGCAGCGTGAGTACCTGGG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAGCTTGGCGGCCCTTTaGCCTCCCTGCCTCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPASLAAL*PPCLSC Trigger: GCACGAGAGGCAGGGAGGCCAAAGGGCCGCCAAGCT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATGCGGTAGCGGCACCTaGAGCCTTAGCGGCGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKCGSGT*SLSGGG Trigger: ACCCCCGCCGCTAAGGCTCCAGGTGCCGCTACCGCA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGCCGCCGGGAGCGAGTaGAGGGAGGGCAGGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKAAGSE*REGRLR Trigger: TCTTAACCTGCCCTCCCTGCACTCGCTCCCGGCGGC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCCAACCCCTTCCGACTaGTCCCGGCTGAGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAPTPSD*SRLSTE Trigger: CTCAGTGCTCAGCCGGGAGCAGTCGGAAGGGGTTGG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTTCTCAGCGTGCAGAATaGCCCGGCCCGCAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPASQRAE*PGPQSS Trigger: GGATGACTGCGGGCCGGGGCATTCTGCACGCTGAGA...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATCTCCCAGGCCAGCTTaGCGGCCCTTTGGCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKSPRPA*RPFGLP Trigger: AGGGAGGCCAAAGGGCCGCCAAGCTGGCCTGGGAGA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCTGAGCTGTAGAGGATaGAGGGGCTGCGGTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPALSCRG*RGCGSG Trigger: GCCGCTACCGCAGCCCCTCCATCCTCTACAGCTCAG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380420.10 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCCTCCCTGCCTCTCGTaGCGGGAAGAGATGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAPPCLS*REEMLT Trigger: AGTGAGCATCTCTTCCCGGCACGAGAGGCAGGGAGG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACCAACCCCTTCCGACTaGTCCCGGCTGAGCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKPTPSD*SRLSTE Trigger: CTCAGTGCTCAGCCGGGAGCAGTCGGAAGGGGTTGG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCTTCATGGGCCATGCTaGCCCCTTCCAGGAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPALHGPC*PLPGGR Trigger: CCTACCTCCTGGAAGGGGGCAGCATGGCCCATGAAG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATCTCAGCGTGCAGAATaGCCCGGCCCGCAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKSQRAE*PGPQSS Trigger: GGATGACTGCGGGCCGGGGCATTCTGCACGCTGAGA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACAAGGCATCTCAGCGTaGAGAATGCCCCGGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKQGISA*RMPRPA Trigger: TGCGGGCCGGGGCATTCTGCACGCTGAGATGCCTTG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR TCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAATGGGCTGGCTCCTCTaGGCAAGGCATCTCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKMGWLL*ARHLSV Trigger: CACGCTGAGATGCCTTGCTCAGAGGAGCCAGCCCAT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAACTCGGGTCTGCCAATaGTTCTCCGGACCCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKTRVCQ*FSGPSL Trigger: GAGCGAGGGTCCGGAGAAGCATTGGCAGACCCGAGT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACTTCATGGGCCATGCTaGCCCCTTCCAGGAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKLHGPC*PLPGGR Trigger: CCTACCTCCTGGAAGGGGGCAGCATGGCCCATGAAG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAGTCTTCATGGGCCATaGTGCCCCCTTCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPASLHGP*CPLPGG Trigger: ACCTCCTGGAAGGGGGCAGCATGGCCCATGAAGACT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCCACAGAAGTCTTCATaGGCCATGCTGCCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAPQKSS*AMLPPS Trigger: GGAAGGGGGCAGCATGGCCCATGAAGACTTCTGTGG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAGGCGGCACTTGCTGTaGTCCAGGAGGAAATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPARRHLL*SRRKCV Trigger: CACACATTTCCTCCTGGAGCACAGCAAGTGCCGCCT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAAGTCTTCATGGGCCATaGTGCCCCCTTCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKSLHGP*CPLPGG Trigger: ACCTCCTGGAAGGGGGCAGCATGGCCCATGAAGACT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACTGAGCTGTAGAGGATaGAGGGCTAGTGGACCCCTG | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKLSCRG*RASGPL Trigger: CAGGGGTCCACTAGCCCTCCATCCTCTACAGCTCAG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACCACAGAAGTCTTCATaGGCCATGCTGCCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKPQKSS*AMLPPS Trigger: GGAAGGGGGCAGCATGGCCCATGAAGACTTCTGTGG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCACAGTTGTAGGCCATaGGCTGGCTCCTCTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAHSCRP*AGSSEQ Trigger: TTGCTCAGAGGAGCCAGCCCATGGCCTACAACTGTG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR TCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCTCCCGGCTGAGCACTaGGAGAGTAACTTTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPALPAEH*ESNFLG Trigger: TCCAAGAAAGTTACTCTCTCAGTGCTCAGCCGGGAG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR TCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTTTCAGTTCCTGGTACTaGGGCTCCACCATCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAFSSWY*GSTIFS Trigger: AGAGAAGATGGTGGAGCCTCAGTACCAGGAACTGAA...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR TCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGGGCTTCTCCAGAAATaGCAGCAACTGTCACACCAT | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAGLLQK*QQLSHH Trigger: ATGGTGTGACAGTTGCTGTCATTTCTGGAGAAGCCC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTTTTTTAACTCGGGTCTaGCAATGCTTCTCCGGACCC | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAFLTRV*QCFSGP Trigger: GGGTCCGGAGAAGCATTGGCAGACCCGAGTTAAAAA...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCCCGCAGTCATCCACTaGAAATCTCCTGGGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAPAVIH*KSPGFI Trigger: AATGAACCCAGGAGATTTGCAGTGGATGACTGCGGG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCCTTTAGGGATAGGTTaGGAATGTTTGGCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAPLGIG*ECLAPG Trigger: CCCAGGAGCCAAACATTCCCAACCTATCCCTAAAGG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATTTTTAACTCGGGTCTaGCAATGCTTCTCCGGACCC | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKFLTRV*QCFSGP Trigger: GGGTCCGGAGAAGCATTGGCAGACCCGAGTTAAAAA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACCCGCAGTCATCCACTaGAAATCTCCTGGGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKPAVIH*KSPGFI Trigger: AATGAACCCAGGAGATTTGCAGTGGATGACTGCGGG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACCTTTAGGGATAGGTTaGGAATGTTTGGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKPLGIG*ECLAPG Trigger: CCCAGGAGCCAAACATTCCCAACCTATCCCTAAAGG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCAAAGTGGCTTCTCTTaGGATCCTTGTTCTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAQSGFS*DPCSPP Trigger: AGGTGGAGAACAAGGATCCCAAGAGAAGCCACTTTG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR TCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAAAACCTCGATGTGGATaGTCAGGAAATCCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKKPRCG*SGNPPG Trigger: ACCAGGAGGATTTCCTGATCATCCACATCGAGGTTT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR TCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCTAGTTCCCAATCTTTaGTTTCCAGGTTTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPALVPNL*FPGFGP Trigger: AGGGCCAAAACCTGGAAATCAAAGATTGGGAACTAG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAAATTTAGGCGGCACTTaGTGTGCTCCAGGAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKNLGGT*CAPGGN Trigger: ATTTCCTCCTGGAGCACAGCAAGTGCCGCCTAAATT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380421.3 |
||
| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTACCTTCTCCAAGCACTaGTGTGTGATGAGGTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPATFSKH*CVMRFY Trigger: ATAGAACCTCATCACACAGCAGTGCTTGGAGAAGGT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTTGCGAGTGTAAACCTTaGACTTTATTCCCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPACECKP*TLFPGL Trigger: AAGCCCTGGGAATAAAGTCCAAGGTTTACACTCGCA...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGGAATGTTTGGCTCCTaGGTCCAATTTGAAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAGMFGS*VQFEVQ Trigger: TTGGACTTCAAATTGGACCCAGGAGCCAAACATTCC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACAAAGTGGCTTCTCTTaGGATCCTTGTTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKQSGFS*DPCSPP Trigger: AGGTGGAGAACAAGGATCCCAAGAGAAGCCACTTTG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR TCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCTCCTGGGTCCAATTTaGAGTCCAAATATAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPALLGPI*SPNIRL Trigger: CAACCTTATATTTGGACTTCAAATTGGACCCAGGAG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAACCTTCTCCAAGCACTaGTGTGTGATGAGGTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKTFSKH*CVMRFY Trigger: ATAGAACCTCATCACACAGCAGTGCTTGGAGAAGGT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATGCGAGTGTAAACCTTaGACTTTATTCCCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKCECKP*TLFPGL Trigger: AAGCCCTGGGAATAAAGTCCAAGGTTTACACTCGCA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGCAATTAAGACAAAGTaGCTTCTCTTGGGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAAIKTK*LLLGSL Trigger: CAAGGATCCCAAGAGAAGCCACTTTGTCTTAATTGC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGGTGTTCATCACAAATaGACCATGTTGGATAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAGVHHK*TMLDNW Trigger: CCAGTTATCCAACATGGTCCATTTGTGATGAACACC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR TCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACTCCTGGGTCCAATTTaGAGTCCAAATATAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKLLGPI*SPNIRL Trigger: CAACCTTATATTTGGACTTCAAATTGGACCCAGGAG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAATATAAGGTTGGTGTaGGAGTGTAAACCTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPANIRLV*ECKPWT Trigger: AGTCCAAGGTTTACACTCGCACACCAACCTTATATT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATTCAAAACCTCGATGTaGATGATCAGGAAATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKFKTSM*MIRKSS Trigger: GGAGGATTTCCTGATCATCCACATCGAGGTTTTGAA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGCAATTAAGACAAAGTaGCTTCTCTTGGGATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKAIKTK*LLLGSL Trigger: CAAGGATCCCAAGAGAAGCCACTTTGTCTTAATTGC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGGTGTTCATCACAAATaGACCATGTTGGATAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKGVHHK*TMLDNW Trigger: CCAGTTATCCAACATGGTCCATTTGTGATGAACACC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGTTATCACGTTAGTGTaGAATTCTTTAGAAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAVITLV*NSLEAP Trigger: CGGTGCTTCTAAAGAATTCCACACTAACGTGATAAC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGAGAAATCTCTTCATTaGTGTTCATCACAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPAEKSLH*CSSQMD Trigger: GTCCATTTGTGATGAACACCAATGAAGAGATTTCTC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTTTGATTTCCAGGTTTTaGCCCTTTCAAACCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPALISRF*PFQTHF Trigger: AAAATGGGTTTGAAAGGGCCAAAACCTGGAAATCAA...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR GCA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAGGTTTATTTGCATGTaGCAGGAAATATCCTACATT | + |
|
Preference number: 4 (lower is better) Translates to: CYKNHVITLVWNSLEAPARFICM*QEISYI Trigger: AATGTAGGATATTTCCTGGCACATGCAAATAAACCT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGAGAAATCTCTTCATTaGTGTTCATCACAAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKEKSLH*CSSQMD Trigger: GTCCATTTGTGATGAACACCAATGAAGAGATTTCTC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAATTGATTTCCAGGTTTTaGCCCTTTCAAACCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKLISRF*PFQTHF Trigger: AAAATGGGTTTGAAAGGGCCAAAACCTGGAAATCAA...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAAGGTTTATTTGCATGTaGCAGGAAATATCCTACATT | + |
|
Preference number: 4 (lower is better) Translates to: YKNHVITLVWNSLEAPAKRFICM*QEISYI Trigger: AATGTAGGATATTTCCTGGCACATGCAAATAAACCT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS CCA 90 bp | TGTCACTCCACTCTCGCTCCGCCCTACGCCTCTCCCAGGCCAGCTTaGCGGCCCTTTGGCCTCCCTGCCTCTCGTGCCGGGAAGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: CHSTLAPPYASPRPA*RPFGLPASRAGKRC Trigger: GCATCTCTTCCCGGCACGAGAGGCAGGGAGGCCAAAGGGCCGCCAAGCTGGCCTGGGAGAGGCGTAGGGCGGAGCGAGAGTGGAGTGACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS GCA 90 bp | GGTCTGCCAATGCTTCTCCGGACCCTCGCTCCAACCCCTTCCGACTaGTCCCGGCTGAGCACTGAGAGAGTAACTTTCTTGGAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLPMLLRTLAPTPSD*SRLSTERVTFLEDP Trigger: GGGGTCCTCCAAGAAAGTTACTCTCTCAGTGCTCAGCCGGGAGCAGTCGGAAGGGGTTGGAGCGAGGGTCCGGAGAAGCATTGGCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000471725.1 |
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| CDS GCA 90 bp | AGTTGTAGGCCATGGGCTGGCTCCTCTGAGCAAGGCATCTCAGCGTaGAGAATGCCCCGGCCCGCAGTCATCCACTGCAAATCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCRPWAGSSEQGISA*RMPRPAVIHCKSPG Trigger: CCCAGGAGATTTGCAGTGGATGACTGCGGGCCGGGGCATTCTGCACGCTGAGATGCCTTGCTCAGAGGAGCCAGCCCATGGCCTACAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000476381.5 |
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| CDS GCA 90 bp | GGCCATGGGCTGGCTCCTCTGAGCAAGGCATCTCAGCGTGCAGAATaGCCCGGCCCGCAGTCATCCACTGCAAATCTCCTGGGTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GHGLAPLSKASQRAE*PGPQSSTANLLGSF Trigger: AAATGAACCCAGGAGATTTGCAGTGGATGACTGCGGGCCGGGGCATTCTGCACGCTGAGATGCCTTGCTCAGAGGAGCCAGCCCATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000476381.5 |
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| CDS CCA 90 bp | ACCATCTTCTCTGAGCTCCTCAAATTAACCCACAGTTGTAGGCCATaGGCTGGCTCCTCTGAGCAAGGCATCTCAGCGTGCAGAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TIFSELLKLTHSCRP*AGSSEQGISACRMP Trigger: GGGCATTCTGCACGCTGAGATGCCTTGCTCAGAGGAGCCAGCCCATGGCCTACAACTGTGGGTTAATTTGAGGAGCTCAGAGAAGATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000476381.5 |
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| CDS-3UTR CAA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACTCTCCCAGGCCAGCTaGGCGGCCCTTTGGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YKNHVITLVWNSLEAPAKLSQAS*AALWPP Trigger: GGGAGGCCAAAGGGCCGCCAAGCTGGCCTGGGAGAG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380421.3 |
||
| CDS GCA 90 bp | CAGTATGAGTGTAGGGTAGGTGAAAGGAATGGCTTCCATTATTGCTaGAAAGCAAGCCACAGCGCCTTCAACGTGTTAGCAGAGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QYECRVGERNGFHYC*KASHSAFNVLAEKG Trigger: TCCCTTCTCTGCTAACACGTTGAAGGCGCTGTGGCTTGCTTTGCAGCAATAATGGAAGCCATTCCTTTCACCTACCCTACACTCATACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471725.1 |
||
| CDS GCA 90 bp | ATCCAGTATGAGTGTAGGGTAGGTGAAAGGAATGGCTTCCATTATTaGTGCAAAGCAAGCCACAGCGCCTTCAACGTGTTAGCAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IQYECRVGERNGFHY*CKASHSAFNVLAEK Trigger: CTTCTCTGCTAACACGTTGAAGGCGCTGTGGCTTGCTTTGCAGCAATAATGGAAGCCATTCCTTTCACCTACCCTACACTCATACTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471725.1 |
||
| CDS TCA 90 bp | GTGCATCATCGGGCCCAATATACACATCTCCAGATATCGTGTAAATaGAGCTTGTCCACCCTGGAAAGGACCAGCAACATTAACATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VHHRAQYTHLQISCK*SLSTLERTSNINML Trigger: TAACATGTTAATGTTGCTGGTCCTTTCCAGGGTGGACAAGCTTCATTTACACGATATCTGGAGATGTGTATATTGGGCCCGATGATGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492432.5 |
||
| CDS-3UTR CAA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTCTTCTCTTGGGATCCTaGTTCTCCACCTGGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: CYKNHVITLVWNSLEAPALLLGS*FSTWTL Trigger: CAGTGTCCAGGTGGAGAACAAGGATCCCAAGAGAAG...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACCCTTTAGGGATAGGTaGGGAATGTTTGGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YKNHVITLVWNSLEAPAKPFRDR*GMFGSW Trigger: CCAGGAGCCAAACATTCCCAACCTATCCCTAAAGGG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAACTTCTCTTGGGATCCTaGTTCTCCACCTGGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: YKNHVITLVWNSLEAPAKLLLGS*FSTWTL Trigger: CAGTGTCCAGGTGGAGAACAAGGATCCCAAGAGAAG...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAGAGAGAGTAACTTTCTaGGAGGACCCCATATCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YKNHVITLVWNSLEAPAKERVTF*EDPISE Trigger: CTCCGATATGGGGTCCTCCAAGAAAGTTACTCTCTC...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTATAGGTTGGGAATGTTaGGCTCCTGGGTCCAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYKNHVITLVWNSLEAPAIGWEC*APGSNL Trigger: CAAATTGGACCCAGGAGCCAAACATTCCCAACCTAT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAACAAAGTGGCTTCTCTaGGGATCCTTGTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: YKNHVITLVWNSLEAPAKTKWLL*GSLFST Trigger: GGTGGAGAACAAGGATCCCAAGAGAAGCCACTTTGT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAGTCCAAATATAAGGTaGGTGTGCGAGTGTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: CYKNHVITLVWNSLEAPASPNIR*VCECKP Trigger: AGGTTTACACTCGCACACCAACCTTATATTTGGACT...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTGCTCCTGGGTCCAATTaGAAGTCCAAATATAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CYKNHVITLVWNSLEAPAAPGSN*KSKYKV Trigger: AACCTTATATTTGGACTTCAAATTGGACCCAGGAGC...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTAAAACTAGTTCCCAATCTTaGATTTCCAGGTTTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YKNHVITLVWNSLEAPAKTSSQS*ISRFWP Trigger: GGGCCAAAACCTGGAAATCAAAGATTGGGAACTAGT...TTTAGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS-3UTR CAA 90 bp | TGTTACAAAAACCATGTTATCACGTTAGTGTGGAATTCTTTAGAAGCACCGGCTTTTGATTTCCAGGTTTaGGCCCTTTCAAACCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CYKNHVITLVWNSLEAPAFDFQV*ALSNPF Trigger: AAATGGGTTTGAAAGGGCCAAAACCTGGAAATCAAA...AGCCGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGTTTTTGTAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
||
| CDS CCA 72 bp | ACTCTCGCTCCGCCCTACGCCTCTCCCAGGCCAGCTTaGCGGCCCTTTGGCCTCCCTGCCTCTCGTGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TLAPPYASPRPA*RPFGLPASRAG Trigger: CCCGGCACGAGAGGCAGGGAGGCCAAAGGGCCGCCAAGCTGGCCTGGGAGAGGCGTAGGGCGGAGCGAGAGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380421.3 |
||
| CDS CCA 72 bp | AGGCGGGAGGCGGGAGTCTACGGGTCTCGGAGGCCCTaGGGCTCCGCCCTCGGGAATGTCACTCCACTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RREAGVYGSRRP*GSALGNVTPLS Trigger: CGAGAGTGGAGTGACATTCCCGAGGGCGGAGCCCCAGGGCCTCCGAGACCCGTAGACTCCCGCCTCCCGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS CCA 72 bp | AGGAGCCCCAGGTACTCACGCTGCGGTAGCGGCACCTaGAGCCTTAGCGGCGGGGGTGACGCGAAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RSPRYSRCGSGT*SLSGGGDAKSR Trigger: GCGGCTCTTCGCGTCACCCCCGCCGCTAAGGCTCCAGGTGCCGCTACCGCAGCGTGAGTACCTGGGGCTCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS CCA 72 bp | AGCTGTAGAGGATGGAGGGGCTGCGGTAGCGGCACCTaGAGCCTTAGCGGCGGGGGTGACGCGAAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SCRGWRGCGSGT*SLSGGGDAKSR Trigger: GCGGCTCTTCGCGTCACCCCCGCCGCTAAGGCTCCAGGTGCCGCTACCGCAGCCCCTCCATCCTCTACAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000471725.1 |
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| CDS GCA 72 bp | CTCTCCCAGGCCAGCTTGGCGGCCCTTTGGCCTCCCTaGCTCTCGTGCCGGGAAGAGATGCTCACTCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LSQASLAALWPP*LSCREEMLTRV Trigger: TACCCGAGTGAGCATCTCTTCCCGGCACGAGAGGCAGGGAGGCCAAAGGGCCGCCAAGCTGGCCTGGGAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS GCA 72 bp | CCATGGGCTGGCTCCTCTGAGCAAGGCATCTCAGCGTaGAGAATGCCCCGGCCCGCAGTCATCCACTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PWAGSSEQGISA*RMPRPAVIHCK Trigger: TTTGCAGTGGATGACTGCGGGCCGGGGCATTCTGCACGCTGAGATGCCTTGCTCAGAGGAGCCAGCCCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000476381.5 |
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| CDS GCA 72 bp | CTGGCTCCTCTGAGCAAGGCATCTCAGCGTGCAGAATaGCCCGGCCCGCAGTCATCCACTGCAAATCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LAPLSKASQRAE*PGPQSSTANLL Trigger: CAGGAGATTTGCAGTGGATGACTGCGGGCCGGGGCATTCTGCACGCTGAGATGCCTTGCTCAGAGGAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000476381.5 |
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| CDS TCA 72 bp | CGCTCCAACCCCTTCCGACTGCTCCCGGCTGAGCACTaGGAGAGTAACTTTCTTGGAGGACCCCATATCGGA | + |
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Preference number: 6 (lower is better) Translates to: RSNPFRLLPAEH*ESNFLGGPHIG Trigger: TCCGATATGGGGTCCTCCAAGAAAGTTACTCTCTCAGTGCTCAGCCGGGAGCAGTCGGAAGGGGTTGGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000471725.1 |
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| CDS GCA 72 bp | GGAAGAGATGCTCACTCGGGTAATTTAGGCGGCACTTaGTGTGCTCCAGGAGGAAATGTGTGGCCCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GRDAHSGNLGGT*CAPGGNVWPGQ Trigger: CTGCCCGGGCCACACATTTCCTCCTGGAGCACAGCAAGTGCCGCCTAAATTACCCGAGTGAGCATCTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380421.3 |
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| CDS GCA 72 bp | ATGCTTCTCCGGACCCTCGCTCCAACCCCTTCCGACTaGTCCCGGCTGAGCACTGAGAGAGTAACTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: MLLRTLAPTPSD*SRLSTERVTFL Trigger: CAAGAAAGTTACTCTCTCAGTGCTCAGCCGGGAGCAGTCGGAAGGGGTTGGAGCGAGGGTCCGGAGAAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000471725.1 |
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| CDS CCA 72 bp | TCTGAGCTCCTCAAATTAACCCACAGTTGTAGGCCATaGGCTGGCTCCTCTGAGCAAGGCATCTCAGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: SELLKLTHSCRP*AGSSEQGISAC Trigger: GCACGCTGAGATGCCTTGCTCAGAGGAGCCAGCCCATGGCCTACAACTGTGGGTTAATTTGAGGAGCTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000476381.5 |
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| CDS GCA 72 bp | TTTTACCAGTGTGTCCACAGAAGTCTTCATGGGCCATaGTGCCCCCTTCCAGGAGGTAGGATACTGTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FYQCVHRSLHGP*CPLPGGRILFQ Trigger: TTGAAACAGTATCCTACCTCCTGGAAGGGGGCAGCATGGCCCATGAAGACTTCTGTGGACACACTGGTAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000476381.5 |
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| CDS GCA 72 bp | TGTAGGGTAGGTGAAAGGAATGGCTTCCATTATTGCTaGAAAGCAAGCCACAGCGCCTTCAACGTGTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: CRVGERNGFHYC*KASHSAFNVLA Trigger: TGCTAACACGTTGAAGGCGCTGTGGCTTGCTTTGCAGCAATAATGGAAGCCATTCCTTTCACCTACCCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471725.1 |
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| CDS GCA 72 bp | GAGTGTAGGGTAGGTGAAAGGAATGGCTTCCATTATTaGTGCAAAGCAAGCCACAGCGCCTTCAACGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: ECRVGERNGFHY*CKASHSAFNVL Trigger: TAACACGTTGAAGGCGCTGTGGCTTGCTTTGCAGCAATAATGGAAGCCATTCCTTTCACCTACCCTACACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471725.1 |
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| CDS TCA 72 bp | CGGGCCCAATATACACATCTCCAGATATCGTGTAAATaGAGCTTGTCCACCCTGGAAAGGACCAGCAACATT | + |
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Preference number: 6 (lower is better) Translates to: RAQYTHLQISCK*SLSTLERTSNI Trigger: AATGTTGCTGGTCCTTTCCAGGGTGGACAAGCTTCATTTACACGATATCTGGAGATGTGTATATTGGGCCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492432.5 |
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| CDS TCA 72 bp | GACCTGCTCTTCCGCTTTCCACTAGTTCCCAATCTTTaGTTTCCAGGTTTTGGCCCTTTCAAACCCATTTTT | + |
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Preference number: 6 (lower is better) Translates to: DLLFRFPLVPNL*FPGFGPFKPIF Trigger: AAAAATGGGTTTGAAAGGGCCAAAACCTGGAAATCAAAGATTGGGAACTAGTGGAAAGCGGAAGAGCAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000492432.5 |
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| CDS CAA 72 bp | AAGCTTGTCCACCCTTTAGGGATAGGTTGGGAATGTTaGGCTCCTGGGTCCAATTTGAAGTCCAAATATAAG | + |
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Preference number: 6 (lower is better) Translates to: KLVHPLGIGWEC*APGSNLKSKYK Trigger: CTTATATTTGGACTTCAAATTGGACCCAGGAGCCAAACATTCCCAACCTATCCCTAAAGGGTGGACAAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380420.10 ENST00000380421.3 |
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| CDS CAA 72 bp | AGACCTGCTCTTCCGCTTTCCACTAGTTCCCAATCTTaGATTTCCAGGTTTTGGCCCTTTCAAACCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: RPALPLSTSSQS*ISRFWPFQTHF Trigger: AAAATGGGTTTGAAAGGGCCAAAACCTGGAAATCAAAGATTGGGAACTAGTGGAAAGCGGAAGAGCAGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380420.10 ENST00000380421.3 ENST00000492432.5 |
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| CDS TCA 72 bp | AGCAGAGAAGGGAATGTTTCAAAACCTCGATGTGGATaGTCAGGAAATCCTCCTGGTCTACCTCCTTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: SREGNVSKPRCG*SGNPPGLPPLN Trigger: ATTTAAAGGAGGTAGACCAGGAGGATTTCCTGATCATCCACATCGAGGTTTTGAAACATTCCCTTCTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471725.1 |
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