RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIP5K1C (Homo sapiens)

Ensembl gene IDs: ENSG00000186111

Ensembl transcript IDs: ENST00000335312.8, ENST00000537021.1, ENST00000539785.5, ENST00000587482.1, ENST00000589578.5, ENST00000636612.1, ENST00000637724.1, ENST00000679828.1, ENST00000679885.1

Found 1431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGCCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTaGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGG +
Preference number: 1 (lower is better)
Translates to: GARPSASVQGEDEVR*GGEAGISRALGLSG
Trigger: CCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGGCCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp CGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGCTaGCCTGGACGCGGTGCCGCCCGCCCGGGGCCACACCTGCTGCTC +
Preference number: 1 (lower is better)
Translates to: RRPGTGVPCHSAEGG*PGRGAARPGPHLLL
Trigger: GAGCAGCAGGTGTGGCCCCGGGCGGGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp GCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGCTGCCCTaGACGCGGTGCCGCCCGCCCGGGGCCACACCTGCTGCTCCGAGT +
Preference number: 1 (lower is better)
Translates to: AGHWCPVSLSGGRLP*TRCRPPGATPAAPS
Trigger: ACTCGGAGCAGCAGGTGTGGCCCCGGGCGGGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp TGGTGTCCCGTGTCACTCAGCGGAGGGAGGCTGCCCTGGACGCGGTaGCGCCCGCCCGGGGCCACACCTGCTGCTCCGAGTCACCCCACA +
Preference number: 1 (lower is better)
Translates to: WCPVSLSGGRLPWTR*RPPGATPAAPSHPT
Trigger: TGTGGGGTGACTCGGAGCAGCAGGTGTGGCCCCGGGCGGGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGAGTGACACGGGACACCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp GCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCACTCTGCTGACCTGTaGAACCTCCCCTGTGCAGCCAGCGGGGCCACGGGCAGCCAGGTC +
Preference number: 1 (lower is better)
Translates to: ALRFRARPCSHSADL*NLPCAASGATGSQV
Trigger: GACCTGGCTGCCCGTGGCCCCGCTGGCTGCACAGGGGAGGTTGCACAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAACCGCAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 90 bp CTGGCCTCCAACCAGCACCCTCTGAGCGCAGCGGGCCCAGGAAGCTaGCCCAGGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGC +
Preference number: 1 (lower is better)
Translates to: LASNQHPLSAAGPGS*PRAVWAESHHWERC
Trigger: GCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCCTGGGGCAGCTTCCTGGGCCCGCTGCGCTCAGAGGGTGCTGGTTGGAGGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp CGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGTGGGCTGTaGAGGAGGCCGACGGGACGTGAACAGCGGGTGGCGTGGCGTCAT +
Preference number: 1 (lower is better)
Translates to: RLLHSRGLPGAACGL*RRPTGREQRVAWRH
Trigger: ATGACGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 90 bp TGGGAGGTGGGCGTCAGGGCCCCACTGCGGCGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGCAGGGCGAGGGCTGTCCCCACAGTC +
Preference number: 1 (lower is better)
Translates to: WEVGVRAPLRREHSC*VAAVLGRARAVPTV
Trigger: GACTGTGGGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGCCCACCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp CCCACAGGCCGCTTCTCATCTGAGGTGCTCTGGGCGCCCTGCGCCTaGCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: PTGRFSSEVLWAPCA*RSRSCWSMLCTPSS
Trigger: GCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCTGTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR TCA 90 bp ACAGACCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTaGTGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGAGGG +
Preference number: 1 (lower is better)
Translates to: TDPLSTQGGPHVGLS*WMLGATRLAGSRGG
Trigger: CCCTCCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGGTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp AGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTaGTTTGGGTCTGCGCCCCGTTCTGGCTGTGCGGTGCTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: SHGGLGGGFVSRGHS*FGSAPRSGCAVLGR
Trigger: CCTGCCCAGCACCGCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 90 bp CGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTaGCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACT +
Preference number: 1 (lower is better)
Translates to: RLRGGWLPAGSVGRS*LEQPGKWSPPLGVT
Trigger: AGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 90 bp TTCTGGCCCACAGGCCGCTTCTCATCTGAGGTGCTCTGGGCGCCCTaGGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCC +
Preference number: 1 (lower is better)
Translates to: FWPTGRFSSEVLWAP*ACRSRSCWSMLCTP
Trigger: GGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCTGTGGGCCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR GCA 90 bp TGGAGTAGAGCGCCTTCTGGCCCACAGGCCGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCTGCCGCTCGCGCTCGTGCTGGTCGA +
Preference number: 1 (lower is better)
Translates to: WSRAPSGPQAASHLR*SGRPAPAARARAGR
Trigger: TCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCTGTGGGCCAGAAGGCGCTCTACTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 90 bp AGGTGGGCGTCAGGGCCCCACTGCGGCGGGAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGGCGAGGGCTGTCCCCACAGTCGATG +
Preference number: 1 (lower is better)
Translates to: RWASGPHCGGNIAAE*PQCLAGRGLSPQSM
Trigger: CATCGACTGTGGGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGCCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp CGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTaGGTCTGCGCCCCGTTCTGGCTGTGCGGTGCTGGGCAGGTCTCT +
Preference number: 1 (lower is better)
Translates to: RRPRRRLCLEGTLLL*VCAPFWLCGAGQVS
Trigger: AGAGACCTGCCCAGCACCGCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 90 bp ACACCTGCTGCTCCGAGTCACCCCACAGGCTCTTGGCGTCTCTGGTaGCAGGGCTCTGGGCAGGGCGACTCGAGGACTCCCTGGGAGGAC +
Preference number: 1 (lower is better)
Translates to: TPAAPSHPTGSWRLW*QGSGQGDSRTPWED
Trigger: GTCCTCCCAGGGAGTCCTCGAGTCGCCCTGCCCAGAGCCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTGACTCGGAGCAGCAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp AGTAGATGTCGGTGGCGGGCGCGTCCTCCTCGTCCGAGGCCTGGCTaGCAGGTGCGCCCTCCTCGTCTGAGGCCTGGCTGGCAGTTTCTA +
Preference number: 1 (lower is better)
Translates to: SRCRWRARPPRPRPG*QVRPPRLRPGWQFL
Trigger: TAGAAACTGCCAGCCAGGCCTCAGACGAGGAGGGCGCACCTGCCAGCCAGGCCTCGGACGAGGAGGACGCGCCCGCCACCGACATCTACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR TCA 90 bp AGGGACAGGGCGGGGGCTGATGGGTGGATGCCCGGTGCCAGCAGATaGGCACCAGGCTGTGAACTGAGGCCAAGGTCGCTTCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: RDRAGADGWMPGASR*APGCELRPRSLPRA
Trigger: AGCCCTGGGAAGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCATCTGCTGGCACCGGGCATCCACCCATCAGCCCCCGCCCTGTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp TCAGGGCCCCACTGCGGCGGGAACATAGCTGCTGAGTGGCCGCAGTaGTTGGCAGGGCGAGGGCTGTCCCCACAGTCGATGTTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: SGPHCGGNIAAEWPQ*LAGRGLSPQSMFRP
Trigger: TGGCCTGAACATCGACTGTGGGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp CAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCACTaGTGTCCCGTGTCACTCAGCGGAGGGAGGCTGCCCTGGACGCGG +
Preference number: 1 (lower is better)
Translates to: QRFAHFSCKGASAGH*CPVSLSGGRLPWTR
Trigger: CCGCGTCCAGGGCAGCCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp CCCAGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTaGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGA +
Preference number: 1 (lower is better)
Translates to: PRGAEASAPPSVRWV*RDHLLPVSMALRFR
Trigger: TCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 90 bp CCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTaGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGA +
Preference number: 1 (lower is better)
Translates to: PAGSVGRSCLEQPGK*SPPLGVTPQCLAHR
Trigger: TCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR TCA 90 bp CCTTCCGGGCGCAGCGTGTGGGCTGTGCAGGAGGCCGACGGGACGTaGACAGCGGGTGGCGTGGCGTCATACGGAGGTTGTAACAGACAA +
Preference number: 1 (lower is better)
Translates to: PSGRSVWAVQEADGT*TAGGVASYGGCNRQ
Trigger: TTGTCTGTTACAACCTCCGTATGACGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGCGCCCGGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 90 bp GCAGTCGGCGATGGCGGGGAGAGTAAATCCAGTACCTCCCATCCGTaGACTGGACGGGGCGGGCCGGGTGGGCCGGAGGAGGAAGGAAAA +
Preference number: 1 (lower is better)
Translates to: AVGDGGESKSSTSHP*TGRGGPGGPEEEGK
Trigger: TTTTCCTTCCTCCTCCGGCCCACCCGGCCCGCCCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCCCGCCATCGCCGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR GCA 90 bp CAGGGCGAGGGCTGTCCCCACAGTCGATGTTCAGGCCAGATGTCCTaGACTGAGGCCCCCAAACCCAAGCTGAGGGCAGGAGGGTCCGCT +
Preference number: 1 (lower is better)
Translates to: QGEGCPHSRCSGQMS*TEAPKPKLRAGGSA
Trigger: AGCGGACCCTCCTGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCGACTGTGGGGACAGCCCTCGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp GTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGAGGTaGTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCG +
Preference number: 1 (lower is better)
Translates to: VSTSWGHSTVPGTQR*SERFADGRGVTAAS
Trigger: CGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 90 bp TGGTCTCCTGTGGCCCAAGGCCCGGCCTCCCGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTG +
Preference number: 1 (lower is better)
Translates to: WSPVAQGPASRSVLP*RKRLRCLGPPCQLL
Trigger: CAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCGGGCCTTGGGCCACAGGAGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 90 bp CGAGGGCTGTCCCCACAGTCGATGTTCAGGCCAGATGTCCTGCACTaGGGCCCCCAAACCCAAGCTGAGGGCAGGAGGGTCCGCTTCCCA +
Preference number: 1 (lower is better)
Translates to: RGLSPQSMFRPDVLH*GPQTQAEGRRVRFP
Trigger: TGGGAAGCGGACCCTCCTGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCGACTGTGGGGACAGCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 90 bp TTGCTGAGTGGCCTACGTTGGAAGAGAAGGACAAGTCCCCAGCCCTaGGCTCCGCCAGCGTGGGTGGCAGCCTGGGGAAGAGGAGGCCTG +
Preference number: 1 (lower is better)
Translates to: LLSGLRWKRRTSPQP*APPAWVAAWGRGGL
Trigger: CAGGCCTCCTCTTCCCCAGGCTGCCACCCACGCTGGCGGAGCTCAGGGCTGGGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 90 bp TCCCTGGGAGGACTGGTGTGGCCTCTGGGGGTTGGGCCTTTGAGATaGCAATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCC +
Preference number: 1 (lower is better)
Translates to: SLGGLVWPLGVGPLR*QCPCPCWPSRSQTP
Trigger: GGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp GGCCCGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTaGCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTTGGAAG +
Preference number: 1 (lower is better)
Translates to: GPASRSVLPWRKRLR*LGPPCQLLSGLRWK
Trigger: CTTCCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp GAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTaGCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTGATGGGCGGG +
Preference number: 1 (lower is better)
Translates to: EQPGKWSPPLGVTPQ*LAHRGARRGLLMGG
Trigger: CCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 90 bp GCGACTCGAGGACTCCCTGGGAGGACTGGTGTGGCCTCTGGGGGTTaGGCCTTTGAGATGACAATGCCCCTGTCCCTGCTGGCCATCCAG +
Preference number: 1 (lower is better)
Translates to: ATRGLPGRTGVASGG*AFEMTMPLSLLAIQ
Trigger: CTGGATGGCCAGCAGGGACAGGGGCATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAGGGAGTCCTCGAGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp GTGCACCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTaGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTG +
Preference number: 1 (lower is better)
Translates to: VHLVMVLPYGAPGST*DRMTFPVTHAAQRL
Trigger: CAGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR TCA 90 bp TGTGAACTGAGGCCAAGGTCGCTTCCCAGGGCTGGACAGACCCTCTaGGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGC +
Preference number: 1 (lower is better)
Translates to: CELRPRSLPRAGQTL*ARREDPTWACPDGC
Trigger: GCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGGTCTGTCCAGCCCTGGGAAGCGACCTTGGCCTCAGTTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp ACAATCTCCACGCTGCACGCAGGCTCCACCTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGTGGCTCCTCCTGCGGCCTGCCATCC +
Preference number: 1 (lower is better)
Translates to: TISTLHAGSTCTVIC*RSSSAGGSSCGLPS
Trigger: GGATGGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR GCA 90 bp ACCACAATCTCCACGCTGCACGCAGGCTCCACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCGGGTGGCTCCTCCTGCGGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: TTISTLHAGSTCTVI*CRSSSAGGSSCGLP
Trigger: TGGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 90 bp CAGAGTCGTGGCAATGGAGGCTGTAGTGGCTTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTCGGGCCGGCCTTCGTCCTCCAGCGT +
Preference number: 1 (lower is better)
Translates to: QSRGNGGCSGFFERR*RAGQEVGPAFVLQR
Trigger: ACGCTGGAGGACGAAGGCCGGCCCGACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAAGCCACTACAGCCTCCATTGCCACGACTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 90 bp TGTGGGCTGTGCAGGAGGCCGACGGGACGTGAACAGCGGGTGGCGTaGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: CGLCRRPTGREQRVA*RHTEVVTDKTQSPA
Trigger: GGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTCCTGCACAGCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp ATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTaGCTGACCTCAATTGCAGCCGTGATTTACCCAAAGCCCTTCTGG +
Preference number: 1 (lower is better)
Translates to: IPSDACSPAPGPGPA*LTSIAAVIYPKPFW
Trigger: CCAGAAGGGCTTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR GCA 90 bp GGCGTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTaGCTGGGAGGTTCTCCGGCCGTCTCAGACCCCACACCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: GVASYGGCNRQNTEP*LGGSPAVSDPTPGS
Trigger: AGAGCCTGGTGTGGGGTCTGAGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp TCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGATCCTCTTCCGCGGGTGGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SSLGTTISTLHAGST*TVICCRSSSAGGSS
Trigger: GGAGGAGCCACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 90 bp GACACTCCTGCTTTGGGTCTGCGCCCCGTTCTGGCTGTGCGGTGCTaGGCAGGTCTCTTAGGCTCTCTGGGCCCCTTGCTTATTGGTCAT +
Preference number: 1 (lower is better)
Translates to: DTPALGLRPVLAVRC*AGLLGSLGPLLIGH
Trigger: ATGACCAATAAGCAAGGGGCCCAGAGAGCCTAAGAGACCTGCCCAGCACCGCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR TCA 90 bp TCTCTGGGCCCCTTGCTTATTGGTCATAATGACAACAGCAGGCCCTaGGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGG +
Preference number: 1 (lower is better)
Translates to: SLGPLLIGHNDNSRP*GSHSYVGPMWRPRG
Trigger: CCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCATTATGACCAATAAGCAAGGGGCCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 90 bp TGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTaGGAGGTTCTCCGGCCGTCTCAGACCCCACACCAGGCTCTGCCA +
Preference number: 1 (lower is better)
Translates to: WRHTEVVTDKTQSPA*EVLRPSQTPHQALP
Trigger: TGGCAGAGCCTGGTGTGGGGTCTGAGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp GTGGGCGAGGAACCTGGGATGCAAACCAGTGTTTGGGGCCAGGAGTaGCTGTATGGTTTCAGAGGCGCCCACCACTCTGGGTTTGAGGGA +
Preference number: 1 (lower is better)
Translates to: VGEEPGMQTSVWGQE*LYGFRGAHHSGFEG
Trigger: TCCCTCAAACCCAGAGTGGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCATCCCAGGTTCCTCGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 90 bp CTCAATTGCAGCCGTGATTTACCCAAAGCCCTTCTGGAAAACAACTaGCGTCAGACACTGAGCTTCCGGCCGGGGACCTGCGGCTCCCTG +
Preference number: 1 (lower is better)
Translates to: LNCSRDLPKALLENN*RQTLSFRPGTCGSL
Trigger: CAGGGAGCCGCAGGTCCCCGGCCGGAAGCTCAGTGTCTGACGTCAGTTGTTTTCCAGAAGGGCTTTGGGTAAATCACGGCTGCAATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR TCA 90 bp CGACGTCTCCGAGGGGGACCGCTCAGGAATGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGAGGCTGTAGTGGCTTCTTCGAAAGA +
Preference number: 1 (lower is better)
Translates to: RRLRGGPLRNGEGCG*QSRGNGGCSGFFER
Trigger: TCTTTCGAAGAAGCCACTACAGCCTCCATTGCCACGACTCTGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCCCCTCGGAGACGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR GCA 90 bp TCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTACGTTGGAAGAGAAGGACAAGTCCC +
Preference number: 1 (lower is better)
Translates to: SVLPWRKRLRCLGPP*QLLSGLRWKRRTSP
Trigger: GGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp ACGTGTCGGGATGGCGTAGGGGGACAGAGCCTGGCAGGAGACACATaGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTC +
Preference number: 1 (lower is better)
Translates to: TCRDGVGGQSLAGDT*KFPPCQSQSKRLLV
Trigger: GACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCTCTGTCCCCCTACGCCATCCCGACACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 90 bp ATTTGGACACTGCCCACGTTCTCAGTGGACAGCAGCCATCAGAGGTaGCCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAG +
Preference number: 1 (lower is better)
Translates to: IWTLPTFSVDSSHQR*PRRGSGHWSPRYLQ
Trigger: CTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGTCCACTGAGAACGTGGGCAGTGTCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp AGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTaGAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGC +
Preference number: 1 (lower is better)
Translates to: RMEMKWYPQRFAHFS*KGASAGHWCPVSLS
Trigger: GCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 90 bp GTTCTCAGTGGACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTaGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGA +
Preference number: 1 (lower is better)
Translates to: VLSGQQPSEVTQEGK*ALVTKVFTDFYHGG
Trigger: TCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGTCCACTGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTaGACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCC +
Preference number: 1 (lower is better)
Translates to: WRQHKNGNEMVSTEV*TFLLQRRVGRALVS
Trigger: GGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AGGGCAGGAGGTCGGGCCGGCCTTCGTCCTCCAGCGTGGGGTAGCTGCGGGCCCGGCCGTCGGCATCCGTaGAGGGGGAGGACGAGGTCC +
Preference number: 2 (lower is better)
Translates to: RAGGRAGLRPPAWGSCGPGRRHP*RGRTRS
Trigger: GGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC...GGGCCCGCAGCTACCCCACGCTGGAGGACGAAGGCCGGCCCGACCTCCTGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR TCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCACGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: PELWASAGWAAPSGAAGAREHSC*VAAVLG
Trigger: GCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCG...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCGGACCTGCGGCTCCCTaGTGCCCGAGGGGCACTGCC +
Preference number: 2 (lower is better)
Translates to: TISSPSPWPCGSEPGPAAGPAAP*CPRGTA
Trigger: GGCAGTGCCCCTCGGGCAGCAGGGAGCCGCAGGTCC...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR CCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 2 (lower is better)
Translates to: GGEAGISRALGLSGVGSASGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGCCCTCTGCAGGCCGATaGGGCCCCCGGGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRPSAGR*GPRGSG
Trigger: ACCTGAGCCCCGGGGGCCCCATCGGCCTGCAGAGGG...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAACCGTGTCCCCATCGTaGACGAGGGCCTTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PELWASAGWAAPSGAAGATVSPS*TRAFQV
Trigger: CACCTGGAAGGCCCTCGTCCACGATGGGGACACGGT...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCATCAGGCCAGATGTCCTaGACTGAGGCCCCCAAACCC +
Preference number: 2 (lower is better)
Translates to: PELWASAGWAAPSGAAGASGQMS*TEAPKP
Trigger: GGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGA...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGTCAGCGGAGGGAGGCTaGCCTGGACGCGGTGCCGCC +
Preference number: 2 (lower is better)
Translates to: SPAKARRPGTGVPCHSAESAEGG*PGRGAA
Trigger: GGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGA...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGAGGACGAGGTCCGGTaGGGCGGCGAGGCGGGCATC +
Preference number: 2 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGEDEVR*GGEAGI
Trigger: GATGCCCGCCTCGCCGCCCCACCGGACCTCGTCCTC...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCGGACAGGGCGGGGGCTaGTGGGTGGATGCCCGGTGC +
Preference number: 2 (lower is better)
Translates to: RPPALSCHGENVSVAWALGQGGG*WVDARC
Trigger: GCACCGGGCATCCACCCATCAGCCCCCGCCCTGTCC...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAAGAAAACGTCTCCGTTaGCTGGGCCCTCCATGCCAG +
Preference number: 2 (lower is better)
Translates to: PELWASAGWAAPSGAAGARKRLR*LGPPCQ
Trigger: CTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AGCGGGGTGGGTCCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCAGCGTGTGGGCTGTaGAGGAGGCCGACGGGACGT +
Preference number: 2 (lower is better)
Translates to: SGVGPAASLAGDLRETEFAACGL*RRPTGR
Trigger: ACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGC...GAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGGACCCACCCCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp CCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTTCCGGCCGGGGACCTaGGGCTCCCTGCTGCCCGAG +
Preference number: 2 (lower is better)
Translates to: PEDLTATWGPCGVPGGPPFRPGT*GSLLPE
Trigger: CTCGGGCAGCAGGGAGCCGCAGGTCCCCGGCCGGAA...AGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR GCA 90 bp AGGGCAGGAGGTCGGGCCGGCCTTCGTCCTCCAGCGTGGGGTAGCTGCGGGCCCTGCTGGTCGATGTTGTaGACGCCCAGCAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RAGGRAGLRPPAWGSCGPCWSML*TPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCA...GGGCCCGCAGCTACCCCACGCTGGAGGACGAAGGCCGGCCCGACCTCCTGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCCCTCTGCAGGCCGATaGGGCCCCCGGGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: RPPALSCHGENVSVAWALPSAGR*GPRGSG
Trigger: ACCTGAGCCCCGGGGGCCCCATCGGCCTGCAGAGGG...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCAGGCGGCCACCCCCGTaGTCGGGTGGGAGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVRRPPP*SGGRGG
Trigger: TCCGCCTCTCCCACCCGACCACGGGGGTGGCCGCCT...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR CCA 90 bp TCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGCAGAGAGGGGCTCGCTaGGGTCTGGCCGGGGTCCGA +
Preference number: 2 (lower is better)
Translates to: SERFADGRGVTAASAEALQRGAR*GLAGVR
Trigger: TCGGACCCCGGCCAGACCCCAGCGAGCCCCTCTCTG...CAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CAA 90 bp ACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTaGGGTCTGCGCCCCGTTCTGGCTGTGCGGTGCTGGGCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: TAASAEALSRGDTPA*GLRPVLAVRCWAGL
Trigger: GAGACCTGCCCAGCACCGCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR TCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGACAAGTCCCCAGCCCTaGGCTCCGCCAGCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGTSPQP*APPAWV
Trigger: CACCCACGCTGGCGGAGCTCAGGGCTGGGGACTTGT...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp TCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGAGTACCTCCCATCCGTaGACTGGACGGGGCGGGCCG +
Preference number: 2 (lower is better)
Translates to: SERFADGRGVTAASAEALSTSHP*TGRGGP
Trigger: CGGCCCGCCCCGTCCAGTTCACGGATGGGAGGTACT...CAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR GCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCAGCGTGTGGGCTGTaGAGGAGGCCGACGGGACGT +
Preference number: 2 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGAACGL*RRPTGR
Trigger: ACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGC...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCTGCCCGAGGGGCACTaGCCCTTCTCCCCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: VWRDHLLPVSMALRFRARLPEGH*PFSPGW
Trigger: CCACCCTGGGGAGAAGGGGCAGTGCCCCTCGGGCAG...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR GCA 90 bp TCGATGGCCTCCCCGCGCGCGGCGCCACCCTGGATGGACTCCATGGCCGTGGAGCCAGGGAGCAGCTTCTaGAGGAACTCGGCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SMASPRAAPPWMDSMAVEPGSSF*RNSASL
Trigger: CAAGGAGGCCGAGTTCCTGCAGAAGCTGCTCCCTGG...CTCCACGGCCATGGAGTCCATCCAGGGTGGCGCCGCGCGCGGGGAGGCCATCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGTGGGAGCCACGCGGCTaGCCGGTTCCCGAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGWEPRG*PVPEEG
Trigger: ACCCTCCTCGGGAACCGGCCAGCCGCGTGGCTCCCA...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGTGCCCCTGTCCCTGCTaGCCATCCAGGTCCCAGACA +
Preference number: 2 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVCPCPC*PSRSQT
Trigger: TGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCA...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCCAAGCAGAAGGTaGGGGGTGCCGGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: VTAASAEALSRGDTPALGLPSRR*GVPGQG
Trigger: CCCCTGCCCCGGCACCCCCCACCTTCTGCTTGGCAG...ACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR CCA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCATGCAGCCCAGCGCCTaGTCCGGGGCCAGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVMQPSA*SGASVA
Trigger: AGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCAT...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGGATGGTGCTGCCCTATaGAGCGCCCGGTTCGACGTG +
Preference number: 2 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLDGAAL*SARFDV
Trigger: CACGTCGAACCGGGCGCTCCATAGGGCAGCACCATC...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp GGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGCTCGCTGGGGTCTaGCCGGGGTCCGAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: GSVGRSCLEQPGKWSPPLGLAGV*PGSEAD
Trigger: GTCTGCTTCGGACCCCGGCCAGACCCCAGCGAGCCC...AAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR TCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGCACGTGGGCTTGTCCTaGTGGATGCTGGGAGCCACG +
Preference number: 2 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRHVGLS*WMLGAT
Trigger: CGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTG...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGGATGGAGGCAGAGTTaGTCGGGACCCCAGCCGTCC +
Preference number: 2 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGGWRQS*SGPQPS
Trigger: GGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCC...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCGCGTCAGGGCCCCACTaGGGCGGGAACATAGCTGCT +
Preference number: 2 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERASGPH*GGNIAA
Trigger: AGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGC...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGGCGTCGGCCGGGCACTaGTGTCCCGTGTCACTCAGC +
Preference number: 2 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGASAGH*CPVSLS
Trigger: GCTGAGTGACACGGGACACCAGTGCCCGGCCGACGC...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCTGGGGGACAGCGGGGTaGGTCCAGCAGCCTCCCTCG +
Preference number: 2 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCWGTAG*VQQPPS
Trigger: CGAGGGAGGCTGCTGGACCCACCCCGCTGTCCCCCA...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGCTCCCATCCGTGAACTaGACGGGGCGGGCCGGGTGG +
Preference number: 2 (lower is better)
Translates to: RISQLRGAHVASQGDLLELPSVN*TGRAGW
Trigger: CCACCCGGCCCGCCCCGTCCAGTTCACGGATGGGAG...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR CCA 90 bp TCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCGTCCGAAGCAGACCCTaGGCCTCAGCTGTGCACCTG +
Preference number: 2 (lower is better)
Translates to: SRWLRGTELPRAAGEVVSVRSRP*ASAVHL
Trigger: CAGGTGCACAGCTGAGGCCCAGGGTCTGCTTCGGAC...GGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp GGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTTCCTCCCCGTCTCCATaGCCCTGCGGTTCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: GPEDLTATWGPCGVPGGPSSPSP*PCGSEP
Trigger: GGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGA...AGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCCGCCGCGCCCCTTCTTaGAGGGCGAGGACTTCAGGG +
Preference number: 2 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSRRAPS*RARTSG
Trigger: CCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCG...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CAA 90 bp GGGCCCCACTGCGGCGGGAACATAGCTGCTGAGTGGCCGCAGTGCTaGGCAGGGCGAGGGCTGTCCCCACAGTCGATGTTCAGGCCAGAT +
Preference number: 2 (lower is better)
Translates to: GPHCGGNIAAEWPQC*AGRGLSPQSMFRPD
Trigger: ATCTGGCCTGAACATCGACTGTGGGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCGCCGCAGTGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCAGCAGCCATCAGAGGTaGCCCAGGAGGGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERSSHQR*PRRGSG
Trigger: CCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCT...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACACTGACGTCAGACACTaGGCTTCCGGCCGGGGACCT +
Preference number: 2 (lower is better)
Translates to: QALRISQLRGAHVASQGDTDVRH*ASGRGP
Trigger: AGGTCCCCGGCCGGAAGCTCAGTGTCTGACGTCAGT...GTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR TCA 90 bp TCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGCAGCGCCTCCATCTGTaGGGTGGGTGTGGAGAGACC +
Preference number: 2 (lower is better)
Translates to: SERFADGRGVTAASAEALQRLHL*GGCGET
Trigger: GGTCTCTCCACACCCACCTCACAGATGGAGGCGCTG...CAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCGTGCAACCTCCCCTGTaGAGCCAGCGGGGCCACGGG +
Preference number: 2 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMAVQPPL*SQRGHG
Trigger: CCCGTGGCCCCGCTGGCTGCACAGGGGAGGTTGCAC...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCCGACGCGGATGTTCTTaGCCCCCGACTGCACGCAGT +
Preference number: 2 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERRRGCS*PPTARS
Trigger: ACTGCGTGCAGTCGGGGGGCAAGAACATCCGCGTCG...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCTGGGGAAGGGCAGGGTaGGTGACTCTGCCGAGCTCT +
Preference number: 2 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFWGRAG*VTLPSS
Trigger: AGAGCTCGGCAGAGTCACCCACCCTGCCCTTCCCCA...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGACACAGAGCCCTGCCTaGGAGGTTCTCCGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGTQSPA*EVLRPS
Trigger: AGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGT...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGGAACAGCGGGTGGCGTaGCGTCATACGGAGGTTGTA +
Preference number: 2 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVEQRVA*RHTEVV
Trigger: TACAACCTCCGTATGACGCCACGCCACCCGCTGTTC...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCGACGTGAACAGCGGGTaGCGTGGCGTCATACGGAGG +
Preference number: 2 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERDVNSG*RGVIRR
Trigger: CCTCCGTATGACGCCACGCCACCCGCTGTTCACGTC...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AGCGGGGTGGGTCCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCCCTCGGCACAGTCAGTaGAGCACGTCAGCCTCGGTT +
Preference number: 2 (lower is better)
Translates to: SGVGPAASLAGDLRETEFPRHSQ*STSASV
Trigger: AACCGAGGCTGACGTGCTCCACTGACTGTGCCGAGG...GAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGGACCCACCCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCGCGCCCGGTTCGACGTaGGACCGAATGACATTCCCA +
Preference number: 2 (lower is better)
Translates to: SRWLRGTELPRAAGEVVSAPGST*DRMTFP
Trigger: TGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGC...GGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCTGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTA +
Preference number: 2 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERCLGPP*QLLSGL
Trigger: TAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCA...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AGCGGGGTGGGTCCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCCCTCCCGCTCTGTCCTaGCATGGAGAAAACGTCTCC +
Preference number: 2 (lower is better)
Translates to: SGVGPAASLAGDLRETEFPPALS*HGENVS
Trigger: GGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGG...GAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGGACCCACCCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTTCAGAGCCCGGCCCTaGAGCCACTCTGCTGACCTG +
Preference number: 2 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVFRARP*SHSADL
Trigger: CAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAA...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCT +
Preference number: 2 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSASHLR*SGRPAP
Trigger: AGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCAGCTGTGGTGGGTCTaGATTGGAGGCGCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFQLWWV*IGGARG
Trigger: ACCTCTGGCGCCTCCAATCCAGACCCACCACAGCTG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CTAGCAAGGCTCCGCCGCGCCCCTTCTTGGAGGGCGAGGACTTCAGGGAGGAGTCTGGCCCTCCAGCTGTaGTGGGTCTGGATTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LARLRRAPSWRARTSGRSLALQL*WVWIGG
Trigger: GCCTCCAATCCAGACCCACCACAGCTGGAGGGCCAG...ACTCCTCCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCGGAGCCTTGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGCTGAGTCCCACCACTaGGAGCGCTGCCCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSAESHH*ERCPLG
Trigger: TCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCACCCTCTCAGGGGTCCTaGGGAAGGGCAGGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: SALWIVTHQTTGRRNGVAPSQGS*GRAGWV
Trigger: CACCCACCCTGCCCTTCCCCAGGACCCCTGAGAGGG...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGACACAGAGCCCTGCCTaGGAGGTTCTCCGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWTQSPA*EVLRPS
Trigger: AGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGT...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCTGGGGACCTCGGGGATaGGTCCGGCTTCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCWGPRG*VRLLHS
Trigger: GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCA...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCCTGGGAGGACTGGTGTaGCCTCTGGGGGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCLGGLV*PLGVGP
Trigger: AGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAG...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCGACTCGAGGACTCCCTaGGAGGACTGGTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: RPPALSCHGENVSVAWALDSRTP*EDWCGL
Trigger: GAGGCCACACCAGTCCTCCCAGGGAGTCCTCGAGTC...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTGCGCCCGGTTCGACGTaGGACCGAATGACATTCCCA +
Preference number: 2 (lower is better)
Translates to: GPEDLTATWGPCGVPGGPAPGST*DRMTFP
Trigger: TGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGC...AGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGGATGGTGCTGCCCTATaGAGCGCCCGGTTCGACGTG +
Preference number: 2 (lower is better)
Translates to: VWRDHLLPVSMALRFRARDGAAL*SARFDV
Trigger: CACGTCGAACCGGGCGCTCCATAGGGCAGCACCATC...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp TCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGCTGGCTGTGCGGTGCTaGGCAGGTCTCTTAGGCTCT +
Preference number: 2 (lower is better)
Translates to: SERFADGRGVTAASAEALLAVRC*AGLLGS
Trigger: AGAGCCTAAGAGACCTGCCCAGCACCGCACAGCCAG...CAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCTGGATGGACTCCATaGCCGTGGAGTAGAGCGCCT +
Preference number: 2 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFPGWTP*PWSRAP
Trigger: AGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CAA 90 bp GGCCCCAGCGGTTTCACAGCTAGCAAGGCTCCGCCGCGCCCCTTCTaGGAGGGCGAGGACTTCAGGGAGGAGTTCTTCCGAAAGACCGTG +
Preference number: 2 (lower is better)
Translates to: GPSGFTASKAPPRPF*EGEDFREEFFRKTV
Trigger: CACGGTCTTTCGGAAGAACTCCTCCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCGGAGCCTTGCTAGCTGTGAAACCGCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR TCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCACCTGACCTTCCGCCCTaGGCTGGTCTCCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAPDLPP*AGLLWP
Trigger: GGGCCACAGGAGACCAGCTCAGGGCGGAAGGTCAGG...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp TCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGCAGCTGTGCACCTGGTaGTGGTGCTGCCCTATGGAG +
Preference number: 2 (lower is better)
Translates to: SVGRSCLEQPGKWSPPLGQLCTW*WCCPME
Trigger: CTCCATAGGGCAGCACCATCACCAGGTGCACAGCTG...CCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR TCA 90 bp GCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGCAGCGCCTCCATCTGTaGGGTGGGTGTGGAGAGACC +
Preference number: 2 (lower is better)
Translates to: AGEVVSTSWGHSTVPGTQQRLHL*GGCGET
Trigger: GGTCTCTCCACACCCACCTCACAGATGGAGGCGCTG...CTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCGGCCGTCGGCATCCGTaGAGGGGGAGGACGAGGTCC +
Preference number: 2 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTGRRHP*RGRTRS
Trigger: GGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATCAAAACACAGAGCCCTaGCTGGGAGGTTCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDQNTEP*LGGSPA
Trigger: GGCCGGAGAACCTCCCAGGCAGGGCTCTGTGTTTTG...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATGCAGAGTGGAGGGGCTaGTCTCGTGGAGTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDAEWRG*SRGVCV
Trigger: GACACACACTCCACGAGAGCAGCCCCTCCACTCTGC...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCCCGTCTCCATGGCCCTaGGGTTCAGAGCCCGGCCCT +
Preference number: 2 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLPSPWP*GSEPGP
Trigger: AGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGG...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCGTTCTGGCTGTGCGGTaGTGGGCAGGTCTCTTAGGC +
Preference number: 2 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVVLAVR*WAGLLG
Trigger: GCCTAAGAGACCTGCCCAGCACCGCACAGCCAGAAC...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp GGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGTTCTGGCTGTGCGGTaGTGGGCAGGTCTCTTAGGC +
Preference number: 2 (lower is better)
Translates to: GSHGGLGGGFVSRGHSCFVLAVR*WAGLLG
Trigger: GCCTAAGAGACCTGCCCAGCACCGCACAGCCAGAAC...AAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGGTCCGCTTCCCACGTaGATGGAGGCAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSGPLPT*MEAELL
Trigger: GAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGCTGAGTGGCCTACGTTaGAAGAGAAGGACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVLSGLR*KRRTSP
Trigger: GGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAG...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGCGCTGCCCTCTTaGAGGGTGATGAGTCGGAAA +
Preference number: 2 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEGALPS*RVMSRK
Trigger: TTTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCC...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTGTGGCGGGGAGCAGGTaGGGACAGCTGACTGCCAAG +
Preference number: 2 (lower is better)
Translates to: SRGLSASICEVGVERPSPVAGSR*GQLTAK
Trigger: CTTGGCAGTCAGCTGTCCCCACCTGCTCCCCGCCAC...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR CCA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTGGTCCGGGGCCAGCGTaGCTGACCTCAATTGCAGCC +
Preference number: 2 (lower is better)
Translates to: SRGLSASICEVGVERPSPGPGPA*LTSIAA
Trigger: GGCTGCAATTGAGGTCAGCCACGCTGGCCCCGGACC...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp CTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCTGACACGAGAGGGCTaGGTCCAGGGGCAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LPRAAGEVVSTSWGHSTVLTREG*VQGQRG
Trigger: CCCTCTCTGCCCCTGGACCCAGCCCTCTCGTGTCAG...CACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp GTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGGCTGTGCGGTGCTaGGCAGGTCTCTTAGGCTCT +
Preference number: 2 (lower is better)
Translates to: VTAASAEALSRGDTPALGLAVRC*AGLLGS
Trigger: AGAGCCTAAGAGACCTGCCCAGCACCGCACAGCCAG...ACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CAA 90 bp AGGCCCGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTaGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTTGGAA +
Preference number: 2 (lower is better)
Translates to: RPGLPLCPAMEKTSP*PGPSMPVAEWPTLE
Trigger: TTCCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGA +
Preference number: 2 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEGEGCG*QSRGNG
Trigger: TCCATTGCCACGACTCTGTCATCCACATCCCTCTCC...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp TATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCACCCAGGGTGGCCGGCTaGGGTCACTTACAGTCCCCG +
Preference number: 2 (lower is better)
Translates to: YGAPGSTWDRMTFPVTHAPRVAG*GHLQSP
Trigger: CGGGGACTGTAAGTGACCGCAGCCGGCCACCCTGGG...TGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR CCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAGGGGAAGAGGAGGCCTaGCCCTCCAGCTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVGEEEA*PSSCGG
Trigger: CCCACCACAGCTGGAGGGCCAGGCCTCCTCTTCCCC...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGGAGCGCTGCCCTCTTaGAGGGTGATGAGTCGGAAA +
Preference number: 2 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSGALPS*RVMSRK
Trigger: TTTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCACAGCCCATAGAACTTaGGCAGCAGCGTCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCTAHRT*AAASAG
Trigger: ACCCGCGGACGCTGCTGCCCAAGTTCTATGGGCTGT...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CAA 90 bp CCAGGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTaGGAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: PGQSGLSPTTGSAAL*EGDESETKSSLPSS
Trigger: CGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCTCCATGCCAGTTGCTaGGTGGCCTACGTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: RPPALSCHGENVSVAWALLHASC*VAYVGR
Trigger: TCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAG...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCCTCAATTGCAGCCGTaGTTTACCCAAAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLPQLQP*FTQSPS
Trigger: AGAAGGGCTTTGGGTAAATCACGGCTGCAATTGAGG...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR TCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCCTGCAGCCACTCTGCTaGCCTGTGCAACCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLLQPLC*PVQPPL
Trigger: CAGGGGAGGTTGCACAGGTCAGCAGAGTGGCTGCAG...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR GCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCCCTCCCGCTCTGTCCTaGCATGGAGAAAACGTCTCC +
Preference number: 2 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCPPALS*HGENVS
Trigger: GGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGG...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCTCTTGGCGTCTCTGGTaGCAGGGCTCTGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTSWRLW*QGSGQG
Trigger: GCCCTGCCCAGAGCCCTGGCACCAGAGACGCCAAGA...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCCCCTCGGGCATGTCCTaGATGAAGTCCAGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCPSGMS*MKSRSL
Trigger: CAAGGACCTGGACTTCATGCAGGACATGCCCGAGGG...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCGTCCAGACGACTGTGTaGGCCGCCTGTACCGCGGCT +
Preference number: 2 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTVQTTV*AACTAA
Trigger: AGCCGCGGTACAGGCGGCGCACACAGTCGTCTGGAC...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCNIAAE*PQCLAG
Trigger: CCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTT...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCTGAGTGGCCTACGTTaGAAGAGAAGGACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFLSGLR*KRRTSP
Trigger: GGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAAGTGTGTGTCCTCGCTaGGGACCTCGGGGATGGGTC +
Preference number: 2 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRASVCPR*GPRGWV
Trigger: GACCCATCCCCGAGGTCCCCAGCGAGGACACACACT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTGGGGACGTGTCGGGATaGCGTAGGGGGACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGGDVSG*RRGTEP
Trigger: AGGCTCTGTCCCCCTACGCCATCCCGACACGTCCCC...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGGGTGGGCGAGGAACCTaGGATGCAAACCAGTGTTTG +
Preference number: 2 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGGGRGT*DANQCL
Trigger: CAAACACTGGTTTGCATCCCAGGTTCCTCGCCCACC...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CAA 90 bp ACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATaGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTGCCGACC +
Preference number: 2 (lower is better)
Translates to: THVLPSLCQIRTQMR*AAREGGSHRGRLPT
Trigger: GGTCGGCAGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
3UTR CAA 90 bp GCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCACTCTGGGTTaGAGGGACACAGCACCCTCGTCTCGGCGCTTTGGATTGTCACGC +
Preference number: 2 (lower is better)
Translates to: ARSGCMVSEAPTTLG*RDTAPSSRRFGLSR
Trigger: GCGTGACAATCCAAAGCGCCGAGACGAGGGTGCTGTGTCCCTCAAACCCAGAGTGGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCCGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTREHSC*VAAVLG
Trigger: GCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCG...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTACGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVREHSC*VAAVLG
Trigger: GCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCG...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTCACGTGGGCTTGTCCTaGTGGATGCTGGGAGCCACG +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGHVGLS*WMLGAT
Trigger: CGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTG...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCAGCAGCCATCAGAGGTaGCCCAGGAGGGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTSSHQR*PRRGSG
Trigger: CCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCT...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTGGCGCCAGAGGTTTTTaGTCGAGGGGCACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGGARGF*SRGTWE
Trigger: CTCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCC...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTGCTTGTCCTGATGGATaGTGGGAGCCACGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGACPDG*WEPRGW
Trigger: CCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGC...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCCAATGCCCCTGTCCCTaGTGGCCATCCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTQCPCP*WPSRSQ
Trigger: CTGGGACCTGGATGGCCAGCAGGGACAGGGGCATTG...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTACAATGCCCCTGTCCCTaGTGGCCATCCAGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVQCPCP*WPSRSQ
Trigger: CTGGGACCTGGATGGCCAGCAGGGACAGGGGCATTG...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCGGGGCCACACCTGCTaGTCCGAGTCACCCCACAGG +
Preference number: 2 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRRGHTC*SESPHR
Trigger: CCTGTGGGGTGACTCGGAGCAGCAGGTGTGGCCCCG...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGCAGGAATTTGGACACTaGCCACGTTCTCAGTGGACA +
Preference number: 2 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEQEFGH*PRSQWT
Trigger: TGTCCACTGAGAACGTGGGCAGTGTCCAAATTCCTG...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAACCAGGCAGTCCCGCTaGAGCGTCTTGACCAGGGCG +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRATRQSR*SVLTRA
Trigger: CGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGT...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDCTVIC*RSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCA...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCCCTCTGCAGGCCGATaGGGCCCCCGGGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: EGDESETKSSLPSSETSHPSAGR*GPRGSG
Trigger: ACCTGAGCCCCGGGGGCCCCATCGGCCTGCAGAGGG...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCAAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SALWIVTHQTTGRRNGVANIAAE*PQCLAG
Trigger: CCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTT...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTGGGGAAGAGGAGGCCTaGCCCTCCAGCTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGGEEEA*PSSCGG
Trigger: CCCACCACAGCTGGAGGGCCAGGCCTCCTCTTCCCC...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTCTCCGCCAGCGTGGGTaGCAGCCTGGGGAAGAGGAG +
Preference number: 2 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPLRQRG*QPGEEE
Trigger: CTCCTCTTCCCCAGGCTGCCACCCACGCTGGCGGAG...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAACGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGC +
Preference number: 2 (lower is better)
Translates to: HPRLGALDCHAPDHGAEERSVLP*RKRLRC
Trigger: GCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCG...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACCCCTCTCAGGGGTCCTaGGGAAGGGCAGGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYPSQGS*GRAGWV
Trigger: CACCCACCCTGCCCTTCCCCAGGACCCCTGAGAGGG...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTGACGTGAACAGCGGGTaGCGTGGCGTCATACGGAGG +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGDVNSG*RGVIRR
Trigger: CCTCCGTATGACGCCACGCCACCCGCTGTTCACGTC...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAGACTCGAGGACTCCCTaGGAGGACTGGTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVDSRTP*EDWCGL
Trigger: GAGGCCACACCAGTCCTCCCAGGGAGTCCTCGAGTC...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTGGTGCCAGGGCTCTaGGCAGGGCGACTCGAGGAC +
Preference number: 2 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRLVPGL*AGRLED
Trigger: GTCCTCGAGTCGCCCTGCCCAGAGCCCTGGCACCAG...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGC +
Preference number: 2 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPSSEVL*APCACR
Trigger: GCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGA...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTCCCCGCAGGTCGTACTaGGCCTCCTCCCGCTCGCTA +
Preference number: 2 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPPRRSY*ASSRSL
Trigger: TAGCGAGCGGGAGGAGGCCCAGTACGACCTGCGGGG...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CAA 90 bp CTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTaGCTGAGTGGCCTACGTTGGAAGAGAAGGACAAGTCCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LPWRKRLRCLGPPCQ*LSGLRWKRRTSPQP
Trigger: GGGCTGGGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATTTGAACCACCGGAGATaGGGAGGAGGTGGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: PAASLAGDLRETEFAKYYLNHRR*GGGGRR
Trigger: GCGCCTGCCACCTCCTCCTCATCTCCGGTGGTTCAA...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAACTCGTCGTCGCTGGTaGCGTAGAAGAGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVTRRRW*RRRGSH
Trigger: GTGGCTCCCTCTTCTACGTCACCAGCGACGACGAGT...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAAGGTCGAACTTGAGGTaGATCTTGACCACGCGGGGC +
Preference number: 2 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRARSNLR*ILTTRG
Trigger: GCCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATGCTCCTCCTGCGGCCTaGCATCCTGTCCAGACGACT +
Preference number: 2 (lower is better)
Translates to: PAASLAGDLRETEFAKYYAPPAA*HPVQTT
Trigger: AGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGC...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 2 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRSGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTACGCTTCCCACGTGGATaGAGGCAGAGTTGCTCGGGA +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVRFPRG*RQSCSG
Trigger: TCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCG...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTCGCTTCCCACGTGGATaGAGGCAGAGTTGCTCGGGA +
Preference number: 2 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRRFPRG*RQSCSG
Trigger: TCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCG...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRANIAAE*PQCLAG
Trigger: CCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAAGTGTGTGTCCTCGCTaGGGACCTCGGGGATGGGTC +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRASVCPR*GPRGWV
Trigger: GACCCATCCCCGAGGTCCCCAGCGAGGACACACACT...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAGAGGGGCTGCTCTCGTaGAGTGTGTGTCCTCGCTGG +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAEGLLS*SVCPRW
Trigger: CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTC...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTCACCCCACAGGCTCTTaGCGTCTCTGGTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPHPTGS*RLWCQG
Trigger: GCCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTG...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGGAATGGAGAGGGATGTaGATGACAGAGTCGTGGCAA +
Preference number: 2 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGEWRGM*MTESWQ
Trigger: TTGCCACGACTCTGTCATCCACATCCCTCTCCATTC...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR TCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAATGAGCACCAGGCTGTaGACTGAGGCCAAGGTCGCT +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVMSTRL*TEAKVA
Trigger: AGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCAT...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGCAGCCATCAGAGGTaGCCCAGGAGGGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYSSHQR*PRRGSG
Trigger: CCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCT...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAACAGGAATTTGGACACTaGCCACGTTCTCAGTGGACA +
Preference number: 2 (lower is better)
Translates to: HPRLGALDCHAPDHGAEEQEFGH*PRSQWT
Trigger: TGTCCACTGAGAACGTGGGCAGTGTCCAAATTCCTG...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGCTCTCTGGGCCCCTTaGTTATTGGTCATAATGACA +
Preference number: 2 (lower is better)
Translates to: SVGRSCLEQPGKWSPPLGALWAP*LLVIMT
Trigger: TGTCATTATGACCAATAAGCAAGGGGCCCAGAGAGC...CCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRASGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGTGCTCGAGGGGCACCTaGGAGGTGGGCGTCAGGGCC +
Preference number: 2 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMCSRGT*EVGVRA
Trigger: GGCCCTGACGCCCACCTCCCAGGTGCCCCTCGAGCA...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTGACGTGAACAGCGGGTaGCGTGGCGTCATACGGAGG +
Preference number: 2 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPDVNSG*RGVIRR
Trigger: CCTCCGTATGACGCCACGCCACCCGCTGTTCACGTC...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATAGGGGAAGTGGGCATTaGTCACCAAGGTATTTACAG +
Preference number: 2 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDRGSGH*SPRYLQ
Trigger: CTGTAAATACCTTGGTGACCAATGCCCACTTCCCCT...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACGCGCGGCGCCACCCTaGATGGACTCCATGGCCGTG +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTRAAPP*MDSMAV
Trigger: CACGGCCATGGAGTCCATCCAGGGTGGCGCCGCGCG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR TCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACAGGGCAGTCTGGGCTaGGTCCCACCACTGGGAGCG +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTQGSLG*VPPLGA
Trigger: CGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCCTG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGGAGGCCGACGGGACGTaGACAGCGGGTGGCGTGGCG +
Preference number: 2 (lower is better)
Translates to: SETKSSLPSSETSHHLNKEADGT*TAGGVA
Trigger: CGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTC...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATATGAGCACCAGGCTGTaGACTGAGGCCAAGGTCGCT +
Preference number: 2 (lower is better)
Translates to: PAASLAGDLRETEFAKYYMSTRL*TEAKVA
Trigger: AGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCAT...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATGTGCTTCCGTCTCTGTaGCAAATAAGGACTCAAATG +
Preference number: 2 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDVLPSL*QIRTQM
Trigger: CATTTGAGTCCTTATTTGGCACAGAGACGGAAGCAC...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGCTGAGTGGCCGCAGTaGTTGGCAGGGCGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMAEWPQ*LAGRGL
Trigger: CAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGC...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATGCGTCAGGGCCCCACTaGGGCGGGAACATAGCTGCT +
Preference number: 2 (lower is better)
Translates to: EGDESETKSSLPSSETSHASGPH*GGNIAA
Trigger: AGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGC...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACTGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTA +
Preference number: 2 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYCLGPP*QLLSGL
Trigger: TAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCA...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAAGAAAACGTCTCCGTTaGCTGGGCCCTCCATGCCAG +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRARKRLR*LGPPCQ
Trigger: CTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGGTGGCTGACCTCAATTaGAGCCGTGATTTACCCAAA +
Preference number: 2 (lower is better)
Translates to: AGEVVSTSWGHSTVPGTQVADLN*SRDLPK
Trigger: TTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCAC...CTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR GCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCG +
Preference number: 2 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRATCTVI*CRSSSA
Trigger: CGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTACACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVHAGST*TVICCR
Trigger: TCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTG...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 2 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRSGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAGTGGTGGGTCTGGATTaGAGGCGCCAGAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVVVGLD*RRQRFL
Trigger: CAAAAACCTCTGGCGCCTCCAATCCAGACCCACCAC...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCAGCTGTGGTGGGTCTaGATTGGAGGCGCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRQLWWV*IGGARG
Trigger: ACCTCTGGCGCCTCCAATCCAGACCCACCACAGCTG...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAGAACAGCGGGTGGCGTaGCGTCATACGGAGGTTGTA +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAEQRVA*RHTEVV
Trigger: TACAACCTCCGTATGACGCCACGCCACCCGCTGTTC...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCTCTCCAAAAGGGCCTTaGAGACAACACAAGAATGGA +
Preference number: 2 (lower is better)
Translates to: RPPALSCHGENVSVAWALSPKGP*RQHKNG
Trigger: TCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGA...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTACCCAGGAGGGGAAGTaGGCATTGGTCACCAAGGTA +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGTQEGK*ALVTKV
Trigger: TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGT...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATGGAGTGGCATCCCTaGGGGGAGTTAAGACACACG +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGMEWHP*GELRHT
Trigger: CGTGTGTCTTAACTCCCCCCAGGGATGCCACTCCAT...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTTCTGGAAAACAACTaGCGTCAGACACTGAGCTTC +
Preference number: 2 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMALLENN*RQTLSF
Trigger: GAAGCTCAGTGTCTGACGTCAGTTGTTTTCCAGAAG...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR GCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAGCTGAGTGGCCGCAGTaGTTGGCAGGGCGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: DESETKSSLPSSETSHHLAEWPQ*LAGRGL
Trigger: CAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGC...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACCCTCCCGCTCTGTCCTaGCATGGAGAAAACGTCTCC +
Preference number: 2 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYPPALS*HGENVS
Trigger: GGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGG...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACTTTGCACATTTCTCCTaGAAAGGCGCGTCGGCCGGG +
Preference number: 2 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYFAHFS*KGASAG
Trigger: CCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAA...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGAAGACACACGAGGTTTaGAGTTTCATTTTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRKTHEV*SFILFQ
Trigger: CTGAAACAAAATGAAACTGCAAACCTCGTGTGTCTT...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCCTTCCGCCCTGAGCTaGTCTCCTGTGGCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGPSALS*SPVAQG
Trigger: GCCTTGGGCCACAGGAGACCAGCTCAGGGCGGAAGG...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACCTTCCGCCCTGAGCTaGTCTCCTGTGGCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTPSALS*SPVAQG
Trigger: GCCTTGGGCCACAGGAGACCAGCTCAGGGCGGAAGG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTCTGGCAGGAGACACATaGAAGTTTCCGCCTTGTCAG +
Preference number: 2 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGLAGDT*KFPPCQ
Trigger: CTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAG...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACCTCGTCTCGGCGCTTTaGATTGTCACGCACCAGACC +
Preference number: 2 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYLVSAL*IVTHQT
Trigger: GGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAG...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGGAGAGCTTGGGGATCTaGATTTTGACTAAACCGTGT +
Preference number: 2 (lower is better)
Translates to: AGEVVSTSWGHSTVPGTQESLGI*ILTKPC
Trigger: ACACGGTTTAGTCAAAATCCAGATCCCCAAGCTCTC...CTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCG +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTRSLGI*LAEKAA
Trigger: CGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR TCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACCCGGTGCCAGCAGATaGGCACCAGGCTGTGAACTG +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTPGASR*APGCEL
Trigger: CAGTTCACAGCCTGGTGCTCATCTGCTGGCACCGGG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACAGTGGCCGCAGTGCTTaGCAGGGCGAGGGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYSGRSA*QGEGCP
Trigger: GGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACT...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCTCAGGCCAGATGTCCTaGACTGAGGCCCCCAAACCC +
Preference number: 2 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGSGQMS*TEAPKP
Trigger: GGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGA...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCTCAGCGGAGGGAGGCTaGCCTGGACGCGGTGCCGCC +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCSAEGG*PGRGAA
Trigger: GGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGA...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCTGGGCCTCAGCGGGGTaGGCAGCGCCTTCGGGGGCA +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCWASAG*AAPSGA
Trigger: TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCA...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCCTCCATGCCAGTTGCTaGGTGGCCTACGTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHILHASC*VAYVGR
Trigger: TCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAG...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTATGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTA +
Preference number: 2 (lower is better)
Translates to: DESETKSSLPSSETSHHLCLGPP*QLLSGL
Trigger: TAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCA...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACGCTTGTCCTGATGGATaGTGGGAGCCACGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYACPDG*WEPRGW
Trigger: CCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGC...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTCAGGAATTTGGACACTaGCCACGTTCTCAGTGGACA +
Preference number: 2 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPQEFGH*PRSQWT
Trigger: TGTCCACTGAGAACGTGGGCAGTGTCCAAATTCCTG...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCAGGCTCTGCCAGGTCTaGAGAGGAATTCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRRLCQV*RGILPK
Trigger: TTTGGGAAGAATTCCTCTCCAGACCTGGCAGAGCCT...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATGTGGCCTCTGGGGGTTaGGCCTTTGAGATGACAATG +
Preference number: 2 (lower is better)
Translates to: EGDESETKSSLPSSETSHVASGG*AFEMTM
Trigger: CATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCAC...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATTACAGACTTCTATCATaGGGGACAGCGGGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: EGDESETKSSLPSSETSHYRLLS*GTAGWV
Trigger: GACCCACCCCGCTGTCCCCCATGATAGAAGTCTGTA...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATAGGGGAAGTGGGCATTaGTCACCAAGGTATTTACAG +
Preference number: 2 (lower is better)
Translates to: PAASLAGDLRETEFAKYYRGSGH*SPRYLQ
Trigger: CTGTAAATACCTTGGTGACCAATGCCCACTTCCCCT...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATACCCAGGAGGGGAAGTaGGCATTGGTCACCAAGGTA +
Preference number: 2 (lower is better)
Translates to: EGDESETKSSLPSSETSHTQEGK*ALVTKV
Trigger: TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGT...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CAA 90 bp CGTAGGGGGACAGAGCCTGGCAGGAGACACATGGAAGTTTCCGCCTaGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACAGTACAGGA +
Preference number: 2 (lower is better)
Translates to: RRGTEPGRRHMEVSA*SVSEQTPFSLYSTG
Trigger: TCCTGTACTGTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCTCTGTCCCCCTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGCCAGATGTCCTGCACTaGGGCCCCCAAACCCAAGCT +
Preference number: 2 (lower is better)
Translates to: SETKSSLPSSETSHHLNKPDVLH*GPQTQA
Trigger: AGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGG...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAGTGCTTCCGTCTCTGTaGCAAATAAGGACTCAAATG +
Preference number: 2 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAVLPSL*QIRTQM
Trigger: CATTTGAGTCCTTATTTGGCACAGAGACGGAAGCAC...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACGGACTCAAATGCGATTaGCCGCTCGGGAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYGLKCD*PLGRVG
Trigger: ACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCC...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGCGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGC +
Preference number: 2 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMRSVLP*RKRLRC
Trigger: GCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCG...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAACTGGGAGGACTGGTGTaGCCTCTGGGGGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: TNTKYISKRALETTQEWKLGGLV*PLGVGP
Trigger: AGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAG...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGTGGACTCCATGGCCGTaGAGTAGAGCGCCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: SETKSSLPSSETSHHLNKWTPWP*SRAPSG
Trigger: GCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCA...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR TCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTGCTGGACAGACCCTCTaGGCACGCAGGGAGGACCCC +
Preference number: 2 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFAGQTL*ARREDP
Trigger: GGGGTCCTCCCTGCGTGCTCAGAGGGTCTGTCCAGC...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAACTGCAGGATGTCGATaGTGCCAATGTGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTTAGCR*CQCAAA
Trigger: TGCTGCTGCACATTGGCATCATCGACATCCTGCAGT...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR GCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACTTTGCACATTTCTCCTaGAAAGGCGCGTCGGCCGGG +
Preference number: 2 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYFAHFS*KGASAG
Trigger: CCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAA...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCAGGGCCTTCCAGGTGTaGTCCAGTTTCTTGATGAAC +
Preference number: 2 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIRAFQV*SSFLMN
Trigger: GTTCATCAAGAAACTGGAGCACACCTGGAAGGCCCT...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAGTGGTGGGTCTGGATTaGAGGCGCCAGAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: DESETKSSLPSSETSHHLVVGLD*RRQRFL
Trigger: CAAAAACCTCTGGCGCCTCCAATCCAGACCCACCAC...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAAGACTCTGCCGAGCTCTaGCCTCCAACCAGCACCCTC +
Preference number: 2 (lower is better)
Translates to: TNTKYISKRALETTQEWKDSAEL*PPTSTL
Trigger: GAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTC...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAATCCTGGGCACATCTTaGAAGTGGGGGATTCCCACA +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTILGTS*KWGIPT
Trigger: TGTGGGAATCCCCCACTTCCAAGATGTGCCCAGGAT...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCTGGGAGGACTGGTGTaGCCTCTGGGGGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCLGGLV*PLGVGP
Trigger: AGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACATCCTCGTCTGAGGCCTaGCTGGCAGTTTCTACTTCA +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTSSSEA*LAVSTS
Trigger: TGAAGTAGAAACTGCCAGCCAGGCCTCAGACGAGGA...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACAACCAAAGAGTGCAGTaGGCAGGGGCTCTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYNQRVQ*AGALLP
Trigger: AGGGAGAAGAGCCCCTGCCCACTGCACTCTTTGGTT...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACCGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGC +
Preference number: 2 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYRSVLP*RKRLRC
Trigger: GCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCG...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCACACAGAGCCCTGCCTaGGAGGTTCTCCGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCTQSPA*EVLRPS
Trigger: AGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGT...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACACACAAGAATGGAAATaGAATGGTATCCACAGAGGT +
Preference number: 2 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYTQEWK*NGIHRG
Trigger: ACCTCTGTGGATACCATTTCATTTCCATTCTTGTGT...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAACGGGCATGTCCTGCATaGAGTCCAGGTCCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: TNTKYISKRALETTQEWKRACPA*SPGPCR
Trigger: CCTACAAGGACCTGGACTTCATGCAGGACATGCCCG...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCGGACTCAAATGCGATTaGCCGCTCGGGAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCGLKCD*PLGRVG
Trigger: ACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCC...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAACCACCGCGAACAGCCTaGCTTCTTCCTCAGGACACA +
Preference number: 2 (lower is better)
Translates to: TNTKYISKRALETTQEWKPPRTA*LLPQDT
Trigger: TGTGTCCTGAGGAAGAAGCCAGGCTGTTCGCGGTGG...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGGGTCCGCTTCCCACGTaGATGGAGGCAGAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLGPLPT*MEAELL
Trigger: GAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACC...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCCTTCTCCTTCTTGCTaGCGCGCCGCTTGTAGGTGG +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCPSPSC*RAACRW
Trigger: CCACCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGTCTCCAAAAGGGCCTTaGAGACAACACAAGAATGGA +
Preference number: 2 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMSPKGP*RQHKNG
Trigger: TCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGA...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAATGCCCACGTTCTCAGTaGACAGCAGCCATCAGAGGT +
Preference number: 2 (lower is better)
Translates to: TNTKYISKRALETTQEWKCPRSQ*TAAIRG
Trigger: ACCTCTGATGGCTGCTGTCCACTGAGAACGTGGGCA...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TGCTTATTGGTCATAATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGTACCCAAAGCCCTTCTaGAAAACAACTGACGTCAGA +
Preference number: 2 (lower is better)
Translates to: CLLVIMTTAGPEDLTATWYPKPF*KTTDVR
Trigger: TCTGACGTCAGTTGTTTTCCAGAAGGGCTTTGGGTA...CCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCATTATGACCAATAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCAGCTCCTCACATCCTaGGCACATCTTGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCQLLTS*AHLGSG
Trigger: CCCACTTCCAAGATGTGCCCAGGATGTGAGGAGCTG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR GCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCTCTGGGTCGGGGGCTaGATAGAAATTATGTGTCGC +
Preference number: 2 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCLWVGG*IEIMCR
Trigger: GCGACACATAATTTCTATGCAGCCCCCGACCCAGAG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGATCCTGGGCACATCTTaGAAGTGGGGGATTCCCACA +
Preference number: 2 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLILGTS*KWGIPT
Trigger: TGTGGGAATCCCCCACTTCCAAGATGTGCCCAGGAT...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGTACAGTACAGGAATTTaGACACTGCCCACGTTCTCA +
Preference number: 2 (lower is better)
Translates to: SETKSSLPSSETSHHLNKYSTGI*TLPTFS
Trigger: TGAGAACGTGGGCAGTGTCCAAATTCCTGTACTGTA...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCAGGTCCTTGTAGGTaGGGAAGCTCTTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLPGPCR*GSSSPS
Trigger: AGAAGGAGAAGAGCTTCCCCACCTACAAGGACCTGG...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAAGAATGGAAATGAAATaGTATCCACAGAGGTTTGCA +
Preference number: 2 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTRMEMK*YPQRFA
Trigger: TGCAAACCTCTGTGGATACCATTTCATTTCCATTCT...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR TCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACACACAAGAATGGAAATaGAATGGTATCCACAGAGGT +
Preference number: 2 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYTQEWK*NGIHRG
Trigger: ACCTCTGTGGATACCATTTCATTTCCATTCTTGTGT...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTATGCCAGTTGCTGAGTaGCCTACGTTGGAAGAGAAG +
Preference number: 2 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFMPVAE*PTLEEK
Trigger: CTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCAT...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp GGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGCTaGCCTGGACGCGGTGCCGCCCGCCCGGGGCCACAC +
Preference number: 3 (lower is better)
Translates to: GTGVPCHSAEGG*PGRGAARPGPH
Trigger: GTGTGGCCCCGGGCGGGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGAGTGACACGGGACACCAGTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp CCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTaGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: PSASVQGEDEVR*GGEAGISRALG
Trigger: GCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp GTGTCACTCAGCGGAGGGAGGCTGCCCTGGACGCGGTaGCGCCCGCCCGGGGCCACACCTGCTGCTCCGAGT +
Preference number: 3 (lower is better)
Translates to: VSLSGGRLPWTR*RPPGATPAAPS
Trigger: ACTCGGAGCAGCAGGTGTGGCCCCGGGCGGGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGAGTGACAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp CACAGCAGGGGCCTTCCGGGCGCAGCGTGTGGGCTGTaGAGGAGGCCGACGGGACGTGAACAGCGGGTGGCG +
Preference number: 3 (lower is better)
Translates to: HSRGLPGAACGL*RRPTGREQRVA
Trigger: CGCCACCCGCTGTTCACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGCGCCCGGAAGGCCCCTGCTGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp GTGCTCTGGGCGCCCTGCGCCTGCCGCTCGCGCTCGTaGTGGTCGATGTTGTGCACGCCCAGCAGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: VLWAPCACRSRS*WSMLCTPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAGAGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR GCA 72 bp GCGCCTTCTGGCCCACAGGCCGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCTGCCGCTCGCGCTCGT +
Preference number: 3 (lower is better)
Translates to: APSGPQAASHLR*SGRPAPAARAR
Trigger: ACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCTGTGGGCCAGAAGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp GGACAAGTCCCCAGCCCTGAGCTCCGCCAGCGTGGGTaGCAGCCTGGGGAAGAGGAGGCCTGGCCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GQVPSPELRQRG*QPGEEEAWPSS
Trigger: GCTGGAGGGCCAGGCCTCCTCTTCCCCAGGCTGCCACCCACGCTGGCGGAGCTCAGGGCTGGGGACTTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAGAAAACGTCTCCGTaGCCTGGGCCCTCCATGCCA +
Preference number: 3 (lower is better)
Translates to: PELWASAGWAAPSGAAGAEKTSP*PGPSMP
Trigger: TGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTC...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCACCTGCGTCCTCCTCTTaGGGGACCACAATCTCCACG +
Preference number: 3 (lower is better)
Translates to: PELWASAGWAAPSGAAGAPASSS*GTTIST
Trigger: CGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGG...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR TCA 72 bp GGCGTCAGGGCCCCACTGCGGCGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGCAGGGCGAGGGCTGTC +
Preference number: 3 (lower is better)
Translates to: GVRAPLRREHSC*VAAVLGRARAV
Trigger: GACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp GTAGAGCGCCTTCTGGCCCACAGGCCGCTTCTCATCTaGGGTGCTCTGGGCGCCCTGCGCCTGCCGCTCGCG +
Preference number: 3 (lower is better)
Translates to: VERLLAHRPLLI*GALGALRLPLA
Trigger: CGCGAGCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCTGTGGGCCAGAAGGCGCTCTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR GCA 72 bp CGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATaGTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGAG +
Preference number: 3 (lower is better)
Translates to: RREDPTWACPDG*WEPRGWPVPEE
Trigger: CTCCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp TTCTGGCCCACAGGCCGCTTCTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGCTCGCGCTCGTGCTGG +
Preference number: 3 (lower is better)
Translates to: FWPTGRFSSEVL*APCACRSRSCW
Trigger: CCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCTGTGGGCCAGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp AGGTCGTACTGGGCCTCCTCCCGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCGGTGGGCCCCAGCGGT +
Preference number: 3 (lower is better)
Translates to: RSYWASSRSLGI*LAEKAAVGPSG
Trigger: ACCGCTGGGGCCCACCGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCGGGAGGAGGCCCAGTACGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CAA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCACTGGCGCCCGGGTaGGACAGCTCGATCAGCGGC +
Preference number: 3 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFPLAPG*DSSISG
Trigger: GCCGCTGATCGAGCTGTCCAACCCGGGCGCCAGTGG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CAA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGAGTGGCCGCAGTGCTaGGCAGGGCGAGGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSEWPQC*AGRGLS
Trigger: GGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp CTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTaGTGGATGCTGGGAGCCACGCGGCTGGCCGGTTCC +
Preference number: 3 (lower is better)
Translates to: LSTQGGPHVGLS*WMLGATRLAGS
Trigger: GGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp TCAGGGCCCCACTGCGGCGGGAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGGCGAGGGCTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: SGPHCGGNIAAE*PQCLAGRGLSP
Trigger: TGGGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp AGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTaGGAGCCACGCGGCTGGCCGGTTCCCGAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: REDPTWACPDGC*EPRGWPVPEEG
Trigger: ACCCTCCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp TGCCAGGGCTCTGGGCAGGGCGACTCGAGGACTCCCTaGGAGGACTGGTGTGGCCTCTGGGGGTTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: CQGSGQGDSRTP*EDWCGLWGLGL
Trigger: AAGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAGGGAGTCCTCGAGTCGCCCTGCCCAGAGCCCTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGCCTCGTCTCGGCGCTTaGGATTGTCACGCACCAGAC +
Preference number: 3 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVPRLGA*DCHAPD
Trigger: GTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGG...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp CGCAGCGTGTGGGCTGTGCAGGAGGCCGACGGGACGTaGACAGCGGGTGGCGTGGCGTCATACGGAGGTTGT +
Preference number: 3 (lower is better)
Translates to: RSVWAVQEADGT*TAGGVASYGGC
Trigger: ACAACCTCCGTATGACGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp GATGGCGGGGAGAGTAAATCCAGTACCTCCCATCCGTaGACTGGACGGGGCGGGCCGGGTGGGCCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: DGGESKSSTSHP*TGRGGPGGPEE
Trigger: CTCCTCCGGCCCACCCGGCCCGCCCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCCCGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR GCA 72 bp AGGAGGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTaGTCGGGACCCCAGCCGTCCCCTCTGCAGGCCGAT +
Preference number: 3 (lower is better)
Translates to: RRVRFPRGWRQS*SGPQPSPLQAD
Trigger: ATCGGCCTGCAGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp GGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTaGTTTGGGTCTGCGCCCCGTTCTGGCTGTGCGGTG +
Preference number: 3 (lower is better)
Translates to: GLGGGFVSRGHS*FGSAPRSGCAV
Trigger: CACCGCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 72 bp GGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTaGCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTT +
Preference number: 3 (lower is better)
Translates to: GGWLPAGSVGRS*LEQPGKWSPPL
Trigger: AAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 72 bp CGCTTCTCATCTGAGGTGCTCTGGGCGCCCTGCGCCTaGCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACG +
Preference number: 3 (lower is better)
Translates to: RFSSEVLWAPCA*RSRSCWSMLCT
Trigger: CGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp CAAGCTGAGGGCAGGAGGGTCCGCTTCCCACGTGGATaGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCT +
Preference number: 3 (lower is better)
Translates to: QAEGRRVRFPRG*RQSCSGPQPSP
Trigger: AGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCCTCCTGCCCTCAGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GTGGCCCAAGGCCCGGCCTCCCGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGCCTGGGCCCTCCATGC +
Preference number: 3 (lower is better)
Translates to: VAQGPASRSVLP*RKRLRCLGPPC
Trigger: GCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCGGGCCTTGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTaGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGC +
Preference number: 3 (lower is better)
Translates to: VEGLLSWSVCPR*GPRGWVRLLHS
Trigger: GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GTTCCCGAGGAGGGTCGGCCCCTCTCCTGGGCAGAGTaGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCT +
Preference number: 3 (lower is better)
Translates to: VPEEGRPLSWAE*RGCSRGVCVLA
Trigger: AGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGGGGCCGACCCTCCTCGGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCACTaGTGTCCCGTGTCACTCAGCGGAGGGAGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: AHFSCKGASAGH*CPVSLSGGRLP
Trigger: GGGCAGCCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATaGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCACT +
Preference number: 3 (lower is better)
Translates to: GGCGETISSPSP*PCGSEPGPAAT
Trigger: AGTGGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 72 bp CGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTaGGTCTGCGCCCCGTTCTGGCTGTGCGGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: RRRLCLEGTLLL*VCAPFWLCGAG
Trigger: CCCAGCACCGCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 72 bp CGGCCGGGGAAGCCTCCACCCCTGCGTCCTCCTCTTTaGGGACCACAATCTCCACGCTGCACGCAGGCTCCA +
Preference number: 3 (lower is better)
Translates to: RPGKPPPLRPPL*GPQSPRCTQAP
Trigger: TGGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGTGGAGGCTTCCCCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CAA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGTCGTGCTGGTCGATGTaGTGCACGCCCAGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SPAKARRPGTGVPCHSAESCWSM*CTPSSR
Trigger: CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGA...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR TCA 72 bp AGGCCAAGGTCGCTTCCCAGGGCTGGACAGACCCTCTaGGCACGCAGGGAGGACCCCACGTGGGCTTGTCCT +
Preference number: 3 (lower is better)
Translates to: RPRSLPRAGQTL*ARREDPTWACP
Trigger: AGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGGTCTGTCCAGCCCTGGGAAGCGACCTTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp CACTGCGGCGGGAACATAGCTGCTGAGTGGCCGCAGTaGTTGGCAGGGCGAGGGCTGTCCCCACAGTCGATG +
Preference number: 3 (lower is better)
Translates to: HCGGNIAAEWPQ*LAGRGLSPQSM
Trigger: CATCGACTGTGGGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCGCCGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp CGGGGCTCAGGTCCCCAGAGGCCACCGCGAACAGCCTaGCTTCTTCCTCAGGACACAGGCAGGCACAGCAGA +
Preference number: 3 (lower is better)
Translates to: RGSGPQRPPRTA*LLPQDTGRHSR
Trigger: TCTGCTGTGCCTGCCTGTGTCCTGAGGAAGAAGCCAGGCTGTTCGCGGTGGCCTCTGGGGACCTGAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTaGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTG +
Preference number: 3 (lower is better)
Translates to: AEASAPPSVRWV*RDHLLPVSMAL
Trigger: CAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CAA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGGCGCCAGAGGTTTTaGCTCGAGGGGCACCTGGGA +
Preference number: 3 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGRRQRF*LEGHLG
Trigger: TCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCCT...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGGGGAGCGCTGCCCTCTaGGAGGGTGATGAGTCGGAA +
Preference number: 3 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGGSAAL*EGDESE
Trigger: TTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCCC...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGAAAAATGGGACTGGGTaGGGGACAGGCGGAGCGATT +
Preference number: 3 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVKNGTG*GTGGAI
Trigger: AATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTTT...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp TGCCCGGTGCCAGCAGATGAGCACCAGGCTGTGAACTaGGGCCAAGGTCGCTTCCCAGGGCTGGACAGACCC +
Preference number: 3 (lower is better)
Translates to: CPVPADEHQAVN*GQGRFPGLDRP
Trigger: GGGTCTGTCCAGCCCTGGGAAGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCATCTGCTGGCACCGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp ACGCTGCACGCAGGCTCCACCTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGTGGCTCCTCCTGCGGC +
Preference number: 3 (lower is better)
Translates to: TLHAGSTCTVIC*RSSSAGGSSCG
Trigger: GCCGCAGGAGGAGCCACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTGCAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp AGGAGGCCTGGCCCTCCAGCTGTGGTGGGTCTGGATTaGAGGCGCCAGAGGTTTTTGCTCGAGGGGCACCTG +
Preference number: 3 (lower is better)
Translates to: RRPGPPAVVGLD*RRQRFLLEGHL
Trigger: CAGGTGCCCCTCGAGCAAAAACCTCTGGCGCCTCCAATCCAGACCCACCACAGCTGGAGGGCCAGGCCTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp AGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTaGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATG +
Preference number: 3 (lower is better)
Translates to: RGAEASAPPSVR*VWRDHLLPVSM
Trigger: CATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 72 bp TCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTaGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: SVGRSCLEQPGK*SPPLGVTPQCL
Trigger: CAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CAA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGCATCCTGGGCACATCTaGGAAGTGGGGGATTCCCAC +
Preference number: 3 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGHPGHI*EVGDSH
Trigger: GTGGGAATCCCCCACTTCCAAGATGTGCCCAGGATG...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp GTGGATGCCCGGTGCCAGCAGATGAGCACCAGGCTGTaGACTGAGGCCAAGGTCGCTTCCCAGGGCTGGACA +
Preference number: 3 (lower is better)
Translates to: VDARCQQMSTRL*TEAKVASQGWT
Trigger: TGTCCAGCCCTGGGAAGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCATCTGCTGGCACCGGGCATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp GGACTGGTGTGGCCTCTGGGGGTTGGGCCTTTGAGATaGCAATGCCCCTGTCCCTGCTGGCCATCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: GLVWPLGVGPLR*QCPCPCWPSRS
Trigger: GGACCTGGATGGCCAGCAGGGACAGGGGCATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCACACCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp TCCACGCTGCACGCAGGCTCCACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCGGGTGGCTCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: STLHAGSTCTVI*CRSSSAGGSSC
Trigger: GCAGGAGGAGCCACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTGCAGCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp GGACTCCCTGGGAGGACTGGTGTGGCCTCTGGGGGTTaGGCCTTTGAGATGACAATGCCCCTGTCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: GLPGRTGVASGG*AFEMTMPLSLL
Trigger: CAGCAGGGACAGGGGCATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAGGGAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GGCAATGGAGGCTGTAGTGGCTTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTCGGGCCGGCCTTCGTC +
Preference number: 3 (lower is better)
Translates to: GNGGCSGFFERR*RAGQEVGPAFV
Trigger: GACGAAGGCCGGCCCGACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAAGCCACTACAGCCTCCATTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CAA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGTGTGGTGGGTCTGGATaGGAGGCGCCAGAGGTTTTT +
Preference number: 3 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGCGGSG*EAPEVF
Trigger: AAAAACCTCTGGCGCCTCCAATCCAGACCCACCACA...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp TCCCCACAGTCGATGTTCAGGCCAGATGTCCTGCACTaGGGCCCCCAAACCCAAGCTGAGGGCAGGAGGGTC +
Preference number: 3 (lower is better)
Translates to: SPQSMFRPDVLH*GPQTQAEGRRV
Trigger: GACCCTCCTGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCGACTGTGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp TCTTGGGGTCACTCCACAGTGCCTGGCACACAGAGGTaGTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACG +
Preference number: 3 (lower is better)
Translates to: SWGHSTVPGTQR*SERFADGRGVT
Trigger: CGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 72 bp CGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTaGATAGAAATTATGTGTCGCTCTCGCCGTCGGAGG +
Preference number: 3 (lower is better)
Translates to: RSRSGARLWVGG*IEIMCRSRRRR
Trigger: CCTCCGACGGCGAGAGCGACACATAATTTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp GGGTTTGAGGGACACAGCACCCTCGTCTCGGCGCTTTaGATTGTCACGCACCAGACCACGGGGCGGAGGAAT +
Preference number: 3 (lower is better)
Translates to: GFEGHSTLVSAL*IVTHQTTGRRN
Trigger: ATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTGCTGTGTCCCTCAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTaGGACCGAATGACATTCCCAGTGACGCATGCAGCC +
Preference number: 3 (lower is better)
Translates to: VMVLPYGAPGST*DRMTFPVTHAA
Trigger: GGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 72 bp GCTGCTCCGACGTCTCCGAGGGGGACCGCTCAGGAATaGAGAGGGATGTGGATGACAGAGTCGTGGCAATGG +
Preference number: 3 (lower is better)
Translates to: AAPTSPRGTAQE*RGMWMTESWQW
Trigger: CCATTGCCACGACTCTGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCCCCTCGGAGACGTCGGAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp CTGCACTGTAATCTGCTGCAGATCCTCTTCCGCGGGTaGCTCCTCCTGCGGCCTGCCATCCTGTCCAGACGA +
Preference number: 3 (lower is better)
Translates to: LHCNLLQILFRG*LLLRPAILSRR
Trigger: TCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CAA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGTGGTGGGTCTGGATaGGAGGCGCCAGAGGTTTTT +
Preference number: 3 (lower is better)
Translates to: HPRLGALDCHAPDHGAEECGGSG*EAPEVF
Trigger: AAAAACCTCTGGCGCCTCCAATCCAGACCCACCACA...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAGGCCCTCCATGCCAGTaGCTGAGTGGCCTACGTTGG +
Preference number: 3 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVGPPCQ*LSGLRW
Trigger: CCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCC...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp CTGCCCACGTTCTCAGTGGACAGCAGCCATCAGAGGTaGCCCAGGAGGGGAAGTGGGCATTGGTCACCAAGG +
Preference number: 3 (lower is better)
Translates to: LPTFSVDSSHQR*PRRGSGHWSPR
Trigger: CCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGTCCACTGAGAACGTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp TCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTaGCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTA +
Preference number: 3 (lower is better)
Translates to: SRSVLPWRKRLR*LGPPCQLLSGL
Trigger: TAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp GGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTaGCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: GKWSPPLGVTPQ*LAHRGARRGLL
Trigger: CAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR GCA 72 bp GGGACCACAATCTCCACGCTGCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGATCCTCTTCCGCGGGT +
Preference number: 3 (lower is better)
Translates to: GTTISTLHAGST*TVICCRSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CCA 72 bp TTCGGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAAATTATGTGTCGCTCT +
Preference number: 3 (lower is better)
Translates to: FGGSRSRSGARL*VGGCIEIMCRS
Trigger: AGAGCGACACATAATTTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CAA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCGGTATCCACAGAGGTTaGCACATTTCTCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERGIHRG*HISPAK
Trigger: CTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACC...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp GGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTTTGGGGATCTGGATTTaGACTAAACCGTGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: GPEDLTATWGPCGVPGGPLGIWI*TKPCGL
Trigger: GAGACCACACGGTTTAGTCAAAATCCAGATCCCCAA...AGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR TCA 72 bp AACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTaGGTGGCCTACGTTGGAAGAGAAGGACAAGTCCCC +
Preference number: 3 (lower is better)
Translates to: NVSVAWALHASC*VAYVGREGQVP
Trigger: GGGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp AGCGCCTGGTCCGGGGCCAGCGTGGCTGACCTCAATTaGAGCCGTGATTTACCCAAAGCCCTTCTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: SAWSGASVADLN*SRDLPKALLEN
Trigger: GTTTTCCAGAAGGGCTTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCACGCTGGCCCCGGACCAGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR CCA 72 bp TGCAGGAGGCCGACGGGACGTGAACAGCGGGTGGCGTaGCGTCATACGGAGGTTGTAACAGACAAAACACAG +
Preference number: 3 (lower is better)
Translates to: CRRPTGREQRVA*RHTEVVTDKTQ
Trigger: CTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GAACCTGGGATGCAAACCAGTGTTTGGGGCCAGGAGTaGCTGTATGGTTTCAGAGGCGCCCACCACTCTGGG +
Preference number: 3 (lower is better)
Translates to: EPGMQTSVWGQE*LYGFRGAHHSG
Trigger: CCCAGAGTGGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCATCCCAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTTGTGGTGGGTCTGGATaGGAGGCGCCAGAGGTTTTT +
Preference number: 3 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGCGGSG*EAPEVF
Trigger: AAAAACCTCTGGCGCCTCCAATCCAGACCCACCACA...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp TGCCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGTTGGGGATCTGGATTTaGACTAAACCGTGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: CLAHRGARRGLLMGGESRLGIWI*TKPCGL
Trigger: GAGACCACACGGTTTAGTCAAAATCCAGATCCCCAA...CCGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR-3UTR CAA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTCCCTTGAGGTCGAACTaGAGGTGCATCTTGACCACG +
Preference number: 3 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRPLRSN*RCILTT
Trigger: CGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGG...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR GCA 72 bp CCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTACGTTGGAAGAGAAGG +
Preference number: 3 (lower is better)
Translates to: PWRKRLRCLGPP*QLLSGLRWKRR
Trigger: CCTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp GGCATTGGTCACCAAGGTATTTACAGACTTCTATCATaGGGGACAGCGGGGTGGGTCCAGCAGCCTCCCTCG +
Preference number: 3 (lower is better)
Translates to: GIGHQGIYRLLS*GTAGWVQQPPS
Trigger: CGAGGGAGGCTGCTGGACCCACCCCGCTGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CCA 72 bp ACCAGACCACGGGGCGGAGGAATGGAGTGGCATCCCTaGGGGGAGTTAAGACACACGAGGTTTGCAGTTTCA +
Preference number: 3 (lower is better)
Translates to: TRPRGGGMEWHP*GELRHTRFAVS
Trigger: TGAAACTGCAAACCTCGTGTGTCTTAACTCCCCCCAGGGATGCCACTCCATTCCTCCGCCCCGTGGTCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCAGGACTCAAATGCGATaGGCCGCTCGGGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIRTQMR*AAREGG
Trigger: CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCT...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACATGGATGGAGGCAGAGTaGCTCGGGACCCCAGCCGTC +
Preference number: 3 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTWMEAE*LGTPAV
Trigger: GACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCA...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATAGGCGCCAGAGGTTTTaGCTCGAGGGGCACCTGGGA +
Preference number: 3 (lower is better)
Translates to: EGDESETKSSLPSSETSHRRQRF*LEGHLG
Trigger: TCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCCT...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCAGGTATCCACAGAGGTTaGCACATTTCTCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: SALWIVTHQTTGRRNGVAGIHRG*HISPAK
Trigger: CTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACC...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR TCA 72 bp AGCCGTGATTTACCCAAAGCCCTTCTGGAAAACAACTaGCGTCAGACACTGAGCTTCCGGCCGGGGACCTGC +
Preference number: 3 (lower is better)
Translates to: SRDLPKALLENN*RQTLSFRPGTC
Trigger: GCAGGTCCCCGGCCGGAAGCTCAGTGTCTGACGTCAGTTGTTTTCCAGAAGGGCTTTGGGTAAATCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
3UTR GCA 72 bp TCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTaGCTGGGAGGTTCTCCGGCCGTCTCAGACCCCACA +
Preference number: 3 (lower is better)
Translates to: SYGGCNRQNTEP*LGGSPAVSDPT
Trigger: TGTGGGGTCTGAGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp ATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTaGAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTG +
Preference number: 3 (lower is better)
Translates to: MKWYPQRFAHFS*KGASAGHWCPV
Trigger: CACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGACGCGGGGCAGGATGTaGTTCATGACCACGACGCGG +
Preference number: 3 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMTRGRM*FMTTTR
Trigger: CCGCGTCGTGGTCATGAACAACATCCTGCCCCGCGT...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR TCA 72 bp CCCTTGCTTATTGGTCATAATGACAACAGCAGGCCCTaGGGATCTCACAGCTACGTGGGGCCCATGTGGCGT +
Preference number: 3 (lower is better)
Translates to: PLLIGHNDNSRP*GSHSYVGPMWR
Trigger: ACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCATTATGACCAATAAGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CCA 72 bp GGACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTaGGCATTGGTCACCAAGGTATTTACAGACTTCTAT +
Preference number: 3 (lower is better)
Translates to: GQQPSEVTQEGK*ALVTKVFTDFY
Trigger: ATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTGGTATCCACAGAGGTTaGCACATTTCTCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPGIHRG*HISPAK
Trigger: CTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACC...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAAGGAACTCGGCCTCCTaGTGCATGACGGTCTTGATG +
Preference number: 3 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTRNSAS*CMTVLM
Trigger: CATCAAGACCGTCATGCACAAGGAGGCCGAGTTCCT...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR-3UTR CAA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGTCACCCCACAGGCTCTaGGCGTCTCTGGTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLSPHRL*ASLVPG
Trigger: CCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTGA...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTTGTTTCAGAATCAGTTaGGCCATAAAAATGGGACTG +
Preference number: 3 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGCFRIS*AIKMGL
Trigger: CAGTCCCATTTTTATGGCCAAACTGATTCTGAAACA...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR GCA 72 bp CACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTaGACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCA +
Preference number: 3 (lower is better)
Translates to: HKNGNEMVSTEV*TFLLQRRVGRA
Trigger: TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAACATCCTGGGCACATCTaGGAAGTGGGGGATTCCCAC +
Preference number: 3 (lower is better)
Translates to: TNTKYISKRALETTQEWKHPGHI*EVGDSH
Trigger: GTGGGAATCCCCCACTTCCAAGATGTGCCCAGGATG...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR-3UTR CAA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGGCTGAGTGGCCTACGTaGGAAGAGAAGGACAAGTCC +
Preference number: 3 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLAEWPT*EEKDKS
Trigger: GGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGC...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCGAGGGGGACCCGAGCTaGGACCGCCGCCGCCGAACA +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGEGDPS*DRRRRT
Trigger: TGTTCGGCGGCGGCGGTCGCAGCTCGGGTCCCCCTC...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
CDS-3UTR CCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCGTACCTCCAGCTCCATaGCCGCGCGCGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: GGEAGISRALGLSGVGSAVPPAP*PRADGG
Trigger: GCCGCCGTCCGCGCGCGGCCATGGAGCTGGAGGTAC...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
CDS-3UTR CCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGTGGGCCTCAGCGGGGTaGGCAGCGCCTTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARWASAG*AAPSGA
Trigger: TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCA...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCCCTCTGCAGGCCGATaGGGCCCCCGGGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRPSAGR*GPRGSG
Trigger: ACCTGAGCCCCGGGGGCCCCATCGGCCTGCAGAGGG...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGGGACAGGGCGGGGGCTaGTGGGTGGATGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGGQGGG*WVDARC
Trigger: GCACCGGGCATCCACCCATCAGCCCCCGCCCTGTCC...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
77% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCGAGGGGGACCCGAGCTaGGACCGCCGCCGCCGAACA +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSEGDPS*DRRRRT
Trigger: TGTTCGGCGGCGGCGGTCGCAGCTCGGGTCCCCCTC...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
CDS-3UTR CCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCTCCTCGTCCGAGGCCTaGCTGGCAGGTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGSSSEA*LAGAPS
Trigger: GGAGGGCGCACCTGCCAGCCAGGCCTCGGACGAGGA...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCTGGGAGCCACGCGGCTaGCCGGTTCCCGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGWEPRG*PVPEEG
Trigger: ACCCTCCTCGGGAACCGGCCAGCCGCGTGGCTCCCA...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTGTACCGCGGCTaGTCCGACGTCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQRLYRG*SDVSEG
Trigger: CCCCTCGGAGACGTCGGAGCAGCCGCGGTACAGGCG...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGGCTGAGTGGCCGCAGTaGTTGGCAGGGCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARAEWPQ*LAGRGL
Trigger: CAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGC...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCGCTGAGTGGCCGCAGTaGTTGGCAGGGCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGAEWPQ*LAGRGL
Trigger: CAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGC...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGGCAGCGTGTGGGCTGTaGAGGAGGCCGACGGGACGT +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARAACGL*RRPTGR
Trigger: ACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGC...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGTCAGCGGAGGGAGGCTaGCCTGGACGCGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQSAEGG*PGRGAA
Trigger: GGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGA...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGTACCTCCAGCTCCATaGCCGCGCGCGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGVPPAP*PRADGG
Trigger: GCCGCCGTCCGCGCGCGGCCATGGAGCTGGAGGTAC...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
CDS-3UTR CCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGTCGCGTTCGGGCTTaGAGCTCAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARRRVRA*SSGGPR
Trigger: CCGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACG...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGTGTCATCCGATTCGATaGCCTCCCCGCGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEACHPIR*PPRARR
Trigger: GCGCCGCGCGCGGGGAGGCCATCGAATCGGATGACA...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGTGGGCCTCAGCGGGGTaGGCAGCGCCTTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQWASAG*AAPSGA
Trigger: TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCA...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGTCGGGCCGGCCTTCGTCCTCCAGCGTGGGGTAGCTGCGGGCCCGAGGACGAGGTCCGGTaGGGCGGCGAGGCGGGCATC +
Preference number: 4 (lower is better)
Translates to: RAGGRAGLRPPAWGSCGPEDEVR*GGEAGI
Trigger: GATGCCCGCCTCGCCGCCCCACCGGACCTCGTCCTC...GGGCCCGCAGCTACCCCACGCTGGAGGACGAAGGCCGGCCCGACCTCCTGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGGAGGACGAGGTCCGGTaGGGCGGCGAGGCGGGCATC +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSREDEVR*GGEAGI
Trigger: GATGCCCGCCTCGCCGCCCCACCGGACCTCGTCCTC...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCCTCCGCCAGCGTGGGTaGCAGCCTGGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGEAGISRALGLSGVGSALRQRG*QPGEEE
Trigger: CTCCTCTTCCCCAGGCTGCCACCCACGCTGGCGGAG...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCCCTCTCAGGGGTCCTaGGGAAGGGCAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARPSQGS*GRAGWV
Trigger: CACCCACCCTGCCCTTCCCCAGGACCCCTGAGAGGG...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCATGGGGGACAGCGGGGTaGGTCCAGCAGCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGAWGTAG*VQQPPS
Trigger: CGAGGGAGGCTGCTGGACCCACCCCGCTGTCCCCCA...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCCCTGACCTTCCGCCCTaGGCTGGTCTCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSPDLPP*AGLLWP
Trigger: GGGCCACAGGAGACCAGCTCAGGGCGGAAGGTCAGG...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGGCCAGGGCCCGGCTGTaGCGTCATGGACAGAACCTC +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARARARL*RHGQNL
Trigger: GAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGC...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGACCAGGCAGTCCCGCTaGAGCGTCTTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRTRQSR*SVLTRA
Trigger: CGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGT...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCACGCCTGTACCGCGGCTaGTCCGACGTCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGARLYRG*SDVSEG
Trigger: CCCCTCGGAGACGTCGGAGCAGCCGCGGTACAGGCG...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGGTCCAGACGACTGTGTaGGCCGCCTGTACCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRVQTTV*AACTAA
Trigger: AGCCGCGGTACAGGCGGCGCACACAGTCGTCTGGAC...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGCCGTCGGCATCCGTaGAGGGGGAGGACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRGRRHP*RGRTRS
Trigger: GGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCGTCAGGGCCCCACTaGGGCGGGAACATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAASGPH*GGNIAA
Trigger: AGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGC...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCTCTTGGCGTCTCTGGTaGCAGGGCTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGSWRLW*QGSGQG
Trigger: GCCCTGCCCAGAGCCCTGGCACCAGAGACGCCAAGA...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGPNFFP*PGPGCA
Trigger: GGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGG...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGSSEVL*APCACR
Trigger: GCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGA...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRSSEVL*APCACR
Trigger: GCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGA...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCGCGCGGCGCCACCCTaGATGGACTCCATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQRAAPP*MDSMAV
Trigger: CACGGCCATGGAGTCCATCCAGGGTGGCGCCGCGCG...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCATGTCATCCGATTCGATaGCCTCCCCGCGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGACHPIR*PPRARR
Trigger: GCGCCGCGCGCGGGGAGGCCATCGAATCGGATGACA...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCGCGCCCCTTCTTaGAGGGCGAGGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQRRAPS*RARTSG
Trigger: CCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCG...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCACGCCGCGCCCCTTCTTaGAGGGCGAGGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGARRAPS*RARTSG
Trigger: CCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCG...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGCGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEARSLGI*LAEKAA
Trigger: CGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCG...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGTCCTCGTCCGAGGCCTaGCTGGCAGGTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRSSSEA*LAGAPS
Trigger: GGAGGGCGCACCTGCCAGCCAGGCCTCGGACGAGGA...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGTCCTCGTCCGAGGCCTaGCTGGCAGGTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGSSSEA*LAGAPS
Trigger: GGAGGGCGCACCTGCCAGCCAGGCCTCGGACGAGGA...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCTCCGCCAGCGTGGGTaGCAGCCTGGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGLRQRG*QPGEEE
Trigger: CTCCTCTTCCCCAGGCTGCCACCCACGCTGGCGGAG...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGTGGGGACCTCGGGGATaGGTCCGGCTTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARWGPRG*VRLLHS
Trigger: GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCA...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGCTGGTGCCAGGGCTCTaGGCAGGGCGACTCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRLVPGL*AGRLED
Trigger: GTCCTCGAGTCGCCCTGCCCAGAGCCCTGGCACCAG...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGACAAGTCCCCAGCCCTaGGCTCCGCCAGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRTSPQP*APPAWV
Trigger: CACCCACGCTGGCGGAGCTCAGGGCTGGGGACTTGT...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGAGGGGGCGGGGAGCCTaGCCTTCCGCCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVRGRGA*PSALSW
Trigger: CCAGCTCAGGGCGGAAGGTCAGGCTCCCCGCCCCCT...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGGCTGGACAGACCCTCTaGGCACGCAGGGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQAGQTL*ARREDP
Trigger: GGGGTCCTCCCTGCGTGCTCAGAGGGTCTGTCCAGC...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCACCCTCGCGGGGGATCTaGGGGAGACCGAGTTCGCTA +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGAPSRGI*GRPSSL
Trigger: TAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGG...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCGGTGGTTTCGCCGGATaGGTCCACACCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGGGFAG*VHTSMA
Trigger: GGCCATCGAGGTGTGGACGCATCCGGCGAAACCACC...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGGGTGGTTTCGCCGGATaGGTCCACACCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARGGFAG*VHTSMA
Trigger: GGCCATCGAGGTGTGGACGCATCCGGCGAAACCACC...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCCGACGCGGATGTTCTTaGCCCCCGACTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGRRGCS*PPTARS
Trigger: ACTGCGTGCAGTCGGGGGGCAAGAACATCCGCGTCG...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGCGCCTGTACCGCGGCTaGTCCGACGTCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWRLYRG*SDVSEG
Trigger: CCCCTCGGAGACGTCGGAGCAGCCGCGGTACAGGCG...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCGGGTGGCTCCTCCTaGGGCCTGCCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGAAGGSS*GLPSCP
Trigger: TGGACAGGATGGCAGGCCGCAGGAGGAGCCACCCGC...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGATGGAGGCAGAGTTaGTCGGGACCCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRGWRQS*SGPQPS
Trigger: GGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCC...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGCAGCGTGTGGGCTGTaGAGGAGGCCGACGGGACGT +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSAACGL*RRPTGR
Trigger: ACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGC...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCTTGTCCTGATGGATaGTGGGAGCCACGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAACPDG*WEPRGW
Trigger: CCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGC...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRRCPAG*HPSGWR
Trigger: CCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCG...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEARCPAG*HPSGWR
Trigger: CCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCG...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGCGGAAGTCCTGGAAGTaGTGGGCGGGGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEARKSWK*WAGVRL
Trigger: CAACCTCACCCCCGCCCACCACTTCCAGGACTTCCG...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSSSEVL*APCACR
Trigger: GCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGA...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGCTCGGCATAGAAGCTaGGGCGGTGGACGGACACCG +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGAARHRS*GGGRTP
Trigger: CGGTGTCCGTCCACCGCCCCAGCTTCTATGCCGAGC...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGTCCTCGTCCGAGGCCTaGCTGGCAGGTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RWLASRWLRGTELPRAAGSSSEA*LAGAPS
Trigger: GGAGGGCGCACCTGCCAGCCAGGCCTCGGACGAGGA...CCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGGGGGAAGAGGAGGCCTaGCCCTCCAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRGEEEA*PSSCGG
Trigger: CCCACCACAGCTGGAGGGCCAGGCCTCCTCTTCCCC...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGACTCTGCCGAGCTCTaGCCTCCAACCAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEADSAEL*PPTSTL
Trigger: GAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTC...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGTGGGGAAGGGCAGGGTaGGTGACTCTGCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRWGRAG*VTLPSS
Trigger: AGAGCTCGGCAGAGTCACCCACCCTGCCCTTCCCCA...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGCCCTCTCAGGGGTCCTaGGGAAGGGCAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSPSQGS*GRAGWV
Trigger: CACCCACCCTGCCCTTCCCCAGGACCCCTGAGAGGG...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCACACAGAGCCCTGCCTaGGAGGTTCTCCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGEAGISRALGLSGVGSATQSPA*EVLRPS
Trigger: AGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGT...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCGACGTGAACAGCGGGTaGCGTGGCGTCATACGGAGG +
Preference number: 4 (lower is better)
Translates to: GGEAGISRALGLSGVGSADVNSG*RGVIRR
Trigger: CCTCCGTATGACGCCACGCCACCCGCTGTTCACGTC...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGCTGGTGCCAGGGCTCTaGGCAGGGCGACTCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRLVPGL*AGRLED
Trigger: GTCCTCGAGTCGCCCTGCCCAGAGCCCTGGCACCAG...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCACCCCACAGGCTCTTaGCGTCTCTGGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGHPTGS*RLWCQG
Trigger: GCCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTG...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGGCGTCGGCCGGGCACTaGTGTCCCGTGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQASAGH*CPVSLS
Trigger: GCTGAGTGACACGGGACACCAGTGCCCGGCCGACGC...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGAGGCGGCCACCCCCGTaGTCGGGTGGGAGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLRRPPP*SGGRGG
Trigger: TCCGCCTCTCCCACCCGACCACGGGGGTGGCCGCCT...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR TCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGCCAGATGTCCTGCACTaGGGCCCCCAAACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAPDVLH*GPQTQA
Trigger: AGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGG...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGCCAACCAGCACCCTCTaGGCGCAGCGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWPTSTL*AQRAQE
Trigger: TTCCTGGGCCCGCTGCGCTCAGAGGGTGCTGGTTGG...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGCCCGGTGCCAGCAGATaGGCACCAGGCTGTGAACTG +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRPGASR*APGCEL
Trigger: CAGTTCACAGCCTGGTGCTCATCTGCTGGCACCGGG...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGTTGAACCACCGGAGATaGGGAGGAGGTGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRLNHRR*GGGGRR
Trigger: GCGCCTGCCACCTCCTCCTCATCTCCGGTGGTTCAA...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGGACAGGCGGAGCGATTaGACCACCGGAGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARDRRSD*TTGDEE
Trigger: CTCCTCATCTCCGGTGGTTCAATCGCTCCGCCTGTC...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCCCAGGGAGCAGCTTCTaGAGGAACTCGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGPGSSF*RNSASL
Trigger: CAAGGAGGCCGAGTTCCTGCAGAAGCTGCTCCCTGG...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGACCAGGCAGTCCCGCTaGAGCGTCTTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRTRQSR*SVLTRA
Trigger: CGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGT...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAACCAGGCAGTCCCGCTaGAGCGTCTTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGATRQSR*SVLTRA
Trigger: CGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGT...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGTCCAGACGACTGTGTaGGCCGCCTGTACCGCGGCT +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGVQTTV*AACTAA
Trigger: AGCCGCGGTACAGGCGGCGCACACAGTCGTCTGGAC...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGCTCCTCCTGCGGCCTaGCATCCTGTCCAGACGACT +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRAPPAA*HPVQTT
Trigger: AGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGC...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCCCACAATCTCCACGCTaGACGCAGGCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GGEAGISRALGLSGVGSAPQSPR*TQAPPA
Trigger: TGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGG...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCCACAATCTCCACGCTaGACGCAGGCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARPQSPR*TQAPPA
Trigger: TGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGG...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGCGGGGCCACACCTGCTaGTCCGAGTCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWRGHTC*SESPHR
Trigger: CCTGTGGGGTGACTCGGAGCAGCAGGTGTGGCCCCG...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGTCAGCGGAGGGAGGCTaGCCTGGACGCGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPRSAEGG*PGRGAA
Trigger: GGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGA...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGGGACCTGCGGCTCCCTaGTGCCCGAGGGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLGPAAP*CPRGTA
Trigger: GGCAGTGCCCCTCGGGCAGCAGGGAGCCGCAGGTCC...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCTTCCGGCCGGGGACCTaGGGCTCCCTGCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLFRPGT*GSLLPE
Trigger: CTCGGGCAGCAGGGAGCCGCAGGTCCCCGGCCGGAA...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGGTACCTCCAGCTCCATaGCCGCGCGCGGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRVPPAP*PRADGG
Trigger: GCCGCCGTCCGCGCGCGGCCATGGAGCTGGAGGTAC...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335312.8
ENST00000679828.1
CDS-3UTR CCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCCCGGCTGTGCCGTCATaGACAGAACCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGPAVPS*TEPLLG
Trigger: CCCCAACAGAGGTTCTGTCCATGACGGCACAGCCGG...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCCGGCTGTGCCGTCATaGACAGAACCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRPAVPS*TEPLLG
Trigger: CCCCAACAGAGGTTCTGTCCATGACGGCACAGCCGG...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGCCTTCTCCTTCTTGCTaGCGCGCCGCTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAPSPSC*RAACRW
Trigger: CCACCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGG...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTGGACTCCATGGCCGTaGAGTAGAGCGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GGEAGISRALGLSGVGSAWTPWP*SRAPSG
Trigger: GCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCA...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCCTGGATGGACTCCATaGCCGTGGAGTAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRPGWTP*PWSRAP
Trigger: AGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGG...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTCCCCGCAGGTCGTACTaGGCCTCCTCCCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSPRRSY*ASSRSL
Trigger: TAGCGAGCGGGAGGAGGCCCAGTACGACCTGCGGGG...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTATCCTCTTCCGCGGGTaGCTCCTCCTGCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSILFRG*LLLRPA
Trigger: GGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGAT...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGSGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRSGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCTGGCCCTCCAGCTGTaGTGGGTCTGGATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGLALQL*WVWIGG
Trigger: GCCTCCAATCCAGACCCACCACAGCTGGAGGGCCAG...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGTCGGGCCGGCCTTCGTCCTCCAGCGTGGGGTAGCTGCGGGCCCCCTTCCGCCCTGAGCTaGTCTCCTGTGGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RAGGRAGLRPPAWGSCGPPSALS*SPVAQG
Trigger: GCCTTGGGCCACAGGAGACCAGCTCAGGGCGGAAGG...GGGCCCGCAGCTACCCCACGCTGGAGGACGAAGGCCGGCCCGACCTCCTGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTCTGTGGAGCCGGGCCTaGCCCCCTAGGCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSLWSRA*PPRPCL
Trigger: GAGACATGGCCTAGGGGGCCAGGCCCGGCTCCACAG...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGACGTGAACAGCGGGTaGCGTGGCGTCATACGGAGG +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGADVNSG*RGVIRR
Trigger: CCTCCGTATGACGCCACGCCACCCGCTGTTCACGTC...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAAGTGTGTGTCCTCGCTaGGGACCTCGGGGATGGGTC +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGASVCPR*GPRGWV
Trigger: GACCCATCCCCGAGGTCCCCAGCGAGGACACACACT...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGGCGGGGGCTGATGGGTaGATGCCCGGTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWAGADG*MPGASR
Trigger: TCTGCTGGCACCGGGCATCCACCCATCAGCCCCCGC...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGCTGGGAGGACTGGTGTaGCCTCTGGGGGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRLGGLV*PLGVGP
Trigger: AGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAG...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCACTGGGAGGACTGGTGTaGCCTCTGGGGGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGALGGLV*PLGVGP
Trigger: AGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAG...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGTGGGGGACAGCGGGGTaGGTCCAGCAGCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVWGTAG*VQQPPS
Trigger: CGAGGGAGGCTGCTGGACCCACCCCGCTGTCCCCCA...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGGGGGACGTGTCGGGATaGCGTAGGGGGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRGDVSG*RRGTEP
Trigger: AGGCTCTGTCCCCCTACGCCATCCCGACACGTCCCC...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACTTACAGTCCCCGAGGCGCTCAGCGTCACGGCCCGCAGTCGGCGATGGCGGGGGCACGGCTTCGCGGTaGCTGGCTTCCCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HLQSPRRSASRPAVGDGGGTASR*LASRWL
Trigger: GAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGTGCC...CCCGCCATCGCCGACTGCGGGCCGTGACGCTGAGCGCCTCGGGGACTGTAAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR TCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCGTAGAAGTCCTGCATaGGCACGTCGCGTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGRRSPA*ARRVRA
Trigger: AGCCCGAACGCGACGTGCTCATGCAGGACTTCTACG...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGACTCGTCGTCGCTGGTaGCGTAGAAGAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQTRRRW*RRRGSH
Trigger: GTGGCTCCCTCTTCTACGTCACCAGCGACGACGAGT...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCACTCGTCGTCGCTGGTaGCGTAGAAGAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSTRRRW*RRRGSH
Trigger: GTGGCTCCCTCTTCTACGTCACCAGCGACGACGAGT...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCCAGATGTCCTGCACTaGGGCCCCCAAACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGPDVLH*GPQTQA
Trigger: AGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGG...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGACAAGTCCCCAGCCCTaGGCTCCGCCAGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVTSPQP*APPAWV
Trigger: CACCCACGCTGGCGGAGCTCAGGGCTGGGGACTTGT...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGCCTGACCTTCCGCCCTaGGCTGGTCTCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVPDLPP*AGLLWP
Trigger: GGGCCACAGGAGACCAGCTCAGGGCGGAAGGTCAGG...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GTGGCTCCTCCTGCGGCCTGCCATCCTGTCCAGACGACTGTGTGCGCCGCCTGTGAGGCCGACGGGACGTaGACAGCGGGTGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: VAPPAACHPVQTTVCAACEADGT*TAGGVA
Trigger: CGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTC...ACAGGCGGCGCACACAGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGTGGGGGTTGGGCCTTTaGGATGACAATGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAWGLGL*DDNAPV
Trigger: GACAGGGGCATTGTCATCTCAAAGGCCCAACCCCCA...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGGCCAGGGCCCGGCTGTaGCGTCATGGACAGAACCTC +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWARARL*RHGQNL
Trigger: GAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGC...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCACCACGGTGTAGCCGATaGCCAGCTGGATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGAPRCSR*PAGWHP
Trigger: AGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGG...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGGTCGAACTTGAGGTaGATCTTGACCACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGRSNLR*ILTTRG
Trigger: GCCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCT...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCCCCTCGGGCATGTCCTaGATGAAGTCCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGPSGMS*MKSRSL
Trigger: CAAGGACCTGGACTTCATGCAGGACATGCCCGAGGG...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGCCACAATCTCCACGCTaGACGCAGGCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRPQSPR*TQAPPA
Trigger: TGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGG...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCGCCAGAGGTTTTTaGTCGAGGGGCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGGARGF*SRGTWE
Trigger: CTCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCC...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCTGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSCLGPP*QLLSGL
Trigger: TAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCA...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCCCGAGGGGCACTaGCCCTTCTCCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLLPEGH*PFSPGW
Trigger: CCACCCTGGGGAGAAGGGGCAGTGCCCCTCGGGCAG...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGGTGCAACCTCCCCTGTaGAGCCAGCGGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLVQPPL*SQRGHG
Trigger: CCCGTGGCCCCGCTGGCTGCACAGGGGAGGTTGCAC...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCGCGTCCACACCTCGATaGCCCAACTTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGASTPR*PNFFPW
Trigger: CCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGC...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCGTCCACACCTCGATaGCCCAACTTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAASTPR*PNFFPW
Trigger: CCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGC...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAAGTCCTGGAAGTGGTaGGCGGGGGTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSKSWKW*AGVRLL
Trigger: CAGCAACCTCACCCCCGCCCACCACTTCCAGGACTT...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGTCGGGCCGGCCTTCGTCCTCCAGCGTGGGGTAGCTGCGGGCCCAGAAGAGGGAGCCACTaGCGCCCGGGTTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: RAGGRAGLRPPAWGSCGPRRGSH*RPGWTA
Trigger: AGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCT...GGGCCCGCAGCTACCCCACGCTGGAGGACGAAGGCCGGCCCGACCTCCTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCATGGACTCCATGGCCGTaGAGTAGAGCGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGAWTPWP*SRAPSG
Trigger: GCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCA...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGGCTGCGGTCACTTACAGTCCCCGAGGCGCTCAGCGTCACGGCCCGCAGTCGTGTCATCCGATTCGATaGCCTCCCCGCGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PAAVTYSPRGAQRHGPQSCHPIR*PPRARR
Trigger: GCGCCGCGCGCGGGGAGGCCATCGAATCGGATGACA...CGACTGCGGGCCGTGACGCTGAGCGCCTCGGGGACTGTAAGTGACCGCAGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGTGTCATCCGATTCGATaGCCTCCCCGCGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLCHPIR*PPRARR
Trigger: GCGCCGCGCGCGGGGAGGCCATCGAATCGGATGACA...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGACCGTGTCCCCATCGTaGACGAGGGCCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRTVSPS*TRAFQV
Trigger: CACCTGGAAGGCCCTCGTCCACGATGGGGACACGGT...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGACCGTGTCCCCATCGTaGACGAGGGCCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSTVSPS*TRAFQV
Trigger: CACCTGGAAGGCCCTCGTCCACGATGGGGACACGGT...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGCCCCGCAGGTCGTACTaGGCCTCCTCCCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVPRRSY*ASSRSL
Trigger: TAGCGAGCGGGAGGAGGCCCAGTACGACCTGCGGGG...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCTCGTCCGAGGCCTaGCTGGCAGGTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVSSSEA*LAGAPS
Trigger: GGAGGGCGCACCTGCCAGCCAGGCCTCGGACGAGGA...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSSGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCCAAGCAGAAGGTaGGGGGTGCCGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLLPSRR*GVPGQG
Trigger: CCCCTGCCCCGGCACCCCCCACCTTCTGCTTGGCAG...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp CGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGTCCTCCCCGTCTCCATaGCCCTGCGGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RGGWLPAGSVGRSCLEQPSSPSP*PCGSEP
Trigger: GGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGA...CGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CACTTACAGTCCCCGAGGCGCTCAGCGTCACGGCCCGCAGTCGGCGATGGCGGGTGGCTGGCTTCCCGCTaGCTCCGTGGGACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HLQSPRRSASRPAVGDGGWLASR*LRGTEL
Trigger: CAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCA...CCCGCCATCGCCGACTGCGGGCCGTGACGCTGAGCGCCTCGGGGACTGTAAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCCGGCTTCGCGGTGGCTaGCTTCCCGCTGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVRLRGG*LPAGSV
Trigger: CACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCG...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGTCCGCGGGTTCTGGTTaGGGTTCATGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEASAGSG*GSCSSQ
Trigger: CTGGCTACTACATGAACCTCAACCAGAACCCGCGGA...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGGCGGGGAGCCTaGCCTTCCGCCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSRGRGA*PSALSW
Trigger: CCAGCTCAGGGCGGAAGGTCAGGCTCCCCGCCCCCT...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTAGCAGCCATCAGAGGTaGCCCAGGAGGGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSSSHQR*PRRGSG
Trigger: CCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCT...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCATGGGAGTATTGCACTaGGCCAGGTTTCGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GGEAGISRALGLSGVGSAMGVLH*ARFRGN
Trigger: GTTCCCCCGAAACCTGGCTCAGTGCAATACTCCCAT...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGACTGACGTCAGACACTaGGCTTCCGGCCGGGGACCT +
Preference number: 4 (lower is better)
Translates to: RWLASRWLRGTELPRAAGTDVRH*ASGRGP
Trigger: AGGTCCCCGGCCGGAAGCTCAGTGTCTGACGTCAGT...CCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCCACCCAAGACACCCTaGCACGAGAGGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLPPKTP*HERAGS
Trigger: GGACCCAGCCCTCTCGTGTCAGGGTGTCTTGGGTGG...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGCGACGCGGATGTTCTTaGCCCCCGACTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: RGGWLPAGSVGRSCLEQPRRGCS*PPTARS
Trigger: ACTGCGTGCAGTCGGGGGGCAAGAACATCCGCGTCG...CGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCATCTCCTTCTCCTTCTTaGTGGCGCGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGASPSPS*WRAACR
Trigger: CCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGGAGA...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCGGCTGCGGTCACTTACAGTCCCCGAGGCGCTCAGCGTCACGGCCCGCAGTCGACCAGGCAGTCCCGCTaGAGCGTCTTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PAAVTYSPRGAQRHGPQSTRQSR*SVLTRA
Trigger: CGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGT...CGACTGCGGGCCGTGACGCTGAGCGCCTCGGGGACTGTAAGTGACCGCAGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR GCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGTGCCGCTCGCGCTCGTaGTGGTCGATGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWCRSRS*WSMLCT
Trigger: CGTGCACAACATCGACCAGCACGAGCGCGAGCGGCA...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWASHLR*SGRPAP
Trigger: AGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGC...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGCTCCTCCTGCGGCCTaGCATCCTGTCCAGACGACT +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSAPPAA*HPVQTT
Trigger: AGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGC...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGHAGST*TVICCR
Trigger: TCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTG...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGGGCGCCAGAGGTTTTTaGTCGAGGGGCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWGARGF*SRGTWE
Trigger: CTCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCC...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCATGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGACLGPP*QLLSGL
Trigger: TAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCA...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGACCCAGGGTGGCCGGCTaGGGTCACTTACAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TASRWLASRWLRGTELPRPRVAG*GHLQSP
Trigger: CGGGGACTGTAAGTGACCGCAGCCGGCCACCCTGGG...TCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCCCCAGGGTGGCCGGCTaGGGTCACTTACAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TISSPSPWPCGSEPGPAAPRVAG*GHLQSP
Trigger: CGGGGACTGTAAGTGACCGCAGCCGGCCACCCTGGG...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp ACGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGACCGTCTCCATGGCCCTaGGGTTCAGAGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TASRWLASRWLRGTELPRPSPWP*GSEPGP
Trigger: AGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGG...TCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGCCGGCTGTGCCGTCATaGACAGAACCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGPAVPS*TEPLLG
Trigger: CCCCAACAGAGGTTCTGTCCATGACGGCACAGCCGG...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSRCPAG*HPSGWR
Trigger: CCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCG...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGCGTCGCGTTCGGGCTTaGAGCTCAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPRRRVRA*SSGGPR
Trigger: CCGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACG...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTAGAAGAGGGAGCCACTaGCGCCCGGGTTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSRRGSH*RPGWTA
Trigger: AGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCT...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGTGGACTCCATGGCCGTaGAGTAGAGCGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRWTPWP*SRAPSG
Trigger: GCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCA...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGCCTGGATGGACTCCATaGCCGTGGAGTAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRPGWTP*PWSRAP
Trigger: AGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGG...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGCGCGCGGCGCCACCCTaGATGGACTCCATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGRAAPP*MDSMAV
Trigger: CACGGCCATGGAGTCCATCCAGGGTGGCGCCGCGCG...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGACGCCGCGCCCCTTCTTaGAGGGCGAGGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TASRWLASRWLRGTELPRRRAPS*RARTSG
Trigger: CCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCG...TCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCCCCCGCAGGTCGTACTaGGCCTCCTCCCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: TISSPSPWPCGSEPGPAAPRRSY*ASSRSL
Trigger: TAGCGAGCGGGAGGAGGCCCAGTACGACCTGCGGGG...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGACCCCGCAGGTCGTACTaGGCCTCCTCCCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: TASRWLASRWLRGTELPRPRRSY*ASSRSL
Trigger: TAGCGAGCGGGAGGAGGCCCAGTACGACCTGCGGGG...TCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGGACTCAAATGCGATTaGCCGCTCGGGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGAGLKCD*PLGRVG
Trigger: ACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCC...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGTGGTGGGTCTGGATTaGAGGCGCCAGAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAVVGLD*RRQRFL
Trigger: CAAAAACCTCTGGCGCCTCCAATCCAGACCCACCAC...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGGTGGTGGGTCTGGATTaGAGGCGCCAGAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRVVGLD*RRQRFL
Trigger: CAAAAACCTCTGGCGCCTCCAATCCAGACCCACCAC...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGCAGCTGTGGTGGGTCTaGATTGGAGGCGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRQLWWV*IGGARG
Trigger: ACCTCTGGCGCCTCCAATCCAGACCCACCACAGCTG...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGCGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEARSVLP*RKRLRC
Trigger: GCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCG...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGAGCGCTGCCCTCTTaGAGGGTGATGAGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRGALPS*RVMSRK
Trigger: TTTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCC...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGGAACAGCGGGTGGCGTaGCGTCATACGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQEQRVA*RHTEVV
Trigger: TACAACCTCCGTATGACGCCACGCCACCCGCTGTTC...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGCCTCGGCACAGTCAGTaGAGCACGTCAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGPRHSQ*STSASV
Trigger: AACCGAGGCTGACGTGCTCCACTGACTGTGCCGAGG...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCAAAAGTAGATGTCGGTaGCGGGCGCGTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: WGGEAGISRALGLSGVGSKSRCR*RARPPR
Trigger: ACGAGGAGGACGCGCCCGCCACCGACATCTACTTTT...GCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539785.5
ENST00000679885.1
CDS-3UTR CCA 90 bp ACGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGGTGACGACGTGCGGTaGGTAGGGGCACAGGCACGC +
Preference number: 4 (lower is better)
Translates to: TASRWLASRWLRGTELPRGDDVR*VGAQAR
Trigger: GCGTGCCTGTGCCCCTACCCACCGCACGTCGTCACC...TCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp TCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGATGCAGCCCAGCGCCTaGTCCGGGGCCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SERFADGRGVTAASAEALMQPSA*SGASVA
Trigger: AGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCAT...CAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCACTCTGCTGACCTGTGCATGCAGCCCAGCGCCTaGTCCGGGGCCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SMALRFRARPCSHSADLCMQPSA*SGASVA
Trigger: AGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCAT...GCACAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCAGAGAGGGGCTCGCTaGGGTCTGGCCGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VERPSPPRLHGPAVQSPAQRGAR*GLAGVR
Trigger: TCGGACCCCGGCCAGACCCCAGCGAGCCCCTCTCTG...GGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGTACGTGGGGCCCATGTaGCGTCCCAGGGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLYVGPM*RPRGTS
Trigger: GGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTA...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGCGGGCATGTCCTGCATaGAGTCCAGGTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSRACPA*SPGPCR
Trigger: CCTACAAGGACCTGGACTTCATGCAGGACATGCCCG...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTACAAGTCCCCAGCCCTaGGCTCCGCCAGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSTSPQP*APPAWV
Trigger: CACCCACGCTGGCGGAGCTCAGGGCTGGGGACTTGT...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCCCAACCAGCACCCTCTaGGCGCAGCGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERPTSTL*AQRAQE
Trigger: TTCCTGGGCCCGCTGCGCTCAGAGGGTGCTGGTTGG...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCAACCAGCACCCTCTaGGCGCAGCGGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFPTSTL*AQRAQE
Trigger: TTCCTGGGCCCGCTGCGCTCAGAGGGTGCTGGTTGG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGTGGGGGTTGGGCCTTTaGGATGACAATGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRWGLGL*DDNAPV
Trigger: GACAGGGGCATTGTCATCTCAAAGGCCCAACCCCCA...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAGACAGTACCATGGTaGAGGACCCCATGGCAATGG +
Preference number: 4 (lower is better)
Translates to: PELWASAGWAAPSGAAGAETVPW*RTPWQW
Trigger: CCATTGCCATGGGGTCCTTCACCATGGTACTGTCTC...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGCTTCTGAGCCAAACCTaGCGCCGCCCCGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLLLSQT*RRPALC
Trigger: GCAGAGAGCGGGGCGGCGGCAGGTTTGGCTCAGAAG...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGGCCAGGGCCCGGCTGTaGCGTCATGGACAGAACCTC +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRARARL*RHGQNL
Trigger: GAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGC...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGTCTCCTTCTCCTTCTTaGTGGCGCGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSSPSPS*WRAACR
Trigger: CCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGGAGA...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGTCTCCTTCTCCTTCTTaGTGGCGCGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRSPSPS*WRAACR
Trigger: CCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGGAGA...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGTGCCGCTCGCGCTCGTaGTGGTCGATGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLCRSRS*WSMLCT
Trigger: CGTGCACAACATCGACCAGCACGAGCGCGAGCGGCA...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCGTCCAGACGACTGTGTaGGCCGCCTGTACCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPVQTTV*AACTAA
Trigger: AGCCGCGGTACAGGCGGCGCACACAGTCGTCTGGAC...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGGCTCCTCCTGCGGCCTaGCATCCTGTCCAGACGACT +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLAPPAA*HPVQTT
Trigger: AGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGC...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCGCGGGTGGCTCCTCCTaGGGCCTGCCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERAGGSS*GLPSCP
Trigger: TGGACAGGATGGCAGGCCGCAGGAGGAGCCACCCGC...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: RWGGEAGISRALGLSGVGCTVIC*RSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCA...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRTCTVI*CRSSSA
Trigger: CGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGT...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CTGGGCGCCCTGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCCACAATCTCCACGCTaGACGCAGGCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LGALRLPLALVLVDVVHAPQSPR*TQAPPA
Trigger: TGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGG...GGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGGCTTGTCCTGATGGATaGTGGGAGCCACGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVACPDG*WEPRGW
Trigger: CCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGC...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGTTTGCACATTTCTCCTaGAAAGGCGCGTCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRFAHFS*KGASAG
Trigger: CCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAA...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCGAGGAACCTGGGATaGAAACCAGTGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGAARNLG*KPVFGA
Trigger: GGCCCCAAACACTGGTTTGCATCCCAGGTTCCTCGC...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGGCGAGGAACCTGGGATaGAAACCAGTGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRARNLG*KPVFGA
Trigger: GGCCCCAAACACTGGTTTGCATCCCAGGTTCCTCGC...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGTCCGTGGGACGGAGCTaGCTAGAGCAGCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLSVGRS*LEQPGK
Trigger: CTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCGTGGGACGGAGCTaGCTAGAGCAGCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVSVGRS*LEQPGK
Trigger: CTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCGGCTGCGGTCACTTACAGTCCCCGAGGCGCTCAGCGTCACGGCCCGCAGTCGCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PAAVTYSPRGAQRHGPQSRCPAG*HPSGWR
Trigger: CCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCG...CGACTGCGGGCCGTGACGCTGAGCGCCTCGGGGACTGTAAGTGACCGCAGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp GTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCGTCGCGTTCGGGCTTaGAGCTCAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: VERPSPPRLHGPAVQSPARRVRA*SSGGPR
Trigger: CCGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACG...GGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGGGTTGCTGCCTTCGCTaGGGAAGAAGATGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGGCCLR*GRRCSP
Trigger: TGGAGAGCATCTTCTTCCCCAGCGAAGGCAGCAACC...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGAGAAGAGGGAGCCACTaGCGCCCGGGTTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLRRGSH*RPGWTA
Trigger: AGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCT...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp AGCGGGGTGGGTCCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCCGCTCGCGCTCGTGCTaGTCGATGTTGTGCACGCCC +
Preference number: 4 (lower is better)
Translates to: SGVGPAASLAGDLRETEFRSRSC*SMLCTP
Trigger: GGGCGTGCACAACATCGACCAGCACGAGCGCGAGCG...GAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGGACCCACCCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTCCTGGATGGACTCCATaGCCGTGGAGTAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSPGWTP*PWSRAP
Trigger: AGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGG...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGGCTCGGCATAGAAGCTaGGGCGGTGGACGGACACCG +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRARHRS*GGGRTP
Trigger: CGGTGTCCGTCCACCGCCCCAGCTTCTATGCCGAGC...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCGCTCGGCATAGAAGCTaGGGCGGTGGACGGACACCG +
Preference number: 4 (lower is better)
Translates to: TISSPSPWPCGSEPGPAAARHRS*GGGRTP
Trigger: CGGTGTCCGTCCACCGCCCCAGCTTCTATGCCGAGC...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCCGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SRWLRGTELPRAAGEVVSRSLGI*LAEKAA
Trigger: CGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCG...GGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCATCCTCTTCCGCGGGTaGCTCCTCCTGCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERILFRG*LLLRPA
Trigger: GGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGAT...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCTGCGTCCTCCTCTTTaGGGACCACAATCTCCACGC +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQLRPPL*GPQSPR
Trigger: GCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAG...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCTCCTCCTGCGGCCTGCCATCCTGTCCAGACGACTGTGTGCGCCGCCTGTGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VAPPAACHPVQTTVCAACASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...ACAGGCGGCGCACACAGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGCCACCGCGAACAGCCTaGCTTCTTCCTCAGGACACA +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSPPRTA*LLPQDT
Trigger: TGTGTCCTGAGGAAGAAGCCAGGCTGTTCGCGGTGG...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGTCCGCTTCCCACGTaGATGGAGGCAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSGPLPT*MEAELL
Trigger: GAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACC...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTAGTGGCCGCAGTGCTTaGCAGGGCGAGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSSGRSA*QGEGCP
Trigger: GGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACT...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTCTCCGCCAGCGTGGGTaGCAGCCTGGGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSLRQRG*QPGEEE
Trigger: CTCCTCTTCCCCAGGCTGCCACCCACGCTGGCGGAG...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGATCCTGGGCACATCTTaGAAGTGGGGGATTCCCACA +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRILGTS*KWGIPT
Trigger: TGTGGGAATCCCCCACTTCCAAGATGTGCCCAGGAT...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGTGGGGACCTCGGGGATaGGTCCGGCTTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRWGPRG*VRLLHS
Trigger: GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCA...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCGGGGGCTGATGGGTaGATGCCCGGTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGAGADG*MPGASR
Trigger: TCTGCTGGCACCGGGCATCCACCCATCAGCCCCCGC...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCGTGGCCTCTGGGGGTTaGGCCTTTGAGATGACAATG +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSVASGG*AFEMTM
Trigger: CATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCAC...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGTACAGACTTCTATCATaGGGGACAGCGGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQYRLLS*GTAGWV
Trigger: GACCCACCCCGCTGTCCCCCATGATAGAAGTCTGTA...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGAAAATGGGACTGGGTTaGGGACAGGCGGAGCGATTG +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQKMGLG*GQAERL
Trigger: CAATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTT...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCATGGAGTGGCATCCCTaGGGGGAGTTAAGACACACG +
Preference number: 4 (lower is better)
Translates to: WGGEAGISRALGLSGVGSMEWHP*GELRHT
Trigger: CGTGTGTCTTAACTCCCCCCAGGGATGCCACTCCAT...GCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCGGCCAGGTGGGTGCATaGGGACCCCAGAGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: VERPSPPRLHGPAVQSPAGQVGA*GPQRRQ
Trigger: TTGGCGCCTCTGGGGTCCCCATGCACCCACCTGGCC...GGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp GTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTGGGCTCGCTGGGGTCTaGCCGGGGTCCGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VTAASAEALSRGDTPALGGLAGV*PGSEAD
Trigger: GTCTGCTTCGGACCCCGGCCAGACCCCAGCGAGCCC...ACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGGGGCTCGCTGGGGTCTaGCCGGGGTCCGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VWRDHLLPVSMALRFRARGLAGV*PGSEAD
Trigger: GTCTGCTTCGGACCCCGGCCAGACCCCAGCGAGCCC...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTGGCACGGCTTCGCGGTaGCTGGCTTCCCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PEDLTATWGPCGVPGGPPGTASR*LASRWL
Trigger: GAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGTGCC...AGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CTGGGCGCCCTGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCGCCACCTGGGACCACTaGTCACAGAGCTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGALRLPLALVLVDVVHAATWDH*SQSWGR
Trigger: TCTTCCCCAGCTCTGTGACCAGTGGTCCCAGGTGGC...GGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
3UTR CAA 72 bp GATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTaGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: DGRGVTAASAEA*SRGDTPALGLR
Trigger: GCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGACTCGTCGTCGCTGGTaGCGTAGAAGAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLTRRRW*RRRGSH
Trigger: GTGGCTCCCTCTTCTACGTCACCAGCGACGACGAGT...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCATCCGCGGGTTCTGGTTaGGGTTCATGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGASAGSG*GSCSSQ
Trigger: CTGGCTACTACATGAACCTCAACCAGAACCCGCGGA...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGCGGGCATGTCCTGCATaGAGTCCAGGTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RWLASRWLRGTELPRAAGRACPA*SPGPCR
Trigger: CCTACAAGGACCTGGACTTCATGCAGGACATGCCCG...CCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAAAGGCCGCTTCTCATCTaGGGTGCTCTGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIERPLLI*GALGAL
Trigger: CAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCT...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGCTCCATGCCAGTTGCTaGGTGGCCTACGTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ISRALGLSGVGSAFGGSRLHASC*VAYVGR
Trigger: TCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAG...CCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp AGCGGGGTGGGTCCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCCCCGGTGCCAGCAGATaGGCACCAGGCTGTGAACTG +
Preference number: 4 (lower is better)
Translates to: SGVGPAASLAGDLRETEFPGASR*APGCEL
Trigger: CAGTTCACAGCCTGGTGCTCATCTGCTGGCACCGGG...GAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGGACCCACCCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACTTACAGTCCCCGAGGCGCTCAGCGTCACGGCCCGCAGTCGGCGATGGCGGGCAGCTGTGCACCTGGTaGTGGTGCTGCCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: HLQSPRRSASRPAVGDGGQLCTW*WCCPME
Trigger: CTCCATAGGGCAGCACCATCACCAGGTGCACAGCTG...CCCGCCATCGCCGACTGCGGGCCGTGACGCTGAGCGCCTCGGGGACTGTAAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR GCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAACTTCTGAGCCAAACCTaGCGCCGCCCCGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIELLSQT*RRPALC
Trigger: GCAGAGAGCGGGGCGGCGGCAGGTTTGGCTCAGAAG...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGGGTGGTTTCGCCGGATaGGTCCACACCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLGGFAG*VHTSMA
Trigger: GGCCATCGAGGTGTGGACGCATCCGGCGAAACCACC...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTAGGTCGAACTTGAGGTaGATCTTGACCACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSRSNLR*ILTTRG
Trigger: GCCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCT...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTCCCTCGGGCATGTCCTaGATGAAGTCCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSPSGMS*MKSRSL
Trigger: CAAGGACCTGGACTTCATGCAGGACATGCCCGAGGG...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRASHLR*SGRPAP
Trigger: AGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGC...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGAGGGCCTTCCAGGTGTaGTCCAGTTTCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARRAFQV*SSFLMN
Trigger: GTTCATCAAGAAACTGGAGCACACCTGGAAGGCCCT...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCGTCCAGACGACTGTGTaGGCCGCCTGTACCGCGGCT +
Preference number: 4 (lower is better)
Translates to: VERPSPPRLHGPAVQSPAVQTTV*AACTAA
Trigger: AGCCGCGGTACAGGCGGCGCACACAGTCGTCTGGAC...GGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGCTVIC*RSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCA...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCTCTGGGTCGGGGGCTaGATAGAAATTATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGLWVGG*IEIMCR
Trigger: GCGACACATAATTTCTATGCAGCCCCCGACCCAGAG...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTAGAAAACGTCTCCGTTaGCTGGGCCCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSRKRLR*LGPPCQ
Trigger: CTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCCTGCGGCTCCCTGCTaGCCGAGGGGCACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMAPAAPC*PRGTAP
Trigger: AGGGGCAGTGCCCCTCGGGCAGCAGGGAGCCGCAGG...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTCCTGCGGCTCCCTGCTaGCCGAGGGGCACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RFDVGPNDIPSDACSPAPPAAPC*PRGTAP
Trigger: AGGGGCAGTGCCCCTCGGGCAGCAGGGAGCCGCAGG...AGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CGCTGGGGTCTGGCCGGGGTCCGAAGCAGACCCTGGGCCTCAGCTGTGCACCTGACGGGCAGCCAGGTCTaGACGAGTGAGAAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: RWGLAGVRSRPWASAVHLTGSQV*TSEKRP
Trigger: TGGACGCTTCTCACTCGTGCAGACCTGGCTGCCCGT...CAGGTGCACAGCTGAGGCCCAGGGTCTGCTTCGGACCCCGGCCAGACCCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGTTCAGAGCCCGGCCCTaGAGCCACTCTGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLFRARP*SHSADL
Trigger: CAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAA...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCCGGAAGTCCTGGAAGTaGTGGGCGGGGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TISSPSPWPCGSEPGPAARKSWK*WAGVRL
Trigger: CAACCTCACCCCCGCCCACCACTTCCAGGACTTCCG...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCCTTCTCCTTCTTGCTaGCGCGCCGCTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLPSPSC*RAACRW
Trigger: CCACCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGG...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCCCAGGTCCTTGTAGGTaGGGAAGCTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSPGPCR*GSSSPS
Trigger: AGAAGGAGAAGAGCTTCCCCACCTACAAGGACCTGG...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGTGGACTCCATGGCCGTaGAGTAGAGCGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLWTPWP*SRAPSG
Trigger: GCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCA...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAACGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIERSLGI*LAEKAA
Trigger: CGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCG...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGGAATGGAGAGGGATGTaGATGACAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PGRRHPCRGRTRSGGAAREWRGM*MTESWQ
Trigger: TTGCCACGACTCTGTCATCCACATCCCTCTCCATTC...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGGACCGCTCAGGAATaGAGAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGGTAQE*RGMWMT
Trigger: TGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCC...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCATCCTCTTCCGCGGGTaGCTCCTCCTGCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVILFRG*LLLRPA
Trigger: GGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGAT...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCTCCTCGTCTGAGGCCTaGCTGGCAGTTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSSSSEA*LAVSTS
Trigger: TGAAGTAGAAACTGCCAGCCAGGCCTCAGACGAGGA...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTGAGGACGAGGTCCGGTaGGGCGGCGAGGCGGGCATC +
Preference number: 4 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAEDEVR*GGEAGI
Trigger: GATGCCCGCCTCGCCGCCCCACCGGACCTCGTCCTC...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGAACCAAAGAGTGCAGTaGGCAGGGGCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGNQRVQ*AGALLP
Trigger: AGGGAGAAGAGCCCCTGCCCACTGCACTCTTTGGTT...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGCTGGCCCTCCAGCTGTaGTGGGTCTGGATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRLALQL*WVWIGG
Trigger: GCCTCCAATCCAGACCCACCACAGCTGGAGGGCCAG...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTCCTTCCGCCCTGAGCTaGTCTCCTGTGGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSPSALS*SPVAQG
Trigger: GCCTTGGGCCACAGGAGACCAGCTCAGGGCGGAAGG...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCCCTTCCGCCCTGAGCTaGTCTCCTGTGGCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERPSALS*SPVAQG
Trigger: GCCTTGGGCCACAGGAGACCAGCTCAGGGCGGAAGG...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGGCTGAGTCCCACCACTaGGAGCGCTGCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRAESHH*ERCPLG
Trigger: TCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGC...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGGCTGAGTCCCACCACTaGGAGCGCTGCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRAESHH*ERCPLG
Trigger: TCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGC...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGGACTCTGCCGAGCTCTaGCCTCCAACCAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRDSAEL*PPTSTL
Trigger: GAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTC...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTTGGGGACCTCGGGGATaGGTCCGGCTTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSWGPRG*VRLLHS
Trigger: GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCA...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGGAGGGGCTGCTCTCGTaGAGTGTGTGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPREGLLS*SVCPRW
Trigger: CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTC...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCGACTCGAGGACTCCCTaGGAGGACTGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPDSRTP*EDWCGL
Trigger: GAGGCCACACCAGTCCTCCCAGGGAGTCCTCGAGTC...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGCGTCGGCCGGGCACTaGTGTCCCGTGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSASAGH*CPVSLS
Trigger: GCTGAGTGACACGGGACACCAGTGCCCGGCCGACGC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCGCGTCGGCCGGGCACTaGTGTCCCGTGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: RPPALSCHGENVSVAWALASAGH*CPVSLS
Trigger: GCTGAGTGACACGGGACACCAGTGCCCGGCCGACGC...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGTACAGACTTCTATCATaGGGGACAGCGGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQYRLLS*GTAGWV
Trigger: GACCCACCCCGCTGTCCCCCATGATAGAAGTCTGTA...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGACCCAGGAGGGGAAGTaGGCATTGGTCACCAAGGTA +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQTQEGK*ALVTKV
Trigger: TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGT...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCTGGCAGGAGACACATaGAAGTTTCCGCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GGHLPSSGPQRGGQRLRGLAGDT*KFPPCQ
Trigger: CTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAG...CCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGAGATGAGGAGGAGGTaGCAGGCGCCTCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEEMRRR*QAPLLG
Trigger: CCCCAGGAGAGGCGCCTGCCACCTCCTCCTCATCTC...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAAAAATGGGACTGGGTTaGGGACAGGCGGAGCGATTG +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGAKMGLG*GQAERL
Trigger: CAATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTT...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAATGGAGTGGCATCCCTaGGGGGAGTTAAGACACACG +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGAMEWHP*GELRHT
Trigger: CGTGTGTCTTAACTCCCCCCAGGGATGCCACTCCAT...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGATGCAAACCAGTGTTTaGGGCCAGGAGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRMQTSV*GQEWLY
Trigger: ATACAGCCACTCCTGGCCCCAAACACTGGTTTGCAT...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGATGGTGCTGCCCTATaGAGCGCCCGGTTCGACGTG +
Preference number: 4 (lower is better)
Translates to: TASRWLASRWLRGTELPRDGAAL*SARFDV
Trigger: CACGTCGAACCGGGCGCTCCATAGGGCAGCACCATC...TCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACCAGAGAGGGGCTCGCTaGGGTCTGGCCGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: PGDGAALWSARFDVGPNDQRGAR*GLAGVR
Trigger: TCGGACCCCGGCCAGACCCCAGCGAGCCCCTCTCTG...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTACGTGGGGCCCATGTaGCGTCCCAGGGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVYVGPM*RPRGTS
Trigger: GGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTA...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCCGTAGAAGTCCTGCATaGGCACGTCGCGTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVRRSPA*ARRVRA
Trigger: AGCCCGAACGCGACGTGCTCATGCAGGACTTCTACG...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGCAGGTGCATAGGTCTTaGAGCGGAAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRQVHRS*SGSPGS
Trigger: ACTTCCAGGACTTCCGCTTCAAGACCTATGCACCTG...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGCAGGATGTTGTTCATaGCCACGACGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGAGCCS*PRRGCS
Trigger: AGAACATCCGCGTCGTGGTCATGAACAACATCCTGC...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGCCGCTTCTCATCTaGGGTGCTCTGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSRPLLI*GALGAL
Trigger: CAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCT...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGGCCGCTTCTCATCTaGGGTGCTCTGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGRPLLI*GALGAL
Trigger: CAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCT...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCCGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERREHSC*VAAVLG
Trigger: GCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCG...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGCACCAGGCTGTGAACTaGGGCCAAGGTCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRHQAVN*GQGRFP
Trigger: TGGGAAGCGACCTTGGCCTCAGTTCACAGCCTGGTG...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCCGGTGCCAGCAGATaGGCACCAGGCTGTGAACTG +
Preference number: 4 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFPGASR*APGCEL
Trigger: CAGTTCACAGCCTGGTGCTCATCTGCTGGCACCGGG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGTCACGGCCCGCAGTCGGCGATGGCGGGGAGAGTAAATCCAGTACCTCCCATCACAGAGGACAGCGGATaGGGCGGCCACCCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: RHGPQSAMAGRVNPVPPITEDSG*GGHPRG
Trigger: ACCACGGGGGTGGCCGCCTCATCCGCTGTCCTCTGT...GATGGGAGGTACTGGATTTACTCTCCCCGCCATCGCCGACTGCGGGCCGTGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR TCA 90 bp ATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGAGCAGTACCTCCCATCCGTaGACTGGACGGGGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: ISQLRGAHVASQGDLLESSTSHP*TGRGGP
Trigger: CGGCCCGCCCCGTCCAGTTCACGGATGGGAGGTACT...GCTCTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR GCA 90 bp TCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCACTCTGCTGACCTGTGCCCACGGTGTAGCCGATaGCCAGCTGGATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SMALRFRARPCSHSADLCPRCSR*PAGWHP
Trigger: AGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGG...GCACAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGAACTCGGCCTCCTTGTaGATGACGGTCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQNSASL*MTVLMM
Trigger: CATCATCAAGACCGTCATGCACAAGGAGGCCGAGTT...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCTGCTGGTCGATGTTGTaGACGCCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLCWSML*TPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCA...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: QALRISQLRGAHVASQGDASHLR*SGRPAP
Trigger: AGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGC...GTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGAGGGCCTTCCAGGTGTaGTCCAGTTTCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQRAFQV*SSFLMN
Trigger: GTTCATCAAGAAACTGGAGCACACCTGGAAGGCCCT...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCACGAGTGAGAAGCGTCCACCCAAGACACCCTGACACGAGAGGGCTGGGTCCACGCCTGTACCGCGGCTaGTCCGACGTCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARVRSVHPRHPDTRGLGPRLYRG*SDVSEG
Trigger: CCCCTCGGAGACGTCGGAGCAGCCGCGGTACAGGCG...TGGACCCAGCCCTCTCGTGTCAGGGTGTCTTGGGTGGACGCTTCTCACTCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCACGCCTGTACCGCGGCTaGTCCGACGTCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SALWIVTHQTTGRRNGVARLYRG*SDVSEG
Trigger: CCCCTCGGAGACGTCGGAGCAGCCGCGGTACAGGCG...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: EAGISRALGLSGVGSAFGCTVIC*RSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCA...CCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQTCTVI*CRSSSA
Trigger: CGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGT...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RWLASRWLRGTELPRAAGHAGST*TVICCR
Trigger: TCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTG...CCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGGCGTCAGGGCCCCACTaGGGCGGGAACATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWASGPH*GGNIAA
Trigger: AGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGC...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATTCTTGGCGTCTCTGGTaGCAGGGCTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDSWRLW*QGSGQG
Trigger: GCCCTGCCCAGAGCCCTGGCACCAGAGACGCCAAGA...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGATTATAAATAGGTCTTaGCGTCCTCCTGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQIINRS*RPPAPA
Trigger: GGCGGGGGCAGGAGGACGGCAAGACCTATTTATAAT...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAATTATAAATAGGTCTTaGCGTCCTCCTGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RASPELWASAGWAAPSGAIINRS*RPPAPA
Trigger: GGCGGGGGCAGGAGGACGGCAAGACCTATTTATAAT...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTGCCCCGTTCTGGCTGTaGGGTGCTGGGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PEDLTATWGPCGVPGGPPAPFWL*GAGQVS
Trigger: AGAGACCTGCCCAGCACCGCACAGCCAGAACGGGGC...AGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VTAASAEALSRGDTPALGPNFFP*PGPGCA
Trigger: GGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGG...ACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VWRDHLLPVSMALRFRARPNFFP*PGPGCA
Trigger: GGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGG...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CGCTGGGGTCTGGCCGGGGTCCGAAGCAGACCCTGGGCCTCAGCTGTGCACCTGGCGTCCACACCTCGATaGCCCAACTTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: RWGLAGVRSRPWASAVHLASTPR*PNFFPW
Trigger: CCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGC...CAGGTGCACAGCTGAGGCCCAGGGTCTGCTTCGGACCCCGGCCAGACCCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGTGGTCTTCTTGTAGGTaGTTTCGCCGGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQWSSCR*FRRMRP
Trigger: TGGACGCATCCGGCGAAACCACCTACAAGAAGACCA...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGCGTCGCGTTCGGGCTTaGAGCTCAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: TWDRMTFPVTHAAQRLVRRRVRA*SSGGPR
Trigger: CCGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACG...CCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGCGGAAGTCCTGGAAGTaGTGGGCGGGGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SPAKARRPGTGVPCHSAERKSWK*WAGVRL
Trigger: CAACCTCACCCCCGCCCACCACTTCCAGGACTTCCG...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCACAGCCCATAGAACTTaGGCAGCAGCGTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: TISSPSPWPCGSEPGPAATAHRT*AAASAG
Trigger: ACCCGCGGACGCTGCTGCCCAAGTTCTATGGGCTGT...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTCGCTCGCGCTCGTGCTaGTCGATGTTGTGCACGCCC +
Preference number: 4 (lower is better)
Translates to: GSVGRSCLEQPGKWSPPLRSRSC*SMLCTP
Trigger: GGGCGTGCACAACATCGACCAGCACGAGCGCGAGCG...AAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACGGCTTCGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGACCTGGATGGACTCCATaGCCGTGGAGTAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: TASRWLASRWLRGTELPRPGWTP*PWSRAP
Trigger: AGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGG...TCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGTCATCCGATTCGATaGCCTCCCCGCGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEECHPIR*PPRARR
Trigger: GCGCCGCGCGCGGGGAGGCCATCGAATCGGATGACA...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCCGCCGCGCCCCTTCTTaGAGGGCGAGGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCRRAPS*RARTSG
Trigger: CCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCG...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCCGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSRSLGI*LAEKAA
Trigger: CGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCG...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCATCCTCTTCCGCGGGTaGCTCCTCCTGCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCILFRG*LLLRPA
Trigger: GGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGAT...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGAGCATCCTCTTCCGCGGGTaGCTCCTCCTGCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ISQLRGAHVASQGDLLESILFRG*LLLRPA
Trigger: GGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGAT...GCTCTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGCTGCGTCCTCCTCTTTaGGGACCACAATCTCCACGC +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVLRPPL*GPQSPR
Trigger: GCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAG...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCGAAAGTAGATGTCGGTaGCGGGCGCGTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPESRCR*RARPPR
Trigger: ACGAGGAGGACGCGCCCGCCACCGACATCTACTTTC...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335312.8
ENST00000679828.1
CDS-3UTR CCA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGGAAAGTAGATGTCGGTaGCGGGCGCGTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRESRCR*RARPPR
Trigger: ACGAGGAGGACGCGCCCGCCACCGACATCTACTTTC...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGCGCTTCCCACGTGGATaGAGGCAGAGTTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRRFPRG*RQSCSG
Trigger: TCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCG...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGCAGCTGTGGTGGGTCTaGATTGGAGGCGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRQLWWV*IGGARG
Trigger: ACCTCTGGCGCCTCCAATCCAGACCCACCACAGCTG...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGCTGAGTGGCCTACGTTaGAAGAGAAGGACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: ARRASPELWASAGWAAPSLSGLR*KRRTSP
Trigger: GGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAG...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGACTCTGCCGAGCTCTaGCCTCCAACCAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGDSAEL*PPTSTL
Trigger: GAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTC...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAATGGGGAAGGGCAGGGTaGGTGACTCTGCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIEWGRAG*VTLPSS
Trigger: AGAGCTCGGCAGAGTCACCCACCCTGCCCTTCCCCA...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCTCCTCCTGCGGCCTGCCATCCTGTCCAGACGACTGTGTGCGCCGCCTGTTGGGGAAGGGCAGGGTaGGTGACTCTGCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VAPPAACHPVQTTVCAACWGRAG*VTLPSS
Trigger: AGAGCTCGGCAGAGTCACCCACCCTGCCCTTCCCCA...ACAGGCGGCGCACACAGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp GTGGCTCCTCCTGCGGCCTGCCATCCTGTCCAGACGACTGTGTGCGCCGCCTGTAGTGTGTGTCCTCGCTaGGGACCTCGGGGATGGGTC +
Preference number: 4 (lower is better)
Translates to: VAPPAACHPVQTTVCAACSVCPR*GPRGWV
Trigger: GACCCATCCCCGAGGTCCCCAGCGAGGACACACACT...ACAGGCGGCGCACACAGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGGTGGCCTCTGGGGGTTaGGCCTTTGAGATGACAATG +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWVASGG*AFEMTM
Trigger: CATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCAC...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCGTCGCTGGTGACGTAGAAGAGGGAGCCACTGGCGCCCGGGTTGGACAGCTCCACCCCACAGGCTCTTaGCGTCTCTGGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VVAGDVEEGATGARVGQLHPTGS*RLWCQG
Trigger: GCCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTG...GAGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCTACGTCACCAGCGACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGGGGGACGTGTCGGGATaGCGTAGGGGGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGGDVSG*RRGTEP
Trigger: AGGCTCTGTCCCCCTACGCCATCCCGACACGTCCCC...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGAGGAAGGAAAACAGAGGACAGCGGATGAGGCGGCCACCCCCGTGGTCGGGGTGGCGGGGAGCAGGTaGGGACAGCTGACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: EEEGKQRTADEAATPVVGVAGSR*GQLTAK
Trigger: CTTGGCAGTCAGCTGTCCCCACCTGCTCCCCGCCAC...CCCGACCACGGGGGTGGCCGCCTCATCCGCTGTCCTCTGTTTTCCTTCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp GAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGTCCGAAGCAGACCCTaGGCCTCAGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: ETISSPSPWPCGSEPGPAVRSRP*ASAVHL
Trigger: CAGGTGCACAGCTGAGGCCCAGGGTCTGCTTCGGAC...TGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCGTCCGAAGCAGACCCTaGGCCTCAGCTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: VERPSPPRLHGPAVQSPAVRSRP*ASAVHL
Trigger: CAGGTGCACAGCTGAGGCCCAGGGTCTGCTTCGGAC...GGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGACACGAGAGGGCTaGGTCCAGGGGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VTAASAEALSRGDTPALGLTREG*VQGQRG
Trigger: CCCTCTCTGCCCCTGGACCCAGCCCTCTCGTGTCAG...ACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGAAAACAGAGGACAGCGGATGAGGCGGCCACCCCCGTGGTCGGGTGGGAGAGGGAGCAGCCGGGGAAGTaGTCTCCACCTCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GKQRTADEAATPVVGWEREQPGK*SPPLGV
Trigger: GACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTC...CCTCTCCCACCCGACCACGGGGGTGGCCGCCTCATCCGCTGTCCTCTGTTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGTGGCTGGCTTCCCGCTaGCTCCGTGGGACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RISQLRGAHVASQGDLLEWLASR*LRGTEL
Trigger: CAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCA...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CAA 72 bp TCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTaGGGTCTGCGCCCCGTTCTGGCTGTGCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SAEALSRGDTPA*GLRPVLAVRCW
Trigger: CCAGCACCGCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTACTCGTCGTCGCTGGTaGCGTAGAAGAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GPEDLTATWGPCGVPGGPTRRRW*RRRGSH
Trigger: GTGGCTCCCTCTTCTACGTCACCAGCGACGACGAGT...AGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTACTCGTCGTCGCTGGTaGCGTAGAAGAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSTRRRW*RRRGSH
Trigger: GTGGCTCCCTCTTCTACGTCACCAGCGACGACGAGT...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGTCCGCGGGTTCTGGTTaGGGTTCATGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVSAGSG*GSCSSQ
Trigger: CTGGCTACTACATGAACCTCAACCAGAACCCGCGGA...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACAGGCCGCTTCTCATCTaGGGTGCTCTGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGDGAALWSARFDVGPNDRPLLI*GALGAL
Trigger: CAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCT...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGCTCCATGCCAGTTGCTaGGTGGCCTACGTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVLHASC*VAYVGR
Trigger: TCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAG...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGGAGGCCGACGGGACGTaGACAGCGGGTGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGEADGT*TAGGVA
Trigger: CGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTC...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGCACGTGGGCTTGTCCTaGTGGATGCTGGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWHVGLS*WMLGAT
Trigger: CGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTG...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTACTGACGTCAGACACTaGGCTTCCGGCCGGGGACCT +
Preference number: 4 (lower is better)
Translates to: GSHGGLGGGFVSRGHSCFTDVRH*ASGRGP
Trigger: AGGTCCCCGGCCGGAAGCTCAGTGTCTGACGTCAGT...AAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACCCACCCAAGACACCCTaGCACGAGAGGGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PGDGAALWSARFDVGPNDPPKTP*HERAGS
Trigger: GGACCCAGCCCTCTCGTGTCAGGGTGTCTTGGGTGG...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTCTGCAGCCACTCTGCTaGCCTGTGCAACCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PEDLTATWGPCGVPGGPPLQPLC*PVQPPL
Trigger: CAGGGGAGGTTGCACAGGTCAGCAGAGTGGCTGCAG...AGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCGGTGGTTTCGCCGGATaGGTCCACACCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: RPPALSCHGENVSVAWALGGFAG*VHTSMA
Trigger: GGCCATCGAGGTGTGGACGCATCCGGCGAAACCACC...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGAACTCGGCCTCCTTGTaGATGACGGTCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: RGGHLPSSGPQRGGQRLRNSASL*MTVLMM
Trigger: CATCATCAAGACCGTCATGCACAAGGAGGCCGAGTT...CCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGAAAACAGAGGACAGCGGATGAGGCGGCCACCCCCGTGGTCGGGTGGGAGAGGCCAGGGAGCAGCTTCTaGAGGAACTCGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GKQRTADEAATPVVGWERPGSSF*RNSASL
Trigger: CAAGGAGGCCGAGTTCCTGCAGAAGCTGCTCCCTGG...CCTCTCCCACCCGACCACGGGGGTGGCCGCCTCATCCGCTGTCCTCTGTTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATCGACGCGGATGTTCTTaGCCCCCGACTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDRRGCS*PPTARS
Trigger: ACTGCGTGCAGTCGGGGGGCAAGAACATCCGCGTCG...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGCCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGACCAGGCAGTCCCGCTaGAGCGTCTTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: CLAHRGARRGLLMGGESRTRQSR*SVLTRA
Trigger: CGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGT...CCGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCATGCTGGTCGATGTTGTaGACGCCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ETISSPSPWPCGSEPGPACWSML*TPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCA...TGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDASHLR*SGRPAP
Trigger: AGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGC...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CAGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCAGCTCCTCCTGCGGCCTaGCATCCTGTCCAGACGACT +
Preference number: 4 (lower is better)
Translates to: QGSRGLSASICEVGVERPAPPAA*HPVQTT
Trigger: AGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGC...TGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTGCGGGTGGCTCCTCCTaGGGCCTGCCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAAGGSS*GLPSCP
Trigger: TGGACAGGATGGCAGGCCGCAGGAGGAGCCACCCGC...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCACTCTGCTGACCTGTGCCCACAATCTCCACGCTaGACGCAGGCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SMALRFRARPCSHSADLCPQSPR*TQAPPA
Trigger: TGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGG...GCACAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGGTGCTTCCGTCTCTGTaGCAAATAAGGACTCAAATG +
Preference number: 4 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRVLPSL*QIRTQM
Trigger: CATTTGAGTCCTTATTTGGCACAGAGACGGAAGCAC...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGTGCTTCCGTCTCTGTaGCAAATAAGGACTCAAATG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAVLPSL*QIRTQM
Trigger: CATTTGAGTCCTTATTTGGCACAGAGACGGAAGCAC...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCAAAACACAGAGCCCTaGCTGGGAGGTTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFQNTEP*LGGSPA
Trigger: GGCCGGAGAACCTCCCAGGCAGGGCTCTGTGTTTTG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCAATGCCCCTGTCCCTaGTGGCCATCCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RPPALSCHGENVSVAWALQCPCP*WPSRSQ
Trigger: CTGGGACCTGGATGGCCAGCAGGGACAGGGGCATTG...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCACGGGGCCACACCTGCTaGTCCGAGTCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SALWIVTHQTTGRRNGVARGHTC*SESPHR
Trigger: CCTGTGGGGTGACTCGGAGCAGCAGGTGTGGCCCCG...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCCTGCCCGAGGGGCACTaGCCCTTCTCCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLLPEGH*PFSPGW
Trigger: CCACCCTGGGGAGAAGGGGCAGTGCCCCTCGGGCAG...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGACGGGCAGCCAGGTCTaGACGAGTGAGAAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SERFADGRGVTAASAEALTGSQV*TSEKRP
Trigger: TGGACGCTTCTCACTCGTGCAGACCTGGCTGCCCGT...CAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGAGGTGTGCAACCTCCCCTGTaGAGCCAGCGGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: GKWSPPLGVTPQCLAHRGVQPPL*SQRGHG
Trigger: CCCGTGGCCCCGCTGGCTGCACAGGGGAGGTTGCAC...ACCTCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCGTCTCCATGGCCCTaGGGTTCAGAGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRGLSASICEVGVERPSPPSPWP*GSEPGP
Trigger: AGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGG...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTGGGGTCACTCCACAGTaGCTGGCACACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GPEDLTATWGPCGVPGGPGVTPQ*LAHRGA
Trigger: AGCACCTCTGTGTGCCAGGCACTGTGGAGTGACCCC...AGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCGCGTCCACACCTCGATaGCCCAACTTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVASTPR*PNFFPW
Trigger: CCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGC...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGTGGTCTTCTTGTAGGTaGTTTCGCCGGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWWSSCR*FRRMRP
Trigger: TGGACGCATCCGGCGAAACCACCTACAAGAAGACCA...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGAAGTCCTGGAAGTGGTaGGCGGGGGTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SERFADGRGVTAASAEALKSWKW*AGVRLL
Trigger: CAGCAACCTCACCCCCGCCCACCACTTCCAGGACTT...CAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCATCAGCAAACCTCTCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGCGGAAGTCCTGGAAGTaGTGGGCGGGGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWRKSWK*WAGVRL
Trigger: CAACCTCACCCCCGCCCACCACTTCCAGGACTTCCG...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCGGAAGTCCTGGAAGTaGTGGGCGGGGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VWRDHLLPVSMALRFRARRKSWK*WAGVRL
Trigger: CAACCTCACCCCCGCCCACCACTTCCAGGACTTCCG...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCACCTTCTCCTTCTTGCTaGCGCGCCGCTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ETISSPSPWPCGSEPGPAPSPSC*RAACRW
Trigger: CCACCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGG...TGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGAGCCGCTCGCGCTCGTGCTaGTCGATGTTGTGCACGCCC +
Preference number: 4 (lower is better)
Translates to: ISQLRGAHVASQGDLLESRSRSC*SMLCTP
Trigger: GGGCGTGCACAACATCGACCAGCACGAGCGCGAGCG...GCTCTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCCGCTCGCGCTCGTGCTaGTCGATGTTGTGCACGCCC +
Preference number: 4 (lower is better)
Translates to: TPASSSLGTTISTLHAGSRSRSC*SMLCTP
Trigger: GGGCGTGCACAACATCGACCAGCACGAGCGCGAGCG...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp TCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SAPPSVRWVWRDHLLPVSSSEVL*APCACR
Trigger: GCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGA...GGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCGCCCCGTTCTGGCTGTGCTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LCLEGTLLLWVCAPFWLCSSEVL*APCACR
Trigger: GCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGA...GCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAACCTGGATGGACTCCATaGCCGTGGAGTAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIEPGWTP*PWSRAP
Trigger: AGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGG...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCGCGCGGCGCCACCCTaGATGGACTCCATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MTTAGPEDLTATWGPCGVRAAPP*MDSMAV
Trigger: CACGGCCATGGAGTCCATCCAGGGTGGCGCCGCGCG...GACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCCGCGCGGCGCCACCCTaGATGGACTCCATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLRAAPP*MDSMAV
Trigger: CACGGCCATGGAGTCCATCCAGGGTGGCGCCGCGCG...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTACCGTGTCCCCATCGTaGACGAGGGCCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSHGGLGGGFVSRGHSCFTVSPS*TRAFQV
Trigger: CACCTGGAAGGCCCTCGTCCACGATGGGGACACGGT...AAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAAGCTCGGCATAGAAGCTaGGGCGGTGGACGGACACCG +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEEARHRS*GGGRTP
Trigger: CGGTGTCCGTCCACCGCCCCAGCTTCTATGCCGAGC...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGCGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RISQLRGAHVASQGDLLERSLGI*LAEKAA
Trigger: CGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCG...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTCGTCTGAGGCCTGGCTaGCAGTTTCTACTTCAACAG +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSRLRPG*QFLLQQ
Trigger: CTGTTGAAGTAGAAACTGCCAGCCAGGCCTCAGACG...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTTCCTCGTCTGAGGCCTaGCTGGCAGTTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSSSSEA*LAVSTS
Trigger: TGAAGTAGAAACTGCCAGCCAGGCCTCAGACGAGGA...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCTGGGCCTCAGCGGGGTaGGCAGCGCCTTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTWASAG*AAPSGA
Trigger: TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCA...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTCCCTCTGCAGGCCGATaGGGCCCCCGGGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRPSAGR*GPRGSG
Trigger: ACCTGAGCCCCGGGGGCCCCATCGGCCTGCAGAGGG...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CTGGGCGCCCTGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCTGAGTGGCCTACGTTaGAAGAGAAGGACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGALRLPLALVLVDVVHALSGLR*KRRTSP
Trigger: GGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAG...GGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCAGGGCGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGGGAGCGCTGCCCTCTTaGAGGGTGATGAGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRGALPS*RVMSRK
Trigger: TTTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCC...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGATCCTGGGCACATCTTaGAAGTGGGGGATTCCCACA +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWILGTS*KWGIPT
Trigger: TGTGGGAATCCCCCACTTCCAAGATGTGCCCAGGAT...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGACGTGAACAGCGGGTaGCGTGGCGTCATACGGAGG +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSDVNSG*RGVIRR
Trigger: CCTCCGTATGACGCCACGCCACCCGCTGTTCACGTC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCGTCGCTGGTGACGTAGAAGAGGGAGCCACTGGCGCCCGGGTTGGACAGCTCTGCCCCTGTCCCTGCTaGCCATCCAGGTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: VVAGDVEEGATGARVGQLCPCPC*PSRSQT
Trigger: TGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCA...GAGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCTACGTCACCAGCGACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGCCTCGGCACAGTCAGTaGAGCACGTCAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGPRHSQ*STSASV
Trigger: AACCGAGGCTGACGTGCTCCACTGACTGTGCCGAGG...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGGTTTGGGGCCAGGAGTaGCTGTATGGTTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVVWGQE*LYGFRG
Trigger: GCCTCTGAAACCATACAGCCACTCCTGGCCCCAAAC...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGCGATGGCGGGGAGAGTAAATCCAGTACCTCCCATCCGTGAACTGGACGGGCTCCCATCCGTGAACTaGACGGGGCGGGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SAMAGRVNPVPPIRELDGLPSVN*TGRAGW
Trigger: CCACCCGGCCCGCCCCGTCCAGTTCACGGATGGGAG...CCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCCCGCCATCGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp GGGAGAGTAAATCCAGTACCTCCCATCCGTGAACTGGACGGGGCGGGCCGGGTGGGTCCGGGGCCAGCGTaGCTGACCTCAATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GRVNPVPPIRELDGAGRVGPGPA*LTSIAA
Trigger: GGCTGCAATTGAGGTCAGCCACGCTGGCCCCGGACC...CACCCGGCCCGCCCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACGGTCCGGGGCCAGCGTaGCTGACCTCAATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGDGAALWSARFDVGPNDGPGPA*LTSIAA
Trigger: GGCTGCAATTGAGGTCAGCCACGCTGGCCCCGGACC...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACGATCTCACAGCTACGTaGGGCCCATGTGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: QALRISQLRGAHVASQGDDLTAT*GPCGVP
Trigger: TGGGACGCCACATGGGCCCCACGTAGCTGTGAGATC...GTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CAGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCAGGGACACTCCTGCTTTaGGTCTGCGCCCCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QGSRGLSASICEVGVERPGTLLL*VCAPFW
Trigger: CCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCC...TGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCACTCCACAGTGCCTaGCACACAGAGGTGCTCGGA +
Preference number: 4 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVSLHSA*HTEVLG
Trigger: TCCGAGCACCTCTGTGTGCCAGGCACTGTGGAGTGA...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCCGGCTTCGCGGTGGCTaGCTTCCCGCTGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLRLRGG*LPAGSV
Trigger: CACGGAGCCAGCGGGAAGCCAGCCACCGCGAAGCCG...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTCGTAGAAGTCCTGCATaGGCACGTCGCGTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GSVGRSCLEQPGKWSPPLRRSPA*ARRVRA
Trigger: AGCCCGAACGCGACGTGCTCATGCAGGACTTCTACG...AAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGCGGGCATGTCCTGCATaGAGTCCAGGTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGRACPA*SPGPCR
Trigger: CCTACAAGGACCTGGACTTCATGCAGGACATGCCCG...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGACTGCAGGATGTCGATaGTGCCAATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVTAGCR*CQCAAA
Trigger: TGCTGCTGCACATTGGCATCATCGACATCCTGCAGT...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPRGEGCG*QSRGNG
Trigger: TCCATTGCCACGACTCTGTCATCCACATCCCTCTCC...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCTTGAACCACCGGAGATaGGGAGGAGGTGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TPASSSLGTTISTLHAGSLNHRR*GGGGRR
Trigger: GCGCCTGCCACCTCCTCCTCATCTCCGGTGGTTCAA...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp CGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGCCTCAATTGCAGCCGTaGTTTACCCAAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RWLASRWLRGTELPRAAGPQLQP*FTQSPS
Trigger: AGAAGGGCTTTGGGTAAATCACGGCTGCAATTGAGG...CCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGCTGCAGCCACTCTGCTaGCCTGTGCAACCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RISQLRGAHVASQGDLLELQPLC*PVQPPL
Trigger: CAGGGGAGGTTGCACAGGTCAGCAGAGTGGCTGCAG...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp AGCTGTGCACCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACAGCGCCTCCATCTGTaGGGTGGGTGTGGAGAGACC +
Preference number: 4 (lower is better)
Translates to: SCAPGDGAALWSARFDVGQRLHL*GGCGET
Trigger: GGTCTCTCCACACCCACCTCACAGATGGAGGCGCTG...TCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGGTGCACAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp ATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGAGCCAGCGCCTCCATCTGTaGGGTGGGTGTGGAGAGACC +
Preference number: 4 (lower is better)
Translates to: ISQLRGAHVASQGDLLESQRLHL*GGCGET
Trigger: GGTCTCTCCACACCCACCTCACAGATGGAGGCGCTG...GCTCTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCGCCCCGTTCTGGCTGTGCGCCAGGGCCCGGCTGTaGCGTCATGGACAGAACCTC +
Preference number: 4 (lower is better)
Translates to: LCLEGTLLLWVCAPFWLCARARL*RHGQNL
Trigger: GAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGC...GCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCGCCAGGGCCCGGCTGTaGCGTCATGGACAGAACCTC +
Preference number: 4 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMAARARL*RHGQNL
Trigger: GAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGC...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGAACTCGGCCTCCTTGTaGATGACGGTCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: RWLASRWLRGTELPRAAGNSASL*MTVLMM
Trigger: CATCATCAAGACCGTCATGCACAAGGAGGCCGAGTT...CCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGCCAGGGAGCAGCTTCTaGAGGAACTCGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGPGSSF*RNSASL
Trigger: CAAGGAGGCCGAGTTCCTGCAGAAGCTGCTCCCTGG...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCCGACGCGGATGTTCTTaGCCCCCGACTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCRRGCS*PPTARS
Trigger: ACTGCGTGCAGTCGGGGGGCAAGAACATCCGCGTCG...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGCCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGCGACGCGGATGTTCTTaGCCCCCGACTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: CLAHRGARRGLLMGGESRRRGCS*PPTARS
Trigger: ACTGCGTGCAGTCGGGGGGCAAGAACATCCGCGTCG...CCGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCCCCTCGGGCATGTCCTaGATGAAGTCCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERPSGMS*MKSRSL
Trigger: CAAGGACCTGGACTTCATGCAGGACATGCCCGAGGG...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGTGCTGGTCGATGTTGTaGACGCCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGCWSML*TPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCA...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGCCGCTCGCGCTCGTaGTGGTCGATGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEECRSRS*WSMLCT
Trigger: CGTGCACAACATCGACCAGCACGAGCGCGAGCGGCA...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGTCCGGGGCCAGCGTGGCTGACCTCAATTGCAGCCGTGATTTACCCAAAGCCCGTCCAGACGACTGTGTaGGCCGCCTGTACCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GPGPAWLTSIAAVIYPKPVQTTV*AACTAA
Trigger: AGCCGCGGTACAGGCGGCGCACACAGTCGTCTGGAC...GGGCTTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCACGCTGGCCCCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR GCA 90 bp TCGGCGATGGCGGGGAGAGTAAATCCAGTACCTCCCATCCGTGAACTGGACGGGGCGGGTGGCTCCTCCTaGGGCCTGCCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SAMAGRVNPVPPIRELDGAGGSS*GLPSCP
Trigger: TGGACAGGATGGCAGGCCGCAGGAGGAGCCACCCGC...CCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCCCGCCATCGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR GCA 90 bp CCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTCCACAATCTCCACGCTaGACGCAGGCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: PEDLTATWGPCGVPGGPPPQSPR*TQAPPA
Trigger: TGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGG...AGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGGGCCGTCGGCATCCGTaGAGGGGGAGGACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGGRRHP*RGRTRS
Trigger: GGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGTCAGGCCAGATGTCCTaGACTGAGGCCCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGSGQMS*TEAPKP
Trigger: GGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGA...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGCAAAACACAGAGCCCTaGCTGGGAGGTTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGQNTEP*LGGSPA
Trigger: GGCCGGAGAACCTCCCAGGCAGGGCTCTGTGTTTTG...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCGTATCCACAGAGGTTTaGACATTTCTCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: AGISRALGLSGVGSAFGGVSTEV*TFLLQR
Trigger: CCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATAC...GCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGTATCCACAGAGGTTTaGACATTTCTCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRVSTEV*TFLLQR
Trigger: CCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATAC...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGTTCAGAGCCCGGCCCTaGAGCCACTCTGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: TWDRMTFPVTHAAQRLVRFRARP*SHSADL
Trigger: CAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAA...CCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTGCCCCGTTCTGGCTGTaGGGTGCTGGGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SRGLSASICEVGVERPSPAPFWL*GAGQVS
Trigger: AGAGACCTGCCCAGCACCGCACAGCCAGAACGGGGC...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGAGCCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ISQLRGAHVASQGDLLESRCPAG*HPSGWR
Trigger: CCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCG...GCTCTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCACGTCGCGTTCGGGCTTaGAGCTCAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRARRVRA*SSGGPR
Trigger: CCGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACG...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCCGCCGCGCCCCTTCTTaGAGGGCGAGGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLRRAPS*RARTSG
Trigger: CCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCG...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CGCGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGAATGGAGAGGGATGTaGATGACAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RGGWLPAGSVGRSCLEQPEWRGM*MTESWQ
Trigger: TTGCCACGACTCTGTCATCCACATCCCTCTCCATTC...CGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGTCCTCGTCTGAGGCCTaGCTGGCAGTTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLSSSEA*LAVSTS
Trigger: TGAAGTAGAAACTGCCAGCCAGGCCTCAGACGAGGA...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCAACCAAAGAGTGCAGTaGGCAGGGGCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPNQRVQ*AGALLP
Trigger: AGGGAGAAGAGCCCCTGCCCACTGCACTCTTTGGTT...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTCCACCGCGAACAGCCTaGCTTCTTCCTCAGGACACA +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSPPRTA*LLPQDT
Trigger: TGTGTCCTGAGGAAGAAGCCAGGCTGTTCGCGGTGG...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATGCTCGAGGGGCACCTaGGAGGTGGGCGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVCSRGT*EVGVRA
Trigger: GGCCCTGACGCCCACCTCCCAGGTGCCCCTCGAGCA...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCAGCTGTGGTGGGTCTaGATTGGAGGCGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RPPALSCHGENVSVAWALQLWWV*IGGARG
Trigger: ACCTCTGGCGCCTCCAATCCAGACCCACCACAGCTG...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAGGGGAAGAGGAGGCCTaGCCCTCCAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAGEEEA*PSSCGG
Trigger: CCCACCACAGCTGGAGGGCCAGGCCTCCTCTTCCCC...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCGGCACATCTTGGAAGTaGGGGATTCCCACAGCCATC +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPGTSWK*GIPTAI
Trigger: GATGGCTGTGGGAATCCCCCACTTCCAAGATGTGCC...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGAGGCTCTGCCAGGTCTaGAGAGGAATTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWRLCQV*RGILPK
Trigger: TTTGGGAAGAATTCCTCTCCAGACCTGGCAGAGCCT...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCCTCTCCTGGGCAGAGTaGAGGGGCTGCTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCLSWAE*RGCSRG
Trigger: TCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAG...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCCCTCGGCACAGTCAGTaGAGCACGTCAGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: RPPALSCHGENVSVAWALPRHSQ*STSASV
Trigger: AACCGAGGCTGACGTGCTCCACTGACTGTGCCGAGG...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGCGGGGTGGGTCCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCACCCAGGAGGGGAAGTaGGCATTGGTCACCAAGGTA +
Preference number: 4 (lower is better)
Translates to: SGVGPAASLAGDLRETEFTQEGK*ALVTKV
Trigger: TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGT...GAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGGACCCACCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGATGCAAACCAGTGTTTaGGGCCAGGAGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWMQTSV*GQEWLY
Trigger: ATACAGCCACTCCTGGCCCCAAACACTGGTTTGCAT...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCTGCTGCCCACCTaGCAGGGCATCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: QGSRGLSASICEVGVERPSLLPT*QGIRTQ
Trigger: CTGTGTCCTGATGCCCTGCCAGGTGGGCAGCAGAGA...TGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp TCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGATCTCACAGCTACGTaGGGCCCATGTGGCGTCCCA +
Preference number: 4 (lower is better)
Translates to: SVGRSCLEQPGKWSPPLGDLTAT*GPCGVP
Trigger: TGGGACGCCACATGGGCCCCACGTAGCTGTGAGATC...CCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CAGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCACTGGCTGTGCGGTGCTaGGCAGGTCTCTTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QGSRGLSASICEVGVERPLAVRC*AGLLGS
Trigger: AGAGCCTAAGAGACCTGCCCAGCACCGCACAGCCAG...TGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CAA 72 bp AAACTTTCCAGGACCAGGCAGTCCCGCTGCAGCGTCTaGACCAGGGCGCTGAAGGTGTCGGCGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSRTRQSRCSV*TRALKVSASSR
Trigger: CCTGCTGGACGCCGACACCTTCAGCGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGTCCTGGAAAGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGCAGGTGCATAGGTCTTaGAGCGGAAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPRQVHRS*SGSPGS
Trigger: ACTTCCAGGACTTCCGCTTCAAGACCTATGCACCTG...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAATCCGCGGGTTCTGGTTaGGGTTCATGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIESAGSG*GSCSSQ
Trigger: CTGGCTACTACATGAACCTCAACCAGAACCCGCGGA...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCAGGCCGCTTCTCATCTaGGGTGCTCTGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLRPLLI*GALGAL
Trigger: CAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCT...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGACTGCAGGATGTCGATaGTGCCAATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLTAGCR*CQCAAA
Trigger: TGCTGCTGCACATTGGCATCATCGACATCCTGCAGT...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAACTCCATGCCAGTTGCTaGGTGGCCTACGTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIELHASC*VAYVGR
Trigger: TCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAG...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCCCTGACCTTCCGCCCTaGGCTGGTCTCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGPDLPP*AGLLWP
Trigger: GGGCCACAGGAGACCAGCTCAGGGCGGAAGGTCAGG...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGCAGGGCAGTCTGGGCTaGGTCCCACCACTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGQGSLG*VPPLGA
Trigger: CGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCCTG...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTGCTGGACAGACCCTCTaGGCACGCAGGGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGAGQTL*ARREDP
Trigger: GGGGTCCTCCCTGCGTGCTCAGAGGGTCTGTCCAGC...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTGGACAGGGCGGGGGCTaGTGGGTGGATGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGGQGGG*WVDARC
Trigger: GCACCGGGCATCCACCCATCAGCCCCCGCCCTGTCC...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCAAGCAGCCATCAGAGGTaGCCCAGGAGGGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SALWIVTHQTTGRRNGVASSHQR*PRRGSG
Trigger: CCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCT...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCGCAGGTGGGGACAGCTaGCTGCCAAGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SAPPSVRWVWRDHLLPVSAGGDS*LPSRRW
Trigger: CCACCTTCTGCTTGGCAGTCAGCTGTCCCCACCTGC...GGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR TCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCCTCAATTGCAGCCGTaGTTTACCCAAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLPQLQP*FTQSPS
Trigger: AGAAGGGCTTTGGGTAAATCACGGCTGCAATTGAGG...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGTGGGGATCTGGATTTTaGCTAAACCGTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGESRRPRRRLCLEGTLLWGSGF*LNRVVS
Trigger: GGAGACCACACGGTTTAGTCAAAATCCAGATCCCCA...CAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGGGTTGCTGCCTTCGGTaGCTGCACTCAGCCAATGAC +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWGCCLR*LHSAND
Trigger: GTCATTGGCTGAGTGCAGTCACCGAAGGCAGCAACC...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp GAACTTGAGGTGCATCTTGACCACGCGGGGCAGGATGTTGTTCATGACCACGACGAGGGGGACCCGAGCTaGGACCGCCGCCGCCGAACA +
Preference number: 4 (lower is better)
Translates to: ELEVHLDHAGQDVVHDHDEGDPS*DRRRRT
Trigger: TGTTCGGCGGCGGCGGTCGCAGCTCGGGTCCCCCTC...GTCGTGGTCATGAACAACATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp CCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTCCACGGTGTAGCCGATaGCCAGCTGGATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PRAAGEVVSTSWGHSTVPPRCSR*PAGWHP
Trigger: AGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGG...AGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGCCCTCGGGCATGTCCTaGATGAAGTCCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SVGRSCLEQPGKWSPPLGPSGMS*MKSRSL
Trigger: CAAGGACCTGGACTTCATGCAGGACATGCCCGAGGG...CCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMAASHLR*SGRPAP
Trigger: AGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGC...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVTCTVI*CRSSSA
Trigger: CGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGT...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATAGAAAACGTCTCCGTTaGCTGGGCCCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDRKRLR*LGPPCQ
Trigger: CTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTCGGGGCCACACCTGCTaGTCCGAGTCACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGRGHTC*SESPHR
Trigger: CCTGTGGGGTGACTCGGAGCAGCAGGTGTGGCCCCG...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTATTCCCAGTGACGCATaGAGCCCAGCGCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: RFDVGPNDIPSDACSPAPIPSDA*SPAPGP
Trigger: CGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAAT...AGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGATTCCCAGTGACGCATaGAGCCCAGCGCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTIPSDA*SPAPGP
Trigger: CGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAAT...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp ACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGTTCTGGCTGTGCGGTaGTGGGCAGGTCTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: TWDRMTFPVTHAAQRLVRVLAVR*WAGLLG
Trigger: GCCTAAGAGACCTGCCCAGCACCGCACAGCCAGAAC...CCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TGCCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGGTTCTGGCTGTGCGGTaGTGGGCAGGTCTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: CLAHRGARRGLLMGGESRVLAVR*WAGLLG
Trigger: GCCTAAGAGACCTGCCCAGCACCGCACAGCCAGAAC...CCGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACCCGGCTGTGCCGTCATaGACAGAACCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PGDGAALWSARFDVGPNDPAVPS*TEPLLG
Trigger: CCCCAACAGAGGTTCTGTCCATGACGGCACAGCCGG...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGGCGTCCACACCTCGATaGCCCAACTTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWASTPR*PNFFPW
Trigger: CCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGC...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCCGTCGCGTTCGGGCTTaGAGCTCAGGTGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGRRVRA*SSGGPR
Trigger: CCGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACG...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGTTGCTGCCTTCGCTaGGGAAGAAGATGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEGCCLR*GRRCSP
Trigger: TGGAGAGCATCTTCTTCCCCAGCGAAGGCAGCAACC...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335312.8
ENST00000679885.1
CDS-3UTR CCA 90 bp ACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGAAGTCCTGGAAGTGGTaGGCGGGGGTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TWDRMTFPVTHAAQRLVRKSWKW*AGVRLL
Trigger: CAGCAACCTCACCCCCGCCCACCACTTCCAGGACTT...CCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCCAGGTCCTTGTAGGTaGGGAAGCTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLPGPCR*GSSSPS
Trigger: AGAAGGAGAAGAGCTTCCCCACCTACAAGGACCTGG...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACTGGACTCCATGGCCGTaGAGTAGAGCGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PGDGAALWSARFDVGPNDWTPWP*SRAPSG
Trigger: GCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCA...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCTGGACTCCATGGCCGTaGAGTAGAGCGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TPASSSLGTTISTLHAGSWTPWP*SRAPSG
Trigger: GCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCA...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGACCGTGTCCCCATCGTaGACGAGGGCCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTTVSPS*TRAFQV
Trigger: CACCTGGAAGGCCCTCGTCCACGATGGGGACACGGT...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCGCTCGGCATAGAAGCTaGGGCGGTGGACGGACACCG +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLARHRS*GGGRTP
Trigger: CGGTGTCCGTCCACCGCCCCAGCTTCTATGCCGAGC...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTTTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSFFERR*RAGQEV
Trigger: GACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAA...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCTTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VERPSPPRLHGPAVQSPAFFERR*RAGQEV
Trigger: GACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAA...GGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAATTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIEFFERR*RAGQEV
Trigger: GACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAA...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGGAATGGAGAGGGATGTaGATGACAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVEWRGM*MTESWQ
Trigger: TTGCCACGACTCTGTCATCCACATCCCTCTCCATTC...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCACTGCGTCCTCCTCTTTaGGGACCACAATCTCCACGC +
Preference number: 4 (lower is better)
Translates to: QGSRGLSASICEVGVERPLRPPL*GPQSPR
Trigger: GCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAG...TGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCGTCTGAGGCCTGGCTaGCAGTTTCTACTTCAACAG +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPRLRPG*QFLLQQ
Trigger: CTGTTGAAGTAGAAACTGCCAGCCAGGCCTCAGACG...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCTCCTCGTCTGAGGCCTaGCTGGCAGTTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPSSSEA*LAVSTS
Trigger: TGAAGTAGAAACTGCCAGCCAGGCCTCAGACGAGGA...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTTGGGCCTCAGCGGGGTaGGCAGCGCCTTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSWASAG*AAPSGA
Trigger: TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCA...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGACGAGGTCCGGTaGGGCGGCGAGGCGGGCATC +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAAREDEVR*GGEAGI
Trigger: GATGCCCGCCTCGCCGCCCCACCGGACCTCGTCCTC...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACCCCTCTGCAGGCCGATaGGGCCCCCGGGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYPSAGR*GPRGSG
Trigger: ACCTGAGCCCCGGGGGCCCCATCGGCCTGCAGAGGG...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAACGCTTCCCACGTGGATaGAGGCAGAGTTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEERFPRG*RQSCSG
Trigger: TCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCG...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGGGGGAAGAGGAGGCCTaGCCCTCCAGCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGGEEEA*PSSCGG
Trigger: CCCACCACAGCTGGAGGGCCAGGCCTCCTCTTCCCC...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTCTGTGGAGCCGGGCCTaGCCCCCTAGGCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRLWSRA*PPRPCL
Trigger: GAGACATGGCCTAGGGGGCCAGGCCCGGCTCCACAG...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGAGGGGAAGTGGGCATTaGTCACCAAGGTATTTACAG +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWRGSGH*SPRYLQ
Trigger: CTGTAAATACCTTGGTGACCAATGCCCACTTCCCCT...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCTGCCCACGTTCTCAGTaGACAGCAGCCATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERCPRSQ*TAAIRG
Trigger: ACCTCTGATGGCTGCTGTCCACTGAGAACGTGGGCA...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTGCGCCCGGTTCGACGTaGGACCGAATGACATTCCCA +
Preference number: 4 (lower is better)
Translates to: GLSASICEVGVERPSPPRAPGST*DRMTFP
Trigger: TGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGC...ACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCTCCTCCCCGTCTCCATaGCCCTGCGGTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: MTTAGPEDLTATWGPCGVSSPSP*PCGSEP
Trigger: GGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGA...GACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGCTGGCTGTGCGGTGCTaGGCAGGTCTCTTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RISQLRGAHVASQGDLLELAVRC*AGLLGS
Trigger: AGAGCCTAAGAGACCTGCCCAGCACCGCACAGCCAG...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCGGGACACTCCTGCTTTaGGTCTGCGCCCCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SAPPSVRWVWRDHLLPVSGTLLL*VCAPFW
Trigger: CCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCC...GGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp ACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGTCCGCGGGTTCTGGTTaGGGTTCATGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TAASAEALSRGDTPALGLSAGSG*GSCSSQ
Trigger: CTGGCTACTACATGAACCTCAACCAGAACCCGCGGA...CAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTCCGCGGGTTCTGGTTaGGGTTCATGTAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PEDLTATWGPCGVPGGPPSAGSG*GSCSSQ
Trigger: CTGGCTACTACATGAACCTCAACCAGAACCCGCGGA...AGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: GSVGRSCLEQPGKWSPPLGEGCG*QSRGNG
Trigger: TCCATTGCCACGACTCTGTCATCCACATCCCTCTCC...AAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCTGGGGGTTGGGCCTTTaGGATGACAATGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TPASSSLGTTISTLHAGSWGLGL*DDNAPV
Trigger: GACAGGGGCATTGTCATCTCAAAGGCCCAACCCCCA...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp GTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCACCTGCACGACAGGCGGAGCGATTaGACCACCGGAGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: VLLFGDHNLHAARRLHLHDRRSD*TTGDEE
Trigger: CTCCTCATCTCCGGTGGTTCAATCGCTCCGCCTGTC...GTGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCAGCTGTGCACCTGGTaGTGGTGCTGCCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMAQLCTW*WCCPME
Trigger: CTCCATAGGGCAGCACCATCACCAGGTGCACAGCTG...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCGGTGGTTTCGCCGGATaGGTCCACACCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLGGFAG*VHTSMA
Trigger: GGCCATCGAGGTGTGGACGCATCCGGCGAAACCACC...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCACCAGGCAGTCCCGCTaGAGCGTCTTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGTRQSR*SVLTRA
Trigger: CGCCCTGGTCAAGACGCTGCAGCGGGACTGCCTGGT...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCAGGGCCTTCCAGGTGTaGTCCAGTTTCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: TISSPSPWPCGSEPGPAARAFQV*SSFLMN
Trigger: GTTCATCAAGAAACTGGAGCACACCTGGAAGGCCCT...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFTCTVI*CRSSSA
Trigger: CGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGT...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVGRSCLEQPGKWSPPLGHAGST*TVICCR
Trigger: TCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTG...CCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCAGGCCGTCGGCATCCGTaGAGGGGGAGGACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSGRRHP*RGRTRS
Trigger: GGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGGGATGGAGGCAGAGTTaGTCGGGACCCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGGWRQS*SGPQPS
Trigger: GGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCC...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCGGATGGAGGCAGAGTTaGTCGGGACCCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTGWRQS*SGPQPS
Trigger: GGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCC...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATGCAGCGTGTGGGCTGTaGAGGAGGCCGACGGGACGT +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYAACGL*RRPTGR
Trigger: ACGTCCCGTCGGCCTCCTGCACAGCCCACACGCTGC...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCACAATGCCCCTGTCCCTaGTGGCCATCCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAQCPCP*WPSRSQ
Trigger: CTGGGACCTGGATGGCCAGCAGGGACAGGGGCATTG...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGCAGGAATTTGGACACTaGCCACGTTCTCAGTGGACA +
Preference number: 4 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPRQEFGH*PRSQWT
Trigger: TGTCCACTGAGAACGTGGGCAGTGTCCAAATTCCTG...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGAAGACACACGAGGTTTaGAGTTTCATTTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RPSASVQGEDEVRWGGEAKTHEV*SFILFQ
Trigger: CTGAAACAAAATGAAACTGCAAACCTCGTGTGTCTT...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCGGGGTCACTCCACAGTaGCTGGCACACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: CLEQPGKWSPPLGVTPQCGVTPQ*LAHRGA
Trigger: AGCACCTCTGTGTGCCAGGCACTGTGGAGTGACCCC...GCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGGGACAGAACCTCTGTTaGGGCCGCCTTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AGEVVSTSWGHSTVPGTQGQNLC*GRLLLS
Trigger: GCTCAGAAGAAGGCGGCCCCAACAGAGGTTCTGTCC...CTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCGGCTGTGCCGTCATaGACAGAACCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPRAAGEVVSTSWGHSTVPAVPS*TEPLLG
Trigger: CCCCAACAGAGGTTCTGTCCATGACGGCACAGCCGG...CACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTPNFFP*PGPGCA
Trigger: GGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGG...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGTGGCACCCTTCAGGGTaGAGGAGGTGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWWHPSG*RRWSSC
Trigger: ACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCA...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCGGTTGCTGCCTTCGCTaGGGAAGAAGATGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSGCCLR*GRRCSP
Trigger: TGGAGAGCATCTTCTTCCCCAGCGAAGGCAGCAACC...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335312.8
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGCGATGGCGGGGAGAGTAAATCCAGTACCTCCCATCCGTGAACTGGACGGGAGAAGAGGGAGCCACTaGCGCCCGGGTTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: SAMAGRVNPVPPIRELDGRRGSH*RPGWTA
Trigger: AGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCT...CCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCCCGCCATCGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp TGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCACAGCCCATAGAACTTaGGCAGCAGCGTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: CLEQPGKWSPPLGVTPQCTAHRT*AAASAG
Trigger: ACCCGCGGACGCTGCTGCCCAAGTTCTATGGGCTGT...GCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCCAGGTCCTTGTAGGTaGGGAAGCTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QALRISQLRGAHVASQGDPGPCR*GSSSPS
Trigger: AGAAGGAGAAGAGCTTCCCCACCTACAAGGACCTGG...GTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCCGCTCGCGCTCGTGCTaGTCGATGTTGTGCACGCCC +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGRSRSC*SMLCTP
Trigger: GGGCGTGCACAACATCGACCAGCACGAGCGCGAGCG...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCACGAGTGAGAAGCGTCCACCCAAGACACCCTGACACGAGAGGGCTGGGTCCACCTGGATGGACTCCATaGCCGTGGAGTAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ARVRSVHPRHPDTRGLGPPGWTP*PWSRAP
Trigger: AGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGG...TGGACCCAGCCCTCTCGTGTCAGGGTGTCTTGGGTGGACGCTTCTCACTCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCTTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSFFERR*RAGQEV
Trigger: GACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAA...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCACGTCTGAGGCCTGGCTaGCAGTTTCTACTTCAACAG +
Preference number: 4 (lower is better)
Translates to: ETISSPSPWPCGSEPGPARLRPG*QFLLQQ
Trigger: CTGTTGAAGTAGAAACTGCCAGCCAGGCCTCAGACG...TGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTGGACTCAAATGCGATTaGCCGCTCGGGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAGLKCD*PLGRVG
Trigger: ACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCC...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAAAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEENIAAE*PQCLAG
Trigger: CCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTT...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCATGCTCGAGGGGCACCTaGGAGGTGGGCGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSCSRGT*EVGVRA
Trigger: GGCCCTGACGCCCACCTCCCAGGTGCCCCTCGAGCA...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATGTGGTGGGTCTGGATTaGAGGCGCCAGAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDVVGLD*RRQRFL
Trigger: CAAAAACCTCTGGCGCCTCCAATCCAGACCCACCAC...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCATGCCAGTTGCTGAGTaGCCTACGTTGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSASHVDGGRVARDPSRPMPVAE*PTLEEK
Trigger: CTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCAT...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCGAACAGCGGGTGGCGTaGCGTCATACGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCEQRVA*RHTEVV
Trigger: TACAACCTCCGTATGACGCCACGCCACCCGCTGTTC...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTTGGGAGCCACGCGGCTaGCCGGTTCCCGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGWEPRG*PVPEEG
Trigger: ACCCTCCTCGGGAACCGGCCAGCCGCGTGGCTCCCA...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTTGGGAGCCACGCGGCTaGCCGGTTCCCGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSWEPRG*PVPEEG
Trigger: ACCCTCCTCGGGAACCGGCCAGCCGCGTGGCTCCCA...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCCACCCCACAGGCTCTTaGCGTCTCTGGTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGHPTGS*RLWCQG
Trigger: GCCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTG...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGTCTCCAAAAGGGCCTTaGAGACAACACAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWSPKGP*RQHKNG
Trigger: TCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGA...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGCTGGCAGGAGACACATaGAAGTTTCCGCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SPAKARRPGTGVPCHSAELAGDT*KFPPCQ
Trigger: CTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAG...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCGAGATGAGGAGGAGGTaGCAGGCGCCTCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGEMRRR*QAPLLG
Trigger: CCCCAGGAGAGGCGCCTGCCACCTCCTCCTCATCTC...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATAAAATGGGACTGGGTTaGGGACAGGCGGAGCGATTG +
Preference number: 4 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDKMGLG*GQAERL
Trigger: CAATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTT...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAACTCGTCTCGGCGCTTTaGATTGTCACGCACCAGACC +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEELVSAL*IVTHQT
Trigger: GGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAG...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCAAAAGTAGATGTCGGTaGCGGGCGCGTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCKSRCR*RARPPR
Trigger: ACGAGGAGGACGCGCCCGCCACCGACATCTACTTTT...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCGATGGTGCTGCCCTATaGAGCGCCCGGTTCGACGTG +
Preference number: 4 (lower is better)
Translates to: MTTAGPEDLTATWGPCGVDGAAL*SARFDV
Trigger: CACGTCGAACCGGGCGCTCCATAGGGCAGCACCATC...GACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp ACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCCTCCATCTGTGAGGTaGGTGTGGAGAGACCATCTC +
Preference number: 4 (lower is better)
Translates to: TAASAEALSRGDTPALGLPPSVR*VWRDHL
Trigger: GAGATGGTCTCTCCACACCCACCTCACAGATGGAGG...CAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCGAGCAGCCGGGGAAGTaGTCTCCACCTCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLEQPGK*SPPLGV
Trigger: GACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTC...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CAA 72 bp TTGAGGGACACAGCACCCTCGTCTCGGCGCTTTGGATaGTCACGCACCAGACCACGGGGCGGAGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: LRDTAPSSRRFG*SRTRPRGGGME
Trigger: CTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTGCTGTGTCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GAGGAGGAAGGAAAACAGAGGACAGCGGATGAGGCGGCCACCCCCGTGGTCGGGGCAGGATGTTGTTCATaGCCACGACGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: EEEGKQRTADEAATPVVGAGCCS*PRRGCS
Trigger: AGAACATCCGCGTCGTGGTCATGAACAACATCCTGC...CCCGACCACGGGGGTGGCCGCCTCATCCGCTGTCCTCTGTTTTCCTTCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR TCA 90 bp GTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTGCAGGATGTTGTTCATaGCCACGACGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: VTAASAEALSRGDTPALGAGCCS*PRRGCS
Trigger: AGAACATCCGCGTCGTGGTCATGAACAACATCCTGC...ACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp TCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCCGGGCATGTCCTGCATaGAGTCCAGGTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SAPPSVRWVWRDHLLPVSRACPA*SPGPCR
Trigger: CCTACAAGGACCTGGACTTCATGCAGGACATGCCCG...GGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATAGGCCGCTTCTCATCTaGGGTGCTCTGGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYRPLLI*GALGAL
Trigger: CAGGGCGCCCAGAGCACCTCAGATGAGAAGCGGCCT...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAAGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEEGEGCG*QSRGNG
Trigger: TCCATTGCCACGACTCTGTCATCCACATCCCTCTCC...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGCTGGACAGACCCTCTaGGCACGCAGGGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARAGQTL*ARREDP
Trigger: GGGGTCCTCCCTGCGTGCTCAGAGGGTCTGTCCAGC...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCACACCAGGCTGTGAACTaGGGCCAAGGTCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAHQAVN*GQGRFP
Trigger: TGGGAAGCGACCTTGGCCTCAGTTCACAGCCTGGTG...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CTTGTGCATGACGGTCTTGATGATGAACTCGTCGTCGCTGGTGACGTAGAAGAGGGACAGGGCGGGGGCTaGTGGGTGGATGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LVHDGLDDELVVAGDVEEGQGGG*WVDARC
Trigger: GCACCGGGCATCCACCCATCAGCCCCCGCCCTGTCC...CTCTTCTACGTCACCAGCGACGACGAGTTCATCATCAAGACCGTCATGCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp AGGGCAGGAGGTCGGGCCGGCCTTCGTCCTCCAGCGTGGGGTAGCTGCGGGCCCACACAAGAATGGAAATaGAATGGTATCCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: RAGGRAGLRPPAWGSCGPTQEWK*NGIHRG
Trigger: ACCTCTGTGGATACCATTTCATTTCCATTCTTGTGT...GGGCCCGCAGCTACCCCACGCTGGAGGACGAAGGCCGGCCCGACCTCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCCCAGGGAGCAGCTTCTaGAGGAACTCGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLPGSSF*RNSASL
Trigger: CAAGGAGGCCGAGTTCCTGCAGAAGCTGCTCCCTGG...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTCGACGCGGATGTTCTTaGCCCCCGACTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRRRGCS*PPTARS
Trigger: ACTGCGTGCAGTCGGGGGGCAAGAACATCCGCGTCG...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTAGGTCGAACTTGAGGTaGATCTTGACCACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RFDVGPNDIPSDACSPAPRSNLR*ILTTRG
Trigger: GCCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCT...AGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGAGGTCGAACTTGAGGTaGATCTTGACCACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTRSNLR*ILTTRG
Trigger: GCCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCT...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGTCTCCTTCTCCTTCTTaGTGGCGCGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTSPSPS*WRAACR
Trigger: CCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGGAGA...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGTCTCCTTCTCCTTCTTaGTGGCGCGCCGCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PSVRWVWRDHLLPVSMALSPSPS*WRAACR
Trigger: CCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGGAGA...CAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GCACGAGTGAGAAGCGTCCACCCAAGACACCCTGACACGAGAGGGCTGGGTCCACCCTCGGGCATGTCCTaGATGAAGTCCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARVRSVHPRHPDTRGLGPPSGMS*MKSRSL
Trigger: CAAGGACCTGGACTTCATGCAGGACATGCCCGAGGG...TGGACCCAGCCCTCTCGTGTCAGGGTGTCTTGGGTGGACGCTTCTCACTCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCTGCCGCTCGCGCTCGTaGTGGTCGATGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGCRSRS*WSMLCT
Trigger: CGTGCACAACATCGACCAGCACGAGCGCGAGCGGCA...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTTGCCGCTCGCGCTCGTaGTGGTCGATGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGCRSRS*WSMLCT
Trigger: CGTGCACAACATCGACCAGCACGAGCGCGAGCGGCA...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCACTCTGCTGACCTGTGCAGGGCCTTCCAGGTGTaGTCCAGTTTCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: SMALRFRARPCSHSADLCRAFQV*SSFLMN
Trigger: GTTCATCAAGAAACTGGAGCACACCTGGAAGGCCCT...GCACAGGTCAGCAGAGTGGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVCTVIC*RSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCA...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: PEDLTATWGPCGVPGGPPCTVIC*RSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCA...AGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TPASSSLGTTISTLHAGSHAGST*TVICCR
Trigger: TCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTG...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTGCTGAGTGGCCGCAGTaGTTGGCAGGGCGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGAEWPQ*LAGRGL
Trigger: CAGCCCTCGCCCTGCCAAGCACTGCGGCCACTCAGC...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCAGGAATTTGGACACTaGCCACGTTCTCAGTGGACA +
Preference number: 4 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFQEFGH*PRSQWT
Trigger: TGTCCACTGAGAACGTGGGCAGTGTCCAAATTCCTG...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCGCTCTCTGGGCCCCTTaGTTATTGGTCATAATGACA +
Preference number: 4 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLALWAP*LLVIMT
Trigger: TGTCATTATGACCAATAAGCAAGGGGCCCAGAGAGC...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGCCTGGCACACAGAGGTaGTCGGAGAGGTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RISQLRGAHVASQGDLLEPGTQR*SERFAD
Trigger: ATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGG...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGTGGTCTTCTTGTAGGTaGTTTCGCCGGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWWSSCR*FRRMRP
Trigger: TGGACGCATCCGGCGAAACCACCTACAAGAAGACCA...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGTGGCACCCTTCAGGGTaGAGGAGGTGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CLAHRGARRGLLMGGESRWHPSG*RRWSSC
Trigger: ACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCA...CCGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGTCATCTGAGGTGCTCTaGGCGCCCTGCGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARSSEVL*APCACR
Trigger: GCGGCAGGCGCAGGGCGCCCAGAGCACCTCAGATGA...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGTGTCATCCGATTCGATaGCCTCCCCGCGCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARCHPIR*PPRARR
Trigger: GCGCCGCGCGCGGGGAGGCCATCGAATCGGATGACA...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCCGCTCGCTAGGGATCTaGCTGGCCGAGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVRSLGI*LAEKAA
Trigger: CGCTGCCTTCTCGGCCAGCCAGATCCCTAGCGAGCG...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGCCCCGCAGGTCGTACTaGGCCTCCTCCCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARPRRSY*ASSRSL
Trigger: TAGCGAGCGGGAGGAGGCCCAGTACGACCTGCGGGG...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTCCCCGCAGGTCGTACTaGGCCTCCTCCCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGPRRSY*ASSRSL
Trigger: TAGCGAGCGGGAGGAGGCCCAGTACGACCTGCGGGG...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGTTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGEVVSTSWGHSTVPGTQFFERR*RAGQEV
Trigger: GACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAA...CTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCGAATGGAGAGGGATGTaGATGACAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSEREWRGM*MTESWQ
Trigger: TTGCCACGACTCTGTCATCCACATCCCTCTCCATTC...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCTGCGTCCTCCTCTTTaGGGACCACAATCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTLRPPL*GPQSPR
Trigger: GCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAG...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCAGCATCTCCCGAGCTCTaGGCCTCAGCGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSASPEL*ASAGWA
Trigger: TGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGC...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAACAGCTCCTCACATCCTaGGCACATCTTGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEEQLLTS*AHLGSG
Trigger: CCCACTTCCAAGATGTGCCCAGGATGTGAGGAGCTG...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAACACAGAGCCCTGCCTaGGAGGTTCTCCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVTQSPA*EVLRPS
Trigger: AGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGT...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTGTCCTGATGGATGCTaGGAGCCACGCGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVCPDGC*EPRGWP
Trigger: CGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACA...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGCGGGGTGGGTCCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCAGGGGAAGTGGGCATTaGTCACCAAGGTATTTACAG +
Preference number: 4 (lower is better)
Translates to: SGVGPAASLAGDLRETEFRGSGH*SPRYLQ
Trigger: CTGTAAATACCTTGGTGACCAATGCCCACTTCCCCT...GAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGGACCCACCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAGAGATGAGGAGGAGGTaGCAGGCGCCTCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAEMRRR*QAPLLG
Trigger: CCCCAGGAGAGGCGCCTGCCACCTCCTCCTCATCTC...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCACTCGTCTCGGCGCTTTaGATTGTCACGCACCAGACC +
Preference number: 4 (lower is better)
Translates to: SALWIVTHQTTGRRNGVALVSAL*IVTHQT
Trigger: GGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAG...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTAAAAGTAGATGTCGGTaGCGGGCGCGTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SRGLSASICEVGVERPSPKSRCR*RARPPR
Trigger: ACGAGGAGGACGCGCCCGCCACCGACATCTACTTTT...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GCACGAGTGAGAAGCGTCCACCCAAGACACCCTGACACGAGAGGGCTGGGTCCAAAAAGTAGATGTCGGTaGCGGGCGCGTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: ARVRSVHPRHPDTRGLGPKSRCR*RARPPR
Trigger: ACGAGGAGGACGCGCCCGCCACCGACATCTACTTTT...TGGACCCAGCCCTCTCGTGTCAGGGTGTCTTGGGTGGACGCTTCTCACTCGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGAGGTGCGCCCGGTTCGACGTaGGACCGAATGACATTCCCA +
Preference number: 4 (lower is better)
Translates to: GKWSPPLGVTPQCLAHRGAPGST*DRMTFP
Trigger: TGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGC...ACCTCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGTCTGTGAGGTGGGTGTaGAGAGACCATCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PSVRWVWRDHLLPVSMALSVRWV*RDHLLP
Trigger: GGGGAGGAGATGGTCTCTCCACACCCACCTCACAGA...CAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCTCTGTGAGGTGGGTGTaGAGAGACCATCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMASVRWV*RDHLLP
Trigger: GGGGAGGAGATGGTCTCTCCACACCCACCTCACAGA...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCGGCTGCGGTCACTTACAGTCCCCGAGGCGCTCAGCGTCACGGCCCGCAGTCGGAGAGCTTGGGGATCTaGATTTTGACTAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: PAAVTYSPRGAQRHGPQSESLGI*ILTKPC
Trigger: ACACGGTTTAGTCAAAATCCAGATCCCCAAGCTCTC...CGACTGCGGGCCGTGACGCTGAGCGCCTCGGGGACTGTAAGTGACCGCAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTTCACTCCACAGTGCCTaGCACACAGAGGTGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SRGLSASICEVGVERPSPSLHSA*HTEVLG
Trigger: TCCGAGCACCTCTGTGTGCCAGGCACTGTGGAGTGA...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGGTGGTCTCCACCTCTTaGGGTCACTCCACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSVRWVWRDHLLPVSMALVVSTS*GHSTVP
Trigger: AGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCAC...CAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGGTGGTCTCCACCTCTTaGGGTCACTCCACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTVVSTS*GHSTVP
Trigger: AGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCAC...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTGTGGAGCAGAAACACTaGTCATGTCCGAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSVEQKH*SCPKGK
Trigger: CTTCCCTTTCGGACATGACCAGTGTTTCTGCTCCAC...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp GGGAGAGTAAATCCAGTACCTCCCATCCGTGAACTGGACGGGGCGGGCCGGGTGCAGGTGCATAGGTCTTaGAGCGGAAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRVNPVPPIRELDGAGRVQVHRS*SGSPGS
Trigger: ACTTCCAGGACTTCCGCTTCAAGACCTATGCACCTG...CACCCGGCCCGCCCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR TCA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGCAGGTGCATAGGTCTTaGAGCGGAAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RISQLRGAHVASQGDLLEQVHRS*SGSPGS
Trigger: ACTTCCAGGACTTCCGCTTCAAGACCTATGCACCTG...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp CTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCGCCCCGTTCTGGCTGTGCGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: LCLEGTLLLWVCAPFWLCGEGCG*QSRGNG
Trigger: TCCATTGCCACGACTCTGTCATCCACATCCCTCTCC...GCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTCCAGATGTCCTGCACTaGGGCCCCCAAACCCAAGCT +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGPDVLH*GPQTQA
Trigger: AGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGG...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATCGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYREHSC*VAAVLG
Trigger: GCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCG...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCCAGGGCAGTCTGGGCTaGGTCCCACCACTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRQGSLG*VPPLGA
Trigger: CGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCCTG...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGAGGCCGACGGGACGTaGACAGCGGGTGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMEADGT*TAGGVA
Trigger: CGCCACGCCACCCGCTGTTCACGTCCCGTCGGCCTC...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAATGAGCACCAGGCTGTaGACTGAGGCCAAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAMSTRL*TEAKVA
Trigger: AGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCAT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTGAGACAGTACCATGGTaGAGGACCCCATGGCAATGG +
Preference number: 4 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAETVPW*RTPWQW
Trigger: CCATTGCCATGGGGTCCTTCACCATGGTACTGTCTC...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CAGGGGAGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATGGGGATCTGGATTTTaGCTAAACCGTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QGSRGLSASICEVGVERPWGSGF*LNRVVS
Trigger: GGAGACCACACGGTTTAGTCAAAATCCAGATCCCCA...TGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGCCAGGGCCCGGCTGTaGCGTCATGGACAGAACCTC +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARARARL*RHGQNL
Trigger: GAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGC...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCTGCTGGTCGATGTTGTaGACGCCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTCWSML*TPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCA...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATAGGGCCTTCCAGGTGTaGTCCAGTTTCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDRAFQV*SSFLMN
Trigger: GTTCATCAAGAAACTGGAGCACACCTGGAAGGCCCT...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCGTCCAGACGACTGTGTaGGCCGCCTGTACCGCGGCT +
Preference number: 4 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRVQTTV*AACTAA
Trigger: AGCCGCGGTACAGGCGGCGCACACAGTCGTCTGGAC...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAGCTTGTCCTGATGGATaGTGGGAGCCACGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAACPDG*WEPRGW
Trigger: CCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGC...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCATTTGCACATTTCTCCTaGAAAGGCGCGTCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAFAHFS*KGASAG
Trigger: CCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAA...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCATTATAAATAGGTCTTaGCGTCCTCCTGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TPASSSLGTTISTLHAGSIINRS*RPPAPA
Trigger: GGCGGGGGCAGGAGGACGGCAAGACCTATTTATAAT...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCCAGGAATTTGGACACTaGCCACGTTCTCAGTGGACA +
Preference number: 4 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSQEFGH*PRSQWT
Trigger: TGTCCACTGAGAACGTGGGCAGTGTCCAAATTCCTG...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCCCTGGCACACAGAGGTaGTCGGAGAGGTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SAPPSVRWVWRDHLLPVSPGTQR*SERFAD
Trigger: ATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGG...GGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTCCGGCTGTGCCGTCATaGACAGAACCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRPAVPS*TEPLLG
Trigger: CCCCAACAGAGGTTCTGTCCATGACGGCACAGCCGG...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARPNFFP*PGPGCA
Trigger: GGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGG...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCTGGCACCCTTCAGGGTaGAGGAGGTGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMAWHPSG*RRWSSC
Trigger: ACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCA...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTTGGCACCCTTCAGGGTaGAGGAGGTGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAWHPSG*RRWSSC
Trigger: ACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCA...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCTGCGCCCCGTTCTGGCTGTGCGGTTGCTGCCTTCGCTaGGGAAGAAGATGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCLEGTLLLWVCAPFWLCGCCLR*GRRCSP
Trigger: TGGAGAGCATCTTCTTCCCCAGCGAAGGCAGCAACC...GCACAGCCAGAACGGGGCGCAGACCCAAAGCAGGAGTGTCCCCTCGAGACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGAAGTCCTGGAAGTGGTaGGCGGGGGTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGKSWKW*AGVRLL
Trigger: CAGCAACCTCACCCCCGCCCACCACTTCCAGGACTT...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAAGAAGAGGGAGCCACTaGCGCCCGGGTTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRARRGSH*RPGWTA
Trigger: AGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCT...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGAGGAAGGAAAACAGAGGACAGCGGATGAGGCGGCCACCCCCGTGGTCGGGGAATGGAGAGGGATGTaGATGACAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EEEGKQRTADEAATPVVGEWRGM*MTESWQ
Trigger: TTGCCACGACTCTGTCATCCACATCCCTCTCCATTC...CCCGACCACGGGGGTGGCCGCCTCATCCGCTGTCCTCTGTTTTCCTTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCATCCTCTTCCGCGGGTaGCTCCTCCTGCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRILFRG*LLLRPA
Trigger: GGCAGGCCGCAGGAGGAGCCACCCGCGGAAGAGGAT...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTGGACTCAAATGCGATTaGCCGCTCGGGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGGLKCD*PLGRVG
Trigger: ACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCC...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCCTGGCCCTCCAGCTGTaGTGGGTCTGGATTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVLALQL*WVWIGG
Trigger: GCCTCCAATCCAGACCCACCACAGCTGGAGGGCCAG...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACTGGGAGGACTGGTGTaGCCTCTGGGGGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSLGGLV*PLGVGP
Trigger: AGGCCCAACCCCCAGAGGCCACACCAGTCCTCCCAG...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCGACTCGAGGACTCCCTaGGAGGACTGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVDSRTP*EDWCGL
Trigger: GAGGCCACACCAGTCCTCCCAGGGAGTCCTCGAGTC...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGTACAGTACAGGAATTTaGACACTGCCCACGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRYSTGI*TLPTFS
Trigger: TGAGAACGTGGGCAGTGTCCAAATTCCTGTACTGTA...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTGGGGACGTGTCGGGATaGCGTAGGGGGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGGDVSG*RRGTEP
Trigger: AGGCTCTGTCCCCCTACGCCATCCCGACACGTCCCC...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCACCTGCACGTTTGGGGCCAGGAGTaGCTGTATGGTTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VLLFGDHNLHAARRLHLHVWGQE*LYGFRG
Trigger: GCCTCTGAAACCATACAGCCACTCCTGGCCCCAAAC...GTGCAGGTGGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCCTCCATCTGTGAGGTaGGTGTGGAGAGACCATCTC +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTPPSVR*VWRDHL
Trigger: GAGATGGTCTCTCCACACCCACCTCACAGATGGAGG...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
3UTR CAA 72 bp CTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATaGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSLCQIRTQMR*AAREGGSHRGR
Trigger: CCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATCGTAGAAGTCCTGCATaGGCACGTCGCGTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYRRSPA*ARRVRA
Trigger: AGCCCGAACGCGACGTGCTCATGCAGGACTTCTACG...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACCGGGAACATAGCTGCTaGGTGGCCGCAGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYREHSC*VAAVLG
Trigger: GCCAAGCACTGCGGCCACTCAGCAGCTATGTTCCCG...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGCCACGGTGTAGCCGATaGCCAGCTGGATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARPRCSR*PAGWHP
Trigger: AGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGG...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCCACGGTGTAGCCGATaGCCAGCTGGATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSPRCSR*PAGWHP
Trigger: AGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGG...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATTGCTGGTCGATGTTGTaGACGCCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYCWSML*TPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCA...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GTGGCTGACCTCAATTGCAGCCGTGATTTACCCAAAGCCCTTCTGGAAAACAACCGCCTGTACCGCGGCTaGTCCGACGTCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: VADLNCSRDLPKALLENNRLYRG*SDVSEG
Trigger: CCCCTCGGAGACGTCGGAGCAGCCGCGGTACAGGCG...GTTGTTTTCCAGAAGGGCTTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR GCA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCAACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: SALWIVTHQTTGRRNGVATCTVI*CRSSSA
Trigger: CGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGT...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGTGCTTCCGTCTCTGTaGCAAATAAGGACTCAAATG +
Preference number: 4 (lower is better)
Translates to: VCVLAGDLGDGSGFSTAGVLPSL*QIRTQM
Trigger: CATTTGAGTCCTTATTTGGCACAGAGACGGAAGCAC...CCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCGCAGAGTGGAGGGGCTaGTCTCGTGGAGTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVAEWRG*SRGVCV
Trigger: GACACACACTCCACGAGAGCAGCCCCTCCACTCTGC...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCGGACAGAACCTCTGTTaGGGCCGCCTTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGGQNLC*GRLLLS
Trigger: GCTCAGAAGAAGGCGGCCCCAACAGAGGTTCTGTCC...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCTGGTCTTCTTGTAGGTaGTTTCGCCGGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SAPPSVRWVWRDHLLPVSWSSCR*FRRMRP
Trigger: TGGACGCATCCGGCGAAACCACCTACAAGAAGACCA...GGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARRCPAG*HPSGWR
Trigger: CCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCG...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCGGTTGCTGCCTTCGCTaGGGAAGAAGATGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLGCCLR*GRRCSP
Trigger: TGGAGAGCATCTTCTTCCCCAGCGAAGGCAGCAACC...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACGGAAGTCCTGGAAGTaGTGGGCGGGGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSRKSWK*WAGVRL
Trigger: CAACCTCACCCCCGCCCACCACTTCCAGGACTTCCG...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTAGAAGAGGGAGCCACTaGCGCCCGGGTTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGRRGSH*RPGWTA
Trigger: AGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCT...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCACCTTCTCCTTCTTGCTaGCGCGCCGCTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAPSPSC*RAACRW
Trigger: CCACCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGG...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTACCGTGTCCCCATCGTaGACGAGGGCCTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPTVSPS*TRAFQV
Trigger: CACCTGGAAGGCCCTCGTCCACGATGGGGACACGGT...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCGCTCGGCATAGAAGCTaGGGCGGTGGACGGACACCG +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRARHRS*GGGRTP
Trigger: CGGTGTCCGTCCACCGCCCCAGCTTCTATGCCGAGC...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTGGCACACAGAGGTGGGACCGCTCAGGAATaGAGAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: GKWSPPLGVTPQCLAHRGGTAQE*RGMWMT
Trigger: TGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCC...ACCTCTGTGTGCCAGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTTCCTCGTCTGAGGCCTaGCTGGCAGTTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: SRGLSASICEVGVERPSPSSSEA*LAVSTS
Trigger: TGAAGTAGAAACTGCCAGCCAGGCCTCAGACGAGGA...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGTCCTCGTCCGAGGCCTaGCTGGCAGGTGCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMSSSEA*LAGAPS
Trigger: GGAGGGCGCACCTGCCAGCCAGGCCTCGGACGAGGA...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCTGTGGAGCCGGGCCTaGCCCCCTAGGCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: EGDESETKSSLPSSETSHLWSRA*PPRPCL
Trigger: GAGACATGGCCTAGGGGGCCAGGCCCGGCTCCACAG...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCCCCTCTCAGGGGTCCTaGGGAAGGGCAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIPSQGS*GRAGWV
Trigger: CACCCACCCTGCCCTTCCCCAGGACCCCTGAGAGGG...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCAGTGTGTGTCCTCGCTaGGGACCTCGGGGATGGGTC +
Preference number: 4 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRSVCPR*GPRGWV
Trigger: GACCCATCCCCGAGGTCCCCAGCGAGGACACACACT...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACTCTCCTGGGCAGAGTaGAGGGGCTGCTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSLSWAE*RGCSRG
Trigger: TCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAG...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAATGGAGTGGCATCCCTaGGGGGAGTTAAGACACACG +
Preference number: 4 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAMEWHP*GELRHT
Trigger: CGTGTGTCTTAACTCCCCCCAGGGATGCCACTCCAT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTACTCGTCGTCGCTGGTaGCGTAGAAGAGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSTRRRW*RRRGSH
Trigger: GTGGCTCCCTCTTCTACGTCACCAGCGACGACGAGT...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATGGGAGTATTGCACTaGGCCAGGTTTCGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGMGVLH*ARFRGN
Trigger: GTTCCCCCGAAACCTGGCTCAGTGCAATACTCCCAT...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGAACTCGGCCTCCTTGTaGATGACGGTCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTNSASL*MTVLMM
Trigger: CATCATCAAGACCGTCATGCACAAGGAGGCCGAGTT...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTAACTCGGCCTCCTTGTaGATGACGGTCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQANSASL*MTVLMM
Trigger: CATCATCAAGACCGTCATGCACAAGGAGGCCGAGTT...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTCCAGGGAGCAGCTTCTaGAGGAACTCGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPPGSSF*RNSASL
Trigger: CAAGGAGGCCGAGTTCCTGCAGAAGCTGCTCCCTGG...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTTGCTGGTCGATGTTGTaGACGCCCAGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSCWSML*TPSSRL
Trigger: CAGCCTGCTGCTGGGCGTGCACAACATCGACCAGCA...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGCTTATTGGTCATAATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGGCGGGTGGCTCCTCCTaGGGCCTGCCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CLLVIMTTAGPEDLTATWAGGSS*GLPSCP
Trigger: TGGACAGGATGGCAGGCCGCAGGAGGAGCCACCCGC...CCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCATTATGACCAATAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAGCGGGTGGCTCCTCCTaGGGCCTGCCATCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTAGGSS*GLPSCP
Trigger: TGGACAGGATGGCAGGCCGCAGGAGGAGCCACCCGC...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCACCTGCACTGTAATCTaGTGCAGATCCTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: MTTAGPEDLTATWGPCGVTCTVI*CRSSSA
Trigger: CGCGGAAGAGGATCTGCAGCAGATTACAGTGCAGGT...GACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGHAGST*TVICCR
Trigger: TCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTG...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCAAAACACAGAGCCCTaGCTGGGAGGTTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSQNTEP*LGGSPA
Trigger: GGCCGGAGAACCTCCCAGGCAGGGCTCTGTGTTTTG...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTGCAGAGTGGAGGGGCTaGTCTCGTGGAGTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPAEWRG*SRGVCV
Trigger: GACACACACTCCACGAGAGCAGCCCCTCCACTCTGC...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp ACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGTGGCTGACCTCAATTaGAGCCGTGATTTACCCAAA +
Preference number: 4 (lower is better)
Translates to: TWDRMTFPVTHAAQRLVRVADLN*SRDLPK
Trigger: TTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCAC...CCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GAACTTGAGGTGCATCTTGACCACGCGGGGCAGGATGTTGTTCATGACCACGACACAGCCCATAGAACTTaGGCAGCAGCGTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: ELEVHLDHAGQDVVHDHDTAHRT*AAASAG
Trigger: ACCCGCGGACGCTGCTGCCCAAGTTCTATGGGCTGT...GTCGTGGTCATGAACAACATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGACAGCCCATAGAACTTaGGCAGCAGCGTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARTAHRT*AAASAG
Trigger: ACCCGCGGACGCTGCTGCCCAAGTTCTATGGGCTGT...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTTCTTCGAAAGAAGGTaGCGTGCAGGGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGFFERR*RAGQEV
Trigger: GACCTCCTGCCCTGCACGCCACCTTCTTTCGAAGAA...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGGGACCGCTCAGGAATaGAGAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: YGAPGSTWDRMTFPVTHAGTAQE*RGMWMT
Trigger: TGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCC...TGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCCTGCGTCCTCCTCTTTaGGGACCACAATCTCCACGC +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVLRPPL*GPQSPR
Trigger: GCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAG...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATCGTCTGAGGCCTGGCTaGCAGTTTCTACTTCAACAG +
Preference number: 4 (lower is better)
Translates to: SASICEVGVERPSPPRLHRLRPG*QFLLQQ
Trigger: CTGTTGAAGTAGAAACTGCCAGCCAGGCCTCAGACG...ATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAAACCAAAGAGTGCAGTaGGCAGGGGCTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVNQRVQ*AGALLP
Trigger: AGGGAGAAGAGCCCCTGCCCACTGCACTCTTTGGTT...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCACCACCGCGAACAGCCTaGCTTCTTCCTCAGGACACA +
Preference number: 4 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAPPRTA*LLPQDT
Trigger: TGTGTCCTGAGGAAGAAGCCAGGCTGTTCGCGGTGG...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTGGTCCGCTTCCCACGTaGATGGAGGCAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGGPLPT*MEAELL
Trigger: GAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACC...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGAGTGGCCGCAGTGCTTaGCAGGGCGAGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMSGRSA*QGEGCP
Trigger: GGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACT...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTGTGGCCTCTGGGGGTTaGGCCTTTGAGATGACAATG +
Preference number: 4 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRVASGG*AFEMTM
Trigger: CATTGTCATCTCAAAGGCCCAACCCCCAGAGGCCAC...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTTGCCCACGTTCTCAGTaGACAGCAGCCATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGCPRSQ*TAAIRG
Trigger: ACCTCTGATGGCTGCTGTCCACTGAGAACGTGGGCA...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGTACAGTACAGGAATTTaGACACTGCCCACGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWYSTGI*TLPTFS
Trigger: TGAGAACGTGGGCAGTGTCCAAATTCCTGTACTGTA...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCGGTGGGCGAGGAACCTaGGATGCAAACCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGGGRGT*DANQCL
Trigger: CAAACACTGGTTTGCATCCCAGGTTCCTCGCCCACC...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CAA 72 bp TCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTaGGAGGGTGATGAGTCGGAAACAAAGTCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGLSPTTGSAAL*EGDESETKSSL
Trigger: GAGAGAAGACTTTGTTTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCCGTAGAAGTCCTGCATaGGCACGTCGCGTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRRRSPA*ARRVRA
Trigger: AGCCCGAACGCGACGTGCTCATGCAGGACTTCTACG...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCCAGGTGCATAGGTCTTaGAGCGGAAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QIRTQMRLAAREGGSHRGQVHRS*SGSPGS
Trigger: ACTTCCAGGACTTCCGCTTCAAGACCTATGCACCTG...GCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGCGGGCATGTCCTGCATaGAGTCCAGGTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARRACPA*SPGPCR
Trigger: CCTACAAGGACCTGGACTTCATGCAGGACATGCCCG...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACCGGGCATGTCCTGCATaGAGTCCAGGTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYRACPA*SPGPCR
Trigger: CCTACAAGGACCTGGACTTCATGCAGGACATGCCCG...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCAACTGCAGGATGTCGATaGTGCCAATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YGAPGSTWDRMTFPVTHATAGCR*CQCAAA
Trigger: TGCTGCTGCACATTGGCATCATCGACATCCTGCAGT...TGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCACTGCAGGATGTCGATaGTGCCAATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTTAGCR*CQCAAA
Trigger: TGCTGCTGCACATTGGCATCATCGACATCCTGCAGT...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCCACCAGGCTGTGAACTaGGGCCAAGGTCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRHQAVN*GQGRFP
Trigger: TGGGAAGCGACCTTGGCCTCAGTTCACAGCCTGGTG...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCACACAAGAATGGAAATaGAATGGTATCCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERTQEWK*NGIHRG
Trigger: ACCTCTGTGGATACCATTTCATTTCCATTCTTGTGT...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACCCTCGCGGGGGATCTaGGGGAGACCGAGTTCGCTA +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTPSRGI*GRPSSL
Trigger: TAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCCCTCGCGGGGGATCTaGGGGAGACCGAGTTCGCTA +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGPSRGI*GRPSSL
Trigger: TAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGG...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCTTCTGGAAAACAACTaGCGTCAGACACTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPRAAGEVVSTSWGHSTVLLENN*RQTLSF
Trigger: GAAGCTCAGTGTCTGACGTCAGTTGTTTTCCAGAAG...CACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCCACGGTGTAGCCGATaGCCAGCTGGATGGCACCCT +
Preference number: 4 (lower is better)
Translates to: EGDESETKSSLPSSETSHPRCSR*PAGWHP
Trigger: AGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGG...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCGCTCCTCCTGCGGCCTaGCATCCTGTCCAGACGACT +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIAPPAA*HPVQTT
Trigger: AGTCGTCTGGACAGGATGGCAGGCCGCAGGAGGAGC...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAGCGTCAGGGCCCCACTaGGGCGGGAACATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTASGPH*GGNIAA
Trigger: AGCAGCTATGTTCCCGCCGCAGTGGGGCCCTGACGC...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCATTTGCACATTTCTCCTaGAAAGGCGCGTCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSFAHFS*KGASAG
Trigger: CCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAA...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACGCGAGGAACCTGGGATaGAAACCAGTGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYARNLG*KPVFGA
Trigger: GGCCCCAAACACTGGTTTGCATCCCAGGTTCCTCGC...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGGTGGCTGACCTCAATTaGAGCCGTGATTTACCCAAA +
Preference number: 4 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTVADLN*SRDLPK
Trigger: TTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCAC...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp CTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGGCTCTCTGGGCCCCTTaGTTATTGGTCATAATGACA +
Preference number: 4 (lower is better)
Translates to: LPRAAGEVVSTSWGHSTVALWAP*LLVIMT
Trigger: TGTCATTATGACCAATAAGCAAGGGGCCCAGAGAGC...CACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTPNFFP*PGPGCA
Trigger: GGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCGCGTCCACACCTCGATaGCCCAACTTCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRASTPR*PNFFPW
Trigger: CCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGC...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCATGGTCTTCTTGTAGGTaGTTTCGCCGGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: YGAPGSTWDRMTFPVTHAWSSCR*FRRMRP
Trigger: TGGACGCATCCGGCGAAACCACCTACAAGAAGACCA...TGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCACAGCCCATAGAACTTaGGCAGCAGCGTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRTAHRT*AAASAG
Trigger: ACCCGCGGACGCTGCTGCCCAAGTTCTATGGGCTGT...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATGGGACCGCTCAGGAATaGAGAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYGTAQE*RGMWMT
Trigger: TGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCC...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGCGTCTGAGGCCTGGCTaGCAGTTTCTACTTCAACAG +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGRLRPG*QFLLQQ
Trigger: CTGTTGAAGTAGAAACTGCCAGCCAGGCCTCAGACG...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCGGACTCAAATGCGATTaGCCGCTCGGGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRGLKCD*PLGRVG
Trigger: ACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCC...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCGAGGGGCTGCTCTCGTaGAGTGTGTGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIEGLLS*SVCPRW
Trigger: CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTC...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCTGTCCTGATGGATGCTaGGAGCCACGCGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGCPDGC*EPRGWP
Trigger: CGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACA...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATTGCCCCTGTCCCTGCTaGCCATCCAGGTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: EGDESETKSSLPSSETSHCPCPC*PSRSQT
Trigger: TGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCA...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATCTCCAAAAGGGCCTTaGAGACAACACAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: HPRLGALDCHAPDHGAEESPKGP*RQHKNG
Trigger: TCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGA...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGAGGACCCCATGGCAATaGGAGTATTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PSLCQIRTQMRLAAREGGRTPWQ*EYCTEP
Trigger: TGGCTCAGTGCAATACTCCCATTGCCATGGGGTCCT...CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGCCAGGAGTGGCTGTATaGTTTCAGAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARPGVAV*FQRRPP
Trigger: TGGTGGGCGCCTCTGAAACCATACAGCCACTCCTGG...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCGGTGGGCGAGGAACCTaGGATGCAAACCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVGGRGT*DANQCL
Trigger: CAAACACTGGTTTGCATCCCAGGTTCCTCGCCCACC...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACGAGAGCTTGGGGATCTaGATTTTGACTAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: PGDGAALWSARFDVGPNDESLGI*ILTKPC
Trigger: ACACGGTTTAGTCAAAATCCAGATCCCCAAGCTCTC...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CCA 90 bp GAACTTGAGGTGCATCTTGACCACGCGGGGCAGGATGTTGTTCATGACCACGACGTTGCCTCCTGTGGCTaGAATGCAGCCGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: ELEVHLDHAGQDVVHDHDVASCG*NAAVMA
Trigger: TGCCATCACGGCTGCATTCCAGCCACAGGAGGCAAC...GTCGTGGTCATGAACAACATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR TCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATGCAGGATGTTGTTCATaGCCACGACGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYAGCCS*PRRGCS
Trigger: AGAACATCCGCGTCGTGGTCATGAACAACATCCTGC...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAGCAGGATGTTGTTCATaGCCACGACGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAAGCCS*PRRGCS
Trigger: AGAACATCCGCGTCGTGGTCATGAACAACATCCTGC...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSGEGCG*QSRGNG
Trigger: TCCATTGCCACGACTCTGTCATCCACATCCCTCTCC...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCACGTGGGCTTGTCCTaGTGGATGCTGGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGHVGLS*WMLGAT
Trigger: CGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTG...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCATGAGCACCAGGCTGTaGACTGAGGCCAAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRMSTRL*TEAKVA
Trigger: AGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCAT...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCATGGGAGTATTGCACTaGGCCAGGTTTCGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRMGVLH*ARFRGN
Trigger: GTTCCCCCGAAACCTGGCTCAGTGCAATACTCCCAT...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCTTCTGGAAAACAACTaGCGTCAGACACTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: MTTAGPEDLTATWGPCGVLLENN*RQTLSF
Trigger: GAAGCTCAGTGTCTGACGTCAGTTGTTTTCCAGAAG...GACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp TGCTTATTGGTCATAATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGTGCCGCTCGCGCTCGTaGTGGTCGATGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: CLLVIMTTAGPEDLTATWCRSRS*WSMLCT
Trigger: CGTGCACAACATCGACCAGCACGAGCGCGAGCGGCA...CCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCATTATGACCAATAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR GCA 90 bp GGGGGCAGCCGGAGCAGAAGTGGAGCTCGGCTCTGGGTCGGGGGCTGCATAGAAAAGACACACGAGGTTTaGAGTTTCATTTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GGSRSRSGARLWVGGCIEKTHEV*SFILFQ
Trigger: CTGAAACAAAATGAAACTGCAAACCTCGTGTGTCTT...TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACTTCTGCTCCGGCTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTCTCTGGGTCGGGGGCTaGATAGAAATTAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQALWVGG*IEIKSR
Trigger: TCTACTTTTAATTTCTATGCAGCCCCCGACCCAGAG...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539785.5
CDS-3UTR CCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACTGGCACCCTTCAGGGTaGAGGAGGTGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYWHPSG*RRWSSC
Trigger: ACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCA...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCAAGTCCTGGAAGTGGTaGGCGGGGGTGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIKSWKW*AGVRLL
Trigger: CAGCAACCTCACCCCCGCCCACCACTTCCAGGACTT...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCCCAGGTCCTTGTAGGTaGGGAAGCTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVPGPCR*GSSSPS
Trigger: AGAAGGAGAAGAGCTTCCCCACCTACAAGGACCTGG...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCAGGGACCGCTCAGGAATaGAGAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSGTAQE*RGMWMT
Trigger: TGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCC...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCCGCTTCCCACGTGGATaGAGGCAGAGTTGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIRFPRG*RQSCSG
Trigger: TCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCG...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAATGCCAGTTGCTGAGTaGCCTACGTTGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVMPVAE*PTLEEK
Trigger: CTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCAT...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGGCACATCTTGGAAGTaGGGGATTCCCACAGCCATC +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARGTSWK*GIPTAI
Trigger: GATGGCTGTGGGAATCCCCCACTTCCAAGATGTGCC...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGCTCTCCTGGGCAGAGTaGAGGGGCTGCTCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMLSWAE*RGCSRG
Trigger: TCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAG...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTATGTCCTGATGGATGCTaGGAGCCACGCGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLCPDGC*EPRGWP
Trigger: CGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACA...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCCTCGTCTCGGCGCTTTaGATTGTCACGCACCAGACC +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRLVSAL*IVTHQT
Trigger: GGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAG...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTGTTTGGGGCCAGGAGTaGCTGTATGGTTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGVWGQE*LYGFRG
Trigger: GCCTCTGAAACCATACAGCCACTCCTGGCCCCAAAC...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CAA 72 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTaGCTGAGTGGCCTACGTTGGAAGAGAAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: RKRLRCLGPPCQ*LSGLRWKRRTS
Trigger: ACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAGGTGGTTTCGCCGGATaGGTCCACACCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLGGFAG*VHTSMA
Trigger: GGCCATCGAGGTGTGGACGCATCCGGCGAAACCACC...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCAACTCGGCCTCCTTGTaGATGACGGTCTTGATGATG +
Preference number: 4 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVNSASL*MTVLMM
Trigger: CATCATCAAGACCGTCATGCACAAGGAGGCCGAGTT...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCCCTCCCGCTCTGTCCTaGCATGGAGAAAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIPPALS*HGENVS
Trigger: GGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGG...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGTCAGCGGAGGGAGGCTaGCCTGGACGCGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLSAEGG*PGRGAA
Trigger: GGCGGCACCGCGTCCAGGGCAGCCTCCCTCCGCTGA...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACCTTCTCCTTCTTGCTaGCGCGCCGCTTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTPSPSC*RAACRW
Trigger: CCACCTACAAGCGGCGCGCCAGCAAGAAGGAGAAGG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACCGCTCGCGCTCGTGCTaGTCGATGTTGTGCACGCCC +
Preference number: 4 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYRSRSC*SMLCTP
Trigger: GGGCGTGCACAACATCGACCAGCACGAGCGCGAGCG...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCGGGACCGCTCAGGAATaGAGAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRGTAQE*RGMWMT
Trigger: TGTCATCCACATCCCTCTCCATTCCTGAGCGGTCCC...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGCCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCGTCTGAGGCCTGGCTaGCAGTTTCTACTTCAACAG +
Preference number: 4 (lower is better)
Translates to: SLAGDTWKFPPCQSQSKRRLRPG*QFLLQQ
Trigger: CTGTTGAAGTAGAAACTGCCAGCCAGGCCTCAGACG...GCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTTCCTCGTCTGAGGCCTaGCTGGCAGTTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGSSSEA*LAVSTS
Trigger: TGAAGTAGAAACTGCCAGCCAGGCCTCAGACGAGGA...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGTCCGCTTCCCACGTaGATGGAGGCAGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMGPLPT*MEAELL
Trigger: GAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACC...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTCTGAGTGGCCTACGTTaGAAGAGAAGGACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPLSGLR*KRRTSP
Trigger: GGGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAG...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAGAGGGGCTGCTCTCGTaGAGTGTGTGTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLEGLLS*SVCPRW
Trigger: CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTC...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTCGTCGCTGGTGACGTAGAAGAGGGAGCCACTGGCGCCCGGGTTGGACAGCTCAGAATGGAAATGAAATaGTATCCACAGAGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VVAGDVEEGATGARVGQLRMEMK*YPQRFA
Trigger: TGCAAACCTCTGTGGATACCATTTCATTTCCATTCT...GAGCTGTCCAACCCGGGCGCCAGTGGCTCCCTCTTCTACGTCACCAGCGACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAATGGGGGACAGCGGGGTaGGTCCAGCAGCCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: TNTKYISKRALETTQEWKWGTAG*VQQPPS
Trigger: CGAGGGAGGCTGCTGGACCCACCCCGCTGTCCCCCA...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GTGGCGTCATACGGAGGTTGTAACAGACAAAACACAGAGCCCTGCCTGGGAGGTAGGACCCCATGGCAATaGGAGTATTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VASYGGCNRQNTEPCLGGRTPWQ*EYCTEP
Trigger: TGGCTCAGTGCAATACTCCCATTGCCATGGGGTCCT...ACCTCCCAGGCAGGGCTCTGTGTTTTGTCTGTTACAACCTCCGTATGACGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCGGTGGGCGAGGAACCTaGGATGCAAACCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRGGRGT*DANQCL
Trigger: CAAACACTGGTTTGCATCCCAGGTTCCTCGCCCACC...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGCGATGGCGGGGAGAGTAAATCCAGTACCTCCCATCCGTGAACTGGACGGGTACCCAAAGCCCTTCTaGAAAACAACTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: SAMAGRVNPVPPIRELDGYPKPF*KTTDVR
Trigger: TCTGACGTCAGTTGTTTTCCAGAAGGGCTTTGGGTA...CCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCCCGCCATCGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR TCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCACTGCAGGATGTCGATaGTGCCAATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRTAGCR*CQCAAA
Trigger: TGCTGCTGCACATTGGCATCATCGACATCCTGCAGT...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTAGGGGGCGGGGAGCCTaGCCTTCCGCCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFRGRGA*PSALSW
Trigger: CCAGCTCAGGGCGGAAGGTCAGGCTCCCCGCCCCCT...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGCACGTGGGCTTGTCCTaGTGGATGCTGGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKHVGLS*WMLGAT
Trigger: CGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTG...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATGAGACAGTACCATGGTaGAGGACCCCATGGCAATGG +
Preference number: 4 (lower is better)
Translates to: EGDESETKSSLPSSETSHETVPW*RTPWQW
Trigger: CCATTGCCATGGGGTCCTTCACCATGGTACTGTCTC...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGAGGTCGAACTTGAGGTaGATCTTGACCACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMRSNLR*ILTTRG
Trigger: GCCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCT...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGGCTTCTCATCTGAGGTaGTCTGGGCGCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKASHLR*SGRPAP
Trigger: AGGCGCAGGGCGCCCAGAGCACCTCAGATGAGAAGC...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGGGCCTTCCAGGTGTaGTCCAGTTTCTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYRAFQV*SSFLMN
Trigger: GTTCATCAAGAAACTGGAGCACACCTGGAAGGCCCT...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGGGCCGTCGGCATCCGTaGAGGGGGAGGACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLGRRHP*RGRTRS
Trigger: GGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTATCAGGCCAGATGTCCTaGACTGAGGCCCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLSGQMS*TEAPKP
Trigger: GGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGA...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACACCTCCCGCTCTGTCCTaGCATGGAGAAAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTPPALS*HGENVS
Trigger: GGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGG...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAGCAGAGTGGAGGGGCTaGTCTCGTGGAGTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLAEWRG*SRGVCV
Trigger: GACACACACTCCACGAGAGCAGCCCCTCCACTCTGC...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTGTTCTCCTTCTGTTaGCTCCTGTGGCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPLFSFC*LLWLEC
Trigger: GCATTCCAGCCACAGGAGGCAACAGAAGGAGAACAA...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCCCAGGTCCTTGTAGGTaGGGAAGCTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRPGPCR*GSSSPS
Trigger: AGAAGGAGAAGAGCTTCCCCACCTACAAGGACCTGG...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCGCGCGGCGCCACCCTaGATGGACTCCATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCRAAPP*MDSMAV
Trigger: CACGGCCATGGAGTCCATCCAGGGTGGCGCCGCGCG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAACGCCGCGCCCCTTCTTaGAGGGCGAGGACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TNTKYISKRALETTQEWKRRAPS*RARTSG
Trigger: CCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCG...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAACTTGAGGTGCATCTTGACCACGCGGGGCAGGATGTTGTTCATGACCACGACGAATGGAGAGGGATGTaGATGACAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ELEVHLDHAGQDVVHDHDEWRGM*MTESWQ
Trigger: TTGCCACGACTCTGTCATCCACATCCCTCTCCATTC...GTCGTGGTCATGAACAACATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGNIAAE*PQCLAG
Trigger: CCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTT...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCTGCTCGAGGGGCACCTaGGAGGTGGGCGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCCSRGT*EVGVRA
Trigger: GGCCCTGACGCCCACCTCCCAGGTGCCCCTCGAGCA...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACACACAGAGCCCTGCCTaGGAGGTTCTCCGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYTQSPA*EVLRPS
Trigger: AGACGGCCGGAGAACCTCCCAGGCAGGGCTCTGTGT...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGTGCCCCTGTCCCTGCTaGCCATCCAGGTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKCPCPC*PSRSQT
Trigger: TGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCA...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCCTGGCAGGAGACACATaGAAGTTTCCGCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRLAGDT*KFPPCQ
Trigger: CTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAG...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGATGCAAACCAGTGTTTaGGGCCAGGAGTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: HVLPSLCQIRTQMRLAARMQTSV*GQEWLY
Trigger: ATACAGCCACTCCTGGCCCCAAACACTGGTTTGCAT...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCATACCCAAAGCCCTTCTaGAAAACAACTGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: YGAPGSTWDRMTFPVTHAYPKPF*KTTDVR
Trigger: TCTGACGTCAGTTGTTTTCCAGAAGGGCTTTGGGTA...TGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR TCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAGGAGAGGGATGTGGATaGCAGAGTCGTGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTGEGCG*QSRGNG
Trigger: TCCATTGCCACGACTCTGTCATCCACATCCCTCTCC...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCAGGGCAGTCTGGGCTaGGTCCCACCACTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCQGSLG*VPPLGA
Trigger: CGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCCTG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAATGAGCACCAGGCTGTaGACTGAGGCCAAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLMSTRL*TEAKVA
Trigger: AGCGACCTTGGCCTCAGTTCACAGCCTGGTGCTCAT...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGGACAGGCGGAGCGATTaGACCACCGGAGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKDRRSD*TTGDEE
Trigger: CTCCTCATCTCCGGTGGTTCAATCGCTCCGCCTGTC...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCTCTGGGTCGGGGGCTaGATAGAAATTATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: EGDESETKSSLPSSETSHLWVGG*IEIMCR
Trigger: GCGACACATAATTTCTATGCAGCCCCCGACCCAGAG...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGTGCCTGGGCCCTCCATaGCAGTTGCTGAGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKCLGPP*QLLSGL
Trigger: TAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCA...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCTGGCACCCTTCAGGGTaGAGGAGGTGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGWHPSG*RRWSSC
Trigger: ACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCA...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGAGTGGCCGCAGTGCTTaGCAGGGCGAGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLSGRSA*QGEGCP
Trigger: GGGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACT...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGRSVLP*RKRLRC
Trigger: GCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCG...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGGCGGGGGCTGATGGGTaGATGCCCGGTGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLAGADG*MPGASR
Trigger: TCTGCTGGCACCGGGCATCCACCCATCAGCCCCCGC...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCAGCAGCCTCCCTCGCGGGGGATCTGAGGGAGACCGAGTTCGCTAAATATTATTACAGTACAGGAATTTaGACACTGCCCACGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PAASLAGDLRETEFAKYYYSTGI*TLPTFS
Trigger: TGAGAACGTGGGCAGTGTCCAAATTCCTGTACTGTA...ATAATATTTAGCGAACTCGGTCTCCCTCAGATCCCCCGCGAGGGAGGCTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GAGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATAGGACCCCATGGCAATaGGAGTATTGCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EGDESETKSSLPSSETSHRTPWQ*EYCTEP
Trigger: TGGCTCAGTGCAATACTCCCATTGCCATGGGGTCCT...ATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGCAGGTGCATAGGTCTTaGAGCGGAAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMQVHRS*SGSPGS
Trigger: ACTTCCAGGACTTCCGCTTCAAGACCTATGCACCTG...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAATTGAACCACCGGAGATaGGGAGGAGGTGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TNTKYISKRALETTQEWKLNHRR*GGGGRR
Trigger: GCGCCTGCCACCTCCTCCTCATCTCCGGTGGTTCAA...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGAGGTCGAACTTGAGGTaGATCTTGACCACGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKRSNLR*ILTTRG
Trigger: GCCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCT...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGAGAAAACGTCTCCGTTaGCTGGGCCCTCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKRKRLR*LGPPCQ
Trigger: CTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCTCTTGGCGTCTCTGGTaGCAGGGCTCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCSWRLW*QGSGQG
Trigger: GCCCTGCCCAGAGCCCTGGCACCAGAGACGCCAAGA...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGTGGTCTTCTTGTAGGTaGTTTCGCCGGATGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMWSSCR*FRRMRP
Trigger: TGGACGCATCCGGCGAAACCACCTACAAGAAGACCA...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCCAGGTCCTTGTAGGTaGGGAAGCTCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGPGPCR*GSSSPS
Trigger: AGAAGGAGAAGAGCTTCCCCACCTACAAGGACCTGG...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCATGCCAGTTGCTGAGTaGCCTACGTTGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIMPVAE*PTLEEK
Trigger: CTTCTCTTCCAACGTAGGCCACTCAGCAACTGGCAT...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTACAGCTCCTCACATCCTaGGCACATCTTGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLQLLTS*AHLGSG
Trigger: CCCACTTCCAAGATGTGCCCAGGATGTGAGGAGCTG...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGGAACAGCGGGTGGCGTaGCGTCATACGGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKEQRVA*RHTEVV
Trigger: TACAACCTCCGTATGACGCCACGCCACCCGCTGTTC...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CAA 72 bp TTTCAGAATCAGTTTGGCCATAAAAATGGGACTGGGTaGGGGACAGGCGGAGCGATTGAACCACCGGAGATG +
Preference number: 4 (lower is better)
Translates to: FQNQFGHKNGTG*GTGGAIEPPEM
Trigger: CATCTCCGGTGGTTCAATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTTTATGGCCAAACTGATTCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACCACGCAGGCTCCACCTaGACTGTAATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYHAGST*TVICCR
Trigger: TCTGCAGCAGATTACAGTGCAGGTGGAGCCTGCGTG...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CACACACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCGTGCTTCCGTCTCTGTaGCAAATAAGGACTCAAATG +
Preference number: 4 (lower is better)
Translates to: HTRASVSVPNKDSNAIGRVLPSL*QIRTQM
Trigger: CATTTGAGTCCTTATTTGGCACAGAGACGGAAGCAC...GCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAAAGTGGAGCTCGGCTCTaGGTCGGGGGCTGCATAGAA +
Preference number: 4 (lower is better)
Translates to: TNTKYISKRALETTQEWKSGARL*VGGCIE
Trigger: TTCTATGCAGCCCCCGACCCAGAGCCGAGCTCCACT...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGAGGCTCTGCCAGGTCTaGAGAGGAATTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMRLCQV*RGILPK
Trigger: TTTGGGAAGAATTCCTCTCCAGACCTGGCAGAGCCT...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACAAGGCTCTGCCAGGTCTaGAGAGGAATTCTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTRLCQV*RGILPK
Trigger: TTTGGGAAGAATTCCTCTCCAGACCTGGCAGAGCCT...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGTACAGACTTCTATCATaGGGGACAGCGGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SETKSSLPSSETSHHLNKYRLLS*GTAGWV
Trigger: GACCCACCCCGCTGTCCCCCATGATAGAAGTCTGTA...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCAGGGGAAGTGGGCATTaGTCACCAAGGTATTTACAG +
Preference number: 4 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIRGSGH*SPRYLQ
Trigger: CTGTAAATACCTTGGTGACCAATGCCCACTTCCCCT...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
3UTR CAA 72 bp ACAGAGCCTGGCAGGAGACACATGGAAGTTTCCGCCTaGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: TEPGRRHMEVSA*SVSEQTPFSLY
Trigger: GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACACTGCAGGATGTCGATaGTGCCAATGTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYTAGCR*CQCAAA
Trigger: TGCTGCTGCACATTGGCATCATCGACATCCTGCAGT...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCGCTGGAATGCAGCCGTaGTGGCAGGAGCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCAGMQP*WQELWQ
Trigger: CTGCCAAAGCTCCTGCCATCACGGCTGCATTCCAGC...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCCAGGGAGCAGCTTCTaGAGGAACTCGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCPGSSF*RNSASL
Trigger: CAAGGAGGCCGAGTTCCTGCAGAAGCTGCTCCCTGG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCAATGCCCCTGTCCCTaGTGGCCATCCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFQCPCP*WPSRSQ
Trigger: CTGGGACCTGGATGGCCAGCAGGGACAGGGGCATTG...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTGCTGAGTCCCACCACTaGGAGCGCTGCCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFAESHH*ERCPLG
Trigger: TCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGC...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTGACTCGAGGACTCCCTaGGAGGACTGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFDSRTP*EDWCGL
Trigger: GAGGCCACACCAGTCCTCCCAGGGAGTCCTCGAGTC...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAACCAGGAGTGGCTGTATaGTTTCAGAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TNTKYISKRALETTQEWKPGVAV*FQRRPP
Trigger: TGGTGGGCGCCTCTGAAACCATACAGCCACTCCTGG...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTTCAGGCCAGATGTCCTaGACTGAGGCCCCCAAACCC +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFSGQMS*TEAPKP
Trigger: GGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGA...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAACATAGCTGCTGAGTaGCCGCAGTGCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCNIAAE*PQCLAG
Trigger: CCCTGCCAAGCACTGCGGCCACTCAGCAGCTATGTT...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAACGCTCTGTCCTGCCATaGAGAAAACGTCTCCGTTGC +
Preference number: 4 (lower is better)
Translates to: TNTKYISKRALETTQEWKRSVLP*RKRLRC
Trigger: GCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCG...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCCTCCCGCTCTGTCCTaGCATGGAGAAAACGTCTCC +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFPPALS*HGENVS
Trigger: GGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGG...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGGGCACATCTTGGAAGTaGGGGATTCCCACAGCCATC +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLGTSWK*GIPTAI
Trigger: GATGGCTGTGGGAATCCCCCACTTCCAAGATGTGCC...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTATCTCCAAAAGGGCCTTaGAGACAACACAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLSPKGP*RQHKNG
Trigger: TCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGA...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGGCAGGATGTTGTTCATaGCCACGACGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLAGCCS*PRRGCS
Trigger: AGAACATCCGCGTCGTGGTCATGAACAACATCCTGC...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGTGCACTGTAATCTGCTaGAGATCCTCTTCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLCTVIC*RSSSAG
Trigger: ACCCGCGGAAGAGGATCTGCAGCAGATTACAGTGCA...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCTCTGGGTCGGGGGCTaGATAGAAATTATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLLWVGG*IEIMCR
Trigger: GCGACACATAATTTCTATGCAGCCCCCGACCCAGAG...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCATCCTGGGCACATCTTaGAAGTGGGGGATTCCCACA +
Preference number: 4 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCILGTS*KWGIPT
Trigger: TGTGGGAATCCCCCACTTCCAAGATGTGCCCAGGAT...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCAGCTCCTCACATCCTaGGCACATCTTGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFQLLTS*AHLGSG
Trigger: CCCACTTCCAAGATGTGCCCAGGATGTGAGGAGCTG...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCAGAATGGAAATGAAATaGTATCCACAGAGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGRMEMK*YPQRFA
Trigger: TGCAAACCTCTGTGGATACCATTTCATTTCCATTCT...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGAGAATGGAAATGAAATaGTATCCACAGAGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMRMEMK*YPQRFA
Trigger: TGCAAACCTCTGTGGATACCATTTCATTTCCATTCT...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCACTGGTCACAGAGCTaGGGAAGAAGATGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFHWSQS*GRRCSP
Trigger: TGGAGAGCATCTTCTTCCCCAGCTCTGTGACCAGTG...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR GCA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAAGACACACGAGGTTTaGAGTTTCATTTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: DESETKSSLPSSETSHHLKTHEV*SFILFQ
Trigger: CTGAAACAAAATGAAACTGCAAACCTCGTGTGTCTT...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR GCA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTGTATCCACAGAGGTTTaGACATTTCTCCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFVSTEV*TFLLQR
Trigger: CCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATAC...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR TCA 90 bp CAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGACACAAGAATGGAAATaGAATGGTATCCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: QHKNGNEMVSTEVCTFLLTQEWK*NGIHRG
Trigger: ACCTCTGTGGATACCATTTCATTTCCATTCTTGTGT...CAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCGAGTGGCCGCAGTGCTaGGCAGGGCGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: AGISRALGLSGVGSAFGGEWPQC*AGRGLS
Trigger: GGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTC...GCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCGAGTGGCCGCAGTGCTaGGCAGGGCGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSEWPQC*AGRGLS
Trigger: GGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTC...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGTCACCCCACAGGCTCTaGGCGTCTCTGGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRSPHRL*ASLVPG
Trigger: CCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTGA...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTCCACTGGCGCCCGGGTaGGACAGCTCGATCAGCGGC +
Preference number: 5 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSPLAPG*DSSISG
Trigger: GCCGCTGATCGAGCTGTCCAACCCGGGCGCCAGTGG...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGAGGACTCAAATGCGATaGGCCGCTCGGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARRTQMR*AAREGG
Trigger: CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCT...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGGCGCCAGAGGTTTTaGCTCGAGGGGCACCTGGGA +
Preference number: 5 (lower is better)
Translates to: RWGGEAGISRALGLSGVGRRQRF*LEGHLG
Trigger: TCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCCT...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCCCCACCACTCTGGGTTaGAGGGACACAGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: GGEAGISRALGLSGVGSAPTTLG*RDTAPS
Trigger: CGAGGGTGCTGTGTCCCTCAAACCCAGAGTGGTGGG...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS GCA 90 bp AAGCCACTGGGACCCAGACCCGCTGGGCTGGCGCCCTGCACGCTCTaGTCACGCCACAGGCTGGTACGCTCACCTGCTCCCCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KPLGPRPAGLAPCTL*SRHRLVRSPAPPPG
Trigger: GCCTGGCGGGGGAGCAGGTGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCCCAGCGGGTCTGGGTCCCAGTGGCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS CCA 90 bp GACCCGCTGGGCTGGCGCCCTGCACGCTCTGCTCACGCCACAGGCTaGTACGCTCACCTGCTCCCCCGCCAGGCCAGCGAAGACCGTGTC +
Preference number: 5 (lower is better)
Translates to: DPLGWRPARSAHATG*YAHLLPRQASEDRV
Trigger: GACACGGTCTTCGCTGGCCTGGCGGGGGAGCAGGTGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCCCAGCGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS-3UTR CAA 90 bp GGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGACGCGGGGCAGGATGTaGTTCATGACCACGACGCGG +
Preference number: 5 (lower is better)
Translates to: GHLPSSGPQRGGQRLRGQTRGRM*FMTTTR
Trigger: CCGCGTCGTGGTCATGAACAACATCCTGCCCCGCGT...CTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGAACTTGAGGTGCATCTaGACCACGCGGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRNLRCI*TTRGRM
Trigger: CATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTT...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCATCGTGCTGGTCGATGTaGTGCACGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RASPELWASAGWAAPSGASCWSM*CTPSSR
Trigger: CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGA...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGGAGTGGCCGCAGTGCTaGGCAGGGCGAGGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPREWPQC*AGRGLS
Trigger: GGACAGCCCTCGCCCTGCCAAGCACTGCGGCCACTC...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGGCATCCTGGGCACATCTaGGAAGTGGGGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: GRRHPCRGRTRSGGAARRHPGHI*EVGDSH
Trigger: GTGGGAATCCCCCACTTCCAAGATGTGCCCAGGATG...CCGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCTCTCGGCGCTTTGGATaGTCACGCACCAGACCACGG +
Preference number: 5 (lower is better)
Translates to: AGISRALGLSGVGSAFGGSRRFG*SRTRPR
Trigger: CCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGA...GCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCATGGACAGAACCTCTGTaGGGGCCGCCTTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: PELWASAGWAAPSGAAGAWTEPL*GPPSSE
Trigger: CTCAGAAGAAGGCGGCCCCAACAGAGGTTCTGTCCA...TGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGCGAGGAACTCGGCCTCCTaGTGCATGACGGTCTTGATG +
Preference number: 5 (lower is better)
Translates to: RPSASVQGEDEVRWGGEARNSAS*CMTVLM
Trigger: CATCAAGACCGTCATGCACAAGGAGGCCGAGTTCCT...CGCCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTTCGTGCTGGTCGATGTaGTGCACGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSSCWSM*CTPSSR
Trigger: CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGA...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCACCTGCGTCCTCCTCTTaGGGGACCACAATCTCCACG +
Preference number: 5 (lower is better)
Translates to: RASPELWASAGWAAPSGAPASSS*GTTIST
Trigger: CGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGG...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCGCTGAGTGGCCTACGTaGGAAGAGAAGGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: GGEAGISRALGLSGVGSAAEWPT*EEKDKS
Trigger: GGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGC...GGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS GCA 90 bp GTCATCCTGAAGCCACTGGGACCCAGACCCGCTGGGCTGGCGCCCTaGACGCTCTGCTCACGCCACAGGCTGGTACGCTCACCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: VILKPLGPRPAGLAP*TLCSRHRLVRSPAP
Trigger: GGGAGCAGGTGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCCCAGCGGGTCTGGGTCCCAGTGGCTTCAGGATGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS-3UTR CAA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGAACTTGAGGTGCATCTaGACCACGCGGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: ARRASPELWASAGWAAPSNLRCI*TTRGRM
Trigger: CATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTT...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS GCA 90 bp GGCGCCCTGCACGCTCTGCTCACGCCACAGGCTGGTACGCTCACCTaGTCCCCCGCCAGGCCAGCGAAGACCGTGTCATCCGATTCGATG +
Preference number: 5 (lower is better)
Translates to: GALHALLTPQAGTLT*SPARPAKTVSSDSM
Trigger: CATCGAATCGGATGACACGGTCTTCGCTGGCCTGGCGGGGGAGCAGGTGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS GCA 90 bp TCTCGGTGGGTGCACGGGAGACCCACGTGTGTCCCATCCAGAGGCTaGACCCCGGTGACCGCCCTGCCGTCTGAAAACACGTCCACCGCG +
Preference number: 5 (lower is better)
Translates to: SRWVHGRPTCVPSRG*TPVTALPSENTSTA
Trigger: CGCGGTGGACGTGTTTTCAGACGGCAGGGCGGTCACCGGGGTGCAGCCTCTGGATGGGACACACGTGGGTCTCCCGTGCACCCACCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS CCA 90 bp CACACGTGCAGCAGTCATCCTGAAGCCACTGGGACCCAGACCCGCTaGGCTGGCGCCCTGCACGCTCTGCTCACGCCACAGGCTGGTACG +
Preference number: 5 (lower is better)
Translates to: HTCSSHPEATGTQTR*AGALHALLTPQAGT
Trigger: CGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCCCAGCGGGTCTGGGTCCCAGTGGCTTCAGGATGACTGCTGCACGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS-3UTR CAA 90 bp CCTCTCCTGGGCAGAGTGGAGGGGCTGCTCTCGTGGAGTGTGTGTCCTCGCTGGACGTCGCGTTCGGGCTaGGAGCTCAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: PLLGRVEGLLSWSVCPRWTSRSG*ELRWPT
Trigger: CGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACGT...CCAGCGAGGACACACACTCCACGAGAGCAGCCCCTCCACTCTGCCCAGGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACCCACTGGCGCCCGGGTaGGACAGCTCGATCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PGDGAALWSARFDVGPNDPLAPG*DSSISG
Trigger: GCCGCTGATCGAGCTGTCCAACCCGGGCGCCAGTGG...GTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp AGCTGTGCACCTGGTGATGGTGCTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCACTGGCGCCCGGGTaGGACAGCTCGATCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SCAPGDGAALWSARFDVGPLAPG*DSSISG
Trigger: GCCGCTGATCGAGCTGTCCAACCCGGGCGCCAGTGG...TCCCACGTCGAACCGGGCGCTCCATAGGGCAGCACCATCACCAGGTGCACAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCTTGTGCATGACGGTCTaGATGATGAACTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: RWGGEAGISRALGLSGVGLCMTV*MMNSSS
Trigger: CGACGACGAGTTCATCATCAAGACCGTCATGCACAA...GCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGGTCCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCACGCGGGGCAGGATGTaGTTCATGACCACGACGCGG +
Preference number: 5 (lower is better)
Translates to: GSASHVDGGRVARDPSRPTRGRM*FMTTTR
Trigger: CCGCGTCGTGGTCATGAACAACATCCTGCCCCGCGT...GGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCCCGAGGACGCGGGGCAGGATGTaGTTCATGACCACGACGCGG +
Preference number: 5 (lower is better)
Translates to: RGLVLMDAGSHAAGRFPRTRGRM*FMTTTR
Trigger: CCGCGTCGTGGTCATGAACAACATCCTGCCCCGCGT...CCTCGGGAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACTCCCGCTGCAGCGTCTaGACCAGGGCGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QALRISQLRGAHVASQGDSRCSV*TRALKV
Trigger: CACCTTCAGCGCCCTGGTCAAGACGCTGCAGCGGGA...GTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGTCCCGCTGCAGCGTCTaGACCAGGGCGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SPAKARRPGTGVPCHSAESRCSV*TRALKV
Trigger: CACCTTCAGCGCCCTGGTCAAGACGCTGCAGCGGGA...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCTCGTGCTGGTCGATGTaGTGCACGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLSCWSM*CTPSSR
Trigger: CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGA...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGTGGATGGAGGCAGAGTaGCTCGGGACCCCAGCCGTC +
Preference number: 5 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEWMEAE*LGTPAV
Trigger: GACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCA...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCTGGATGGAGGCAGAGTaGCTCGGGACCCCAGCCGTC +
Preference number: 5 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERWMEAE*LGTPAV
Trigger: GACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCA...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGTGTGGTGGGTCTGGATaGGAGGCGCCAGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: ARRASPELWASAGWAAPSCGGSG*EAPEVF
Trigger: AAAAACCTCTGGCGCCTCCAATCCAGACCCACCACA...CGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGCCCTGCAGCCGGTGCTCGGAGAGGTTaGCTGATGGGCGGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: TISSPSPWPCGSEPGPAAGARRG*LMGGES
Trigger: TGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACC...GGCTGCAGGGCCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS TCA 90 bp TGCACGGGAGACCCACGTGTGTCCCATCCAGAGGCTGCACCCCGGTaGCCGCCCTGCCGTCTGAAAACACGTCCACCGCGGGCACTGAAG +
Preference number: 5 (lower is better)
Translates to: CTGDPRVSHPEAAPR*PPCRLKTRPPRALK
Trigger: CTTCAGTGCCCGCGGTGGACGTGTTTTCAGACGGCAGGGCGGTCACCGGGGTGCAGCCTCTGGATGGGACACACGTGGGTCTCCCGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS-3UTR CAA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGTGGACAGAACCTCTGTaGGGGCCGCCTTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVWTEPL*GPPSSE
Trigger: CTCAGAAGAAGGCGGCCCCAACAGAGGTTCTGTCCA...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTCCACTGGCGCCCGGGTaGGACAGCTCGATCAGCGGC +
Preference number: 5 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAPLAPG*DSSISG
Trigger: GCCGCTGATCGAGCTGTCCAACCCGGGCGCCAGTGG...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGTGGCTGGCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGCCCTTGAGGTCGAACTaGAGGTGCATCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: RWLASRWLRGTELPRAAGPLRSN*RCILTT
Trigger: CGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGG...CCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGCCAGCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CCCTCTGAGCACGCAGGGAGGACCCCACGTGGGCTTGTCCTGATGGATGCTGGGTCACCCCACAGGCTCTaGGCGTCTCTGGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSEHAGRTPRGLVLMDAGSPHRL*ASLVPG
Trigger: CCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTGA...CCCAGCATCCATCAGGACAAGCCCACGTGGGGTCCTCCCTGCGTGCTCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CCCGGCCGTCGGCATCCGTGCAGGGGGAGGACGAGGTCCGGTGGGGCGGCGAGGTTACAGTACAGGAATTaGGACACTGCCCACGTTCTC +
Preference number: 5 (lower is better)
Translates to: PGRRHPCRGRTRSGGAARLQYRN*DTAHVL
Trigger: GAGAACGTGGGCAGTGTCCAAATTCCTGTACTGTAA...CCTCGCCGCCCCACCGGACCTCGTCCTCCCCCTGCACGGATGCCGACGGCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCATGGAAGTTTCCGCCTaGTCAGTCTCAGAGCAAACG +
Preference number: 5 (lower is better)
Translates to: AGISRALGLSGVGSAFGGMEVSA*SVSEQT
Trigger: CGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCAT...GCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGGAGGTCTCGGCGCTTTGGATaGTCACGCACCAGACCACGG +
Preference number: 5 (lower is better)
Translates to: CKGASAGHWCPVSLSGGRSRRFG*SRTRPR
Trigger: CCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGA...CCTCCCTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGCGCCTGCCGCTCGCGCTCGTGCTGGTCGATGTTGTGCACGCCCAGCAGCAGGCCTCGTCTCGGCGCTTaGGATTGTCACGCACCAGAC +
Preference number: 5 (lower is better)
Translates to: CACRSRSCWSMLCTPSSRPRLGA*DCHAPD
Trigger: GTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGG...CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGAGCGCGAGCGGCAGGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTCCCACCACTCTGGGTTaGAGGGACACAGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSPTTLG*RDTAPS
Trigger: CGAGGGTGCTGTGTCCCTCAAACCCAGAGTGGTGGG...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGGATGCAAACCAGTGTTaGGGGCCAGGAGTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWDANQC*GPGVAV
Trigger: TACAGCCACTCCTGGCCCCAAACACTGGTTTGCATC...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ATGGGCGGGGAGTCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCAGTGGTCTCCACCTCTaGGGGTCACTCCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: MGGESRRPRRRLCLEGTLSGLHL*GSLHSA
Trigger: GGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACT...GAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGACTCCCCGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS GCA 90 bp GTGCCGGGGCAGGGGCAGGACCGAGGACCCTTCTCCCTTCTCTGCTaGCCACCTGGCAGGGCATCAGGACACAGACACACAGCACGACAT +
Preference number: 5 (lower is better)
Translates to: VPGQGQDRGPFSLLC*PPGRASGHRHTARH
Trigger: ATGTCGTGCTGTGTGTCTGTGTCCTGATGCCCTGCCAGGTGGGCAGCAGAGAAGGGAGAAGGGTCCTCGGTCCTGCCCCTGCCCCGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS CCA 90 bp GCAGGGGCAGGACCGAGGACCCTTCTCCCTTCTCTGCTGCCCACCTaGCAGGGCATCAGGACACAGACACACAGCACGACATGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: AGAGPRTLLPSLLPT*QGIRTQTHSTTWPP
Trigger: TGGGGGCCATGTCGTGCTGTGTGTCTGTGTCCTGATGCCCTGCCAGGTGGGCAGCAGAGAAGGGAGAAGGGTCCTCGGTCCTGCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CAA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGACGTCGCGTTCGGGCTaGGAGCTCAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTTSRSG*ELRWPT
Trigger: CGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACGT...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGAGGAACTCGGCCTCCTaGTGCATGACGGTCTTGATG +
Preference number: 5 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVRNSAS*CMTVLM
Trigger: CATCAAGACCGTCATGCACAAGGAGGCCGAGTTCCT...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGACGCGGGGCAGGATGTaGTTCATGACCACGACGCGG +
Preference number: 5 (lower is better)
Translates to: VWRDHLLPVSMALRFRARTRGRM*FMTTTR
Trigger: CCGCGTCGTGGTCATGAACAACATCCTGCCCCGCGT...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TGGAGTGTGTGTCCTCGCTGGGGACCTCGGGGATGGGTCCGGCTTCTCCACAGCACGCGGGGCAGGATGTaGTTCATGACCACGACGCGG +
Preference number: 5 (lower is better)
Translates to: WSVCPRWGPRGWVRLLHSTRGRM*FMTTTR
Trigger: CCGCGTCGTGGTCATGAACAACATCCTGCCCCGCGT...GCTGTGGAGAAGCCGGACCCATCCCCGAGGTCCCCAGCGAGGACACACACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGCCTGCGTCCTCCTCTTaGGGGACCACAATCTCCACG +
Preference number: 5 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEPASSS*GTTIST
Trigger: CGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGG...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGGCTGAGTGGCCTACGTaGGAAGAGAAGGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVAEWPT*EEKDKS
Trigger: GGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGC...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CACCCTCGTCTCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATCACCCCACAGGCTCTaGGCGTCTCTGGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: HPRLGALDCHAPDHGAEESPHRL*ASLVPG
Trigger: CCCTGGCACCAGAGACGCCAAGAGCCTGTGGGGTGA...TTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCATCTCCAAAAGGGCCTaGGAGACAACACAAGAATGG +
Preference number: 5 (lower is better)
Translates to: WGGEAGISRALGLSGVGSISKRA*ETTQEW
Trigger: CCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGAT...GCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCATCTCCAAAAGGGCCTaGGAGACAACACAAGAATGG +
Preference number: 5 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSISKRA*ETTQEW
Trigger: CCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGAT...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGGCCTCGGCGGAGGCTTaGTCTCGAGGGGACACTCCT +
Preference number: 5 (lower is better)
Translates to: RISQLRGAHVASQGDLLEASAEA*SRGDTP
Trigger: AGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGC...CTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CTAGCAAGGCTCCGCCGCGCCCCTTCTTGGAGGGCGAGGACTTCAGGGAGGAGTGTGATGGCAGGAGCTTaGGCAGCCACCTGGGACCAC +
Preference number: 5 (lower is better)
Translates to: LARLRRAPSWRARTSGRSVMAGA*AATWDH
Trigger: GTGGTCCCAGGTGGCTGCCAAAGCTCCTGCCATCAC...ACTCCTCCCTGAAGTCCTCGCCCTCCAAGAAGGGGCGCGGCGGAGCCTTGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp TCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGGGTTGTTCTCCTTCTGTaGCCTCCTGTGGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: SGPQRGGQRLRGQPEQKWVVLLL*PPVAGM
Trigger: CATTCCAGCCACAGGAGGCAACAGAAGGAGAACAAC...CCACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCACGTCGCGTTCGGGCTaGGAGCTCAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLTSRSG*ELRWPT
Trigger: CGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACGT...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp ACAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTCCACTGGCGCCCGGGTaGGACAGCTCGATCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TAAIRGDPGGEVGIGHQGPLAPG*DSSISG
Trigger: GCCGCTGATCGAGCTGTCCAACCCGGGCGCCAGTGG...ACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCAGGGTGGGTGACTCTGCCGAGCTCTGGCCTCCAACCAGCACCCTCTGAGCGCAACTTGAGGTGCATCTaGACCACGCGGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: AGWVTLPSSGLQPAPSERNLRCI*TTRGRM
Trigger: CATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTT...GCGCTCAGAGGGTGCTGGTTGGAGGCCAGAGCTCGGCAGAGTCACCCACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCTCCCGCTGCAGCGTCTaGACCAGGGCGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SAPPSVRWVWRDHLLPVSSRCSV*TRALKV
Trigger: CACCTTCAGCGCCCTGGTCAAGACGCTGCAGCGGGA...GGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCCCTGCGTCCTCCTCTTaGGGGACCACAATCTCCACG +
Preference number: 5 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVPASSS*GTTIST
Trigger: CGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGG...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCGGCCCTCCATGCCAGTaGCTGAGTGGCCTACGTTGG +
Preference number: 5 (lower is better)
Translates to: TPASSSLGTTISTLHAGSGPPCQ*LSGLRW
Trigger: CCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCC...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp GCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCAGAAGTGAGGGGAAGTGGGCATaGGTCACCAAGGTATTTACA +
Preference number: 5 (lower is better)
Translates to: ALGLSGVGSAFGGSRSRSEGKWA*VTKVFT
Trigger: TGTAAATACCTTGGTGACCAATGCCCACTTCCCCTC...ACTTCTGCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS CCA 90 bp GTTTCGCCGGATGCGTCCACACCTCGATGGCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCCGTCATGGACAGAACCTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VSPDASTPRWPNFFP*PGPGCAVMDRTSVG
Trigger: CCCAACAGAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGCATCCGGCGAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335312.8
ENST00000537021.1
ENST00000539785.5
ENST00000587482.1
ENST00000589578.5
ENST00000679828.1
ENST00000679885.1
CDS CCA 90 bp CCTTCAGGGTGGAGGAGGTGGTCTCGATGGCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCCGTCATGGACAGAACCTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: PSGWRRWSRWPNFFP*PGPGCAVMDRTSVG
Trigger: CCCAACAGAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGGCCATCGAGACCACCTCCTCCACCCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636612.1
CDS-3UTR CAA 90 bp TGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCACGCGGGGCAGGATGTaGTTCATGACCACGACGCGG +
Preference number: 5 (lower is better)
Translates to: CLEQPGKWSPPLGVTPQCTRGRM*FMTTTR
Trigger: CCGCGTCGTGGTCATGAACAACATCCTGCCCCGCGT...GCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGAACTTGAGGTGCATCTaGACCACGCGGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: VWRDHLLPVSMALRFRARNLRCI*TTRGRM
Trigger: CATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTT...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTCCCTTGAGGTCGAACTaGAGGTGCATCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSPLRSN*RCILTT
Trigger: CGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGG...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGTTCCGAAAGACCGTGTaGCTCATGAACTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: VGRRGGHLPSSGPQRGGQFRKTV*LMNLKK
Trigger: CTTTTTCAAGTTCATGAGCAACACGGTCTTTCGGAA...CTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGAGGTCCGGTGGGGCGGCGAGGCGGGCATCTCCCGAGCTCTGGGCCTCAGCGGTTCCGAAAGACCGTGTaGCTCATGAACTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: RGPVGRRGGHLPSSGPQRFRKTV*LMNLKK
Trigger: CTTTTTCAAGTTCATGAGCAACACGGTCTTTCGGAA...CCGCTGAGGCCCAGAGCTCGGGAGATGCCCGCCTCGCCGCCCCACCGGACCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCCCTGCGTCCTCCTCTTaGGGGACCACAATCTCCACG +
Preference number: 5 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCPASSS*GTTIST
Trigger: CGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGG...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ACCCCACGTGGGCTTGTCCTGATGGATGCTGGGAGCCACGCGGCTGGCCGGTTCAAAAATGGGACTGGGTaGGGGACAGGCGGAGCGATT +
Preference number: 5 (lower is better)
Translates to: TPRGLVLMDAGSHAAGRFKNGTG*GTGGAI
Trigger: AATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTTT...GAACCGGCCAGCCGCGTGGCTCCCAGCATCCATCAGGACAAGCCCACGTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGGATGCAAACCAGTGTTaGGGGCCAGGAGTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SPAKARRPGTGVPCHSAEDANQC*GPGVAV
Trigger: TACAGCCACTCCTGGCCCCAAACACTGGTTTGCATC...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCGGCTCTCTGGGCCCCTaGCTTATTGGTCATAATGAC +
Preference number: 5 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVGSLGP*LIGHND
Trigger: GTCATTATGACCAATAAGCAAGGGGCCCAGAGAGCC...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TGGATTTTGACTAAACCGTGTGGTCTCCCAGGCTCCCAGGGGAGCCGAGGCCTCGCCTCGGCGGAGGCTTaGTCTCGAGGGGACACTCCT +
Preference number: 5 (lower is better)
Translates to: WILTKPCGLPGSQGSRGLASAEA*SRGDTP
Trigger: AGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGC...GAGGCCTCGGCTCCCCTGGGAGCCTGGGAGACCACACGGTTTAGTCAAAATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGGGTGCTCGGAGAGGTTaGCTGATGGGCGGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: PSVRWVWRDHLLPVSMALGARRG*LMGGES
Trigger: TGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACC...CAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCAACGTCGCGTTCGGGCTaGGAGCTCAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRATSRSG*ELRWPT
Trigger: CGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACGT...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCTTCCCGCTGGCTCCGTGGGACGGAGCTGCCTAGAGCAGCCGGGGAAGTGGTCTTGTGCATGACGGTCTaGATGATGAACTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: ASRWLRGTELPRAAGEVVLCMTV*MMNSSS
Trigger: CGACGACGAGTTCATCATCAAGACCGTCATGCACAA...GACCACTTCCCCGGCTGCTCTAGGCAGCTCCGTCCCACGGAGCCAGCGGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp ATGCCCCTGTCCCTGCTGGCCATCCAGGTCCCAGACACCCCTTCTGACCTCTGCAACTTGAGGTGCATCTaGACCACGCGGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: MPLSLLAIQVPDTPSDLCNLRCI*TTRGRM
Trigger: CATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTT...GCAGAGGTCAGAAGGGGTGTCTGGGACCTGGATGGCCAGCAGGGACAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCTCCCGCTGCAGCGTCTaGACCAGGGCGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTSRCSV*TRALKV
Trigger: CACCTTCAGCGCCCTGGTCAAGACGCTGCAGCGGGA...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGGCATCTCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCATTCCGAAAGACCGTGTaGCTCATGAACTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: RASPELWASAGWAAPSGAFRKTV*LMNLKK
Trigger: CTTTTTCAAGTTCATGAGCAACACGGTCTTTCGGAA...TGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGAGATGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTCCTGCGTCCTCCTCTTaGGGGACCACAATCTCCACG +
Preference number: 5 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAPASSS*GTTIST
Trigger: CGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGG...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CTGCCCTATGGAGCGCCCGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCCTGCGTCCTCCTCTTaGGGGACCACAATCTCCACG +
Preference number: 5 (lower is better)
Translates to: LPYGAPGSTWDRMTFPVTPASSS*GTTIST
Trigger: CGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGG...CGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCGGGCGCTCCATAGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAAGGACTCAAATGCGATaGGCCGCTCGGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRARTQMR*AAREGG
Trigger: CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ACCTCGGGGATGGGTCCGGCTTCTCCACAGCAGGGGCCTTCCGGGCGCAGCGTGGGTATCCACAGAGGTTaGCACATTTCTCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: TSGMGPASPQQGPSGRSVGIHRG*HISPAK
Trigger: CTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACC...CACGCTGCGCCCGGAAGGCCCCTGCTGTGGAGAAGCCGGACCCATCCCCGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGCCTCCCGCTCTGTCCTGCCATGGAGAAAACGTCTCCGTTGCCTGGGCCCTCAAAAATGGGACTGGGTaGGGGACAGGCGGAGCGATT +
Preference number: 5 (lower is better)
Translates to: RPPALSCHGENVSVAWALKNGTG*GTGGAI
Trigger: AATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTTT...GAGGGCCCAGGCAACGGAGACGTTTTCTCCATGGCAGGACAGAGCGGGAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGGCAGTCTGGGCTGAGTCCCACCACTGGGAGCGCTGCCCTCTTGGAGGGTGATAAAAATGGGACTGGGTaGGGGACAGGCGGAGCGATT +
Preference number: 5 (lower is better)
Translates to: GQSGLSPTTGSAALLEGDKNGTG*GTGGAI
Trigger: AATCGCTCCGCCTGTCCCCAACCCAGTCCCATTTTT...ATCACCCTCCAAGAGGGCAGCGCTCCCAGTGGTGGGACTCAGCCCAGACTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCCCGAGCTCTGGGCCTCAGCGGGGTGGGCAGCGCCTTCGGGGGCAGCCGGAGCTGTTTCAGAATCAGTTaGGCCATAAAAATGGGACTG +
Preference number: 5 (lower is better)
Translates to: SRALGLSGVGSAFGGSRSCFRIS*AIKMGL
Trigger: CAGTCCCATTTTTATGGCCAAACTGATTCTGAAACA...GCTCCGGCTGCCCCCGAAGGCGCTGCCCACCCCGCTGAGGCCCAGAGCTCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCACCCACCACTCTGGGTTaGAGGGACACAGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRAPTTLG*RDTAPS
Trigger: CGAGGGTGCTGTGTCCCTCAAACCCAGAGTGGTGGG...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CTGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGAGTGGTCTCCACCTCTaGGGGTCACTCCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: LPRAAGEVVSTSWGHSTVSGLHL*GSLHSA
Trigger: GGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACT...CACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS CCA 90 bp GCTTGGAGCTCAGGTGGCCCACGGTGTAGCCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGGAGGTGGTCTTCTTGTAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: AWSSGGPRCSRCPAG*HPSGWRRWSSCRWF
Trigger: AAACCACCTACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGGGCCACCTGAGCTCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335312.8
ENST00000537021.1
ENST00000539785.5
ENST00000587482.1
ENST00000589578.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AGCCGAGGCCTCAGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTTGGACAGAACCTCTGTaGGGGCCGCCTTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SRGLSASICEVGVERPSPWTEPL*GPPSSE
Trigger: CTCAGAAGAAGGCGGCCCCAACAGAGGTTCTGTCCA...AGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCTGAGGCCTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCAACGTCGCGTTCGGGCTaGGAGCTCAGGTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSTSRSG*ELRWPT
Trigger: CGTGGGCCACCTGAGCTCCAAGCCCGAACGCGACGT...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTCCTGCAAAGGCGCGTCGGCCGGGCACTGGTGTCCCGTGTCACTCAGCGGAGTTGTGCATGACGGTCTaGATGATGAACTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: SPAKARRPGTGVPCHSAELCMTV*MMNSSS
Trigger: CGACGACGAGTTCATCATCAAGACCGTCATGCACAA...CTCCGCTGAGTGACACGGGACACCAGTGCCCGGCCGACGCGCCTTTGCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CCGCTTCCCACGTGGATGGAGGCAGAGTTGCTCGGGACCCCAGCCGTCCCCTCTTTGTGCATGACGGTCTaGATGATGAACTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: PLPTWMEAELLGTPAVPSLCMTV*MMNSSS
Trigger: CGACGACGAGTTCATCATCAAGACCGTCATGCACAA...AGAGGGGACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCACGTGGGAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGCCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCAACTTGAGGTGCATCTaGACCACGCGGGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: CLEQPGKWSPPLGVTPQCNLRCI*TTRGRM
Trigger: CATCCTGCCCCGCGTGGTCAAGATGCACCTCAAGTT...GCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp GGGAGAGTAAATCCAGTACCTCCCATCCGTGAACTGGACGGGGCGGGCCGGGTGCCCTTGAGGTCGAACTaGAGGTGCATCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: GRVNPVPPIRELDGAGRVPLRSN*RCILTT
Trigger: CGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGG...CACCCGGCCCGCCCCGTCCAGTTCACGGATGGGAGGTACTGGATTTACTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CAA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCATGGATGGAGGCAGAGTaGCTCGGGACCCCAGCCGTC +
Preference number: 5 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRAWMEAE*LGTPAV
Trigger: GACGGCTGGGGTCCCGAGCAACTCTGCCTCCATCCA...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTCATCCTGGGCACATCTaGGAAGTGGGGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQAHPGHI*EVGDSH
Trigger: GTGGGAATCCCCCACTTCCAAGATGTGCCCAGGATG...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS CCA 90 bp CCGAAAGGGAAGGGCTGTTGTTCTCCTTCTGTTGCCTCCTGTGGCTaGAATGCAGCCGTGATGGCAGGAGCTTTGGCAGCCACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PKGKGCCSPSVASCG*NAAVMAGALAATWD
Trigger: GTCCCAGGTGGCTGCCAAAGCTCCTGCCATCACGGCTGCATTCCAGCCACAGGAGGCAACAGAAGGAGAACAACAGCCCTTCCCTTTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp AGCGCCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATTGGACAGAACCTCTGTaGGGGCCGCCTTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SASICEVGVERPSPPRLHWTEPL*GPPSSE
Trigger: CTCAGAAGAAGGCGGCCCCAACAGAGGTTCTGTCCA...ATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CCTCCATCTGTGAGGTGGGTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCAGGAACTCGGCCTCCTaGTGCATGACGGTCTTGATG +
Preference number: 5 (lower is better)
Translates to: PPSVRWVWRDHLLPVSMARNSAS*CMTVLM
Trigger: CATCAAGACCGTCATGCACAAGGAGGCCGAGTTCCT...GGCCATGGAGACGGGGAGGAGATGGTCTCTCCACACCCACCTCACAGATGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TCGGCGCTTTGGATTGTCACGCACCAGACCACGGGGCGGAGGAATGGAGTGGCACCCTTGAGGTCGAACTaGAGGTGCATCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: SALWIVTHQTTGRRNGVAPLRSN*RCILTT
Trigger: CGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGG...TGCCACTCCATTCCTCCGCCCCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCATCCCGCTGCAGCGTCTaGACCAGGGCGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSSRCSV*TRALKV
Trigger: CACCTTCAGCGCCCTGGTCAAGACGCTGCAGCGGGA...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCCGGGCATCGTGCTGGTCGATGTaGTGCACGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MVSTEVCTFLLQRRVGRASCWSM*CTPSSR
Trigger: CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGA...TGCCCGGCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCACGGCGGCCTCGGCGGAGGCTTTGTCTCGAGGGGACACTCCTGCTTTGGGTCGACCTCCTTGAGAGCTaGGGGATCTGGATTTTGACT +
Preference number: 5 (lower is better)
Translates to: SRRPRRRLCLEGTLLLWVDLLES*GIWILT
Trigger: AGTCAAAATCCAGATCCCCAAGCTCTCAAGGAGGTC...GACCCAAAGCAGGAGTGTCCCCTCGAGACAAAGCCTCCGCCGAGGCCGCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TGCCTGGCACACAGAGGTGCTCGGAGAGGTTTGCTGATGGGCGGGGAGTCACGGGGCTCTCTGGGCCCCTaGCTTATTGGTCATAATGAC +
Preference number: 5 (lower is better)
Translates to: CLAHRGARRGLLMGGESRGSLGP*LIGHND
Trigger: GTCATTATGACCAATAAGCAAGGGGCCCAGAGAGCC...CCGTGACTCCCCGCCCATCAGCAAACCTCTCCGAGCACCTCTGTGTGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGCCACTGGCGCCCGGGTaGGACAGCTCGATCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMPLAPG*DSSISG
Trigger: GCCGCTGATCGAGCTGTCCAACCCGGGCGCCAGTGG...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ATGACAACAGCAGGCCCTGAGGATCTCACAGCTACGTGGGGCCCATGTGGCGTCAGGAACTCGGCCTCCTaGTGCATGACGGTCTTGATG +
Preference number: 5 (lower is better)
Translates to: MTTAGPEDLTATWGPCGVRNSAS*CMTVLM
Trigger: CATCAAGACCGTCATGCACAAGGAGGCCGAGTTCCT...GACGCCACATGGGCCCCACGTAGCTGTGAGATCCTCAGGGCCTGCTGTTGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CGATGTTCAGGCCAGATGTCCTGCACTGAGGCCCCCAAACCCAAGCTGAGGGCAAGGAACTCGGCCTCCTaGTGCATGACGGTCTTGATG +
Preference number: 5 (lower is better)
Translates to: RCSGQMSCTEAPKPKLRARNSAS*CMTVLM
Trigger: CATCAAGACCGTCATGCACAAGGAGGCCGAGTTCCT...TGCCCTCAGCTTGGGTTTGGGGGCCTCAGTGCAGGACATCTGGCCTGAACATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GACATTCCCAGTGACGCATGCAGCCCAGCGCCTGGTCCGGGGCCAGCGTGGCTGTTCCGAAAGACCGTGTaGCTCATGAACTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: DIPSDACSPAPGPGPAWLFRKTV*LMNLKK
Trigger: CTTTTTCAAGTTCATGAGCAACACGGTCTTTCGGAA...CAGCCACGCTGGCCCCGGACCAGGCGCTGGGCTGCATGCGTCACTGGGAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTAGGCGCCAGAGGTTTTaGCTCGAGGGGCACCTGGGA +
Preference number: 5 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPRRQRF*LEGHLG
Trigger: TCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCCT...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTGGGAGCGCTGCCCTCTaGGAGGGTGATGAGTCGGAA +
Preference number: 5 (lower is better)
Translates to: SLCQIRTQMRLAAREGGSGSAAL*EGDESE
Trigger: TTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCCC...AGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTACATCCTGGGCACATCTaGGAAGTGGGGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVHPGHI*EVGDSH
Trigger: GTGGGAATCCCCCACTTCCAAGATGTGCCCAGGATG...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GTGTGGAGAGACCATCTCCTCCCCGTCTCCATGGCCCTGCGGTTCAGAGCCCGGTTGGGGATCTGGATTTaGACTAAACCGTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: VWRDHLLPVSMALRFRARLGIWI*TKPCGL
Trigger: GAGACCACACGGTTTAGTCAAAATCCAGATCCCCAA...CCGGGCTCTGAACCGCAGGGCCATGGAGACGGGGAGGAGATGGTCTCTCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp ATCTCACAGCTACGTGGGGCCCATGTGGCGTCCCAGGGGGACCTCCTTGAGAGCGACCTCCTTGAGAGCTaGGGGATCTGGATTTTGACT +
Preference number: 5 (lower is better)
Translates to: ISQLRGAHVASQGDLLESDLLES*GIWILT
Trigger: AGTCAAAATCCAGATCCCCAAGCTCTCAAGGAGGTC...GCTCTCAAGGAGGTCCCCCTGGGACGCCACATGGGCCCCACGTAGCTGTGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS CCA 90 bp ATGTCCGAAAGGGAAGGGCTGTTGTTCTCCTTCTGTTGCCTCCTGTaGCTGGAATGCAGCCGTGATGGCAGGAGCTTTGGCAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: MSEREGLLFSFCCLL*LECSRDGRSFGSHL
Trigger: CAGGTGGCTGCCAAAGCTCCTGCCATCACGGCTGCATTCCAGCCACAGGAGGCAACAGAAGGAGAACAACAGCCCTTCCCTTTCGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp GGTCCGGGGCCAGCGTGGCTGACCTCAATTGCAGCCGTGATTTACCCAAAGCCCTTGTGCATGACGGTCTaGATGATGAACTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GPGPAWLTSIAAVIYPKPLCMTV*MMNSSS
Trigger: CGACGACGAGTTCATCATCAAGACCGTCATGCACAA...GGGCTTTGGGTAAATCACGGCTGCAATTGAGGTCAGCCACGCTGGCCCCGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537021.1
CDS-3UTR CAA 90 bp CAGCAGCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTAGCTGAGTGGCCTACGTaGGAAGAGAAGGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: QQPSEVTQEGKWALVTKVAEWPT*EEKDKS
Trigger: GGACTTGTCCTTCTCTTCCAACGTAGGCCACTCAGC...TACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ACCCCTGCGTCCTCCTCTTTGGGGACCACAATCTCCACGCTGCACGCAGGCTCCTTACAGTACAGGAATTaGGACACTGCCCACGTTCTC +
Preference number: 5 (lower is better)
Translates to: TPASSSLGTTISTLHAGSLQYRN*DTAHVL
Trigger: GAGAACGTGGGCAGTGTCCAAATTCCTGTACTGTAA...GGAGCCTGCGTGCAGCGTGGAGATTGTGGTCCCCAAAGAGGAGGACGCAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp CCTGGCAGGAGACACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTCCTCGTCTCGGCGCTTaGGATTGTCACGCACCAGAC +
Preference number: 5 (lower is better)
Translates to: PGRRHMEVSALSVSEQTPPRLGA*DCHAPD
Trigger: GTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGG...AGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTGTCTCCTGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCATGGACAGAACCTCTGTaGGGGCCGCCTTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSWTEPL*GPPSSE
Trigger: CTCAGAAGAAGGCGGCCCCAACAGAGGTTCTGTCCA...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCTCCCGCTGCAGCGTCTaGACCAGGGCGCTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGSRCSV*TRALKV
Trigger: CACCTTCAGCGCCCTGGTCAAGACGCTGCAGCGGGA...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACAGGGGCAGGCTTTACAGTACAGGAATTaGGACACTGCCCACGTTCTC +
Preference number: 5 (lower is better)
Translates to: KDSNAIGRSGGWVSQGQALQYRN*DTAHVL
Trigger: GAGAACGTGGGCAGTGTCCAAATTCCTGTACTGTAA...AGCCTGCCCCTGTGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CGGTTCGACGTGGGACCGAATGACATTCCCAGTGACGCATGCAGCCCAGCGCCTTTGGGGATCTGGATTTaGACTAAACCGTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RFDVGPNDIPSDACSPAPLGIWI*TKPCGL
Trigger: GAGACCACACGGTTTAGTCAAAATCCAGATCCCCAA...AGGCGCTGGGCTGCATGCGTCACTGGGAATGTCATTCGGTCCCACGTCGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCAAGGAACTCGGCCTCCTaGTGCATGACGGTCTTGATG +
Preference number: 5 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSRNSAS*CMTVLM
Trigger: CATCAAGACCGTCATGCACAAGGAGGCCGAGTTCCT...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCTCACCCTTGAGGTCGAACTaGAGGTGCATCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: SVPNKDSNAIGRSGGWVSPLRSN*RCILTT
Trigger: CGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGG...TGAGACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335312.8
ENST00000539785.5
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGTCGTGCTGGTCGATGTaGTGCACGCCCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRRGSGHWSPRYLQTSIMSCWSM*CTPSSR
Trigger: CCTGCTGCTGGGCGTGCACAACATCGACCAGCACGA...CATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCGAGAAAACGTCTCCGTaGCCTGGGCCCTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIEKTSP*PGPSMP
Trigger: TGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTC...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AGAAAACGTCTCCGTTGCCTGGGCCCTCCATGCCAGTTGCTGAGTGGCCTACGTATGGAAGTTTCCGCCTaGTCAGTCTCAGAGCAAACG +
Preference number: 5 (lower is better)
Translates to: RKRLRCLGPPCQLLSGLRMEVSA*SVSEQT
Trigger: CGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCAT...ACGTAGGCCACTCAGCAACTGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGCAAACCAGTGTTTGGGGCCAGGAGTGGCTGTATGGTTTCAGAGGCGCCCACCATGGAAGTTTCCGCCTaGTCAGTCTCAGAGCAAACG +
Preference number: 5 (lower is better)
Translates to: CKPVFGARSGCMVSEAPTMEVSA*SVSEQT
Trigger: CGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCAT...GGTGGGCGCCTCTGAAACCATACAGCCACTCCTGGCCCCAAACACTGGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCCCTCGTCTCGGCGCTTaGGATTGTCACGCACCAGAC +
Preference number: 5 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIPRLGA*DCHAPD
Trigger: GTCTGGTGCGTGACAATCCAAAGCGCCGAGACGAGG...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CCTAGAGCAGCCGGGGAAGTGGTCTCCACCTCTTGGGGTCACTCCACAGTGCCTTTCCGAAAGACCGTGTaGCTCATGAACTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: PRAAGEVVSTSWGHSTVPFRKTV*LMNLKK
Trigger: CTTTTTCAAGTTCATGAGCAACACGGTCTTTCGGAA...AGGCACTGTGGAGTGACCCCAAGAGGTGGAGACCACTTCCCCGGCTGCTCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537021.1
ENST00000589578.5
CDS-3UTR CAA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAGGACTCAAATGCGATaGGCCGCTCGGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DESETKSSLPSSETSHHLRTQMR*AAREGG
Trigger: CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCT...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GGGGAAGTGGGCATTGGTCACCAAGGTATTTACAGACTTCTATCATGGGGGACATCTCGGCGCTTTGGATaGTCACGCACCAGACCACGG +
Preference number: 5 (lower is better)
Translates to: GEVGIGHQGIYRLLSWGTSRRFG*SRTRPR
Trigger: CCGTGGTCTGGTGCGTGACAATCCAAAGCGCCGAGA...TGTCCCCCATGATAGAAGTCTGTAAATACCTTGGTGACCAATGCCCACTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CACGTGCTTCCGTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAAAGGGAAGGGCTGTaGTTCTCCTTCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: HVLPSLCQIRTQMRLAAREREGL*FSFCCL
Trigger: GAGGCAACAGAAGGAGAACAACAGCCCTTCCCTTTC...CCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGACGGAAGCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS-3UTR CAA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCTGTGGTGGGTCTGGATaGGAGGCGCCAGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHICGGSG*EAPEVF
Trigger: AAAAACCTCTGGCGCCTCCAATCCAGACCCACCACA...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTAAACAAGGGGAGCGCTGCCCTCTaGGAGGGTGATGAGTCGGAA +
Preference number: 5 (lower is better)
Translates to: SETKSSLPSSETSHHLNKGSAAL*EGDESE
Trigger: TTCCGACTCATCACCCTCCAAGAGGGCAGCGCTCCC...CTTGTTTAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCGGTATCCACAGAGGTTaGCACATTTCTCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVGIHRG*HISPAK
Trigger: CTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACC...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GTCTCTGTGCCAAATAAGGACTCAAATGCGATTGGCCGCTCGGGAGGGTGGGTCATCTCCAAAAGGGCCTaGGAGACAACACAAGAATGG +
Preference number: 5 (lower is better)
Translates to: VSVPNKDSNAIGRSGGWVISKRA*ETTQEW
Trigger: CCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGAT...GACCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCTTATTTGGCACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GCCATCAGAGGTGACCCAGGAGGGGAAGTGGGCATTGGTCACCAAGGTATTTACGAGGGGAAGTGGGCATaGGTCACCAAGGTATTTACA +
Preference number: 5 (lower is better)
Translates to: AIRGDPGGEVGIGHQGIYEGKWA*VTKVFT
Trigger: TGTAAATACCTTGGTGACCAATGCCCACTTCCCCTC...GTAAATACCTTGGTGACCAATGCCCACTTCCCCTCCTGGGTCACCTCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AGGGTGATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCGATGCAAACCAGTGTTaGGGGCCAGGAGTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: RVMSRKQSLLSPPRRHHIDANQC*GPGVAV
Trigger: TACAGCCACTCCTGGCCCCAAACACTGGTTTGCATC...GATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAAGGCCCTCCATGCCAGTaGCTGAGTGGCCTACGTTGG +
Preference number: 5 (lower is better)
Translates to: TNTKYISKRALETTQEWKGPPCQ*LSGLRW
Trigger: CCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCC...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAGGACTCAAATGCGATaGGCCGCTCGGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCRTQMR*AAREGG
Trigger: CCCACCCTCCCGAGCGGCCAATCGCATTTGAGTCCT...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCGGCCCTCCATGCCAGTaGCTGAGTGGCCTACGTTGG +
Preference number: 5 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCGPPCQ*LSGLRW
Trigger: CCAACGTAGGCCACTCAGCAACTGGCATGGAGGGCC...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp GATGAGTCGGAAACAAAGTCTTCTCTCCCCTCCTCGGAGACATCACATCACTTATTGTGCATGACGGTCTaGATGATGAACTCGTCGTCG +
Preference number: 5 (lower is better)
Translates to: DESETKSSLPSSETSHHLLCMTV*MMNSSS
Trigger: CGACGACGAGTTCATCATCAAGACCGTCATGCACAA...TAAGTGATGTGATGTCTCCGAGGAGGGGAGAGAAGACTTTGTTTCCGACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTAGGCGCCAGAGGTTTTaGCTCGAGGGGCACCTGGGA +
Preference number: 5 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFRRQRF*LEGHLG
Trigger: TCCCAGGTGCCCCTCGAGCAAAAACCTCTGGCGCCT...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp TGGAGACAACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTGAGAAAACGTCTCCGTaGCCTGGGCCCTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: WRQHKNGNEMVSTEVCTFEKTSP*PGPSMP
Trigger: TGGCATGGAGGGCCCAGGCAACGGAGACGTTTTCTC...AAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTTGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AACACAAGAATGGAAATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCCCCTTGAGGTCGAACTaGAGGTGCATCTTGACCACG +
Preference number: 5 (lower is better)
Translates to: NTRMEMKWYPQRFAHFSCPLRSN*RCILTT
Trigger: CGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGG...GCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATTTCCATTCTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp ACCAACACCAAGTATATCTCCAAAAGGGCCTTGGAGACAACACAAGAATGGAAAGAGGGGAAGTGGGCATaGGTCACCAAGGTATTTACA +
Preference number: 5 (lower is better)
Translates to: TNTKYISKRALETTQEWKEGKWA*VTKVFT
Trigger: TGTAAATACCTTGGTGACCAATGCCCACTTCCCCTC...TTTCCATTCTTGTGTTGTCTCCAAGGCCCTTTTGGAGATATACTTGGTGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp AATGAAATGGTATCCACAGAGGTTTGCACATTTCTCCTGCAAAGGCGCGTCGGCTGTTTCAGAATCAGTTaGGCCATAAAAATGGGACTG +
Preference number: 5 (lower is better)
Translates to: NEMVSTEVCTFLLQRRVGCFRIS*AIKMGL
Trigger: CAGTCCCATTTTTATGGCCAAACTGATTCTGAAACA...GCCGACGCGCCTTTGCAGGAGAAATGTGCAAACCTCTGTGGATACCATTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACTTCCGAAAGACCGTGTaGCTCATGAACTTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYFRKTV*LMNLKK
Trigger: CTTTTTCAAGTTCATGAGCAACACGGTCTTTCGGAA...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS-3UTR CAA 90 bp CACATGGAAGTTTCCGCCTTGTCAGTCTCAGAGCAAACGCCTTTTAGTCTTTACTGTTTCAGAATCAGTTaGGCCATAAAAATGGGACTG +
Preference number: 5 (lower is better)
Translates to: HMEVSALSVSEQTPFSLYCFRIS*AIKMGL
Trigger: CAGTCCCATTTTTATGGCCAAACTGATTCTGAAACA...GTAAAGACTAAAAGGCGTTTGCTCTGAGACTGACAAGGCGGAAACTTCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335312.8
ENST00000679828.1
ENST00000679885.1
CDS GCA 72 bp GGACCCAGACCCGCTGGGCTGGCGCCCTGCACGCTCTaGTCACGCCACAGGCTGGTACGCTCACCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: GPRPAGLAPCTL*SRHRLVRSPAP
Trigger: GGGAGCAGGTGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCCCAGCGGGTCTGGGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS GCA 72 bp AGCCCTGCCAGCGCCCCTCGGCCCCCATGGGCACTGTaGTGCTCTCGGTGGGTGCACGGGAGACCCACGTGT +
Preference number: 6 (lower is better)
Translates to: SPASAPRPPWAL*CSRWVHGRPTC
Trigger: ACACGTGGGTCTCCCGTGCACCCACCGAGAGCAGCACAGTGCCCATGGGGGCCGAGGGGCGCTGGCAGGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS CCA 72 bp GGCTGGCGCCCTGCACGCTCTGCTCACGCCACAGGCTaGTACGCTCACCTGCTCCCCCGCCAGGCCAGCGAA +
Preference number: 6 (lower is better)
Translates to: GWRPARSAHATG*YAHLLPRQASE
Trigger: TTCGCTGGCCTGGCGGGGGAGCAGGTGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS GCA 72 bp AAGCCACTGGGACCCAGACCCGCTGGGCTGGCGCCCTaGACGCTCTGCTCACGCCACAGGCTGGTACGCTCA +
Preference number: 6 (lower is better)
Translates to: KPLGPRPAGLAP*TLCSRHRLVRS
Trigger: TGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCCCAGCGGGTCTGGGTCCCAGTGGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS TCA 72 bp GACCCACGTGTGTCCCATCCAGAGGCTGCACCCCGGTaGCCGCCCTGCCGTCTGAAAACACGTCCACCGCGG +
Preference number: 6 (lower is better)
Translates to: DPRVSHPEAAPR*PPCRLKTRPPR
Trigger: CCGCGGTGGACGTGTTTTCAGACGGCAGGGCGGTCACCGGGGTGCAGCCTCTGGATGGGACACACGTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS GCA 72 bp CACGCTCTGCTCACGCCACAGGCTGGTACGCTCACCTaGTCCCCCGCCAGGCCAGCGAAGACCGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: HALLTPQAGTLT*SPARPAKTVSS
Trigger: GGATGACACGGTCTTCGCTGGCCTGGCGGGGGAGCAGGTGAGCGTACCAGCCTGTGGCGTGAGCAGAGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS CCA 72 bp AGCAGTCATCCTGAAGCCACTGGGACCCAGACCCGCTaGGCTGGCGCCCTGCACGCTCTGCTCACGCCACAG +
Preference number: 6 (lower is better)
Translates to: SSHPEATGTQTR*AGALHALLTPQ
Trigger: CTGTGGCGTGAGCAGAGCGTGCAGGGCGCCAGCCCAGCGGGTCTGGGTCCCAGTGGCTTCAGGATGACTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587482.1
CDS GCA 72 bp GTGCACGGGAGACCCACGTGTGTCCCATCCAGAGGCTaGACCCCGGTGACCGCCCTGCCGTCTGAAAACACG +
Preference number: 6 (lower is better)
Translates to: VHGRPTCVPSRG*TPVTALPSENT
Trigger: CGTGTTTTCAGACGGCAGGGCGGTCACCGGGGTGCAGCCTCTGGATGGGACACACGTGGGTCTCCCGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS CCA 72 bp TCAGGTGGCCCACGGTGTAGCCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGGAGGTGGTCTCGATGG +
Preference number: 6 (lower is better)
Translates to: SGGPRCSRCPAG*HPSGWRRWSRW
Trigger: CCATCGAGACCACCTCCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGGGCCACCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636612.1
CDS GCA 72 bp ATGGCCCAACTTCTTCCCATGGCCAGGGCCCGGCTGTaGCGTCATGGACAGAACCTCTGTTGGGGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: MAQLLPMARARL*RHGQNLCWGRL
Trigger: AAGGCGGCCCCAACAGAGGTTCTGTCCATGACGGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000335312.8
ENST00000537021.1
ENST00000539785.5
ENST00000587482.1
ENST00000589578.5
ENST00000636612.1
ENST00000679828.1
ENST00000679885.1
CDS GCA 72 bp GAATGCGACTTGGTGGAGCAGCCCATAGCTTTGCTCTaGTGCCGGGTCAGAACTGCCGCCGCCCCGCTCTCT +
Preference number: 6 (lower is better)
Translates to: ECDLVEQPIALL*CRVRTAAAPLS
Trigger: AGAGAGCGGGGCGGCGGCAGTTCTGACCCGGCAGCAGAGCAAAGCTATGGGCTGCTCCACCAAGTCGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS CCA 72 bp GATGCGTCCACACCTCGATGGCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCCGTCATGGACAGAACC +
Preference number: 6 (lower is better)
Translates to: DASTPRWPNFFP*PGPGCAVMDRT
Trigger: GGTTCTGTCCATGACGGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGGCCATCGAGGTGTGGACGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335312.8
ENST00000537021.1
ENST00000539785.5
ENST00000587482.1
ENST00000589578.5
ENST00000679828.1
ENST00000679885.1
CDS CCA 72 bp TGGAGGAGGTGGTCTCGATGGCCCAACTTCTTCCCATaGCCAGGGCCCGGCTGTGCCGTCATGGACAGAACC +
Preference number: 6 (lower is better)
Translates to: WRRWSRWPNFFP*PGPGCAVMDRT
Trigger: GGTTCTGTCCATGACGGCACAGCCGGGCCCTGGCCATGGGAAGAAGTTGGGCCATCGAGACCACCTCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636612.1
CDS CAA 72 bp GCAACTGAATGCGACTTGGTGGAGCAGCCCATAGCTTaGCTCTGCTGCCGGGTCAGAACTGCCGCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: ATECDLVEQPIA*LCCRVRTAAAP
Trigger: CGGGGCGGCGGCAGTTCTGACCCGGCAGCAGAGCAAAGCTATGGGCTGCTCCACCAAGTCGCATTCAGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS CAA 90 bp GCACTGAAGGCAACTGAATGCGACTTGGTGGAGCAGCCCATAGCTTaGCTCTGCTGCCGGGTCAGAACTGCCGCCGCCCCGCTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: ALKATECDLVEQPIA*LCCRVRTAAAPLSA
Trigger: GGCAGAGAGCGGGGCGGCGGCAGTTCTGACCCGGCAGCAGAGCAAAGCTATGGGCTGCTCCACCAAGTCGCATTCAGTTGCCTTCAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS CCA 72 bp TCAGGTGGCCCACGGTGTAGCCGATGCCCAGCTGGATaGCACCCTTCAGGGTGGAGGAGGTGGTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: SGGPRCSRCPAG*HPSGWRRWSSC
Trigger: ACAAGAAGACCACCTCCTCCACCCTGAAGGGTGCCATCCAGCTGGGCATCGGCTACACCGTGGGCCACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335312.8
ENST00000537021.1
ENST00000539785.5
ENST00000587482.1
ENST00000589578.5
ENST00000679828.1
ENST00000679885.1
CDS CAA 72 bp TCCTGTGGCTGGAATGCAGCCGTGATGGCAGGAGCTTaGGCAGCCACCTGGGACCACTGGTCACAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SCGWNAAVMAGA*AATWDHWSQSW
Trigger: CCAGCTCTGTGACCAGTGGTCCCAGGTGGCTGCCAAAGCTCCTGCCATCACGGCTGCATTCCAGCCACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS CCA 72 bp AATGCAGCCGTGATGGCAGGAGCTTTGGCAGCCACCTaGGACCACTGGTCACAGAGCTGGGGAAGAAGATGC +
Preference number: 6 (lower is better)
Translates to: NAAVMAGALAAT*DHWSQSWGRRC
Trigger: GCATCTTCTTCCCCAGCTCTGTGACCAGTGGTCCCAGGTGGCTGCCAAAGCTCCTGCCATCACGGCTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS CCA 72 bp AGGGAAGGGCTGTTGTTCTCCTTCTGTTGCCTCCTGTaGCTGGAATGCAGCCGTGATGGCAGGAGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: REGLLFSFCCLL*LECSRDGRSFG
Trigger: GCCAAAGCTCCTGCCATCACGGCTGCATTCCAGCCACAGGAGGCAACAGAAGGAGAACAACAGCCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS GCA 72 bp AAAACACGTCCACCGCGGGCACTGAAGGCAACTGAATaGGACTTGGTGGAGCAGCCCATAGCTTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: KTRPPRALKATE*DLVEQPIALLC
Trigger: GCAGAGCAAAGCTATGGGCTGCTCCACCAAGTCGCATTCAGTTGCCTTCAGTGCCCGCGGTGGACGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS TCA 72 bp TCTGAAAACACGTCCACCGCGGGCACTGAAGGCAACTaGATGCGACTTGGTGGAGCAGCCCATAGCTTTGCT +
Preference number: 6 (lower is better)
Translates to: SENTSTAGTEGN*MRLGGAAHSFA
Trigger: AGCAAAGCTATGGGCTGCTCCACCAAGTCGCATTCAGTTGCCTTCAGTGCCCGCGGTGGACGTGTTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637724.1
CDS TCA 72 bp GTGAGGTTGCTGCCTTCGGTGACTGCACTCAGCCAATaGCACGAGTGGAGCAGAAACACTGGTCATGTCCGA +
Preference number: 6 (lower is better)
Translates to: VRLLPSVTALSQ*HEWSRNTGHVR
Trigger: TCGGACATGACCAGTGTTTCTGCTCCACTCGTGTCATTGGCTGAGTGCAGTCACCGAAGGCAGCAACCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS CAA 90 bp ACGAGTGGAGCAGAAACACTGGTCATGTCCGAAAGGGAAGGGCTGTaGTTCTCCTTCTGTTGCCTCCTGTGGCTGGAATGCAGCCGTGAT +
Preference number: 6 (lower is better)
Translates to: TSGAETLVMSEREGL*FSFCCLLWLECSRD
Trigger: ATCACGGCTGCATTCCAGCCACAGGAGGCAACAGAAGGAGAACAACAGCCCTTCCCTTTCGGACATGACCAGTGTTTCTGCTCCACTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS CAA 72 bp GCAGAAACACTGGTCATGTCCGAAAGGGAAGGGCTGTaGTTCTCCTTCTGTTGCCTCCTGTGGCTGGAATGC +
Preference number: 6 (lower is better)
Translates to: AETLVMSEREGL*FSFCCLLWLEC
Trigger: GCATTCCAGCCACAGGAGGCAACAGAAGGAGAACAACAGCCCTTCCCTTTCGGACATGACCAGTGTTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1
CDS CCA 72 bp TGCACTCAGCCAATGACACGAGTGGAGCAGAAACACTaGTCATGTCCGAAAGGGAAGGGCTGTTGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: CTQPMTRVEQKH*SCPKGKGCCSP
Trigger: AGGAGAACAACAGCCCTTCCCTTTCGGACATGACCAGTGTTTCTGCTCCACTCGTGTCATTGGCTGAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679828.1