RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIP4P2 (Homo sapiens)

Ensembl gene IDs: ENSG00000155099

Ensembl transcript IDs: ENST00000285419.8, ENST00000518359.5, ENST00000518869.1, ENST00000520014.1, ENST00000520709.5, ENST00000630164.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAGGTGGGAGCTCCGCTCAAGGAAACA +
Preference number: 1 (lower is better)
Translates to: GTHGSLLLEYHWRLD*QWLYMEVGAPLKET
Trigger: TGTTTCCTTGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CCA 90 bp CAGGAATGTGTTTCCACAGTGCCCACACACGACCCTTGTACCTTCTaGTTGGATTGGCAATGCAGGCTGAGCTGGTTGTTCTTCAGAAAT +
Preference number: 1 (lower is better)
Translates to: QECVSTVPTHDPCTF*LDWQCRLSWLFFRN
Trigger: ATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGTGGGCACTGTGGAAACACATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR TCA 90 bp CCACACACGACCCTTGTACCTTCTGGTTGGATTGGCAATGCAGGCTaGGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCAAGGTTA +
Preference number: 1 (lower is better)
Translates to: PHTTLVPSGWIGNAG*AGCSSEISITGPRL
Trigger: TAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CCA 90 bp GTTTCCACAGTGCCCACACACGACCCTTGTACCTTCTGGTTGGATTaGCAATGCAGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTAC +
Preference number: 1 (lower is better)
Translates to: VSTVPTHDPCTFWLD*QCRLSWLFFRNKHY
Trigger: GTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGTGGGCACTGTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CCA 90 bp TGGCAATGCAGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTaGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCTTGGGCATCC +
Preference number: 1 (lower is better)
Translates to: WQCRLSWLFFRNKHY*AKVNYPSTVGSWAS
Trigger: GGATGCCCAAGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CAA 90 bp GTTCCATCCACAGGAATGTGTTTCCACAGTGCCCACACACGACCCTaGTACCTTCTGGTTGGATTGGCAATGCAGGCTGAGCTGGTTGTT +
Preference number: 2 (lower is better)
Translates to: VPSTGMCFHSAHTRP*YLLVGLAMQAELVV
Trigger: AACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGTGGGCACTGTGGAAACACATTCCTGTGGATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CAA 90 bp GAATGTGTTTCCACAGTGCCCACACACGACCCTTGTACCTTCTGGTaGGATTGGCAATGCAGGCTGAGCTGGTTGTTCTTCAGAAATAAG +
Preference number: 2 (lower is better)
Translates to: ECVSTVPTHDPCTFW*DWQCRLSWLFFRNK
Trigger: CTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGTGGGCACTGTGGAAACACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CAA 90 bp GGCAGATCAATCCTAGGAGATAAGCAATTGCCCAAGAAACATAGGTaGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACC +
Preference number: 2 (lower is better)
Translates to: GRSILGDKQLPKKHR*LEIALQNLGCQQLT
Trigger: GGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTGCTTATCTCCTAGGATTGATCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR-3UTR GCA 90 bp TTAATTATCCGTCTACAGTTGGGTCTTGGGCATCCTATTCGCCGAGATGTGTCCTCCAATGGTAATATATaGACAGCAGCGTCTTCGTGG +
Preference number: 2 (lower is better)
Translates to: LIIRLQLGLGHPIRRDVSSNGNI*TAASSW
Trigger: CCACGAAGACGCTGCTGTGCATATATTACCATTGGA...GGACACATCTCGGCGAATAGGATGCCCAAGACCCAACTGTAGACGGATAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp CATCCTATTCGCCGAGATGTGTCCTTACAAATGAGAAGACAATTACAAGGGCATGGCTGTATATGGAGGTaGGAGCTCCGCTCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: HPIRRDVSLQMRRQLQGHGCIWR*ELRSRK
Trigger: TTTCCTTGAGCGGAGCTCCCACCTCCATATACAGCC...ATGCCCTTGTAATTGTCTTCTCATTTGTAAGGACACATCTCGGCGAATAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp AGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCAAGGTTAATTATGGCAATGGCTGTATATaGAGGTGGGAGCTCCGCTCA +
Preference number: 2 (lower is better)
Translates to: RLSWLFFRNKHYWAKVNYGNGCI*RWELRS
Trigger: TGAGCGGAGCTCCCACCTCCATATACAGCCATTGCC...ATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR GCA 90 bp ACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCACTTGGTTGGATTGGCAATaGAGGCTGAGCTGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: TYHSNGNICTAASSWKCTWLDWQ*RLSWLF
Trigger: GAACAACCAGCTCAGCCTGCATTGCCAATCCAACCA...AGTGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp AGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCAAGGTTAATTATCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAG +
Preference number: 2 (lower is better)
Translates to: RLSWLFFRNKHYWAKVNYHWRLD*QWLYME
Trigger: CTCCATATACAGCCATTGCCAGTCCAGACGCCAGTG...ATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp AATAAGCATTACTGGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCTTGGGCAAATACCACTGGCGTCTaGACTGGCAATGGCTGTATA +
Preference number: 2 (lower is better)
Translates to: NKHYWAKVNYPSTVGSWANTTGV*TGNGCI
Trigger: TATACAGCCATTGCCAGTCCAGACGCCAGTGGTATT...TGCCCAAGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp ATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCACTACCCTTATCCGTCTACAGTTaGGTCTTGGGCATCCTATTC +
Preference number: 2 (lower is better)
Translates to: IIPMVIYAQQRLRGSALPLSVYS*VLGILF
Trigger: GAATAGGATGCCCAAGACCCAACTGTAGACGGATAA...GGGTAGTGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR GCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTCCAATGGTAATATATaGACAGCAGCGTCTTCGTGG +
Preference number: 2 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYSNGNI*TAASSW
Trigger: CCACGAAGACGCTGCTGTGCATATATTACCATTGGA...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR-3UTR GCA 90 bp ATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCATGCTCGAAATCGCCTTaGAAAATCTGGGGTGCCAAC +
Preference number: 2 (lower is better)
Translates to: IHIIPMVIYAQQRLRGSACSKSP*KIWGAN
Trigger: GTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCA...TGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR-3UTR GCA 90 bp AGCTTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACATGCTCGAAATCGCCTTaGAAAATCTGGGGTGCCAAC +
Preference number: 2 (lower is better)
Translates to: SLCKTVFWITDSYGSPITCSKSP*KIWGAN
Trigger: GTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCA...TGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR-3UTR CCA 90 bp TTGCCATCCAAATTGATTAGTGATTGGCACACACGGCAGTTTATTACTGGAATACGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: LPSKLISDWHTRQFITGIRLDWQ*LYMEVG
Trigger: TCCCACCTCCATATACAGCCATTGCCAGTCCAGACG...TATTCCAGTAATAAACTGCCGTGTGTGCCAATCACTAATCAATTTGGATGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp CCAACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTTTACTGGAATACCACTaGCGTCTGGACTGGCAATGG +
Preference number: 2 (lower is better)
Translates to: PTPMKIHIIPMVIYAQQRLLEYH*RLDWQW
Trigger: CCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAA...ACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp ATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCAATATTTCTTGCCTGTTaGGGGGTTTTTGATTGGCGT +
Preference number: 2 (lower is better)
Translates to: IHIIPMVIYAQQRLRGSAIFLAC*GVFDWR
Trigger: ACGCCAATCAAAAACCCCCCAACAGGCAAGAAATAT...TGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CCA 90 bp CCAACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTTGCAAAACTGTGTTCTaGATAACTGACTCTTATGGC +
Preference number: 2 (lower is better)
Translates to: PTPMKIHIIPMVIYAQQRCKTVF*ITDSYG
Trigger: GCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCA...ACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAACAACATCTCCAACTGTaGACAAATAAATATTCGTTC +
Preference number: 2 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKQHLQL*TNKYSF
Trigger: GAACGAATATTTATTTGTCCACAGTTGGAGATGTTG...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
3UTR CCA 72 bp GGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAGGTGGGAGCTCCGCTC +
Preference number: 3 (lower is better)
Translates to: GSLLLEYHWRLD*QWLYMEVGAPL
Trigger: GAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CCA 72 bp GTTTCCACAGTGCCCACACACGACCCTTGTACCTTCTaGTTGGATTGGCAATGCAGGCTGAGCTGGTTGTTC +
Preference number: 3 (lower is better)
Translates to: VSTVPTHDPCTF*LDWQCRLSWLF
Trigger: GAACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGTGGGCACTGTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CCA 72 bp CACACGGCAGTTTATTACTGGAATACCACTGGCGTCTaGACTGGCAATGGCTGTATATGGAGGTGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: HTAVYYWNTTGV*TGNGCIWRWEL
Trigger: GAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CCA 72 bp TTATTACTGGAATACCACTGGCGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGAGCTCCGCTCAAGGAA +
Preference number: 3 (lower is better)
Translates to: LLLEYHWRLDWQ*LYMEVGAPLKE
Trigger: TTCCTTGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CCA 72 bp ATTGGCACACACGGCAGTTTATTACTGGAATACCACTaGCGTCTGGACTGGCAATGGCTGTATATGGAGGTG +
Preference number: 3 (lower is better)
Translates to: IGTHGSLLLEYH*RLDWQWLYMEV
Trigger: CACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR TCA 72 bp ACCCTTGTACCTTCTGGTTGGATTGGCAATGCAGGCTaGGCTGGTTGTTCTTCAGAAATAAGCATTACTGGG +
Preference number: 3 (lower is better)
Translates to: TLVPSGWIGNAG*AGCSSEISITG
Trigger: CCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CAA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTCCCAAGAAACATAGGTaGCTCGAAATCGCCTTGCAA +
Preference number: 3 (lower is better)
Translates to: KMSRVAYQELLDTLTCITPKKHR*LEIALQ
Trigger: TTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGG...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR-3UTR CAA 90 bp ATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCATTGCTCGAAATCGCCTaGCAAAATCTGGGGTGCCAA +
Preference number: 3 (lower is better)
Translates to: IHIIPMVIYAQQRLRGSALLEIA*QNLGCQ
Trigger: TTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAA...TGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR CCA 72 bp AGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTaGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: RLSWLFFRNKHY*AKVNYPSTVGS
Trigger: AGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CAA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACCTAGGAGATAAGCAATaGCCCAAGAAACATAGGTTG +
Preference number: 3 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYLGDKQ*PKKHRL
Trigger: CAACCTATGTTTCTTGGGCAATTGCTTATCTCCTAG...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR-3UTR CAA 90 bp ACACTCTCACCTGCATTACTGAATCATAAACAAGCTTATGCAAAACTGTGTTCTTTGCTCGAAATCGCCTaGCAAAATCTGGGGTGCCAA +
Preference number: 3 (lower is better)
Translates to: TLSPALLNHKQAYAKLCSLLEIA*QNLGCQ
Trigger: TTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAA...AGAACACAGTTTTGCATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR CCA 72 bp ACAATTACAAGGGCATCTAACATATTTCTTGCCTGTTaGGGGGTTTTTGATTGGCGTAGCTTCATTGCAAAC +
Preference number: 3 (lower is better)
Translates to: TITRASNIFLAC*GVFDWRSFIAN
Trigger: GTTTGCAATGAAGCTACGCCAATCAAAAACCCCCCAACAGGCAAGAAATATGTTAGATGCCCTTGTAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR-3UTR CAA 90 bp CCAACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCCCAAGAAACATAGGTaGCTCGAAATCGCCTTGCAA +
Preference number: 3 (lower is better)
Translates to: PTPMKIHIIPMVIYAQQRPKKHR*LEIALQ
Trigger: TTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGG...ACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR TCA 72 bp TTACCAAGAACTGCTAGACACTCTCACCTGCATTACTaGATCATAAACAAGCTTATGCAAAACTGTGTTCTG +
Preference number: 3 (lower is better)
Translates to: LPRTARHSHLHY*IINKLMQNCVL
Trigger: CAGAACACAGTTTTGCATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp ACACACGACCCTTGTACCTTCTGGTTGGATTGGCAATGCAGGCTGAGCTGGTTGAGGCCGAGCCGGGGTTaGGGCCTCGGCGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: THDPCTFWLDWQCRLSWLRPSRG*GLGGVV
Trigger: CACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCT...CAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp GGAATACCACTGGCGTCTGGACTGGCAATGGCTGTATATGGAGGTGGGAGCTCCCGGAGTGGTGGCTACTaGTGCTGCCTCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GIPLASGLAMAVYGGGSSRSGGY*CCLCCR
Trigger: GCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCG...GGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp ACACACGACCCTTGTACCTTCTGGTTGGATTGGCAATGCAGGCTGAGCTGGTTGGCGGCCTCGGCGGAGTaGTGGCTACTGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: THDPCTFWLDWQCRLSWLAASAE*WLLLLP
Trigger: AGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCGC...CAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp AGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACCCAACTCATCAGCAGCCATGACTaGGGCAGCGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLLEIALQNLGCQQLTQLISSHD*GSGGAW
Trigger: CCAGGCCCCGCCGCTGCCGCAGTCATGGCTGCTGAT...GAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp ATTGGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTGGCAAGCCTCGGCGGAGTGGTaGCTACTGCTGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IGTHGSLLLEYHWRLDWQASAEW*LLLLPL
Trigger: CAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGC...TTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTTGCCTCTGCTGCCGCTaGTGCCGCTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITCLCCR*CRCSCC
Trigger: GCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCA...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR GCA 90 bp GCATCCTATTCGCCGAGATGTGTCCTTACAAATGAGAAGACAATTACAAGGGCATGCTGCTGCCTCTGCTaGCGCTGCTGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASYSPRCVLTNEKTITRACCCLC*RCCRCS
Trigger: GCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCA...TGCCCTTGTAATTGTCTTCTCATTTGTAAGGACACATCTCGGCGAATAGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp CGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACCCAACTCCAATGAAACGGAGTGGTGGCTACTaGTGCTGCCTCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RNRLAKSGVPTVNPTPMKRSGGY*CCLCCR
Trigger: GCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCG...TTTCATTGGAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS-3UTR GCA 90 bp TTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCAGGCCGAGCCGGGGTTaGGGCCTCGGCGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LCKTVFWITDSYGSPITSRPSRG*GLGGVV
Trigger: CACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCT...GCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp AGCTTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGGCCGAGCCGGGGTTaGGGCCTCGGCGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLCKTVFWITDSYGSPITRPSRG*GLGGVV
Trigger: CACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCT...TGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACATCAGCAGCCATGACTaGGGCAGCGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYISSHD*GSGGAW
Trigger: CCAGGCCCCGCCGCTGCCGCAGTCATGGCTGCTGAT...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp AATAAGCATTACTGGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCTTGGGCAATCAGCAGCCATGACTaGGGCAGCGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NKHYWAKVNYPSTVGSWAISSHD*GSGGAW
Trigger: CCAGGCCCCGCCGCTGCCGCAGTCATGGCTGCTGAT...TGCCCAAGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp TATTACTGGAATACCACTGGCGTCTGGACTGGCAATGGCTGTATATGGAGGTGGCTGGGGCTGCTTTCTTaGAAGTACGGTGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: YYWNTTGVWTGNGCIWRWLGLLS*KYGGAV
Trigger: CACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAG...CCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp AGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACCCAACTCCTGGGGCTGCTTTCTTaGAAGTACGGTGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RLLEIALQNLGCQQLTQLLGLLS*KYGGAV
Trigger: CACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAG...GAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
3UTR CAA 72 bp TCCACAGTGCCCACACACGACCCTTGTACCTTCTGGTaGGATTGGCAATGCAGGCTGAGCTGGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: STVPTHDPCTFW*DWQCRLSWLFF
Trigger: GAAGAACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGTGGGCACTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp TTCATTGCAAACTGTGCACTTAACCACATGCTGGTGAAGCTTGCCATCCAAATTTGCCTCTGCTGCCGCTaGTGCCGCTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FIANCALNHMLVKLAIQICLCCR*CRCSCC
Trigger: GCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCA...AATTTGGATGGCAAGCTTCACCAGCATGTGGTTAAGTGCACAGTTTGCAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACCGGAGTGGTGGCTACTaGTGCTGCCTCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYRSGGY*CCLCCR
Trigger: GCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCG...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR CCA 90 bp TTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCTCGGATAAGGCAGATGCCTCGGCGGAGTGGTaGCTACTGCTGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FWITDSYGSPITSSDKADASAEW*LLLLPL
Trigger: CAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGC...ATCTGCCTTATCCGAGCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS-3UTR CCA 90 bp ACACACGACCCTTGTACCTTCTGGTTGGATTGGCAATGCAGGCTGAGCTGGTTGTTCTTGCAAGTACGGTaGGGCGGTGGGAGTGACATT +
Preference number: 4 (lower is better)
Translates to: THDPCTFWLDWQCRLSWLFLQVR*GGGSDI
Trigger: AATGTCACTCCCACCGCCCCACCGTACTTGCAAGAA...CAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR TCA 90 bp AAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTATCCGGAGTGGGATGCTaGCAGCAGAGGCGAGCGTTC +
Preference number: 4 (lower is better)
Translates to: KKHRLLEIALQNLGCQQLSGVGC*QQRRAF
Trigger: GAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGA...TAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAAGGCCGAGCCGGGGTTaGGGCCTCGGCGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKRPSRG*GLGGVV
Trigger: CACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCT...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR GCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTCTGGGGCTGCTTTCTTaGAAGTACGGTGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITLGLLS*KYGGAV
Trigger: CACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAG...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp GATTGGCAATGCAGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCGTGACATTTCCGGAGTaGGATGCTGACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DWQCRLSWLFFRNKHYWAVTFPE*DADSRG
Trigger: GCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCAC...GGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp AAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAGGCTGTATATGGAGGTaGGAGCTCCGCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KKHRLLEIALQNLGCQQLGCIWR*ELRSGA
Trigger: AGCCCCAGAGCGGAGCTCCCACCTCCATATACAGCC...TAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR TCA 90 bp CGCCGAGATGTGTCCTTACAAATGAGAAGACAATTACAAGGGCATCTAACATATTCCGGAGTGGGATGCTaGCAGCAGAGGCGAGCGTTC +
Preference number: 4 (lower is better)
Translates to: RRDVSLQMRRQLQGHLTYSGVGC*QQRRAF
Trigger: GAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGA...ATATGTTAGATGCCCTTGTAATTGTCTTCTCATTTGTAAGGACACATCTCGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGATGCTGCTGCCTCTGCTaGCGCTGCTGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGCCCLC*RCCRCS
Trigger: GCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCA...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR GCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTGCTCCGCTCTGGGGCTaGTTTCTTGCAAGTACGGTG +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITAPLWG*FLASTV
Trigger: CACCGTACTTGCAAGAAAGCAGCCCCAGAGCGGAGC...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGCGGCCTCGGCGGAGTaGTGGCTACTGCTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGAASAE*WLLLLP
Trigger: AGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCGC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR CCA 90 bp CGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACCCAACTCCAATGAAAGGCAATGGCTGTATATaGAGGTGGGAGCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: RNRLAKSGVPTVNPTPMKGNGCI*RWELRS
Trigger: AGAGCGGAGCTCCCACCTCCATATACAGCCATTGCC...TTTCATTGGAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp ACAGTTGGGTCTTGGGCATCCTATTCGCCGAGATGTGTCCTTACAAATGAGAAGCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: TVGSWASYSPRCVLTNEKHWRLD*QWLYME
Trigger: CTCCATATACAGCCATTGCCAGTCCAGACGCCAGTG...CTTCTCATTTGTAAGGACACATCTCGGCGAATAGGATGCCCAAGACCCAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp CAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCACCTTCTGGTTGGATTaGCAATGCAGGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLPKKHRLLEIALQNLGCTFWLD*QCRLSW
Trigger: CCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGT...GCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR TCA 90 bp CGTCTGGACTGGCAATGGCTGTATATGGAGGTGGGAGCTCCGCTCAAGGAAACAATGTGTCCTTACAAATaGGAAGACAATTACAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLDWQWLYMEVGAPLKETMCPYK*EDNYKG
Trigger: GCCCTTGTAATTGTCTTCTCATTTGTAAGGACACAT...TGTTTCCTTGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAATCAGCAGCCATGACTaGGGCAGCGGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKISSHD*GSGGAW
Trigger: CCAGGCCCCGCCGCTGCCGCAGTCATGGCTGCTGAT...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGCCTCGGCGGAGTGGTaGCTACTGCTGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGASAEW*LLLLPL
Trigger: CAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR CCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTGTGACATTTCCGGAGTaGGATGCTGACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITVTFPE*DADSRG
Trigger: GCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCAC...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp ATTAGTGATTGGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ISDWHTRQFITGIPLASGRLDWQ*LYMEVG
Trigger: TCCCACCTCCATATACAGCCATTGCCAGTCCAGACG...TCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCCAATCACTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR TCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGTGGGGCGGTGGGAGTaGCATTTCCGGAGTGGGATG +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGVGRWE*HFRSGM
Trigger: CATCCCACTCCGGAAATGTCACTCCCACCGCCCCAC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR TCA 90 bp ACAGTTGGGTCTTGGGCATCCTATTCGCCGAGATGTGTCCTTACAAATGAGAAGATTGGCAATGCAGGCTaGGCTGGTTGTTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: TVGSWASYSPRCVLTNEKIGNAG*AGCSSE
Trigger: TTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAAT...CTTCTCATTTGTAAGGACACATCTCGGCGAATAGGATGCCCAAGACCCAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR TCA 90 bp TATTACTGGAATACCACTGGCGTCTGGACTGGCAATGGCTGTATATGGAGGTGGATTTTGCCAGAGTGTTaGACCTCAGTTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: YYWNTTGVWTGNGCIWRWILPEC*TSVPST
Trigger: TGTGGATGGAACTGAGGTTCAACACTCTGGCAAAAT...CCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp ATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCACTACCCTGGTTGGATTGGCAATaGAGGCTGAGCTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: IIPMVIYAQQRLRGSALPWLDWQ*RLSWLF
Trigger: GAACAACCAGCTCAGCCTGCATTGCCAATCCAACCA...GGGTAGTGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp CGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACCCAACTCCAATGAAAGCAGTGTGGGCATTTTaGCAGAGTGTTGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: RNRLAKSGVPTVNPTPMKAVWAF*QSVEPQ
Trigger: CTGAGGTTCAACACTCTGGCAAAATGCCCACACTGC...TTTCATTGGAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS-3UTR GCA 90 bp TTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCTCGGATAAGGCAGATCATCCACTCTGGGGCTaGTTTCTTGCAAGTACGGTG +
Preference number: 4 (lower is better)
Translates to: FWITDSYGSPITSSDKADHPLWG*FLASTV
Trigger: CACCGTACTTGCAAGAAAGCAGCCCCAGAGTGGATG...ATCTGCCTTATCCGAGCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS-3UTR CCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTTTCTTGCAAGTACGGTaGGGCGGTGGGAGTGACATT +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITFLQVR*GGGSDI
Trigger: AATGTCACTCCCACCGCCCCACCGTACTTGCAAGAA...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYHWRLD*QWLYME
Trigger: CTCCATATACAGCCATTGCCAGTCCAGACGCCAGTG...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CCA 90 bp CAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCAATACCACTGGCGTCTaGACTGGCAATGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: QLPKKHRLLEIALQNLGCNTTGV*TGNGCI
Trigger: TATACAGCCATTGCCAGTCCAGACGCCAGTGGTATT...GCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp ATTGCAAACTGTGCACTTAACCACATGCTGGTGAAGCTTGCCATCCAAATTGATGGCAATGGCTGTATATaGAGGTGGGAGCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: IANCALNHMLVKLAIQIDGNGCI*RWELRS
Trigger: TGAGCGGAGCTCCCACCTCCATATACAGCCATTGCC...ATCAATTTGGATGGCAAGCTTCACCAGCATGTGGTTAAGTGCACAGTTTGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR TCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAATCCGGAGTGGGATGCTaGCAGCAGAGGCGAGCGTTC +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKSGVGC*QQRRAF
Trigger: GAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGA...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp GTGCCAACAGTTAACCCAACTCCAATGAAAATACATATCATTCCAATGGTAATATCCGGAGTGGGATGCTaGCAGCAGAGGCGAGCGTTC +
Preference number: 4 (lower is better)
Translates to: VPTVNPTPMKIHIIPMVISGVGC*QQRRAF
Trigger: GAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGA...TATTACCATTGGAATGATATGTATTTTCATTGGAGTTGGGTTAACTGTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518359.5
ENST00000518869.1
ENST00000520709.5
CDS-3UTR TCA 90 bp ACAGTTGGGTCTTGGGCATCCTATTCGCCGAGATGTGTCCTTACAAATGAGAAGTTAACCACATGCTGGTaGAGCTTGCCATCCAAATTG +
Preference number: 4 (lower is better)
Translates to: TVGSWASYSPRCVLTNEKLTTCW*SLPSKL
Trigger: CAATTTGGATGGCAAGCTTCACCAGCATGTGGTTAA...CTTCTCATTTGTAAGGACACATCTCGGCGAATAGGATGCCCAAGACCCAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR GCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAAGTGGTGGCTACTGCTaGTGCCTCTGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKSGGYC*CLCCRC
Trigger: GCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACT...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR GCA 90 bp TTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCTCGGATAAGGCAGATTGGTTGGATTGGCAATaGAGGCTGAGCTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FWITDSYGSPITSSDKADWLDWQ*RLSWLF
Trigger: GAACAACCAGCTCAGCCTGCATTGCCAATCCAACCA...ATCTGCCTTATCCGAGCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR GCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTGCAGTGTGGGCATTTTaGCAGAGTGTTGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITAVWAF*QSVEPQ
Trigger: CTGAGGTTCAACACTCTGGCAAAATGCCCACACTGC...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR GCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTGCTCGAAATCGCCTTaGAAAATCTGGGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYCSKSP*KIWGAN
Trigger: GTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCA...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTTCTACAGTTGGGTCTTaGGCATCCTATTCGCCGAGA +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITSTVGS*ASYSPR
Trigger: TCTCGGCGAATAGGATGCCCAAGACCCAACTGTAGA...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CCA 90 bp GATTGGCAATGCAGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCTTATCCGTCTACAGTTaGGTCTTGGGCATCCTATTC +
Preference number: 4 (lower is better)
Translates to: DWQCRLSWLFFRNKHYWALSVYS*VLGILF
Trigger: GAATAGGATGCCCAAGACCCAACTGTAGACGGATAA...GGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACGACCCTTGTACCTTCTaGTTGGATTGGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYDPCTF*LDWQCR
Trigger: CCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTC...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CCA 90 bp ATAAGCATTACTGGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCTTGGGCATGACCCTTGTACCTTCTaGTTGGATTGGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: ISITGPRLIIRLQLGLGHDPCTF*LDWQCR
Trigger: CCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTC...ATGCCCAAGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp ACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCACTGGCTGTATATGGAGGTaGGAGCTCCGCTCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TYHSNGNICTAASSWKCTGCIWR*ELRSRK
Trigger: TTTCCTTGAGCGGAGCTCCCACCTCCATATACAGCC...AGTGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
3UTR CAA 72 bp CAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTaGCAAAATCTGGGGTGCCAACAGTTAACCCAACTC +
Preference number: 4 (lower is better)
Translates to: QLPKKHRLLEIA*QNLGCQQLTQL
Trigger: GAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp GTGCCAACAGTTAACCCAACTCCAATGAAAATACATATCATTCCAATGGTAATACTGGGGCTGCTTTCTTaGAAGTACGGTGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VPTVNPTPMKIHIIPMVILGLLS*KYGGAV
Trigger: CACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAG...TATTACCATTGGAATGATATGTATTTTCATTGGAGTTGGGTTAACTGTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000518359.5
ENST00000518869.1
ENST00000520709.5
CDS-3UTR GCA 90 bp ACACTCTCACCTGCATTACTGAATCATAAACAAGCTTATGCAAAACTGTGTTCTGCTCCGCTCTGGGGCTaGTTTCTTGCAAGTACGGTG +
Preference number: 4 (lower is better)
Translates to: TLSPALLNHKQAYAKLCSAPLWG*FLASTV
Trigger: CACCGTACTTGCAAGAAAGCAGCCCCAGAGCGGAGC...AGAACACAGTTTTGCATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAGGCTGTATATGGAGGTaGGAGCTCCGCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKGCIWR*ELRSGA
Trigger: AGCCCCAGAGCGGAGCTCCCACCTCCATATACAGCC...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp TTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: LCKTVFWITDSYGSPITSHWRLD*QWLYME
Trigger: CTCCATATACAGCCATTGCCAGTCCAGACGCCAGTG...GCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTACGGCAGTTTATTACTaGAATACCACTGGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITTAVYY*NTTGVW
Trigger: CCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGT...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CCA 90 bp AGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCAAGGTTAATTATACCTTCTGGTTGGATTaGCAATGCAGGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLSWLFFRNKHYWAKVNYTFWLD*QCRLSW
Trigger: CCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGT...ATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp ATTAGTGATTGGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACAGTTAGTAAACCTCTaGGGCTGCTTTCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ISDWHTRQFITGIPLASGQLVNL*GCFLAS
Trigger: ACTTGCAAGAAAGCAGCCCCAGAGGTTTACTAACTG...TCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCCAATCACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp GAGATAAGCAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCCAGTTCCATCCACTCTaGGGCTGCTTTCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: EISNCPRNIGCSKSPCKIQFHPL*GCFLAS
Trigger: ACTTGCAAGAAAGCAGCCCCAGAGTGGATGGAACTG...GATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTGCTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520709.5
3UTR CAA 72 bp ATCCTAGGAGATAAGCAATTGCCCAAGAAACATAGGTaGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ILGDKQLPKKHR*LEIALQNLGCQ
Trigger: TTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTGCTTATCTCCTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR TCA 90 bp GAGATAAGCAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCATTGGCAATGCAGGCTaGGCTGGTTGTTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: EISNCPRNIGCSKSPCKIIGNAG*AGCSSE
Trigger: TTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAAT...GATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTGCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR TCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTATTTTGCCAGAGTGTTaGACCTCAGTTCCATCCACA +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITILPEC*TSVPST
Trigger: TGTGGATGGAACTGAGGTTCAACACTCTGGCAAAAT...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTGTGTTCTGGATAACTaGCTCTTATGGCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYCVLDN*LLWLPN
Trigger: ATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACA...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR TCA 90 bp AAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTATGTGTTCTGGATAACTaGCTCTTATGGCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: KKHRLLEIALQNLGCQQLCVLDN*LLWLPN
Trigger: ATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACA...TAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR TCA 90 bp AGCTTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAAGTGCACTACCCACTaGGGAGCAGGAATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLCKTVFWITDSYGSPITKCTTH*GAGMCF
Trigger: GAAACACATTCCTGCTCCTCAGTGGGTAGTGCACTT...TGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR TCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACATTTTGCCAGAGTGTTaGACCTCAGTTCCATCCACT +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYILPEC*TSVPST
Trigger: AGTGGATGGAACTGAGGTTCAACACTCTGGCAAAAT...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS-3UTR GCA 90 bp ATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCAGCAGTGTGGGCATTTTaGCAGAGTGTTGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: IHIIPMVIYAQQRLRGSAAVWAF*QSVEPQ
Trigger: CTGAGGTTCAACACTCTGGCAAAATGCCCACACTGC...TGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518869.1
ENST00000520709.5
CDS-3UTR GCA 90 bp ATAAGCATTACTGGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCTTGGGCATTCCAATGGTAATATATaGACAGCAGCGTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: ISITGPRLIIRLQLGLGHSNGNI*TAASSW
Trigger: CCACGAAGACGCTGCTGTGCATATATTACCATTGGA...ATGCCCAAGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGTGACATTTCCGGAGTaGGATGCTGACAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGVTFPE*DADSRG
Trigger: GCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCAC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAGTGGGAGCTCCGCTCTaGGGCTGCTTTCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKVGAPL*GCFLAS
Trigger: ACTTGCAAGAAAGCAGCCCCAGAGCGGAGCTCCCAC...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp GTGCCAACAGTTAACCCAACTCCAATGAAAATACATATCATTCCAATGGTAATAGTGGGAGCTCCGCTCTaGGGCTGCTTTCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: VPTVNPTPMKIHIIPMVIVGAPL*GCFLAS
Trigger: ACTTGCAAGAAAGCAGCCCCAGAGCGGAGCTCCCAC...TATTACCATTGGAATGATATGTATTTTCATTGGAGTTGGGTTAACTGTTGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGGCAATGGCTGTATATaGAGGTGGGAGCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGGNGCI*RWELRS
Trigger: AGAGCGGAGCTCCCACCTCCATATACAGCCATTGCC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp ATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCATTACTGGAATACCACTaGCGTCTGGACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: IHIIPMVIYAQQRLRGSALLEYH*RLDWQW
Trigger: CCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAA...TGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR CCA 90 bp GAGATAAGCAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCACGGCAGTTTATTACTaGAATACCACTGGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: EISNCPRNIGCSKSPCKITAVYY*NTTGVW
Trigger: CCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGT...GATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTGCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp TTCATTGCAAACTGTGCACTTAACCACATGCTGGTGAAGCTTGCCATCCAAATTACGGCAGTTTATTACTaGAATACCACTGGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: FIANCALNHMLVKLAIQITAVYY*NTTGVW
Trigger: CCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGT...AATTTGGATGGCAAGCTTCACCAGCATGTGGTTAAGTGCACAGTTTGCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp ATTAGTGATTGGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGAATATTTCTTGCCTGTTaGGGGGTTTTTGATTGGCGT +
Preference number: 4 (lower is better)
Translates to: ISDWHTRQFITGIPLASGIFLAC*GVFDWR
Trigger: ACGCCAATCAAAAACCCCCCAACAGGCAAGAAATAT...TCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCCAATCACTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp TTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCTCGGATAAGGCAGATTTATCCGTCTACAGTTaGGTCTTGGGCATCCTATTC +
Preference number: 4 (lower is better)
Translates to: FWITDSYGSPITSSDKADLSVYS*VLGILF
Trigger: GAATAGGATGCCCAAGACCCAACTGTAGACGGATAA...ATCTGCCTTATCCGAGCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp ATTAGTGATTGGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACAATGCAGGCTGAGCTaGTTGTTCTTCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: ISDWHTRQFITGIPLASGQCRLS*LFFRNK
Trigger: CTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTG...TCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCCAATCACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR TCA 90 bp GAGATAAGCAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCGCTTGCCATCCAAATTaGTTAGTGATTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: EISNCPRNIGCSKSPCKIACHPN*LVIGTH
Trigger: GTGTGTGCCAATCACTAATCAATTTGGATGGCAAGC...GATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTGCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR GCA 90 bp TTGCCATCCAAATTGATTAGTGATTGGCACACACGGCAGTTTATTACTGGAATAGTAAACCTCTGGGGCTaGTTTCTTGCAAGTACGGTG +
Preference number: 4 (lower is better)
Translates to: LPSKLISDWHTRQFITGIVNLWG*FLASTV
Trigger: CACCGTACTTGCAAGAAAGCAGCCCCAGAGGTTTAC...TATTCCAGTAATAAACTGCCGTGTGTGCCAATCACTAATCAATTTGGATGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp CCAACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTTTCTTGCAAGTACGGTaGGGCGGTGGGAGTGACATT +
Preference number: 4 (lower is better)
Translates to: PTPMKIHIIPMVIYAQQRFLQVR*GGGSDI
Trigger: AATGTCACTCCCACCGCCCCACCGTACTTGCAAGAA...ACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518359.5
ENST00000518869.1
ENST00000520709.5
CDS-3UTR CCA 90 bp TCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGCGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SNENTYHSNGNICTAASSRLDWQ*LYMEVG
Trigger: TCCCACCTCCATATACAGCCATTGCCAGTCCAGACG...CGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR CCA 90 bp GATTGGCAATGCAGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCAGAAATAAGCATTACTaGGCCAAGGTTAATTATCCG +
Preference number: 4 (lower is better)
Translates to: DWQCRLSWLFFRNKHYWARNKHY*AKVNYP
Trigger: CGGATAATTAACCTTGGCCCAGTAATGCTTATTTCT...GGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTCAATGCAGGCTGAGCTaGTTGTTCTTCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITQCRLS*LFFRNK
Trigger: CTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTG...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CCA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACCAATGCAGGCTGAGCTaGTTGTTCTTCAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYQCRLS*LFFRNK
Trigger: CTTATTTCTGAAGAACAACCAGCTCAGCCTGCATTG...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR TCA 90 bp AATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCTTAACCACATGCTGGTaGAGCTTGCCATCCAAATTG +
Preference number: 4 (lower is better)
Translates to: NTYHSNGNICTAASSWKCLTTCW*SLPSKL
Trigger: CAATTTGGATGGCAAGCTTCACCAGCATGTGGTTAA...GCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR TCA 90 bp CGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACCCAACTCCAATGAAATCTCACCTGCATTACTaGATCATAAACAAGCTTATG +
Preference number: 4 (lower is better)
Translates to: RNRLAKSGVPTVNPTPMKSHLHY*IINKLM
Trigger: CATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGA...TTTCATTGGAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGATGGTTGGATTGGCAATaGAGGCTGAGCTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGWLDWQ*RLSWLF
Trigger: GAACAACCAGCTCAGCCTGCATTGCCAATCCAACCA...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR GCA 90 bp TCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGCTCGAAATCGCCTTaGAAAATCTGGGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SNENTYHSNGNICTAASSCSKSP*KIWGAN
Trigger: GTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCA...CGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAACGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKRLDWQ*LYMEVG
Trigger: TCCCACCTCCATATACAGCCATTGCCAGTCCAGACG...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp CAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCAAATTGATTAGTGATTaGCACACACGGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: QLPKKHRLLEIALQNLGCKLISD*HTRQFI
Trigger: AATAAACTGCCGTGTGTGCCAATCACTAATCAATTT...GCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp ACACTCTCACCTGCATTACTGAATCATAAACAAGCTTATGCAAAACTGTGTTCTTCTACAGTTGGGTCTTaGGCATCCTATTCGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TLSPALLNHKQAYAKLCSSTVGS*ASYSPR
Trigger: TCTCGGCGAATAGGATGCCCAAGACCCAACTGTAGA...AGAACACAGTTTTGCATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAACCTTCTGGTTGGATTaGCAATGCAGGCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKTFWLD*QCRLSW
Trigger: CCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGT...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTTGCAAAACTGTGTTCTaGATAACTGACTCTTATGGC +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITCKTVF*ITDSYG
Trigger: GCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCA...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp TTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCTCGGATAAGGCAGATTGCAAAACTGTGTTCTaGATAACTGACTCTTATGGC +
Preference number: 4 (lower is better)
Translates to: FWITDSYGSPITSSDKADCKTVF*ITDSYG
Trigger: GCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCA...ATCTGCCTTATCCGAGCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR TCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAATTGGCAATGCAGGCTaGGCTGGTTGTTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGIGNAG*AGCSSE
Trigger: TTCTGAAGAACAACCAGCTCAGCCTGCATTGCCAAT...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTTCTCACCTGCATTACTaGATCATAAACAAGCTTATG +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITSHLHY*IINKLM
Trigger: CATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGA...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR GCA 90 bp AGCTTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACACCAAGAAACATAGGTTaGTCGAAATCGCCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SLCKTVFWITDSYGSPITPRNIG*SKSPCK
Trigger: TTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGG...TGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAATTACTGGAATACCACTaGCGTCTGGACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKLLEYH*RLDWQW
Trigger: CCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAA...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp AACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTTACTGGAATACCACTaGCGTCTGGACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: NSNENTYHSNGNICTAASLLEYH*RLDWQW
Trigger: CCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAA...AGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR CCA 90 bp AACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCTACAGTTGGGTCTTaGGCATCCTATTCGCCGAGA +
Preference number: 4 (lower is better)
Translates to: NSNENTYHSNGNICTAASSTVGS*ASYSPR
Trigger: TCTCGGCGAATAGGATGCCCAAGACCCAACTGTAGA...AGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR CCA 90 bp AAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAAGAAATAAGCATTACTaGGCCAAGGTTAATTATCCG +
Preference number: 4 (lower is better)
Translates to: KKHRLLEIALQNLGCQQLRNKHY*AKVNYP
Trigger: CGGATAATTAACCTTGGCCCAGTAATGCTTATTTCT...TAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAGACCCTTGTACCTTCTaGTTGGATTGGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKDPCTF*LDWQCR
Trigger: CCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTC...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGCTTGCCATCCAAATTaGTTAGTGATTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGACHPN*LVIGTH
Trigger: GTGTGTGCCAATCACTAATCAATTTGGATGGCAAGC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp CCAACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTGCTTGCCATCCAAATTaGTTAGTGATTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: PTPMKIHIIPMVIYAQQRACHPN*LVIGTH
Trigger: GTGTGTGCCAATCACTAATCAATTTGGATGGCAAGC...ACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR TCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGATTAACCACATGCTGGTaGAGCTTGCCATCCAAATTG +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGLTTCW*SLPSKL
Trigger: CAATTTGGATGGCAAGCTTCACCAGCATGTGGTTAA...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp TCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGTGTTCTGGATAACTaGCTCTTATGGCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: SNENTYHSNGNICTAASSCVLDN*LLWLPN
Trigger: ATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACA...CGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAAATACCACTGGCGTCTaGACTGGCAATGGCTGTATA +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKNTTGV*TGNGCI
Trigger: TATACAGCCATTGCCAGTCCAGACGCCAGTGGTATT...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTAAATTGATTAGTGATTaGCACACACGGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: KMSRVAYQELLDTLTCITKLISD*HTRQFI
Trigger: AATAAACTGCCGTGTGTGCCAATCACTAATCAATTT...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGATTATCCGTCTACAGTTaGGTCTTGGGCATCCTATTC +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGLSVYS*VLGILF
Trigger: GAATAGGATGCCCAAGACCCAACTGTAGACGGATAA...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR GCA 90 bp GTGCCAACAGTTAACCCAACTCCAATGAAAATACATATCATTCCAATGGTAATATCCAATGGTAATATATaGACAGCAGCGTCTTCGTGG +
Preference number: 4 (lower is better)
Translates to: VPTVNPTPMKIHIIPMVISNGNI*TAASSW
Trigger: CCACGAAGACGCTGCTGTGCATATATTACCATTGGA...TATTACCATTGGAATGATATGTATTTTCATTGGAGTTGGGTTAACTGTTGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518359.5
ENST00000518869.1
ENST00000520709.5
CDS-3UTR CCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAATATTTCTTGCCTGTTaGGGGGTTTTTGATTGGCGT +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGIFLAC*GVFDWR
Trigger: ACGCCAATCAAAAACCCCCCAACAGGCAAGAAATAT...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp ACACTCTCACCTGCATTACTGAATCATAAACAAGCTTATGCAAAACTGTGTTCTATATTTCTTGCCTGTTaGGGGGTTTTTGATTGGCGT +
Preference number: 4 (lower is better)
Translates to: TLSPALLNHKQAYAKLCSIFLAC*GVFDWR
Trigger: ACGCCAATCAAAAACCCCCCAACAGGCAAGAAATAT...AGAACACAGTTTTGCATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAATCAAAACTGCAAAGATaGGCAGTGCGAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKSKLQR*AVRELI
Trigger: AATCAGCTCTCGCACTGCCCATCTTTGCAGTTTTGA...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAATGTGTCCTTACAAATaGGAAGACAATTACAAGGGC +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGMCPYK*EDNYKG
Trigger: GCCCTTGTAATTGTCTTCTCATTTGTAAGGACACAT...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR GCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAACCAAGAAACATAGGTTaGTCGAAATCGCCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKPRNIG*SKSPCK
Trigger: TTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGG...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR TCA 90 bp AACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTATGTGTCCTTACAAATaGGAAGACAATTACAAGGGC +
Preference number: 4 (lower is better)
Translates to: NSNENTYHSNGNICTAASMCPYK*EDNYKG
Trigger: GCCCTTGTAATTGTCTTCTCATTTGTAAGGACACAT...AGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR TCA 90 bp CCAACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTTCTCACCTGCATTACTaGATCATAAACAAGCTTATG +
Preference number: 4 (lower is better)
Translates to: PTPMKIHIIPMVIYAQQRSHLHY*IINKLM
Trigger: CATAAGCTTGTTTATGATTCAGTAATGCAGGTGAGA...ACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR TCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGAGCTTTCCAATCAATaGGGGAAAGAATGGATTATT +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGELSNQ*GKEWII
Trigger: AATAATCCATTCTTTCCCTCATTGATTGGAAAGCTC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp AACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTGCAAAACTGTGTTCTaGATAACTGACTCTTATGGC +
Preference number: 4 (lower is better)
Translates to: NSNENTYHSNGNICTAASCKTVF*ITDSYG
Trigger: GCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCA...AGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CCA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAAGAAATAAGCATTACTaGGCCAAGGTTAATTATCCG +
Preference number: 4 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKRNKHY*AKVNYP
Trigger: CGGATAATTAACCTTGGCCCAGTAATGCTTATTTCT...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGACAACATCTCCAACTGTaGACAAATAAATATTCGTTC +
Preference number: 4 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGQHLQL*TNKYSF
Trigger: GAACGAATATTTATTTGTCCACAGTTGGAGATGTTG...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CCA 90 bp GTGCCAACAGTTAACCCAACTCCAATGAAAATACATATCATTCCAATGGTAATAAAATTGATTAGTGATTaGCACACACGGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: VPTVNPTPMKIHIIPMVIKLISD*HTRQFI
Trigger: AATAAACTGCCGTGTGTGCCAATCACTAATCAATTT...TATTACCATTGGAATGATATGTATTTTCATTGGAGTTGGGTTAACTGTTGGCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS GCA 90 bp GCCGAGCCGGGGTTGCGGCCTCGGCGGAGTGGTGGCTACTGCTGCTaGCTCTGCTGCCGCTGCTGCCGCTGCAGCTGCTGCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: AEPGLRPRRSGGYCC*LCCRCCRCSCCCCR
Trigger: GCGGCAGCAGCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCGCAACCCCGGCTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS GCA 90 bp GGGGAGGCCGAGCCGGGGTTGCGGCCTCGGCGGAGTGGTGGCTACTaGTGCTGCCTCTGCTGCCGCTGCTGCCGCTGCAGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GEAEPGLRPRRSGGY*CCLCCRCCRCSCCC
Trigger: GCAGCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS GCA 90 bp GAGGCCGAGCCGGGGTTGCGGCCTCGGCGGAGTGGTGGCTACTGCTaGTGCCTCTGCTGCCGCTGCTGCCGCTGCAGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EAEPGLRPRRSGGYC*CLCCRCCRCSCCCC
Trigger: GCAGCAGCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS TCA 90 bp CAAGTACGGTGGGGCGGTGGGAGTGACATTTCCGGAGTGGGATGCTaGCAGCAGAGGCGAGCGTTCGTCCACCCCATCAGCAGCCATGAC +
Preference number: 5 (lower is better)
Translates to: QVRWGGGSDISGVGC*QQRRAFVHPISSHD
Trigger: GTCATGGCTGCTGATGGGGTGGACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000518869.1
ENST00000520014.1
ENST00000520709.5
CDS TCA 90 bp CCGCTCTGGGGCTGCTTTCTTGCAAGTACGGTGGGGCGGTGGGAGTaGCATTTCCGGAGTGGGATGCTGACAGCAGAGGCGAGCGTTCGT +
Preference number: 5 (lower is better)
Translates to: PLWGCFLASTVGRWE*HFRSGMLTAEASVR
Trigger: ACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CAA 90 bp ACACGACCCTTGTACCTTCTGGTTGGATTGGCAATGCAGGCTGAGCTGGTTGTTGAGGCCGAGCCGGGGTaGCGGCCTCGGCGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: TRPLYLLVGLAMQAELVVEAEPG*RPRRSG
Trigger: ACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCTC...AACAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS TCA 90 bp CCACTCTGGGGCTGCTTTCTTGCAAGTACGGTGGGGCGGTGGGAGTaGCATTTCCGGAGTGGGATGCTGACAGCAGAGGCGAGCGTTCGT +
Preference number: 5 (lower is better)
Translates to: PLWGCFLASTVGRWE*HFRSGMLTAEASVR
Trigger: ACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS TCA 90 bp AACCTCTGGGGCTGCTTTCTTGCAAGTACGGTGGGGCGGTGGGAGTaGCATTTCCGGAGTGGGATGCTGACAGCAGAGGCGAGCGTTCGT +
Preference number: 5 (lower is better)
Translates to: NLWGCFLASTVGRWE*HFRSGMLTAEASVR
Trigger: ACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518869.1
ENST00000630164.1
CDS TCA 90 bp TCACTCTGGGGCTGCTTTCTTGCAAGTACGGTGGGGCGGTGGGAGTaGCATTTCCGGAGTGGGATGCTGACAGCAGAGGCGAGCGTTCGT +
Preference number: 5 (lower is better)
Translates to: SLWGCFLASTVGRWE*HFRSGMLTAEASVR
Trigger: ACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520014.1
CDS CCA 90 bp CTTTCTTGCAAGTACGGTGGGGCGGTGGGAGTGACATTTCCGGAGTaGGATGCTGACAGCAGAGGCGAGCGTTCGTCCACCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LSCKYGGAVGVTFPE*DADSRGERSSTPSA
Trigger: TGCTGATGGGGTGGACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000518869.1
ENST00000520014.1
ENST00000520709.5
ENST00000630164.1
CDS CCA 90 bp GGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAGGTGGGAGCTCCGCTCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GTHGSLLLEYHWRLD*QWLYMEVGAPLWGC
Trigger: GCAGCCCCAGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CAA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACGAGGCCGAGCCGGGGTaGCGGCCTCGGCGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYEAEPG*RPRRSG
Trigger: ACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCTC...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CAA 90 bp AGCTTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAGAGGCCGAGCCGGGGTaGCGGCCTCGGCGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: SLCKTVFWITDSYGSPITEAEPG*RPRRSG
Trigger: ACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCTC...TGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS CCA 90 bp CACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGAGCTCCGCTCTGGGGCTGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: HGSLLLEYHWRLDWQ*LYMEVGAPLWGCFL
Trigger: AAGAAAGCAGCCCCAGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CAA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAGAGGCCGAGCCGGGGTaGCGGCCTCGGCGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGEAEPG*RPRRSG
Trigger: ACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCTC...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS CCA 90 bp GGCACACACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAGGTGGGAGCTCCGCTGAAAAGATAT +
Preference number: 5 (lower is better)
Translates to: GTHGSLLLEYHWRLD*QWLYMEVGAPLKRY
Trigger: ATATCTTTTCAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520014.1
CDS-3UTR CAA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTCTGGGGCTGCTTTCTaGCAAGTACGGTGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYSGAAF*QVRWGG
Trigger: ACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGA...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000520709.5
CDS CCA 90 bp CACGGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGAGCTCCGCTCAAGGAAACATTTACT +
Preference number: 5 (lower is better)
Translates to: HGSLLLEYHWRLDWQ*LYMEVGAPLKETFT
Trigger: AGTAAATGTTTCCTTGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp ACACACGACCCTTGTACCTTCTGGTTGGATTGGCAATGCAGGCTGAGCTGGTTGATTATCCGTCTACAGTaGGGTCTTGGGCATCCTATT +
Preference number: 5 (lower is better)
Translates to: THDPCTFWLDWQCRLSWLIIRLQ*GLGHPI
Trigger: AATAGGATGCCCAAGACCCAACTGTAGACGGATAAT...CAACCAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGGGTCGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp CAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCCTTGTACCTTCTGGTaGGATTGGCAATGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QLPKKHRLLEIALQNLGCPCTFW*DWQCRL
Trigger: CAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGG...GCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CAA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTGTCTACAGTTGGGTCTaGGGCATCCTATTCGCCGAG +
Preference number: 5 (lower is better)
Translates to: KMSRVAYQELLDTLTCITVYSWV*GILFAE
Trigger: CTCGGCGAATAGGATGCCCAAGACCCAACTGTAGAC...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CAA 90 bp ACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCACTGTCTACAGTTGGGTCTaGGGCATCCTATTCGCCGAG +
Preference number: 5 (lower is better)
Translates to: TYHSNGNICTAASSWKCTVYSWV*GILFAE
Trigger: CTCGGCGAATAGGATGCCCAAGACCCAACTGTAGAC...AGTGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp AATAAGCATTACTGGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCTTGGGCATACCTTCTGGTTGGATaGGCAATGCAGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: NKHYWAKVNYPSTVGSWAYLLVG*AMQAEL
Trigger: CAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTA...TGCCCAAGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp CAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCCCAAGAAACATAGGTaGCTCGAAATCGCCTTGCAA +
Preference number: 5 (lower is better)
Translates to: QLPKKHRLLEIALQNLGCPKKHR*LEIALQ
Trigger: TTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGG...GCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CAA 90 bp AGCTTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAGTCTACAGTTGGGTCTaGGGCATCCTATTCGCCGAG +
Preference number: 5 (lower is better)
Translates to: SLCKTVFWITDSYGSPITVYSWV*GILFAE
Trigger: CTCGGCGAATAGGATGCCCAAGACCCAACTGTAGAC...TGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CAA 90 bp CTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCAAGGTTAATTATCCGCCTTGTACCTTCTGGTaGGATTGGCAATGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSWLFFRNKHYWAKVNYPPCTFW*DWQCRL
Trigger: CAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGG...CGGATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp TTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCTACCTTCTGGTTGGATaGGCAATGCAGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: LCKTVFWITDSYGSPITSYLLVG*AMQAEL
Trigger: CAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTA...GCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CAA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTCATTTTGCCAGAGTGTaGAACCTCAGTTCCATCCAC +
Preference number: 5 (lower is better)
Translates to: KMSRVAYQELLDTLTCITHFARV*NLSSIH
Trigger: GTGGATGGAACTGAGGTTCAACACTCTGGCAAAATG...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR CAA 90 bp TTCTGGATAACTGACTCTTATGGCTCCCCAATAACAAGCTCGGATAAGGCAGATCATTTTGCCAGAGTGTaGAACCTCAGTTCCATCCAC +
Preference number: 5 (lower is better)
Translates to: FWITDSYGSPITSSDKADHFARV*NLSSIH
Trigger: GTGGATGGAACTGAGGTTCAACACTCTGGCAAAATG...ATCTGCCTTATCCGAGCTTGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS-3UTR CAA 90 bp GAGATAAGCAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTTGCTCGAAATCGCCTaGCAAAATCTGGGGTGCCAA +
Preference number: 5 (lower is better)
Translates to: EISNCPRNIGCSKSPCKILLEIA*QNLGCQ
Trigger: TTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAA...GATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTGCTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CAA 90 bp CAATTGCCCAAGAAACATAGGTTGCTCGAAATCGCCTTGCAAAATCTGGGGTGCCTAGGAGATAAGCAATaGCCCAAGAAACATAGGTTG +
Preference number: 5 (lower is better)
Translates to: QLPKKHRLLEIALQNLGCLGDKQ*PKKHRL
Trigger: CAACCTATGTTTCTTGGGCAATTGCTTATCTCCTAG...GCACCCCAGATTTTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGGCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CAA 90 bp CGAAATCGCCTTGCAAAATCTGGGGTGCCAACAGTTAACCCAACTCCAATGAAAAGCTTGCCATCCAAATaGATTAGTGATTGGCACACA +
Preference number: 5 (lower is better)
Translates to: RNRLAKSGVPTVNPTPMKSLPSK*ISDWHT
Trigger: TGTGTGCCAATCACTAATCAATTTGGATGGCAAGCT...TTTCATTGGAGTTGGGTTAACTGTTGGCACCCCAGATTTTGCAAGGCGATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CAA 90 bp AATAAGCATTACTGGGCCAAGGTTAATTATCCGTCTACAGTTGGGTCTTGGGCAATTGGCGTAGCTTCATaGCAAACTGTGCACTTAACC +
Preference number: 5 (lower is better)
Translates to: NKHYWAKVNYPSTVGSWAIGVAS*QTVHLT
Trigger: GGTTAAGTGCACAGTTTGCAATGAAGCTACGCCAAT...TGCCCAAGACCCAACTGTAGACGGATAATTAACCTTGGCCCAGTAATGCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp AAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTATTATCCGTCTACAGTaGGGTCTTGGGCATCCTATT +
Preference number: 5 (lower is better)
Translates to: KMSRVAYQELLDTLTCITIIRLQ*GLGHPI
Trigger: AATAGGATGCCCAAGACCCAACTGTAGACGGATAAT...AGTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CAA 90 bp AAAGATGTCCAGAGTAGCTTACCAAGAACTGCTAGACACTCTCACCTGCATTACTGCAGGCTGAGCTGGTaGTTCTTCAGAAATAAGCAT +
Preference number: 5 (lower is better)
Translates to: KDVQSSLPRTARHSHLHYCRLSW*FFRNKH
Trigger: ATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCA...GTAATGCAGGTGAGAGTGTCTAGCAGTTCTTGGTAAGCTACTCTGGACATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS-3UTR CAA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGATACCTTCTGGTTGGATaGGCAATGCAGGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGYLLVG*AMQAEL
Trigger: CAGCTCAGCCTGCATTGCCAATCCAACCAGAAGGTA...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CAA 90 bp ATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTTCGTGGAAGTGCAATTGGCGTAGCTTCATaGCAAACTGTGCACTTAACC +
Preference number: 5 (lower is better)
Translates to: IHIIPMVIYAQQRLRGSAIGVAS*QTVHLT
Trigger: GGTTAAGTGCACAGTTTGCAATGAAGCTACGCCAAT...TGCACTTCCACGAAGACGCTGCTGTGCATATATTACCATTGGAATGATATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000518869.1
CDS-3UTR CAA 90 bp AGCTTATGCAAAACTGTGTTCTGGATAACTGACTCTTATGGCTCCCCAATAACAATTATCCGTCTACAGTaGGGTCTTGGGCATCCTATT +
Preference number: 5 (lower is better)
Translates to: SLCKTVFWITDSYGSPITIIRLQ*GLGHPI
Trigger: AATAGGATGCCCAAGACCCAACTGTAGACGGATAAT...TGTTATTGGGGAGCCATAAGAGTCAGTTATCCAGAACACAGTTTTGCATAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518359.5
CDS-3UTR CAA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAACCTTGTACCTTCTGGTaGGATTGGCAATGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKPCTFW*DWQCRL
Trigger: CAGCCTGCATTGCCAATCCAACCAGAAGGTACAAGG...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CAA 90 bp CCAACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTTTGCTCGAAATCGCCTaGCAAAATCTGGGGTGCCAA +
Preference number: 5 (lower is better)
Translates to: PTPMKIHIIPMVIYAQQRLLEIA*QNLGCQ
Trigger: TTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAA...ACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CAA 90 bp AGGCTGAGCTGGTTGTTCTTCAGAAATAAGCATTACTGGGCCAAGGTTAATTATAGCTTGCCATCCAAATaGATTAGTGATTGGCACACA +
Preference number: 5 (lower is better)
Translates to: RLSWLFFRNKHYWAKVNYSLPSK*ISDWHT
Trigger: TGTGTGCCAATCACTAATCAATTTGGATGGCAAGCT...ATAATTAACCTTGGCCCAGTAATGCTTATTTCTGAAGAACAACCAGCTCAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp CCGAGATGTGTCCTTACAAATGAGAAGACAATTACAAGGGCATCTAACATATTTCATTTTGCCAGAGTGTaGAACCTCAGTTCCATCCAC +
Preference number: 5 (lower is better)
Translates to: PRCVLTNEKTITRASNIFHFARV*NLSSIH
Trigger: GTGGATGGAACTGAGGTTCAACACTCTGGCAAAATG...AAATATGTTAGATGCCCTTGTAATTGTCTTCTCATTTGTAAGGACACATCTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAATTGCTCGAAATCGCCTaGCAAAATCTGGGGTGCCAA +
Preference number: 5 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKLLEIA*QNLGCQ
Trigger: TTGGCACCCCAGATTTTGCAAGGCGATTTCGAGCAA...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CAA 90 bp CCGAGATGTGTCCTTACAAATGAGAAGACAATTACAAGGGCATCTAACATATTTTGCAGGCTGAGCTGGTaGTTCTTCAGAAATAAGCAT +
Preference number: 5 (lower is better)
Translates to: PRCVLTNEKTITRASNIFCRLSW*FFRNKH
Trigger: ATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCA...AAATATGTTAGATGCCCTTGTAATTGTCTTCTCATTTGTAAGGACACATCTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS-3UTR CAA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAACCCAAGAAACATAGGTaGCTCGAAATCGCCTTGCAA +
Preference number: 5 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKPKKHR*LEIALQ
Trigger: TTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGG...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CAA 90 bp AACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTCCCAAGAAACATAGGTaGCTCGAAATCGCCTTGCAA +
Preference number: 5 (lower is better)
Translates to: NSNENTYHSNGNICTAASPKKHR*LEIALQ
Trigger: TTGCAAGGCGATTTCGAGCAACCTATGTTTCTTGGG...AGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS-3UTR CAA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGAAGCTTGCCATCCAAATaGATTAGTGATTGGCACACA +
Preference number: 5 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGSLPSK*ISDWHT
Trigger: TGTGTGCCAATCACTAATCAATTTGGATGGCAAGCT...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CAA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAAATTGGCGTAGCTTCATaGCAAACTGTGCACTTAACC +
Preference number: 5 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKIGVAS*QTVHLT
Trigger: GGTTAAGTGCACAGTTTGCAATGAAGCTACGCCAAT...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CAA 90 bp TCAATAAGAAAAATTTACCATGATCTAAGGGAAAGGGGCACAACCCAATGTAAATGCAGGCTGAGCTGGTaGTTCTTCAGAAATAAGCAT +
Preference number: 5 (lower is better)
Translates to: SIRKIYHDLRERGTTQCKCRLSW*FFRNKH
Trigger: ATGCTTATTTCTGAAGAACAACCAGCTCAGCCTGCA...TTTACATTGGGTTGTGCCCCTTTCCCTTAGATCATGGTAAATTTTTCTTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285419.8
CDS-3UTR CAA 90 bp GACTCCCAAAGTCTTGAAACGATTATACATAAACCAGAATGGAATCCATTAGGACTAGGAGATAAGCAATaGCCCAAGAAACATAGGTTG +
Preference number: 5 (lower is better)
Translates to: DSQSLETIIHKPEWNPLGLGDKQ*PKKHRL
Trigger: CAACCTATGTTTCTTGGGCAATTGCTTATCTCCTAG...TCCTAATGGATTCCATTCTGGTTTATGTATAATCGTTTCAAGACTTTGGGAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000520709.5
CDS-3UTR CAA 90 bp AACTCCAATGAAAATACATATCATTCCAATGGTAATATATGCACAGCAGCGTCTCTAGGAGATAAGCAATaGCCCAAGAAACATAGGTTG +
Preference number: 5 (lower is better)
Translates to: NSNENTYHSNGNICTAASLGDKQ*PKKHRL
Trigger: CAACCTATGTTTCTTGGGCAATTGCTTATCTCCTAG...AGACGCTGCTGTGCATATATTACCATTGGAATGATATGTATTTTCATTGGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518359.5
ENST00000520709.5
CDS CCA 72 bp GGAGGCCGAGCCGGGGTTGCGGCCTCGGCGGAGTGGTaGCTACTGCTGCTGCCTCTGCTGCCGCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: GGRAGVAASAEW*LLLLPLLPLLP
Trigger: CGGCAGCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCGCAACCCCGGCTCGGCCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285419.8
ENST00000518869.1
ENST00000520709.5
CDS GCA 72 bp GGGTTGCGGCCTCGGCGGAGTGGTGGCTACTGCTGCTaGCTCTGCTGCCGCTGCTGCCGCTGCAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GLRPRRSGGYCC*LCCRCCRCSCC
Trigger: GCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCGCAACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518869.1
CDS GCA 72 bp CCTCGGCGGAGTGGTGGCTACTGCTGCTGCCTCTGCTaGCGCTGCTGCCGCTGCAGCTGCTGCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: PRRSGGYCCCLC*RCCRCSCCCCR
Trigger: GCGGCAGCAGCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS GCA 72 bp CGGCCTCGGCGGAGTGGTGGCTACTGCTGCTGCCTCTaGTGCCGCTGCTGCCGCTGCAGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RPRRSGGYCCCL*CRCCRCSCCCC
Trigger: GCAGCAGCAGCAGCTGCAGCGGCAGCAGCGGCAGCAGAGGCAGCAGCAGTAGCCACCACTCCGCCGAGGCCG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1
CDS TCA 72 bp TGGGGCGGTGGGAGTGACATTTCCGGAGTGGGATGCTaGCAGCAGAGGCGAGCGTTCGTCCACCCCATCAGC +
Preference number: 6 (lower is better)
Translates to: WGGGSDISGVGC*QQRRAFVHPIS
Trigger: GCTGATGGGGTGGACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000518869.1
ENST00000520014.1
ENST00000520709.5
ENST00000630164.1
CDS CCA 72 bp AAGTACGGTGGGGCGGTGGGAGTGACATTTCCGGAGTaGGATGCTGACAGCAGAGGCGAGCGTTCGTCCACC +
Preference number: 6 (lower is better)
Translates to: KYGGAVGVTFPE*DADSRGERSST
Trigger: GGTGGACGAACGCTCGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000518869.1
ENST00000520014.1
ENST00000520709.5
ENST00000630164.1
CDS CCA 72 bp GAGCTCCGCTCTGGGGCTGCTTTCTTGCAAGTACGGTaGGGCGGTGGGAGTGACATTTCCGGAGTGGGATGC +
Preference number: 6 (lower is better)
Translates to: ELRSGAAFLQVR*GGGSDISGVGC
Trigger: GCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGAGCGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS TCA 72 bp GGCTGCTTTCTTGCAAGTACGGTGGGGCGGTGGGAGTaGCATTTCCGGAGTGGGATGCTGACAGCAGAGGCG +
Preference number: 6 (lower is better)
Translates to: GCFLASTVGRWE*HFRSGMLTAEA
Trigger: CGCCTCTGCTGTCAGCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000285419.8
ENST00000518359.5
ENST00000518869.1
ENST00000520014.1
ENST00000520709.5
ENST00000630164.1
CDS CCA 72 bp TCCATCCACTCTGGGGCTGCTTTCTTGCAAGTACGGTaGGGCGGTGGGAGTGACATTTCCGGAGTGGGATGC +
Preference number: 6 (lower is better)
Translates to: SIHSGAAFLQVR*GGGSDISGVGC
Trigger: GCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGAGTGGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520709.5
CDS CCA 72 bp AATACCACTGGCGTCTGGACTGGCAATGGCTGTATATaGAGGTGGGAGCTCCGCTCTGGGGCTGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: NTTGVWTGNGCI*RWELRSGAAFL
Trigger: CAAGAAAGCAGCCCCAGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS CCA 72 bp ATTAGTCACTCTGGGGCTGCTTTCTTGCAAGTACGGTaGGGCGGTGGGAGTGACATTTCCGGAGTGGGATGC +
Preference number: 6 (lower is better)
Translates to: ISHSGAAFLQVR*GGGSDISGVGC
Trigger: GCATCCCACTCCGGAAATGTCACTCCCACCGCCCCACCGTACTTGCAAGAAAGCAGCCCCAGAGTGACTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520014.1
CDS CCA 72 bp TTATTACTGGAATACCACTGGCGTCTGGACTGGCAATaGCTGTATATGGAGGTGGGAGCTCCGCTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: LLLEYHWRLDWQ*LYMEVGAPLWG
Trigger: GCCCCAGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285419.8
ENST00000518359.5
CDS CCA 72 bp GGCAGTTTATTACTGGAATACCACTGGCGTCTGGACTaGCAATGGCTGTATATGGAGGTGGGAGCTCCGCTG +
Preference number: 6 (lower is better)
Translates to: GSLLLEYHWRLD*QWLYMEVGAPL
Trigger: CAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATTCCAGTAATAAACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520014.1
CDS TCA 72 bp ACTGGCAATGGCTGTATATGGAGGTGGGAGCTCCGCTaGAAAGATATTAGTCACTCTGGGGCTGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: TGNGCIWRWELR*KDISHSGAAFL
Trigger: CAAGAAAGCAGCCCCAGAGTGACTAATATCTTTTCAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520014.1
CDS CCA 72 bp AATACCACTGGCGTCTGGACTGGCAATGGCTGTATATaGAGGTGGGAGCTCCGCTCAAGGAAACATTTACTT +
Preference number: 6 (lower is better)
Translates to: NTTGVWTGNGCI*RWELRSRKHLL
Trigger: AAGTAAATGTTTCCTTGAGCGGAGCTCCCACCTCCATATACAGCCATTGCCAGTCCAGACGCCAGTGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518869.1