Pregenerated sensors for PIPOX (Homo sapiens)
Ensembl gene IDs: ENSG00000179761Ensembl transcript IDs: ENST00000323372.9, ENST00000419875.2, ENST00000466889.5, ENST00000469082.1, ENST00000484308.5, ENST00000577182.5, ENST00000578748.6, ENST00000580241.5, ENST00000580383.5, ENST00000583215.5
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGAGCCACCACACCCGGCCCCCAGCAAAGAGAATTTTTAACAACTaGTTTGGTCTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGAT | + |
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Preference number: 1 (lower is better) Translates to: VSHHTRPPAKRIFNN*FGLQSQFLCPLLTD Trigger: ATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAGACCAAAGCAGTTGTTAAAAATTCTCTTTGCTGGGGGCCGGGTGTGGTGGCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR GCA 90 bp | AAGAGAATTTTTAACAACTGCTTTGGTCTCCAGAGCCAGTTCTTGTaGCCTCTTCTTACTGATATACCCATCTCAAACGTCCTTGCTACT | + |
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Preference number: 1 (lower is better) Translates to: KRIFNNCFGLQSQFL*PLLTDIPISNVLAT Trigger: AGTAGCAAGGACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAGACCAAAGCAGTTGTTAAAAATTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCAGCAATCTCGGCTCACTaGCACCTCCACCTCCCGGGT | + |
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Preference number: 2 (lower is better) Translates to: SEITLFTLLGADLVKSIPAISAH*HLHLPG Trigger: ACCCGGGAGGTGGAGGTGGCAGTGAGCCGAGATTGC...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR CAA 90 bp | GCCACCACACCCGGCCCCCAGCAAAGAGAATTTTTAACAACTGCTTaGGTCTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATAC | + |
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Preference number: 2 (lower is better) Translates to: ATTPGPQQREFLTTA*VSRASSCALFLLIY Trigger: GTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAGACCAAAGCAGTTGTTAAAAATTCTCTTTGCTGGGGGCCGGGTGTGGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR CAA 90 bp | TTAGGAGAAGGAACTCCAAGAGCAGTAGTGATCTCTGAGATCACCTaGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LGEGTPRAVVISEIT*FTLLGADLVKSIPS Trigger: GCTTGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGGAGTTCCTTCTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGCTGGTCTTGAATTCCTaGCCTCAGGTGATCCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GADLVKSIPSSSNIPAKRLVLNS*PQVIRL Trigger: CAGGCGGATCACCTGAGGCCAGGAATTCAAGACCAG...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGGACACTCCCTTCATCTaGGACATCTTCTCCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: SQILWAFVMEAGLSFRRRDTPFI*DIFSIC Trigger: ACAGATGGAGAAGATGTCTCAGATGAAGGGAGTGTC...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR CAA 90 bp | AGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCCTaGCTACTCTGTGATTGTAGAATATCTGATCAACCTTCTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SSCALFLLIYPSQTS*LLCDCRISDQPSGS Trigger: GCTCCCAGAAGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR CAA 90 bp | GCAAAGAGAATTTTTAACAACTGCTTTGGTCTCCAGAGCCAGTTCTaGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: AKRIFNNCFGLQSQF*CPLLTDIPISNVLA Trigger: AGCAAGGACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAGACCAAAGCAGTTGTTAAAAATTCTCTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR TCA 90 bp | TATACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACGGCAGAAGAAAAGGATaGTATCTCAGGGACACTCCC | + |
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Preference number: 2 (lower is better) Translates to: YTHLKRPCYSVIVEYLINGRRKG*YLRDTP Trigger: GGGAGTGTCCCTGAGATATCATCCTTTTCTTCTGCC...GTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTTTACGGGGGATTCAAGTaGGGCAGAAGAAAAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ADLVKSIPSSSNIPAKRFYGGFK*GRRKRE Trigger: CTCCCTTTTTCTTCTGCCTCACTTGAATCCCCCGTA...AAACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR TCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTGTGCCCTCTTCTTACTaGTATACCCATCTCAAACGT | + |
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Preference number: 2 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVVPSSY*YTHLKR Trigger: ACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCAC...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGCTCCAGAGCCAGTTCTaGTGCCCTCTTCTTACTGAT | + |
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Preference number: 3 (lower is better) Translates to: SQILWAFVMEAGLSFRRRLQSQF*CPLLTD Trigger: ATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCATTTTTAACAACTGCTTaGGTCTCCAGAGCCAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: SEITLFTLLGADLVKSIPFLTTA*VSRASS Trigger: AGAACTGGCTCTGGAGACCAAAGCAGTTGTTAAAAA...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR CCA 72 bp | AATATTTATTGTTCATCAAAGACGAGCCAGATTTTATaGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: NIYCSSKTSQIL*AFVMEAGLSFR Trigger: CCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCTCGTCTTTGATGAACAATAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCACCAGGTGGTATGCAGTaGAGCAGCCCTGGATCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPPGGMQ*SSPGSP Trigger: CGGGGATCCAGGGCTGCTTCACTGCATACCACCTGG...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGTGGTGTTCTACCCTCTaGCTCGACAGATTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPEWCSTL*LDRLAW Trigger: CCAGGCCAATCTGTCGAGGCAGAGGGTAGAACACCA...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | CCAAGAGCAGTAGTGATCTCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATACATGCAGCTCTCAATaGCAGCAGGCTCGGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PRAVVISEITLFTLLGADTCSSQ*QQARAS Trigger: TGAAGCCCGAGCCTGCTGTCATTGAGAGCTGCATGT...ATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGTTTGGCCAGGTGGTATaGAGTGAAGCAGCCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPEFGQVV*SEAALD Trigger: ATCCAGGGCTGCTTCACTGCATACCACCTGGCCAAA...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGAATCCAGTCTGCCTGTaGAATTGGGTTCCAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPENPVCL*NWVPAS Trigger: CGAGGCTGGAACCCAATTGCACAGGCAGACTGGATT...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCTCCGATGTCTGTGCGTaGTGTGGGGCAGTCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LQSQFLCPLLTDIPISNVSDVCA*CGAVPL Trigger: GAGCGGGACTGCCCCACAGCACGCACAGACATCGGA...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | CCAAGAGCAGTAGTGATCTCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATCTGTGTTTGGCCAGGTaGTATGCAGTGAAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PRAVVISEITLFTLLGADLCLAR*YAVKQP Trigger: GGGCTGCTTCACTGCATACCACCTGGCCAAACACAG...ATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGCTTTCTGAGCCGCCATaGTGCCACTCAGCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: SQILWAFVMEAGLSFRRRLSEPP*CHSAPQ Trigger: CTGTGGGGCTGAGTGGCATCATGGCGGCTCAGAAAG...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | CCAAGAGCAGTAGTGATCTCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATCATCCTGCAGGGCTCTaGGGGCCTTATATGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: PRAVVISEITLFTLLGADHPAGL*GPYMHR Trigger: TCTATGCATATAAGGCCCTCAGAGCCCTGCAGGATG...ATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCAGCCAGTAACACACGTTaGTCCGCAGGGTCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPASNTR*SAGSGE Trigger: CTCTCCAGACCCTGCGGATCAACGTGTGTTACTGGC...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCTGGGTTCCAGCCTCGTaGTCCAGCTGGGCCCATATC | + |
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Preference number: 4 (lower is better) Translates to: LQSQFLCPLLTDIPISNVWVPAS*SSWAHI Trigger: GATATGGGCCCAGCTGGAGCACGAGGCTGGAACCCA...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCAGTCAAAGGTGGGCTTTaGCCAGGCTTGGGAAACGGC | + |
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Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPVKGGL*PGLGNG Trigger: GCCGTTTCCCAAGCCTGGGCAAAGCCCACCTTTGAC...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCAGACCTTCATCAGCCCTaGGTACTCTCCTGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPDLHQP*VLSCGQ Trigger: CTGCCCACAGGAGAGTACCCAGGGCTGATGAAGGTC...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGGACACTCCCTTCATCTaGGACATCTTCTCCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPEDTPFI*DIFSIC Trigger: ACAGATGGAGAAGATGTCTCAGATGAAGGGAGTGTC...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGAGCAGTAGTGATCTCTaGGATCACCTTGTTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPESSSDL*DHLVHP Trigger: AGGGTGAACAAGGTGATCTCAGAGATCACTACTGCT...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGTTTTATGGGCATTTGTaGTGGAGGCTGGCCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPEFYGHL*WRLALA Trigger: AGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAA...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCAATCCGGCTTTGTCCATaGGAGCTTCCTCGGGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPIRLCP*ELPREC Trigger: ACACTCCCGAGGAAGCTCCCATGGACAAAGCCGGAT...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGCTTCAGTTCCTCAGATaGAAGACACTGGTGTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPELQFLR*KTLVFY Trigger: GTAGAACACCAGTGTCTTTCATCTGAGGAACTGAAG...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGTCTGAGGGCCTTATATaGATAGATAACTCCTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: FSICETGSCAQKGGFWPESEGLI*IDNSSG Trigger: TCCGGAGGAGTTATCTATGCATATAAGGCCCTCAGA...CTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | CCAAGAGCAGTAGTGATCTCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATCGATCGAGAATGAACTaGTCATCAGGGGTATTCGTG | + |
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Preference number: 4 (lower is better) Translates to: PRAVVISEITLFTLLGADRSRMN*SSGVFV Trigger: CACGAATACCCCTGATGAGCAGTTCATTCTCGATCG...ATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCGGTGGCGATCGAGAATaGACTGCTCATCAGGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LQSQFLCPLLTDIPISNVGGDRE*TAHQGY Trigger: ATACCCCTGATGAGCAGTTCATTCTCGATCGCCACC...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCGGCTTGGGAAACGGCTaGTTCGAAAAGGTGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LQSQFLCPLLTDIPISNVGLGNG*FEKVPS Trigger: ACTTGGCACCTTTTCGAATCAGCCGTTTCCCAAGCC...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCATGTGGTAGAAAGAACTaGTCCAGCAGGAGGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPCGRKN*SSRRIL Trigger: GAGGATCCTCCTGCTGGAGCAGTTCTTTCTACCACA...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCCTCCGTCACGCACTATaGCTCCTAGCTGTCGAATTG | + |
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Preference number: 4 (lower is better) Translates to: LQSQFLCPLLTDIPISNVLRHAL*LLAVEL Trigger: CAATTCGACAGCTAGGAGGCATAGTGCGTGACGGAG...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGGCCAGCTTGAACCCGTaGCCAGAGAATCCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: GADLVKSIPSSSNIPAKRASLNP*PENPAP Trigger: TGGTGCTGGATTCTCTGGGCACGGGTTCAAGCTGGC...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTGCAATCTCGGCTCACTaGCACCTCCACCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVAISAH*HLHLPG Trigger: ACCCGGGAGGTGGAGGTGGCAGTGAGCCGAGATTGC...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | ACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACCTTTGTCTGTGCGTGCTGTaGGGCAGTCCCGCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: THLKRPCYSVIVEYLINLCLCVL*GSPAPQ Trigger: CTGAGGAGCGGGACTGCCCCACAGCACGCACAGACA...AAGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGAAGCTGCTCAGGATCTaGACGTCTCCGATGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SQILWAFVMEAGLSFRRRKLLRI*TSPMSV Trigger: CACAGACATCGGAGACGTCCAGATCCTGAGCAGCTT...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGTACGGGGGATTCAAGTaGGGCAGAAGAAAAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SQILWAFVMEAGLSFRRRYGGFK*GRRKRE Trigger: CTCCCTTTTTCTTCTGCCTCACTTGAATCCCCCGTA...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTGGAGAGGCATCTCAATaGCCAGGGGACGGAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVGEASQ*PGDGGA Trigger: AGCTCCTCCGTCCCCTGGGCATTGAGATGCCTCTCC...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTCCGCTCCTCAGGGTCTaGGTGGTTGCCGTGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVPLLRV*VVAVVI Trigger: TATCACCACGGCAACCACGCAGACCCTGAGGAGCGG...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | CCAAGAGCAGTAGTGATCTCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATGCTGATTCGAAAAGGTaGCAAGTCATAAGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRAVVISEITLFTLLGADADSKR*QVIRWC Trigger: ACACCATCTTATGACTTGGCACCTTTTCGAATCAGC...ATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCATCAGATGAAAGACACTaGTGTTCTACCCTCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPSDERH*CSTLCL Trigger: GAGGCAGAGGGTAGAACACCAGTGTCTTTCATCTGA...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTAGGGGACGGAGGAGCTaGTTGGTCCAAGGACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVRGRRS*LVQGPA Trigger: AGCAGGTCCTTGGACCAACCAGCTCCTCCGTCCCCT...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTGATCCGCAGGGTCTaGAGAGGCATCTCAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GADLVKSIPSSSNIPAKRLIRRV*RGISMP Trigger: GGGCATTGAGATGCCTCTCCAGACCCTGCGGATCAA...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | ACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACCTTGCCAGAGGTCAAAGGTaGGCTTTGCCCAGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: THLKRPCYSVIVEYLINLARGQR*ALPRLG Trigger: CCCAAGCCTGGGCAAAGCCCACCTTTGACCTCTGGC...AAGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGAGGTGGTTTTCACCGTaGCCAGTAGCCCTGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GADLVKSIPSSSNIPAKRRWFSP*PVALGL Trigger: TAAACCCAGGGCTACTGGTCACGGTGAAAACCACCT...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | CCAAGAGCAGTAGTGATCTCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATCATCTCAAACGTCCTTaGTACTCTGTGATTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRAVVISEITLFTLLGADHLKRP*YSVIVE Trigger: TTCTACAATCACAGAGTAGCAAGGACGTTTGAGATG...ATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | GCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTTGCAGTGAAGCAGCCCTaGATCCCCGCCCCAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: ADLVKSIPSSSNIPAKRFAVKQP*IPAPIT Trigger: TGTGATTGGGGCGGGGATCCAGGGCTGCTTCACTGC...AAACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTGTCTGCCTGTGCAATTaGGTTCCAGCCTCGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVVCLCN*VPASCS Trigger: GGAGCACGAGGCTGGAACCCAATTGCACAGGCAGAC...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGGGGCAACCGAATATTTaGGAAACGTTGCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQILWAFVMEAGLSFRRRGQPNI*ETLLQF Trigger: GAACTGAAGCAACGTTTCCCAAATATTCGGTTGCCC...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTGCCCCACTTCTCCCCTaGGCAACCGAATATTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVAPLLP*ATEYLG Trigger: TCCCAAATATTCGGTTGCCCAGGGGAGAAGTGGGGC...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTCTGGGTACTCTCCTGTaGGCAGTCCGTAGATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVLGTLL*AVRRCG Trigger: ACCACATCTACGGACTGCCCACAGGAGAGTACCCAG...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CCA 90 bp | ACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACCTTCTGGTCTTGAATTCCTaGCCTCAGGTGATCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: THLKRPCYSVIVEYLINLLVLNS*PQVIRL Trigger: CAGGCGGATCACCTGAGGCCAGGAATTCAAGACCAG...AAGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR TCA 90 bp | GCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTTTCCCAGAGATCTTTCTaGGCCGCCATGATGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ADLVKSIPSSSNIPAKRFSQRSF*AAMMPL Trigger: GAGTGGCATCATGGCGGCTCAGAAAGATCTCTGGGA...AAACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCCAGAGCCAGTTCTTGTaGCCTCTTCTTACTGATATA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQFLCPLLTDIPISNVQSQFL*PLLTDI Trigger: TATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTG...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | ACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACCTTCCGCCCCAATCACAATaGCGTCCCAGAGATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THLKRPCYSVIVEYLINLPPQSQ*RPRDLS Trigger: AGAAAGATCTCTGGGACGCCATTGTGATTGGGGCGG...AAGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGTCTGCCTCGACAGATTaGCCTGGATTGTCTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SQILWAFVMEAGLSFRRRSASTD*PGLSLI Trigger: AATTAAAGACAATCCAGGCCAATCTGTCGAGGCAGA...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCAAATGTTGTCATACTTTaGGTGGCGATCGAGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEITLFTLLGADLVKSIPNVVIL*VAIENE Trigger: TTCATTCTCGATCGCCACCCAAAGTATGACAACATT...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTGTTGGTCCAAGGACCTaGTGTGATGACCAAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVVGPRT*CDDQAL Trigger: AAGAGCTTGGTCATCACAGCAGGTCCTTGGACCAAC...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGACGAGCCAGATTTTATaGGCATTTGTGATGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GADLVKSIPSSSNIPAKRTSQIL*AFVMEA Trigger: AGCCTCCATCACAAATGCCCATAAAATCTGGCTCGT...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | GCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTTGGCAGAAGAAAAGGATaGTATCTCAGGGACACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLVKSIPSSSNIPAKRFGRRKG*YLRDTP Trigger: GGGAGTGTCCCTGAGATATCATCCTTTTCTTCTGCC...AAACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTAGCAGTAATCCAGTCTaGCTGTGCAATTGGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVSSNPV*LCNWVP Trigger: TGGAACCCAATTGCACAGGCAGACTGGATTACTGCT...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | GCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTTCAGGTAAGTGATCTCTaGCAAAGCTGCTCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLVKSIPSSSNIPAKRFQVSDL*QSCSGS Trigger: AGATCCTGAGCAGCTTTGTCAGAGATCACTTACCTG...AAACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTTTGTCATACTTTGGGTaGCGATCGAGAATGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVLSYFG*RSRMNC Trigger: GCAGTTCATTCTCGATCGCCACCCAAAGTATGACAA...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR CAA 72 bp | GCCCTCTTCTTACTGATATACCCATCTCAAACGTCCTaGCTACTCTGTGATTGTAGAATATCTGATCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFLLIYPSQTS*LLCDCRISDQP Trigger: AGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGTATATCAGTAAGAAGAGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| 3UTR CAA 72 bp | ATTTTTAACAACTGCTTTGGTCTCCAGAGCCAGTTCTaGTGCCCTCTTCTTACTGATATACCCATCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: IFNNCFGLQSQF*CPLLTDIPISN Trigger: GTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAGACCAAAGCAGTTGTTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | TATACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACTTCAGATCAGGTAAGTaGTCTCTGACAAAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTHLKRPCYSVIVEYLINFRSGK*SLTKLL Trigger: GAGCAGCTTTGTCAGAGATCACTTACCTGATCTGAA...GTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTAGAATTTTTAACAACTaGTTTGGTCTCCAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRFSQIHPKLFKYTSKEVRIFNN*FGLQSQ Trigger: CTGGCTCTGGAGACCAAAGCAGTTGTTAAAAATTCT...AACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR TCA 90 bp | GCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGTTTAGAATCCAGCACCAATaGCAATGTTGTCATACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ADLVKSIPSSSNIPAKRFRIQHQ*QCCHTL Trigger: CAAAGTATGACAACATTGTCATTGGTGCTGGATTCT...AAACCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS GCA 90 bp | TCCGATGTCTGTGCGTGCTGTGGGGCAGTCCCGCTCCTCAGGGTCTaGGTGGTTGCCGTGGTGATAGCTGACCTTCATCAGCCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SDVCACCGAVPLLRV*VVAVVIADLHQPWV Trigger: TACCCAGGGCTGATGAAGGTCAGCTATCACCACGGCAACCACGCAGACCCTGAGGAGCGGGACTGCCCCACAGCACGCACAGACATCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS GCA 90 bp | TCTGACAAAGCTGCTCAGGATCTGGACGTCTCCGATGTCTGTGCGTaGTGTGGGGCAGTCCCGCTCCTCAGGGTCTGCGTGGTTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SDKAAQDLDVSDVCA*CGAVPLLRVCVVAV Trigger: CACGGCAACCACGCAGACCCTGAGGAGCGGGACTGCCCCACAGCACGCACAGACATCGGAGACGTCCAGATCCTGAGCAGCTTTGTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS CCA 90 bp | CAAAGCTGCTCAGGATCTGGACGTCTCCGATGTCTGTGCGTGCTGTaGGGCAGTCCCGCTCCTCAGGGTCTGCGTGGTTGCCGTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSCSGSGRLRCLCVL*GSPAPQGLRGCRGD Trigger: ATCACCACGGCAACCACGCAGACCCTGAGGAGCGGGACTGCCCCACAGCACGCACAGACATCGGAGACGTCCAGATCCTGAGCAGCTTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS TCA 90 bp | CCGCCCCAATCACAATGGCGTCCCAGAGATCTTTCTGAGCCGCCATaGTGCCACTCAGCCCCACAGCCACAGAGCCTCAAAGGCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPQSQWRPRDLSEPP*CHSAPQPQSLKGKG Trigger: GCCTTTGCCTTTGAGGCTCTGTGGCTGTGGGGCTGAGTGGCATCATGGCGGCTCAGAAAGATCTCTGGGACGCCATTGTGATTGGGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS TCA 90 bp | CCAGCAGGAGGATCCTCTTCCTGTGTTTGGCCAGGTGGTATGCAGTaGAGCAGCCCTGGATCCCCGCCCCAATCACAATGGCGTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAGGSSSCVWPGGMQ*SSPGSPPQSQWRPR Trigger: TCTGGGACGCCATTGTGATTGGGGCGGGGATCCAGGGCTGCTTCACTGCATACCACCTGGCCAAACACAGGAAGAGGATCCTCCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS CCA 90 bp | CGCAGGGTCTGGAGAGGCATCTCAATGCCCAGGGGACGGAGGAGCTaGTTGGTCCAAGGACCTGCTGTGATGACCAAGCTCTTAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRVWRGISMPRGRRS*LVQGPAVMTKLLAW Trigger: CCAAGCTAAGAGCTTGGTCATCACAGCAGGTCCTTGGACCAACCAGCTCCTCCGTCCCCTGGGCATTGAGATGCCTCTCCAGACCCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000323372.9 ENST00000469082.1 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS GCA 90 bp | CATCTCAATGCCCAGGGGACGGAGGAGCTGGTTGGTCCAAGGACCTaGTGTGATGACCAAGCTCTTAGCTTGGTAGCTCCTGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLNAQGTEELVGPRT*CDDQALSLVAPGGG Trigger: ACCACCTCCAGGAGCTACCAAGCTAAGAGCTTGGTCATCACAGCAGGTCCTTGGACCAACCAGCTCCTCCGTCCCCTGGGCATTGAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000466889.5 ENST00000469082.1 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS CCA 90 bp | TTCTCCATCTGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTaGCCAGAGGTCAAAGGTGGGCTTTGCCCAGGCTTGGGAAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSICETGSCAQKGGF*PEVKGGLCPGLGNG Trigger: GCCGTTTCCCAAGCCTGGGCAAAGCCCACCTTTGACCTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323372.9 ENST00000580241.5 ENST00000583215.5 |
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| CDS GCA 90 bp | CCACAATCCATCAGACCTATCGCGATTCTTGCTCCCAGGATGCAATaGGCCCCCGTTCGCCCTTTAGACCCTTTGGCGTTGCAAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQSIRPIAILAPRMQ*APVRPLDPLALQTG Trigger: CCCAGTTTGCAACGCCAAAGGGTCTAAAGGGCGAACGGGGGCGCATTGCATCCTGGGAGCAAGAATCGCGATAGGTCTGATGGATTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS CCA 90 bp | AAGAACTGCTCCAGCAGGAGGATCCTCTTCCTGTGTTTGGCCAGGTaGTATGCAGTGAAGCAGCCCTGGATCCCCGCCCCAATCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: KNCSSRRILFLCLAR*YAVKQPWIPAPITM Trigger: CATTGTGATTGGGGCGGGGATCCAGGGCTGCTTCACTGCATACCACCTGGCCAAACACAGGAAGAGGATCCTCCTGCTGGAGCAGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS TCA 90 bp | GTCCAAATTCCTGTCCTCCTGGCAAAGAGGAGGATTGTGCGCTTCTaGGAGTCTCCTACCCAAGGATCCCTCTCCCTCTTTCCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQIPVLLAKRRIVRF*ESPTQGSLSLFPAA Trigger: GGCAGCAGGAAAGAGGGAGAGGGATCCTTGGGTAGGAGACTCTCAGAAGCGCACAATCCTCCTCTTTGCCAGGAGGACAGGAATTTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484308.5 |
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| CDS-3UTR CAA 90 bp | CCAAGAGCAGTAGTGATCTCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTCGGATTATCCGGCTTaGTCCATGGGAGCTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRAVVISEITLFTLLGADSDYPA*SMGASS Trigger: CGAGGAAGCTCCCATGGACAAAGCCGGATAATCCGA...ATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGATCACTACTGCTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS-3UTR CAA 90 bp | AGCCAGATTTTATGGGCATTTGTGATGGAGGCTGGCCTTAGCTTTAGGAGAAGGGGACGGAGGAGCTGGTaGGTCCAAGGACCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQILWAFVMEAGLSFRRRGRRSW*VQGPAV Trigger: CACAGCAGGTCCTTGGACCAACCAGCTCCTCCGTCC...CCTTCTCCTAAAGCTAAGGCCAGCCTCCATCACAAATGCCCATAAAATCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS CCA 90 bp | TTGGCGTTGCAAACTGGGAGTTGGAGTCCGGGGTACGCAGGTAGCTaGGCGTTGTCAGGATTACAAACTCTCCACTTTAGGCTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LALQTGSWSPGYAGS*ALSGLQTLHFRLPL Trigger: AAGAGGAAGCCTAAAGTGGAGAGTTTGTAATCCTGACAACGCCCAGCTACCTGCGTACCCCGGACTCCAACTCCCAGTTTGCAACGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS TCA 90 bp | ATGCAGCTCTCAATGACAGCAGGCTCGGGCTTCAGATCAGGTAAGTaGTCTCTGACAAAGCTGCTCAGGATCTGGACGTCTCCGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MQLSMTAGSGFRSGK*SLTKLLRIWTSPMS Trigger: AGACATCGGAGACGTCCAGATCCTGAGCAGCTTTGTCAGAGATCACTTACCTGATCTGAAGCCCGAGCCTGCTGTCATTGAGAGCTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS TCA 90 bp | ATATCTCAGGGACACTCCCTTCATCTGAGACATCTTCTCCATCTGTaGAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTGGCCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ISQGHSLHLRHLLHL*NWLLCTEGRLLARG Trigger: ACCTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACAGATGGAGAAGATGTCTCAGATGAAGGGAGTGTCCCTGAGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323372.9 ENST00000580241.5 ENST00000583215.5 |
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| CDS TCA 90 bp | AGTCCTTTATGGAGGACCCCACGGGCTTCTTTCAACTTCAACCCCTaGACCTTCAGCACCAGCTGGTGTGAAGAATCCAATGAGACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPLWRTPRASFNFNP*TFSTSWCEESNETG Trigger: ACCAGTCTCATTGGATTCTTCACACCAGCTGGTGCTGAAGGTTCAGGGGTTGAAGTTGAAAGAAGCCCGTGGGGTCCTCCATAAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577182.5 ENST00000583215.5 |
||
| CDS TCA 90 bp | ACCAGCTCCATCCAACACCACACCTTGCTCCTTTCTGTTCATGCCTaGGGACTCCAAGGGCATGATAGCCCATATCCCATTACCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TSSIQHHTLLLSVHA*GLQGHDSPYPITKM Trigger: CATTTTGGTAATGGGATATGGGCTATCATGCCCTTGGAGTCCTCAGGCATGAACAGAAAGGAGCAAGGTGTGGTGTTGGATGGAGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578748.6 |
||
| CDS CCA 90 bp | CCCGTGCCCAGAGAATCCAGCACCAATGACAATGTTGTCATACTTTaGGTGGCGATCGAGAATGAACTGCTCATCAGGGGTATTCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PVPRESSTNDNVVIL*VAIENELLIRGIRV Trigger: TACACGAATACCCCTGATGAGCAGTTCATTCTCGATCGCCACCCAAAGTATGACAACATTGTCATTGGTGCTGGATTCTCTGGGCACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS-3UTR CAA 90 bp | TCTGAGATCACCTTGTTCACCCTCCTCGGGGCAGATTTAGTCAAATCCATCCCACTCTGCCTCGACAGATaGGCCTGGATTGTCTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SEITLFTLLGADLVKSIPLCLDR*AWIVFN Trigger: ATTAAAGACAATCCAGGCCAATCTGTCGAGGCAGAG...TGGGATGGATTTGACTAAATCTGCCCCGAGGAGGGTGAACAAGGTGATCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGGACCAAGCTCTTAGCTaGGTAGCTCCTGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GADLVKSIPSSSNIPAKRDQALS*VAPGGG Trigger: ACCACCTCCAGGAGCTACCAAGCTAAGAGCTTGGTC...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS CCA 90 bp | TGCCCAGAGAATCCAGCACCAATGACAATGTTGTCATACTTTGGGTaGCGATCGAGAATGAACTGCTCATCAGGGGTATTCGTGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: CPENPAPMTMLSYFG*RSRMNCSSGVFVYM Trigger: CATGTACACGAATACCCCTGATGAGCAGTTCATTCTCGATCGCCACCCAAAGTATGACAACATTGTCATTGGTGCTGGATTCTCTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS CCA 90 bp | AGCGTCATTTTCTGTCTCAAATGGCTTTTCTCTTTACCAATATGGTaGCCTGGTCCAGCCACACCCGATGGTAGAACCAAACGGTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVIFCLKWLFSLPIW*PGPATPDGRTKRSS Trigger: ACTTGACCGTTTGGTTCTACCATCGGGTGTGGCTGGACCAGGCCACCATATTGGTAAAGAGAAAAGCCATTTGAGACAGAAAATGACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578748.6 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCCCATCTCAAACGTCCTaGCTACTCTGTGATTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQSQFLCPLLTDIPISNVPSQTS*LLCDCR Trigger: TCTACAATCACAGAGTAGCAAGGACGTTTGAGATGG...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CAA 90 bp | ACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACCTTATCTCTGAGATCACCTaGTTCACCCTCCTCGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: THLKRPCYSVIVEYLINLISEIT*FTLLGA Trigger: TGCCCCGAGGAGGGTGAACAAGGTGATCTCAGAGAT...AAGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGGCACCAATGACAATGTaGTCATACTTTGGGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GADLVKSIPSSSNIPAKRAPMTM*SYFGWR Trigger: TCGCCACCCAAAGTATGACAACATTGTCATTGGTGC...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAGCCAGTTCTTGTGCCCTCTTCTTACTGATATACCCATCTCAAACGTCTTTTTAACAACTGCTTaGGTCTCCAGAGCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQSQFLCPLLTDIPISNVFLTTA*VSRASS Trigger: AGAACTGGCTCTGGAGACCAAAGCAGTTGTTAAAAA...GACGTTTGAGATGGGTATATCAGTAAGAAGAGGGCACAAGAACTGGCTCTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CAA 90 bp | ACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACCTTATAACTCCTCCGGAATaGTCCAAGAGCCCCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: THLKRPCYSVIVEYLINLITPPE*SKSPTS Trigger: AGAAGTGGGGCTCTTGGACAATTCCGGAGGAGTTAT...AAGGTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGATTTAGTCAAATCCATCCCAAGCTCTTCAAATATACCAGCAAAGAGGACAGATTGGCCTGGATaGTCTTTAATTCTTGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GADLVKSIPSSSNIPAKRTDWPG*SLILDS Trigger: AGAATCAAGAATTAAAGACAATCCAGGCCAATCTGT...CCTCTTTGCTGGTATATTTGAAGAGCTTGGGATGGATTTGACTAAATCTGCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS-3UTR CAA 90 bp | TATACCCATCTCAAACGTCCTTGCTACTCTGTGATTGTAGAATATCTGATCAACTGGGCAACCGAATATTaGGGAAACGTTGCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YTHLKRPCYSVIVEYLINWATEY*GNVASV Trigger: AACTGAAGCAACGTTTCCCAAATATTCGGTTGCCCA...GTTGATCAGATATTCTACAATCACAGAGTAGCAAGGACGTTTGAGATGGGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS GCA 72 bp | TTCGCTCTCCCGAGGCGCCAGCCCACTCCATCTCGTTaGACCGGCAGGCCTCCCCACCCCCTTCTTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FALPRRQPTPSR*TGRPPHPLLVG Trigger: GCCAACAAGAAGGGGGTGGGGAGGCCTGCCGGTGCAACGAGATGGAGTGGGCTGGCGCCTCGGGAGAGCGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000580241.5 |
||
| CDS CCA 72 bp | TTTGTGCTTCCCCCAGCACGTCCGGGTACCGGGCTTTaGGCCTCTCCCGAGCGGGTCTTTGGAGTCCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FVLPPARPGTGL*ASPERVFGVPH Trigger: GTGGGGGACTCCAAAGACCCGCTCGGGAGAGGCCCAAAGCCCGGTACCCGGACGTGCTGGGGGAAGCACAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000580241.5 |
||
| CDS CAA 72 bp | CTTTGTGCTTCCCCCAGCACGTCCGGGTACCGGGCTTaGGGCCTCTCCCGAGCGGGTCTTTGGAGTCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCASPSTSGYRA*GLSRAGLWSPP Trigger: TGGGGGACTCCAAAGACCCGCTCGGGAGAGGCCCAAAGCCCGGTACCCGGACGTGCTGGGGGAAGCACAAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000580241.5 |
||
| CDS GCA 72 bp | GCTGCTCAGGATCTGGACGTCTCCGATGTCTGTGCGTaGTGTGGGGCAGTCCCGCTCCTCAGGGTCTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: AAQDLDVSDVCA*CGAVPLLRVCV Trigger: CACGCAGACCCTGAGGAGCGGGACTGCCCCACAGCACGCACAGACATCGGAGACGTCCAGATCCTGAGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS CCA 72 bp | TCAGGATCTGGACGTCTCCGATGTCTGTGCGTGCTGTaGGGCAGTCCCGCTCCTCAGGGTCTGCGTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSGRLRCLCVL*GSPAPQGLRGC Trigger: GCAACCACGCAGACCCTGAGGAGCGGGACTGCCCCACAGCACGCACAGACATCGGAGACGTCCAGATCCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS CAA 90 bp | CCCAGGATGCAATGCGCCCCCGTTCGCCCTTTAGACCCTTTGGCGTaGCAAACTGGGAGTTGGAGTCCGGGGTACGCAGGTAGCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRMQCAPVRPLDPLA*QTGSWSPGYAGSWA Trigger: CGCCCAGCTACCTGCGTACCCCGGACTCCAACTCCCAGTTTGCAACGCCAAAGGGTCTAAAGGGCGAACGGGGGCGCATTGCATCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000578748.6 |
||
| CDS GCA 72 bp | TGTGCGTGCTGTGGGGCAGTCCCGCTCCTCAGGGTCTaGGTGGTTGCCGTGGTGATAGCTGACCTTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: CACCGAVPLLRV*VVAVVIADLHQ Trigger: CTGATGAAGGTCAGCTATCACCACGGCAACCACGCAGACCCTGAGGAGCGGGACTGCCCCACAGCACGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS GCA 72 bp | CAAAGCTGCTCAGGATCTGGACGTCTCCGATGTCTGTaGGTGCTGTGGGGCAGTCCCGCTCCTCAGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSCSGSGRLRCL*VLWGSPAPQGL Trigger: CAGACCCTGAGGAGCGGGACTGCCCCACAGCACGCACAGACATCGGAGACGTCCAGATCCTGAGCAGCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS CCA 72 bp | AGCCTTCTCCCTGATCATCTGAGCTGGAGCTCACTCTaGCCTCACCCCACCGCAGGTACTCAGGGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLPDHLSWSSL*PHPTAGTQGLL Trigger: CAGGAGGCCCTGAGTACCTGCGGTGGGGTGAGGCCAGAGTGAGCTCCAGCTCAGATGATCAGGGAGAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577182.5 ENST00000583215.5 |
||
| CDS CAA 72 bp | CGGGTACCGGGCTTTGGGCCTCTCCCGAGCGGGTCTTaGGAGTCCCCCACTGTCCATACAAGGAAGTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RVPGFGPLPSGS*ESPTVHTRKWQ Trigger: TTGCCACTTCCTTGTATGGACAGTGGGGGACTCCAAAGACCCGCTCGGGAGAGGCCCAAAGCCCGGTACCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000580241.5 |
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| CDS CAA 90 bp | CTTGCTCCCAGGATGCAATGCGCCCCCGTTCGCCCTTTAGACCCTTaGGCGTTGCAAACTGGGAGTTGGAGTCCGGGGTACGCAGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LAPRMQCAPVRPLDP*ALQTGSWSPGYAGS Trigger: GCTACCTGCGTACCCCGGACTCCAACTCCCAGTTTGCAACGCCAAAGGGTCTAAAGGGCGAACGGGGGCGCATTGCATCCTGGGAGCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000578748.6 |
||
| CDS TCA 72 bp | CCCGCCCCAATCACAATGGCGTCCCAGAGATCTTTCTaGGCCGCCATGATGCCACTCAGCCCCACAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PAPITMASQRSF*AAMMPLSPTAT Trigger: TGTGGCTGTGGGGCTGAGTGGCATCATGGCGGCTCAGAAAGATCTCTGGGACGCCATTGTGATTGGGGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS CCA 72 bp | TCCAGCAGGAGGATCCTCTTCCTGTGTTTGGCCAGGTaGTATGCAGTGAAGCAGCCCTGGATCCCCGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSRRILFLCLAR*YAVKQPWIPAP Trigger: TGGGGCGGGGATCCAGGGCTGCTTCACTGCATACCACCTGGCCAAACACAGGAAGAGGATCCTCCTGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS CAA 72 bp | CAATGCGCCCCCGTTCGCCCTTTAGACCCTTTGGCGTaGCAAACTGGGAGTTGGAGTCCGGGGTACGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QCAPVRPLDPLA*QTGSWSPGYAG Trigger: ACCTGCGTACCCCGGACTCCAACTCCCAGTTTGCAACGCCAAAGGGTCTAAAGGGCGAACGGGGGCGCATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS CCA 72 bp | CTGTGTTTGGCCAGGTGGTATGCAGTGAAGCAGCCCTaGATCCCCGCCCCAATCACAATGGCGTCCCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LCLARWYAVKQP*IPAPITMASQR Trigger: TCTCTGGGACGCCATTGTGATTGGGGCGGGGATCCAGGGCTGCTTCACTGCATACCACCTGGCCAAACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
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| CDS CCA 72 bp | TGGAGAGGCATCTCAATGCCCAGGGGACGGAGGAGCTaGTTGGTCCAAGGACCTGCTGTGATGACCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WRGISMPRGRRS*LVQGPAVMTKL Trigger: GAGCTTGGTCATCACAGCAGGTCCTTGGACCAACCAGCTCCTCCGTCCCCTGGGCATTGAGATGCCTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000469082.1 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS CAA 72 bp | AGGATGCAATGCGCCCCCGTTCGCCCTTTAGACCCTTaGGCGTTGCAAACTGGGAGTTGGAGTCCGGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RMQCAPVRPLDP*ALQTGSWSPGY Trigger: GTACCCCGGACTCCAACTCCCAGTTTGCAACGCCAAAGGGTCTAAAGGGCGAACGGGGGCGCATTGCATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS TCA 72 bp | GGATCCTCTTCCTGTGTTTGGCCAGGTGGTATGCAGTaGAGCAGCCCTGGATCCCCGCCCCAATCACAATGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSCVWPGGMQ*SSPGSPPQSQW Trigger: CCATTGTGATTGGGGCGGGGATCCAGGGCTGCTTCACTGCATACCACCTGGCCAAACACAGGAAGAGGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS CCA 72 bp | TGTGAAACTGGCTCCTGTGCACAGAAGGGAGGCTTCTaGCCAGAGGTCAAAGGTGGGCTTTGCCCAGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CETGSCAQKGGF*PEVKGGLCPGL Trigger: CAAGCCTGGGCAAAGCCCACCTTTGACCTCTGGCCAGAAGCCTCCCTTCTGTGCACAGGAGCCAGTTTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000323372.9 ENST00000580241.5 ENST00000583215.5 |
||
| CDS CAA 90 bp | CTGTGCACAGAAGGGAGGCTTCTGGCCAGAGGTCAAAGGTGGGCTTaGCCCAGGCTTGGGAAACGGCTGATTCGAAAAGGTGCCAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LCTEGRLLARGQRWA*PRLGKRLIRKGAKS Trigger: TGACTTGGCACCTTTTCGAATCAGCCGTTTCCCAAGCCTGGGCAAAGCCCACCTTTGACCTCTGGCCAGAAGCCTCCCTTCTGTGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000323372.9 ENST00000580241.5 ENST00000583215.5 |
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| CDS TCA 72 bp | TCACAATGGCGTCCCAGAGATCTTTCTGAGCCGCCATaGTGCCACTCAGCCCCACAGCCACAGAGCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SQWRPRDLSEPP*CHSAPQPQSLK Trigger: TTTGAGGCTCTGTGGCTGTGGGGCTGAGTGGCATCATGGCGGCTCAGAAAGATCTCTGGGACGCCATTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS GCA 72 bp | ATCAGACCTATCGCGATTCTTGCTCCCAGGATGCAATaGGCCCCCGTTCGCCCTTTAGACCCTTTGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IRPIAILAPRMQ*APVRPLDPLAL Trigger: CAACGCCAAAGGGTCTAAAGGGCGAACGGGGGCGCATTGCATCCTGGGAGCAAGAATCGCGATAGGTCTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578748.6 |
||
| CDS CAA 72 bp | AGAGGCATCTCAATGCCCAGGGGACGGAGGAGCTGGTaGGTCCAAGGACCTGCTGTGATGACCAAGCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RGISMPRGRRSW*VQGPAVMTKLL Trigger: TAAGAGCTTGGTCATCACAGCAGGTCCTTGGACCAACCAGCTCCTCCGTCCCCTGGGCATTGAGATGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000466889.5 ENST00000469082.1 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS TCA 72 bp | CCTGTCCTCCTGGCAAAGAGGAGGATTGTGCGCTTCTaGGAGTCTCCTACCCAAGGATCCCTCTCCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PVLLAKRRIVRF*ESPTQGSLSLF Trigger: AAAGAGGGAGAGGGATCCTTGGGTAGGAGACTCTCAGAAGCGCACAATCCTCCTCTTTGCCAGGAGGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484308.5 |
||
| CDS CCA 72 bp | ACAGGCTGTTGGAAGGCCAGCACCTTGAGTCCTTTATaGAGGACCCCACGGGCTTCTTTCAACTTCAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: TGCWKASTLSPL*RTPRASFNFNP Trigger: GGGGTTGAAGTTGAAAGAAGCCCGTGGGGTCCTCCATAAAGGACTCAAGGTGCTGGCCTTCCAACAGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577182.5 |
||
| CDS CCA 72 bp | TCAGGCTGTTGGAAGGCCAGCACCTTGAGTCCTTTATaGAGGACCCCACGGGCTTCTTTCAACTTCAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGCWKASTLSPL*RTPRASFNFNP Trigger: GGGGTTGAAGTTGAAAGAAGCCCGTGGGGTCCTCCATAAAGGACTCAAGGTGCTGGCCTTCCAACAGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583215.5 |
||
| CDS CAA 72 bp | GGTCCAAGGACCTGCTGTGATGACCAAGCTCTTAGCTaGGTAGCTCCTGGAGGTGGTTTTCACCGTGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPRTCCDDQALS*VAPGGGFHRDQ Trigger: CTGGTCACGGTGAAAACCACCTCCAGGAGCTACCAAGCTAAGAGCTTGGTCATCACAGCAGGTCCTTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000466889.5 ENST00000469082.1 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
||
| CDS CAA 72 bp | CCGTCCAAATTCCTGTCCTCCTGGCAAAGAGGAGGATaGTGCGCTTCTGAGAGTCTCCTACCCAAGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSKFLSSWQRGG*CASESLLPKDP Trigger: GGGATCCTTGGGTAGGAGACTCTCAGAAGCGCACAATCCTCCTCTTTGCCAGGAGGACAGGAATTTGGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484308.5 |
||
| CDS CAA 72 bp | GGGAGTTGGAGTCCGGGGTACGCAGGTAGCTGGGCGTaGTCAGGATTACAAACTCTCCACTTTAGGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSWSPGYAGSWA*SGLQTLHFRLP Trigger: AGGAAGCCTAAAGTGGAGAGTTTGTAATCCTGACAACGCCCAGCTACCTGCGTACCCCGGACTCCAACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578748.6 |
||
| CDS CAA 72 bp | TACAGTTCCCACAATCCATCAGACCTATCGCGATTCTaGCTCCCAGGATGCAATGCGCCCCCGTTCGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YSSHNPSDLSRF*LPGCNAPPFAL Trigger: AAGGGCGAACGGGGGCGCATTGCATCCTGGGAGCAAGAATCGCGATAGGTCTGATGGATTGTGGGAACTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578748.6 |
||
| CDS TCA 72 bp | AAGATTCCAGCTCAGGCTGTTGGAAGGCCAGCACCTTaGGTCCTTTATGGAGGACCCCACGGGCTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KIPAQAVGRPAP*VLYGGPHGLLS Trigger: TGAAAGAAGCCCGTGGGGTCCTCCATAAAGGACTCAAGGTGCTGGCCTTCCAACAGCCTGAGCTGGAATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583215.5 |
||
| CDS CCA 72 bp | TCCAGGTACGCCTTTCGGATTATCCGGCTTTGTCCATaGGAGCTTCCTCGGGAGTGTGGTAGAAAGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRYAFRIIRLCP*ELPRECGRKNC Trigger: GCAGTTCTTTCTACCACACTCCCGAGGAAGCTCCCATGGACAAAGCCGGATAATCCGAAAGGCGTACCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323372.9 |
||
| CDS CCA 72 bp | GTCCAGTTCCAAAGCCCGTCCAAATTCCTGTCCTCCTaGCAAAGAGGAGGATTGTGCGCTTCTGAGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VQFQSPSKFLSS*QRGGLCASESL Trigger: GAGACTCTCAGAAGCGCACAATCCTCCTCTTTGCCAGGAGGACAGGAATTTGGACGGGCTTTGGAACTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484308.5 |
||
| CDS CCA 72 bp | TCCAGGTACGCCTTTCGGATTATCCGGCTTTGTCCATaGGAGCTTCCTCGGGAGTGTGGTAGAAAGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRYAFRIIRLCP*ELPRECGRKNR Trigger: CCTGTTCTTTCTACCACACTCCCGAGGAAGCTCCCATGGACAAAGCCGGATAATCCGAAAGGCGTACCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577182.5 |
||
| CDS CCA 72 bp | CAAACTGGGAGTTGGAGTCCGGGGTACGCAGGTAGCTaGGCGTTGTCAGGATTACAAACTCTCCACTTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QTGSWSPGYAGS*ALSGLQTLHFR Trigger: CCTAAAGTGGAGAGTTTGTAATCCTGACAACGCCCAGCTACCTGCGTACCCCGGACTCCAACTCCCAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS CAA 72 bp | AATTCATACAGGATCTTCCCCACCACAGGGGCCAGCTaGAACCCGTGCCCAGAGAATCCAGCACCAATGACA | + |
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Preference number: 6 (lower is better) Translates to: NSYRIFPTTGAS*NPCPENPAPMT Trigger: TGTCATTGGTGCTGGATTCTCTGGGCACGGGTTCAAGCTGGCCCCTGTGGTGGGGAAGATCCTGTATGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS TCA 72 bp | TGGAGGACCCCACGGGCTTCTTTCAACTTCAACCCCTaGACCTTCAGCACCAGCTGGTGTGAAGAATCCAAT | + |
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Preference number: 6 (lower is better) Translates to: WRTPRASFNFNP*TFSTSWCEESN Trigger: ATTGGATTCTTCACACCAGCTGGTGCTGAAGGTTCAGGGGTTGAAGTTGAAAGAAGCCCGTGGGGTCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577182.5 ENST00000583215.5 |
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| CDS GCA 72 bp | TCCAAATTCCTGTCCTCCTGGCAAAGAGGAGGATTGTaGGCTTCTGAGAGTCTCCTACCCAAGGATCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SKFLSSWQRGGL*ASESLLPKDPS Trigger: AGAGGGATCCTTGGGTAGGAGACTCTCAGAAGCGCACAATCCTCCTCTTTGCCAGGAGGACAGGAATTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484308.5 |
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| CDS CCA 72 bp | TCCAGGTACGCCTTTCGGATTATCCGGCTTTGTCCATaGGAGCTTCCTCGGGAGTGTGGTAGAAAGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: SRYAFRIIRLCP*ELPRECGRKNS Trigger: TGAGTTCTTTCTACCACACTCCCGAGGAAGCTCCCATGGACAAAGCCGGATAATCCGAAAGGCGTACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469082.1 |
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| CDS CCA 72 bp | TCCAGGTACGCCTTTCGGATTATCCGGCTTTGTCCATaGGAGCTTCCTCGGGAGTGTGGTAGAAAGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: SRYAFRIIRLCP*ELPRECGRKNW Trigger: CCAATTCTTTCTACCACACTCCCGAGGAAGCTCCCATGGACAAAGCCGGATAATCCGAAAGGCGTACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000580241.5 ENST00000580383.5 ENST00000583215.5 |
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| CDS CCA 72 bp | TCCAGGTACGCCTTTCGGATTATCCGGCTTTGTCCATaGGAGCTTCCTCGGGAGTGTGGTAGAAAGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: SRYAFRIIRLCP*ELPRECGRKNC Trigger: ACAGTTCTTTCTACCACACTCCCGAGGAAGCTCCCATGGACAAAGCCGGATAATCCGAAAGGCGTACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS CAA 90 bp | TTGCAAACTGGGAGTTGGAGTCCGGGGTACGCAGGTAGCTGGGCGTaGTCAGGATTACAAACTCTCCACTTTAGGCTTCCTCTTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LQTGSWSPGYAGSWA*SGLQTLHFRLPLEE Trigger: CTCTTCAAGAGGAAGCCTAAAGTGGAGAGTTTGTAATCCTGACAACGCCCAGCTACCTGCGTACCCCGGACTCCAACTCCCAGTTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS TCA 72 bp | TCAATGACAGCAGGCTCGGGCTTCAGATCAGGTAAGTaGTCTCTGACAAAGCTGCTCAGGATCTGGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: SMTAGSGFRSGK*SLTKLLRIWTS Trigger: AGACGTCCAGATCCTGAGCAGCTTTGTCAGAGATCACTTACCTGATCTGAAGCCCGAGCCTGCTGTCATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS TCA 72 bp | GCTCATCAGGGGTATTCGTGTACATGCAGCTCTCAATaGCAGCAGGCTCGGGCTTCAGATCAGGTAAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: AHQGYSCTCSSQ*QQARASDQVSD Trigger: ATCACTTACCTGATCTGAAGCCCGAGCCTGCTGTCATTGAGAGCTGCATGTACACGAATACCCCTGATGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS GCA 72 bp | TCGAATTGCATCCTGCAGGGCTCTGAGGGCCTTATATaGATAGATAACTCCTCCGGAATTGTCCAAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SNCILQGSEGLI*IDNSSGIVQEP Trigger: GGGCTCTTGGACAATTCCGGAGGAGTTATCTATGCATATAAGGCCCTCAGAGCCCTGCAGGATGCAATTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000466889.5 ENST00000469082.1 ENST00000484308.5 ENST00000580241.5 ENST00000580383.5 ENST00000583215.5 |
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| CDS CAA 72 bp | CCAAGAGCCCCACTTCTCCCCTGGGCAACCGAATATTaGGGAAACGTTGCTTCAGTTCCTCAGATGAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: PRAPLLPWATEY*GNVASVPQMKD Trigger: GTCTTTCATCTGAGGAACTGAAGCAACGTTTCCCAAATATTCGGTTGCCCAGGGGAGAAGTGGGGCTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000466889.5 ENST00000469082.1 ENST00000484308.5 ENST00000577182.5 ENST00000580241.5 ENST00000580383.5 ENST00000583215.5 |
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| CDS CAA 90 bp | CGGAATTGTCCAAGAGCCCCACTTCTCCCCTGGGCAACCGAATATTaGGGAAACGTTGCTTCAGTTCCTCAGATGAAAGACACTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RNCPRAPLLPWATEY*GNVASVPQMKDTGV Trigger: AACACCAGTGTCTTTCATCTGAGGAACTGAAGCAACGTTTCCCAAATATTCGGTTGCCCAGGGGAGAAGTGGGGCTCTTGGACAATTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000466889.5 ENST00000469082.1 ENST00000484308.5 ENST00000577182.5 ENST00000580241.5 ENST00000580383.5 ENST00000583215.5 |
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| CDS TCA 72 bp | ATCCAACACCACACCTTGCTCCTTTCTGTTCATGCCTaGGGACTCCAAGGGCATGATAGCCCATATCCCATT | + |
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Preference number: 6 (lower is better) Translates to: IQHHTLLLSVHA*GLQGHDSPYPI Trigger: AATGGGATATGGGCTATCATGCCCTTGGAGTCCTCAGGCATGAACAGAAAGGAGCAAGGTGTGGTGTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS GCA 72 bp | ATGTTGTCATACTTTGGGTGGCGATCGAGAATGAACTaGTCATCAGGGGTATTCGTGTACATGCAGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: MLSYFGWRSRMN*SSGVFVYMQLS Trigger: TGAGAGCTGCATGTACACGAATACCCCTGATGAGCAGTTCATTCTCGATCGCCACCCAAAGTATGACAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS CCA 72 bp | AGAGAATCCAGCACCAATGACAATGTTGTCATACTTTaGGTGGCGATCGAGAATGAACTGCTCATCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RESSTNDNVVIL*VAIENELLIRG Trigger: ACCCCTGATGAGCAGTTCATTCTCGATCGCCACCCAAAGTATGACAACATTGTCATTGGTGCTGGATTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS CCA 72 bp | TTCTGTCTCAAATGGCTTTTCTCTTTACCAATATGGTaGCCTGGTCCAGCCACACCCGATGGTAGAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: FCLKWLFSLPIW*PGPATPDGRTK Trigger: TTTGGTTCTACCATCGGGTGTGGCTGGACCAGGCCACCATATTGGTAAAGAGAAAAGCCATTTGAGACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS CCA 72 bp | ATTTTCTGTCTCAAATGGCTTTTCTCTTTACCAATATaGTGGCCTGGTCCAGCCACACCCGATGGTAGAACC | + |
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Preference number: 6 (lower is better) Translates to: IFCLKWLFSLPI*WPGPATPDGRT Trigger: GGTTCTACCATCGGGTGTGGCTGGACCAGGCCACCATATTGGTAAAGAGAAAAGCCATTTGAGACAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578748.6 |
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| CDS GCA 72 bp | AGTTCCTCAGATGAAAGACACTGGTGTTCTACCCTCTaGCTCGACAGATTGGCCTGGATTGTCTTTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSDERHWCSTL*LDRLAWIVFNS Trigger: AGAATTAAAGACAATCCAGGCCAATCTGTCGAGGCAGAGGGTAGAACACCAGTGTCTTTCATCTGAGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000323372.9 ENST00000419875.2 ENST00000466889.5 ENST00000469082.1 ENST00000484308.5 ENST00000577182.5 ENST00000580241.5 ENST00000580383.5 ENST00000583215.5 |
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| CDS CCA 72 bp | AATCCAGCACCAATGACAATGTTGTCATACTTTGGGTaGCGATCGAGAATGAACTGCTCATCAGGGGTATTC | + |
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Preference number: 6 (lower is better) Translates to: NPAPMTMLSYFG*RSRMNCSSGVF Trigger: GAATACCCCTGATGAGCAGTTCATTCTCGATCGCCACCCAAAGTATGACAACATTGTCATTGGTGCTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000323372.9 ENST00000484308.5 ENST00000580241.5 ENST00000583215.5 |
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| CDS GCA 72 bp | GAAAAGGTGCCAAGTCATAAGATGGTGTTAATTTCATaGTTAATTCATACAGGATCTTCCCCACCACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: EKVPSHKMVLIS*LIHTGSSPPQG Trigger: CCCCTGTGGTGGGGAAGATCCTGTATGAATTAAGCATGAAATTAACACCATCTTATGACTTGGCACCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000323372.9 ENST00000580241.5 ENST00000583215.5 |
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| CDS GCA 72 bp | GAAGTTCTTTTGTTAGCTAGTCTTCAACCATCCTGCTaGAATCTCACCTCACTTAGATTCACAAAGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: EVLLLASLQPSC*NLTSLRFTKKQ Trigger: TTGCTTCTTTGTGAATCTAAGTGAGGTGAGATTGCAGCAGGATGGTTGAAGACTAGCTAACAAAAGAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466889.5 |
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