RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIP4K2C (Homo sapiens)

Ensembl gene IDs: ENSG00000166908

Ensembl transcript IDs: ENST00000354947.10, ENST00000422156.7, ENST00000540759.6, ENST00000548264.1, ENST00000550095.5, ENST00000550360.1, ENST00000550465.5, ENST00000551772.5

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCATGAGTCCTCTTAGGTCCCACCTCTGTGAGGTGCCAGGCTGCTaGCCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCAT +
Preference number: 1 (lower is better)
Translates to: IMSPLRSHLCEVPGC*PTLYPTCVGMAIFH
Trigger: ATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCACCTCACAGAGGTGGGACCTAAGAGGACTCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR TCA 90 bp CCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATaGAGGGGAGAGGGAGCTTCTCCCTATGGCCTCATGGCTTCTTGT +
Preference number: 1 (lower is better)
Translates to: PLTGYSSCYHLWSRR*RGEGASPYGLMASC
Trigger: ACAAGAAGCCATGAGGCCATAGGGAGAAGCTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR TCA 90 bp CACCCACTGAAGGGTTCCAGTCCCAGGAGAGGTGTGAGGTTCTGGTaGAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCT +
Preference number: 1 (lower is better)
Translates to: HPLKGSSPRRGVRFW*RAAIVKHLPPGLNA
Trigger: AGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAACCTCACACCTCTCCTGGGACTGGAACCCTTCAGTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR GCA 90 bp AAAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTaGCTTGGCCCCAGAGGCATTGTAGGGAGAGGAAGACAATGTATC +
Preference number: 1 (lower is better)
Translates to: KVEASRGMEDSKKNG*LGPRGIVGRGRQCI
Trigger: GATACATTGTCTTCCTCTCCCTACAATGCCTCTGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CCA 90 bp AGTCTTCTGACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTaGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGG +
Preference number: 1 (lower is better)
Translates to: SLLTGRCYMGAPTPN*VLLLLPPLEQKMKG
Trigger: CCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGTCAGAAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR GCA 90 bp GACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTaGTTGAGCCAGGTCCATCTGTCCAGTCAGGTCCTGAAGAAGGCA +
Preference number: 1 (lower is better)
Translates to: DTFSSSHTAKCIQSS*LSQVHLSSQVLKKA
Trigger: TGCCTTCTTCAGGACCTGACTGGACAGATGGACCTGGCTCAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CCA 90 bp ATGGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTaGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAACC +
Preference number: 1 (lower is better)
Translates to: MEGACSLNLAKEEEN*WLEYPHNSPKCLRT
Trigger: GGTTCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR TCA 90 bp CTCTGGGTTGCTGTGCCCAGATGTAGAGATGGGTGGAGATGGAATTaGGGTAAGGGAAGAGATTACTCAATCTATGACAGAGACCCAATC +
Preference number: 1 (lower is better)
Translates to: LWVAVPRCRDGWRWN*GKGRDYSIYDRDPI
Trigger: GATTGGGTCTCTGTCATAGATTGAGTAATCTCTTCCCTTACCTCAATTCCATCTCCACCCATCTCTACATCTGGGCACAGCAACCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR GCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAA +
Preference number: 1 (lower is better)
Translates to: KEPTRQDGVIWMEGA*SLNLAKEEENWWLE
Trigger: TTCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTaGATGGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAG +
Preference number: 1 (lower is better)
Translates to: ISEGQKEPTRQDGVI*MEGACSLNLAKEEE
Trigger: CTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR TCA 90 bp TATGAGATTATCACACATCAACTATCTTTGGAGGGGCTGAGTGATTaGGTTATGGCTCTGACTCCTCTCTGGGGGTGGAGAGTGAAGATG +
Preference number: 1 (lower is better)
Translates to: YEIITHQLSLEGLSD*VMALTPLWGWRVKM
Trigger: CATCTTCACTCTCCACCCCCAGAGAGGAGTCAGAGCCATAACTCAATCACTCAGCCCCTCCAAAGATAGTTGATGTGTGATAATCTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR GCA 90 bp TGTTGCCATGGCACTTCACAATGTACATCTCTCTTTCTGTGTTGCTaGCTCTTTCTCTTCACAGCCAACCTTCTCAGGAAAGTAATCAGC +
Preference number: 1 (lower is better)
Translates to: CCHGTSQCTSLFLCC*LFLFTANLLRKVIS
Trigger: GCTGATTACTTTCCTGAGAAGGTTGGCTGTGAAGAGAAAGAGGCAGCAACACAGAAAGAGAGATGTACATTGTGAAGTGCCATGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
3UTR TCA 90 bp GCAACAAATGAAGACATCCATACTGCCCATAACACATCAGCCATATaGTCAGAAAACCCATTTCTAAAGAGCAATGGTTGCTGGTGTCAC +
Preference number: 1 (lower is better)
Translates to: ATNEDIHTAHNTSAI*SENPFLKSNGCWCH
Trigger: GTGACACCAGCAACCATTGCTCTTTAGAAATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCATTTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CCA 90 bp ATCCAAGTAGAGATATTCCTTTCTTCTGGAAATAAACCTTGGGGATaGCTAGGCAGGATGAAAGGAAACTTTACATGGAGAATGAATCCT +
Preference number: 1 (lower is better)
Translates to: IQVEIFLSSGNKPWG*LGRMKGNFTWRMNP
Trigger: AGGATTCATTCTCCATGTAAAGTTTCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGAAGAAAGGAATATCTCTACTTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CCA 90 bp GAATTGATCCAAGTAGAGATATTCCTTTCTTCTGGAAATAAACCTTaGGGATGGCTAGGCAGGATGAAAGGAAACTTTACATGGAGAATG +
Preference number: 1 (lower is better)
Translates to: ELIQVEIFLSSGNKP*GWLGRMKGNFTWRM
Trigger: CATTCTCCATGTAAAGTTTCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGAAGAAAGGAATATCTCTACTTGGATCAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp TGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGCCCACCTCTGTGAGGTaGCAGGCTGCTGACCCACTC +
Preference number: 2 (lower is better)
Translates to: CYMGAPTPNWVLLLLPPLPTSVR*QAADPL
Trigger: GAGTGGGTCAGCAGCCTGGCACCTCACAGAGGTGGG...CAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp GAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCCCACCTCTGTGAGGTaGCAGGCTGCTGACCCACTC +
Preference number: 2 (lower is better)
Translates to: EDVIWGLQPLTGYSSCYHPTSVR*QAADPL
Trigger: GAGTGGGTCAGCAGCCTGGCACCTCACAGAGGTGGG...GTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAAGAGGTGCCAGGCTGCTaGCCCACTCTCTACCCCACC +
Preference number: 2 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLEEVPGC*PTLYPT
Trigger: GGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCACCTC...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCAGGAAGTTCCCACACTTaGGGCCTCCATCCTCTTGAA +
Preference number: 2 (lower is better)
Translates to: WKPQGGWRIARRMGALAPGSSHT*GLHPLE
Trigger: TTCAAGAGGATGGAGGCCTCAAGTGTGGGAACTTCC...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCAGCTTTTGGCCATCTCTaGGTTGCTGTGCCCAGATGT +
Preference number: 2 (lower is better)
Translates to: WKPQGGWRIARRMGALAPAFGHL*VAVPRC
Trigger: ACATCTGGGCACAGCAACCCAGAGATGGCCAAAAGC...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTGTCCAGTCAGGTCCTaGAGAAGGCAAACAACCCCC +
Preference number: 2 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSCPVRS*RRQTTP
Trigger: GGGGGTTGTTTGCCTTCTTCAGGACCTGACTGGACA...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCATGAATCCTACACCCTaGCCCATCATTCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: KWKPQGGWRIARRMGALAMNPTP*PIIPAS
Trigger: GGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCAT...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp GATGACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTGGCCTTAAAGTCATCTaGCAGCAGCATCACCGGGGG +
Preference number: 2 (lower is better)
Translates to: DDQSPIVGDKEATITAFTGLKVI*QQHHRG
Trigger: CCCCCGGTGATGCTGCTGCCAGATGACTTTAAGGCC...AGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
3UTR-3UTR TCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGAGAACCCCACCACCTTaGACATCAGAGAGAACCAGG +
Preference number: 2 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLRTPPP*TSERTR
Trigger: CCTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCT...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR-3UTR CCA 90 bp TGGAGAATGAATCCTACACCCTGGCCCATCATTCCAGCCTCCAAAACTGGCCACCAGGATGGAGTTATCTaGATGGAAGGAGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: WRMNPTPWPIIPASKTGHQDGVI*MEGACS
Trigger: GCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTG...GTGGCCAGTTTTGGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCATTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354947.10
3UTR-3UTR CCA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTGAAGAATGGGTGCCTTaGCCCCAGAGGCATTGTAGG +
Preference number: 2 (lower is better)
Translates to: IQSKAALHHHRPVADAQLEEWVP*PQRHCR
Trigger: CCTACAATGCCTCTGGGGCCAAGGCACCCATTCTTC...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGGAAGAATGGGTGCCTTaGCCCCAGAGGCATTGTAGG +
Preference number: 2 (lower is better)
Translates to: ETDQSSQIQSKAALHHHREEWVP*PQRHCR
Trigger: CCTACAATGCCTCTGGGGCCAAGGCACCCATTCTTC...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGACTTTACATGGAGAATaGATCCTACACCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: LGTPLATTFGAEDEGERETLHGE*ILHPGP
Trigger: TGGGCCAGGGTGTAGGATTCATTCTCCATGTAAAGT...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGGGAAGTTCCCACACTTaGGGCCTCCATCCTCTTGAA +
Preference number: 2 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRGSSHT*GLHPLE
Trigger: TTCAAGAGGATGGAGGCCTCAAGTGTGGGAACTTCC...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTATTGAGTTATGGCTCTaGCTCCTCTCTGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: IQSKAALHHHRPVADAQLIELWL*LLSGGG
Trigger: TCCACCCCCAGAGAGGAGTCAGAGCCATAACTCAAT...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGCTTCCCCTAGCTCCTTaGACATCAGAGAGAACCAGG +
Preference number: 2 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMLPLAP*TSERTR
Trigger: CCTGGTTCTCTCTGATGTTCAAGGAGCTAGGGGAAG...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540759.6
3UTR-3UTR GCA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCTCCCACACAGCAAAGTaGATCCAGAGTAGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: KWKPQGGWRIARRMGALASHTAK*IQSSCL
Trigger: CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGA...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCATTCCATCGTGTGTGTaGATGCCTGCACCCACATCT +
Preference number: 2 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSIPSCV*MPAPTS
Trigger: AGATGTGGGTGCAGGCATGCACACACACGATGGAAT...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGTCTGGAAATAAACCTTaGGGATGGCTAGGCAGGATG +
Preference number: 2 (lower is better)
Translates to: LGTPLATTFGAEDEGERESGNKP*GWLGRM
Trigger: CATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGA...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAAGAACCCCACCACCTTaGACATCAGAGAGAACCAGG +
Preference number: 2 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRRTPPP*TSERTR
Trigger: CCTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCT...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354947.10
3UTR-3UTR TCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAAGAACCCCACCACCTTaGACATCAGAGAGAACCAGG +
Preference number: 2 (lower is better)
Translates to: GRSLQPEFSKGRRELVARRTPPP*TSERTR
Trigger: CCTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCT...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR-3UTR GCA 90 bp AGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCATTCCATCGTGTGTGTaGATGCCTGCACCCACATCT +
Preference number: 2 (lower is better)
Translates to: SKAALHHHRPVADAQLYVIPSCV*MPAPTS
Trigger: AGATGTGGGTGCAGGCATGCACACACACGATGGAAT...GACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTATCCCCCAGGCTTGAATaGTTTTGGCCATCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLSPRLE*FWPSLG
Trigger: ACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGA...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACTCCAGAGTAGTTGCTTaGGCCAGGTCCATCTGTCCA +
Preference number: 2 (lower is better)
Translates to: SCETDQSSQIQSKAALHHSRVVA*ARSICP
Trigger: TGGACAGATGGACCTGGCTCAAGCAACTACTCTGGA...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp CTTTCTTCTGGAAATAAACCTTGGGGATGGCTAGGCAGGATGAAAGGAAACTTTTGGCCACACACCCACTaGAGGGTTCCAGTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LSSGNKPWGWLGRMKGNFWPHTH*RVPVPG
Trigger: TCCTGGGACTGGAACCCTTCAGTGGGTGTGTGGCCA...AAAGTTTCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTAAGAGCAAAGCAGCTTTaGATCACCACAGGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLRAKQL*ITTGQL
Trigger: CAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGAGGCTTGAATGCTTTTaGCCATCTCTGGGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRRLECF*PSLGCC
Trigger: ACAGCAACCCAGAGATGGCCAAAAGCATTCAAGCCT...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACATGAATCCTACACCCTaGCCCATCATTCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SCETDQSSQIQSKAALHHMNPTP*PIIPAS
Trigger: GGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCAT...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CAA 90 bp ACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTGCTaGAGCCAGGTCCATCTGTCCAGTCAGGTCCTGAAGAAGGCAAAC +
Preference number: 2 (lower is better)
Translates to: TFSSSHTAKCIQSSC*SQVHLSSQVLKKAN
Trigger: GTTTGCCTTCTTCAGGACCTGACTGGACAGATGGACCTGGCTCAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp AGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCACATCTGTAGTATCTTaGGTGTCATCCATCCTAGGG +
Preference number: 2 (lower is better)
Translates to: SKAALHHHRPVADAQLYVTSVVS*VSSILG
Trigger: CCCTAGGATGGATGACACTCAAGATACTACAGATGT...GACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGTCCATCCTCTTGAAATaGCCAGAATTGATCCAAGTA +
Preference number: 2 (lower is better)
Translates to: LGTPLATTFGAEDEGERESILLK*PELIQV
Trigger: TACTTGGATCAATTCTGGTCATTTCAAGAGGATGGA...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGCATCCAGAGTAGTTaGTTGAGCCAGGTCCATCTG +
Preference number: 2 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLECIQSS*LSQVHL
Trigger: CAGATGGACCTGGCTCAAGCAACTACTCTGGATGCA...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCTGCATCCAGAGTAGTTaGTTGAGCCAGGTCCATCTG +
Preference number: 2 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCCIQSS*LSQVHL
Trigger: CAGATGGACCTGGCTCAAGCAACTACTCTGGATGCA...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACATCTCTGGGTTGCTGTaGCCAGATGTAGAGATGGGT +
Preference number: 2 (lower is better)
Translates to: SCETDQSSQIQSKAALHHISGLL*PDVEMG
Trigger: ACCCATCTCTACATCTGGGCACAGCAACCCAGAGAT...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp TGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGTCCCCCAGGCTTGAATaGTTTTGGCCATCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: WCHRVLLHSSGEREMVGMSPRLE*FWPSLG
Trigger: ACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGA...CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAAGGCTTGAATGCTTTTaGCCATCTCTGGGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRRLECF*PSLGCC
Trigger: ACAGCAACCCAGAGATGGCCAAAAGCATTCAAGCCT...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGAATAAACCTTGGGGATaGCTAGGCAGGATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMNKPWG*LGRMKG
Trigger: TCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATT...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTAACATCTGTAGTATCTTaGGTGTCATCCATCCTAGGG +
Preference number: 2 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLTSVVS*VSSILG
Trigger: CCCTAGGATGGATGACACTCAAGATACTACAGATGT...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAAGGTGTGAGGTTCTGGTaGAGAGCAGCAATAGTCAAA +
Preference number: 2 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLEGVRFW*RAAIVK
Trigger: TTTGACTATTGCTGCTCTTCACCAGAACCTCACACC...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp GAAGCGTGTTGCCATGGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCTCCCTGTGGAAAAGGTaGTTGTTGACCTTGATCTTG +
Preference number: 2 (lower is better)
Translates to: EACCHGTSQCTGDSWRGCSLWKR*LLTLIL
Trigger: CAAGATCAAGGTCAACAATCACCTTTTCCACAGGGA...GCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCCATGGCAACACGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
3UTR-3UTR GCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCCCCAATCCAATTCTCTaGATAATCATGAGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSPNPIL*IIMSPL
Trigger: AAGAGGACTCATGATTATGCAGAGAATTGGATTGGG...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATCTGGAAATAAACCTTaGGGATGGCTAGGCAGGATG +
Preference number: 2 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLESGNKP*GWLGRM
Trigger: CATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGA...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp GATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTACCAGGAGGGAAGCATaGCATAGTGAGTTTTATAAA +
Preference number: 2 (lower is better)
Translates to: DQSSQIQSKAALHHHRPVTRREA*HSEFYK
Trigger: TTTATAAAACTCACTATGGCATGCTTCCCTCCTGGT...AACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp GAAGCGTGTTGCCATGGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCAATCTTGGTCATCAATaGCAAATCGATCACGGAGGT +
Preference number: 2 (lower is better)
Translates to: EACCHGTSQCTGDSWRGCNLGHQ*QIDHGG
Trigger: ACCTCCGTGATCGATTTGGCATTGATGACCAAGATT...GCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCCATGGCAACACGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
3UTR-3UTR CCA 90 bp CTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATCAGGAAGATGTTATATaGGGGCTCCAACCCCTAACT +
Preference number: 2 (lower is better)
Translates to: LVSQSFIAFIGGKGDGWNQEDVI*GLQPLT
Trigger: AGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTG...ATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp CCTAACTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAAGATTACTCAATCTATaGCAGAGACCCAATCCAATT +
Preference number: 2 (lower is better)
Translates to: PNWVLLLLPPLEQKMKGRRLLNL*QRPNPI
Trigger: AATTGGATTGGGTCTCTGTCATAGATTGAGTAATCT...TCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAG +
Preference number: 2 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMWMEGA*SLNLAK
Trigger: CTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCA...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAAAGGAAGAAGAGAACTaGTGGCTAGAATATCCCCAC +
Preference number: 2 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEKEEEN*WLEYPH
Trigger: GTGGGGATATTCTAGCCACCAGTTCTCTTCTTCCTT...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR-3UTR CCA 90 bp CTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATAATAAACCTTGGGGATaGCTAGGCAGGATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: LVSQSFIAFIGGKGDGWNNKPWG*LGRMKG
Trigger: TCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATT...ATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACACCAGGAGGGAAGCATaGCATAGTGAGTTTTATAAA +
Preference number: 2 (lower is better)
Translates to: SCETDQSSQIQSKAALHHTRREA*HSEFYK
Trigger: TTTATAAAACTCACTATGGCATGCTTCCCTCCTGGT...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR GCA 90 bp TCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAACTGGGTACTCCTCTTaGTACCACCTTTGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: SQSFIAFIGGKGDGWNEKTGYSS*YHLWSR
Trigger: TCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGT...TTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR TCA 90 bp TATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTACACTAGGGAACCCTTaGGGTCATACTTCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: YTFWFLLRKSISLRVGNSTLGNP*GHTSCA
Trigger: TGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT...AGAATTGCCCACCCTTAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
3UTR-3UTR GCA 90 bp TCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAATGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAG +
Preference number: 2 (lower is better)
Translates to: SQSFIAFIGGKGDGWNEKWMEGA*SLNLAK
Trigger: CTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCA...TTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000354947.10
3UTR-3UTR TCA 90 bp TGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGGGGTTCTCAACATTATaGGATTATCACACATCAACT +
Preference number: 2 (lower is better)
Translates to: WCHRVLLHSSGEREMVGMGFSTL*DYHTST
Trigger: AGTTGATGTGTGATAATCTCATAATGTTGAGAACCC...CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CCA 90 bp GTTGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTATCTGCACAGGAAGACGGTaGCTAAACATATTGCGCATC +
Preference number: 2 (lower is better)
Translates to: VEKVHILKGGQFFNLFLICTGRR*LNILRI
Trigger: GATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCA...GATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
3UTR-3UTR TCA 90 bp ATGATCAGAAAACCCATTTCTAAAGAGCAATGGTTGCTGGTGTCACAGAGTTTTGGGTTCTCAACATTATaGGATTATCACACATCAACT +
Preference number: 2 (lower is better)
Translates to: MIRKPISKEQWLLVSQSFGFSTL*DYHTST
Trigger: AGTTGATGTGTGATAATCTCATAATGTTGAGAACCC...AAAACTCTGTGACACCAGCAACCATTGCTCTTTAGAAATGGGTTTTCTGATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR TCA 72 bp CCTCTTAGGTCCCACCTCTGTGAGGTGCCAGGCTGCTaGCCCACTCTCTACCCCACCTGTGTAGGAATGGCC +
Preference number: 3 (lower is better)
Translates to: PLRSHLCEVPGC*PTLYPTCVGMA
Trigger: GGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCACCTCACAGAGGTGGGACCTAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR GCA 72 bp GCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTaGCTTGGCCCCAGAGGCATTGTAGGGAGAGGAAGA +
Preference number: 3 (lower is better)
Translates to: ASRGMEDSKKNG*LGPRGIVGRGR
Trigger: TCTTCCTCTCCCTACAATGCCTCTGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR TCA 72 bp GGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATaGAGGGGAGAGGGAGCTTCTCCCTATGGCCTCATG +
Preference number: 3 (lower is better)
Translates to: GYSSCYHLWSRR*RGEGASPYGLM
Trigger: CATGAGGCCATAGGGAGAAGCTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CCA 72 bp CATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTaGGTTGCTGTGCCCAGATGTAGAGATGGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: HLPPGLNAFGHL*VAVPRCRDGWR
Trigger: TCTCCACCCATCTCTACATCTGGGCACAGCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CAA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGCAGAACCCCACCACCTaGAACATCAGAGAGAACCAG +
Preference number: 3 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLQNPTT*NIRENQ
Trigger: CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTG...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR TCA 72 bp AGAGGGAGCTTCTCCCTATGGCCTCATGGCTTCTTGTaGGACAGATCAGTCCAGCCAGATACAGAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: RGSFSLWPHGFL*DRSVQPDTEQS
Trigger: GCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGAAGCCATGAGGCCATAGGGAGAAGCTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CAA 90 bp CCTAACTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGACAGAACCCCACCACCTaGAACATCAGAGAGAACCAG +
Preference number: 3 (lower is better)
Translates to: PNWVLLLLPPLEQKMKGRQNPTT*NIRENQ
Trigger: CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTG...TCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354947.10
3UTR-3UTR CAA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGACAGAACCCCACCACCTaGAACATCAGAGAGAACCAG +
Preference number: 3 (lower is better)
Translates to: GRSLQPEFSKGRRELVARQNPTT*NIRENQ
Trigger: CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTG...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR-3UTR CAA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGCACATCTGTAGTATCTaGAGTGTCATCCATCCTAGG +
Preference number: 3 (lower is better)
Translates to: LGTPLATTFGAEDEGEREHICSI*SVIHPR
Trigger: CCTAGGATGGATGACACTCAAGATACTACAGATGTG...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CAA 90 bp TGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACCCTTCCCCTAGCTCCTaGAACATCAGAGAGAACCAG +
Preference number: 3 (lower is better)
Translates to: CETDQSSQIQSKAALHHHPSPSS*NIRENQ
Trigger: CTGGTTCTCTCTGATGTTCAAGGAGCTAGGGGAAGG...GTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540759.6
3UTR GCA 72 bp AGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATaGTTTTGGCCATCTCTGGGTTGCTGTGCCCAGATG +
Preference number: 3 (lower is better)
Translates to: SSNSQTSSPRLE*FWPSLGCCAQM
Trigger: CATCTGGGCACAGCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CCA 72 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTaGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: TGRCYMGAPTPN*VLLLLPPLEQK
Trigger: CTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR TCA 72 bp ATCACACATCAACTATCTTTGGAGGGGCTGAGTGATTaGGTTATGGCTCTGACTCCTCTCTGGGGGTGGAGA +
Preference number: 3 (lower is better)
Translates to: ITHQLSLEGLSD*VMALTPLWGWR
Trigger: TCTCCACCCCCAGAGAGGAGTCAGAGCCATAACTCAATCACTCAGCCCCTCCAAAGATAGTTGATGTGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CCA 72 bp GGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTaGATGGAAGGAGCCTGCAGCCTGAATTTAGCAAAG +
Preference number: 3 (lower is better)
Translates to: GQKEPTRQDGVI*MEGACSLNLAK
Trigger: CTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR-3UTR CAA 90 bp AGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCCACATCTGTAGTATCTaGAGTGTCATCCATCCTAGG +
Preference number: 3 (lower is better)
Translates to: SKAALHHHRPVADAQLYVHICSI*SVIHPR
Trigger: CCTAGGATGGATGACACTCAAGATACTACAGATGTG...GACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR-3UTR CAA 90 bp GAAGCGTGTTGCCATGGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCTCACTGGATACTTCTTaGATGACCAGAGTCCGATCG +
Preference number: 3 (lower is better)
Translates to: EACCHGTSQCTGDSWRGCSLDTS*MTRVRS
Trigger: CGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGA...GCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCCATGGCAACACGCTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
3UTR TCA 72 bp TACACACATCCAGGGAGTAGGGGAAGTTCCCACACTTaGGGCCTCCATCCTCTTGAAATGACCAGAATTGAT +
Preference number: 3 (lower is better)
Translates to: YTHPGSRGSSHT*GLHPLEMTRID
Trigger: ATCAATTCTGGTCATTTCAAGAGGATGGAGGCCTCAAGTGTGGGAACTTCCCCTACTCCCTGGATGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR TCA 72 bp GATTATCACACATCAACTATCTTTGGAGGGGCTGAGTaGTTGAGTTATGGCTCTGACTCCTCTCTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: DYHTSTIFGGAE*LSYGSDSSLGV
Trigger: CACCCCCAGAGAGGAGTCAGAGCCATAACTCAATCACTCAGCCCCTCCAAAGATAGTTGATGTGTGATAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR GCA 72 bp ACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGG +
Preference number: 3 (lower is better)
Translates to: TRQDGVIWMEGA*SLNLAKEEENW
Trigger: CCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR CCA 72 bp GCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTaGTGGCTAGAATATCCCCACAATTCCCCCAAGTGT +
Preference number: 3 (lower is better)
Translates to: ACSLNLAKEEEN*WLEYPHNSPKC
Trigger: ACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR-3UTR CAA 90 bp GTTTCGGGTAAGGGACACCAAGTAATCTTGGTCATCAATGCCAAATCGATCACGTTGTTGACCTTGATCTaGGAGCTGGCCTTAAAGTCA +
Preference number: 3 (lower is better)
Translates to: VSGKGHQVILVINAKSITLLTLI*ELALKS
Trigger: TGACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAA...CGTGATCGATTTGGCATTGATGACCAAGATTACTTGGTGTCCCTTACCCGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
3UTR GCA 72 bp AATTCAGACACTTTTAGTTCATCCCACACAGCAAAGTaGATCCAGAGTAGTTGCTTGAGCCAGGTCCATCTG +
Preference number: 3 (lower is better)
Translates to: NSDTFSSSHTAK*IQSSCLSQVHL
Trigger: CAGATGGACCTGGCTCAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR TCA 72 bp GAAGTTCCCACACTTGAGGCCTCCATCCTCTTGAAATaGCCAGAATTGATCCAAGTAGAGATATTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: EVPTLEASILLK*PELIQVEIFLS
Trigger: AGAAAGGAATATCTCTACTTGGATCAATTCTGGTCATTTCAAGAGGATGGAGGCCTCAAGTGTGGGAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: KWKPQGGWRIARRMGALARRYRG*WDRGGR
Trigger: GCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCG...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGGGCGAAGCCGAAACCTaGGCCGGGGCCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLGEAET*AGACCR
Trigger: GCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCC...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGTGCGCTGCTGTCACGTaGCCGGAGGCCGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQCAAVT*PEAGQR
Trigger: CCGCTGTCCGGCCTCCGGTCACGTGACAGCAGCGCA...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422156.7
CDS-3UTR GCA 90 bp GAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACACCTGGGCCGGGGCCTaGTGTCGCCGCCGATACCGT +
Preference number: 4 (lower is better)
Translates to: EDVIWGLQPLTGYSSCYHTWAGA*CRRRYR
Trigger: ACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGT...GTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTACCTGGGCCGGGGCCTaGTGTCGCCGCCGATACCGT +
Preference number: 4 (lower is better)
Translates to: DQSSQIQSKAALHHHRPVTWAGA*CRRRYR
Trigger: ACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGT...AACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLRRYRG*WDRGGR
Trigger: GCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCG...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAACCTGGGCCGGGGCCTaGTGTCGCCGCCGATACCGT +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARTWAGA*CRRRYR
Trigger: ACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGT...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCCACCTCTGTGAGGTaGCAGGCTGCTGACCCACTC +
Preference number: 4 (lower is better)
Translates to: KWKPQGGWRIARRMGALAPTSVR*QAADPL
Trigger: GAGTGGGTCAGCAGCCTGGCACCTCACAGAGGTGGG...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGCGATACCGTGGCTGGTaGGACCGAGGAGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: LGTPLATTFGAEDEGERERYRGW*DRGGRH
Trigger: ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCG...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GATGACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: DDQSPIVGDKEATITAFTRRYRG*WDRGGR
Trigger: GCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCG...AGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCGCCGCCGATACCGTaGCTGGTGGGACCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMSPPIP*LVGPRR
Trigger: CCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGA...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGTCGCCGCCGATACCGTaGCTGGTGGGACCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRSPPIP*LVGPRR
Trigger: CCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGA...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAGGCGAAGCCGAAACCTaGGCCGGGGCCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRGEAET*AGACCR
Trigger: GCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCC...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGGTCCCCATCCACCTCTaGCTCATCCTCCCGCACGGG +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRVPIHL*LILPHG
Trigger: CCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGAC...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGCGATACCGTGGCTGGTaGGACCGAGGAGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLRYRGW*DRGGRH
Trigger: ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCG...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp TCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCGGCGAAGCCGAAACCTaGGCCGGGGCCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: SYFLCTGRRWLNILRITSGEAET*AGACCR
Trigger: GCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCC...GCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCGGACTCAAACTCTCCTaGGCCCAGGGGCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSGLKLS*AQGPMG
Trigger: TCCCATCGGCCCCTGGGCCCAGGAGAGTTTGAGTCC...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCAGTTCAGAGCCCCGAATaGTGTCGTGGATGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: WKPQGGWRIARRMGALAPVQSPE*CRGCLA
Trigger: TGCTAGGCATCCACGACATCATTCGGGGCTCTGAAC...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp TGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACGTCCCCATCCACCTCTaGCTCATCCTCCCGCACGGG +
Preference number: 4 (lower is better)
Translates to: CETDQSSQIQSKAALHHHVPIHL*LILPHG
Trigger: CCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGAC...GTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAGTCCCCATCCACCTCTaGCTCATCCTCCCGCACGGG +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARVPIHL*LILPHG
Trigger: CCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGAC...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp GTTTCGGGTAAGGGACACCAAGTAATCTTGGTCATCAATGCCAAATCGATCACGACCTGGGCCGGGGCCTaGTGTCGCCGCCGATACCGT +
Preference number: 4 (lower is better)
Translates to: VSGKGHQVILVINAKSITTWAGA*CRRRYR
Trigger: ACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGT...CGTGATCGATTTGGCATTGATGACCAAGATTACTTGGTGTCCCTTACCCGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR GCA 90 bp TGGAGAATGAATCCTACACCCTGGCCCATCATTCCAGCCTCCAAAACTGGCCACGAGGTCCAGTCAGGCTaGAGTCCCCATCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: WRMNPTPWPIIPASKTGHEVQSG*SPHPPL
Trigger: CAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTC...GTGGCCAGTTTTGGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCATTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGGAGGTCCAGTCAGGCTaGAGTCCCCATCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLEVQSG*SPHPPL
Trigger: CAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTC...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTAGCGCAACCGACCAAGTaGAAGCCGGAGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLAQPTK*KPEPAA
Trigger: AGCTGCCGGCTCCGGCTTCCACTTGGTCGGTTGCGC...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGCGATACCGTGGCTGGTaGGACCGAGGAGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMRYRGW*DRGGRH
Trigger: ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCG...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCRRYRG*WDRGGR
Trigger: GCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCG...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: SYFLCTGRRWLNILRITSRRYRG*WDRGGR
Trigger: GCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCG...GCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGATCGCCGCCGATACCGTaGCTGGTGGGACCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRSPPIP*LVGPRR
Trigger: CCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGA...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGCGAAGCCGAAACCTaGGCCGGGGCCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEGEAET*AGACCR
Trigger: GCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCC...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGGCCTCCGATACCCTCTaGGGAGGTGCCATAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQASDTL*GGAIGA
Trigger: GGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGC...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGGGAAGCGACCATCACTaGCTTCACTTTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLGSDHH*LHFRWG
Trigger: CCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCC...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000550465.5
CDS-3UTR GCA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTGAGGTCCAGTCAGGCTaGAGTCCCCATCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: IQSKAALHHHRPVADAQLEVQSG*SPHPPL
Trigger: CAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTC...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCGGCGCTCACCTGCGCTaGTGTCACGTGACCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVIGAHLR*CHVTGG
Trigger: GCCTCCGGTCACGTGACAGCAGCGCAGGTGAGCGCC...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422156.7
CDS-3UTR CCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCGCGCAACCGACCAAGTaGAAGCCGGAGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCAQPTK*KPEPAA
Trigger: AGCTGCCGGCTCCGGCTTCCACTTGGTCGGTTGCGC...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GGGCAGATTTTCCCTGTGGAAAAGGTGATTGTTGACCTTGATCTTGGAGCTGGCCGATACCGTGGCTGGTaGGACCGAGGAGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: GQIFPVEKVIVDLDLGAGRYRGW*DRGGRH
Trigger: ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCG...GCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAATCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTCGCCGCCGATACCGTaGCTGGTGGGACCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVISPPIP*LVGPRR
Trigger: CCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGA...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGAGCTCATTGATCGAGTaGGCTACGCCCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGTPLATTFGAEDEGERESSLIE*ATPHRN
Trigger: GTTCCTGTGGGGCGTAGCCCACTCGATCAATGAGCT...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGACCGGGGGAGGCACCTaGCTGAGCTCATTGATCGAG +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQTGGGT*LSSLIE
Trigger: CTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGT...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp TGGAGAATGAATCCTACACCCTGGCCCATCATTCCAGCCTCCAAAACTGGCCACGGCCTTAAAGTCATCTaGCAGCAGCATCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: WRMNPTPWPIIPASKTGHGLKVI*QQHHRG
Trigger: CCCCCGGTGATGCTGCTGCCAGATGACTTTAAGGCC...GTGGCCAGTTTTGGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCATTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGGGGCGCTTCCTCCTCTaGTTCAGAGCCCCGAATGAT +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLGRFLL*FRAPND
Trigger: ATCATTCGGGGCTCTGAACCAGAGGAGGAAGCGCCC...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
3UTR CAA 72 bp CCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTaGGAGCAGAAGATGAAGGGGAGAGGGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PTPNWVLLLLPP*EQKMKGRGSFS
Trigger: GGAGAAGCTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGCTTCGTTGTCCACACTaGCTCGGTACATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLLRCPH*LGTSPG
Trigger: TCCTGGGGATGTACCGAGTCAGTGTGGACAACGAAG...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCGTTCAGAGCCCCGAATaGTGTCGTGGATGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSVQSPE*CRGCLA
Trigger: TGCTAGGCATCCACGACATCATTCGGGGCTCTGAAC...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTTGTCCAGTCAGGTCCTaGAGAAGGCAAACAACCCCC +
Preference number: 4 (lower is better)
Translates to: LLTHSLPHLCRNGHIPSCCPVRS*RRQTTP
Trigger: GGGGGTTGTTTGCCTTCTTCAGGACCTGACTGGACA...ACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCGAGGTGCCAGGCTGCTaGCCCACTCTCTACCCCACC +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVIEVPGC*PTLYPT
Trigger: GGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCACCTC...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR TCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGGGAAGTTCCCACACTTaGGGCCTCCATCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LGTPLATTFGAEDEGEREGSSHT*GLHPLE
Trigger: TTCAAGAGGATGGAGGCCTCAAGTGTGGGAACTTCC...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GATGACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTGGAAGCGACCATCACTaGCTTCACTTTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DDQSPIVGDKEATITAFTGSDHH*LHFRWG
Trigger: CCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCC...AGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR GCA 90 bp CTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCCACCTCTGTGAGGTaGCAGGCTGCTGACCCACTC +
Preference number: 4 (lower is better)
Translates to: LVKSSNSQTSSPRLECFWPTSVR*QAADPL
Trigger: GAGTGGGTCAGCAGCCTGGCACCTCACAGAGGTGGG...CCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp ATGGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCTATGCATGTCAGCGCGCAACCGACCAAGTaGAAGCCGGAGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: MALHNVLVIVGEVAMHVSAQPTK*KPEPAA
Trigger: AGCTGCCGGCTCCGGCTTCCACTTGGTCGGTTGCGC...GCTGACATGCATAGCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGCGCAACCGACCAAGTaGAAGCCGGAGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEAQPTK*KPEPAA
Trigger: AGCTGCCGGCTCCGGCTTCCACTTGGTCGGTTGCGC...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GTCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCGATACCGTGGCTGGTaGGACCGAGGAGGACGCCAT +
Preference number: 4 (lower is better)
Translates to: VILPVHRKTVAKHIAHHKRYRGW*DRGGRH
Trigger: ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCG...CTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMRRYRG*WDRGGR
Trigger: GCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCG...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp ATTTTCCCTGTGGAAAAGGTGATTGTTGACCTTGATCTTGGAGCTGGCCTTAAAGGCGAAGCCGAAACCTaGGCCGGGGCCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: IFPVEKVIVDLDLGAGLKGEAET*AGACCR
Trigger: GCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCC...TTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCGCTTCTTCTTGGTCTTaGAGGCGAAGCCGAAACCTG +
Preference number: 4 (lower is better)
Translates to: KWKPQGGWRIARRMGALAASSWS*RRSRNL
Trigger: CAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGC...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCACGAAATGCTTCTTCTTaGTCTTGGAGGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: WKPQGGWRIARRMGALAPRNASS*SWRRSR
Trigger: TCGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCG...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGAGCTCATTGATCGAGTaGGCTACGCCCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLSSLIE*ATPHRN
Trigger: GTTCCTGTGGGGCGTAGCCCACTCGATCAATGAGCT...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAACCGGGGGAGGCACCTaGCTGAGCTCATTGATCGAG +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARTGGGT*LSSLIE
Trigger: CTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGT...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCCCCCGAATGATGTCGTaGATGCCTAGCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSPRMMS*MPSRRL
Trigger: CAGCCTTCTGCTAGGCATCCACGACATCATTCGGGG...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGCCCCGAATGATGTCGTaGATGCCTAGCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLPRMMS*MPSRRL
Trigger: CAGCCTTCTGCTAGGCATCCACGACATCATTCGGGG...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACGGGCGCTTCCTCCTCTaGTTCAGAGCCCCGAATGAT +
Preference number: 4 (lower is better)
Translates to: EDVIWGLQPLTGYSSCYHGRFLL*FRAPND
Trigger: ATCATTCGGGGCTCTGAACCAGAGGAGGAAGCGCCC...GTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAGCCTCCGATACCCTCTaGGGAGGTGCCATAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRASDTL*GGAIGA
Trigger: GGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGC...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCGCCTCCGATACCCTCTaGGGAGGTGCCATAGGAGCC +
Preference number: 4 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCASDTL*GGAIGA
Trigger: GGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGC...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGGCTTTTGGCCATCTCTaGGTTGCTGTGCCCAGATGT +
Preference number: 4 (lower is better)
Translates to: LGTPLATTFGAEDEGEREAFGHL*VAVPRC
Trigger: ACATCTGGGCACAGCAACCCAGAGATGGCCAAAAGC...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGCTTCGTTGTCCACACTaGCTCGGTACATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMLRCPH*LGTSPG
Trigger: TCCTGGGGATGTACCGAGTCAGTGTGGACAACGAAG...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGGTTCAGAGCCCCGAATaGTGTCGTGGATGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQVQSPE*CRGCLA
Trigger: TGCTAGGCATCCACGACATCATTCGGGGCTCTGAAC...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGTCCCCATCCACCTCTaGCTCATCCTCCCGCACGGG +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMVPIHL*LILPHG
Trigger: CCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGAC...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTGTCCAGTCAGGTCCTaGAGAAGGCAAACAACCCCC +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMCPVRS*RRQTTP
Trigger: GGGGGTTGTTTGCCTTCTTCAGGACCTGACTGGACA...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTCCAGAGTAGTTGCTTaGGCCAGGTCCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSSRVVA*ARSICP
Trigger: TGGACAGATGGACCTGGCTCAAGCAACTACTCTGGA...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGGCCACACACCCACTaGAGGGTTCCAGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLEWPHTH*RVPVPG
Trigger: TCCTGGGACTGGAACCCTTCAGTGGGTGTGTGGCCA...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp TGGAGAATGAATCCTACACCCTGGCCCATCATTCCAGCCTCCAAAACTGGCCACCCTCATGGCTTCTTGTaGGACAGATCAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WRMNPTPWPIIPASKTGHPHGFL*DRSVQP
Trigger: TGGCTGGACTGATCTGTCTCACAAGAAGCCATGAGG...GTGGCCAGTTTTGGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCATTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAGGAAGCGACCATCACTaGCTTCACTTTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRGSDHH*LHFRWG
Trigger: CCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCC...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGGACAGTAGAGATCTCTaGCCCAGCCCCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQDSRDL*PSPMLD
Trigger: GTCAAGCATGGGGCTGGGGCAGAGATCTCTACTGTC...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp CTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGGGAGATTCCATCGTGTGTGTaGATGCCTGCACCCACATCT +
Preference number: 4 (lower is better)
Translates to: LGTPLATTFGAEDEGEREIPSCV*MPAPTS
Trigger: AGATGTGGGTGCAGGCATGCACACACACGATGGAAT...CTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGCGCAACCGACCAAGTaGAAGCCGGAGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMAQPTK*KPEPAA
Trigger: AGCTGCCGGCTCCGGCTTCCACTTGGTCGGTTGCGC...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp ATTTTCCCTGTGGAAAAGGTGATTGTTGACCTTGATCTTGGAGCTGGCCTTAAATCGCCGCCGATACCGTaGCTGGTGGGACCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IFPVEKVIVDLDLGAGLKSPPIP*LVGPRR
Trigger: CCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGA...TTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp GATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTCCTTTTCCTTATCGCTaGCTTCCCGGGACACTAGGG +
Preference number: 4 (lower is better)
Translates to: DQSSQIQSKAALHHHRPVPFPYR*LPGTLG
Trigger: CCCTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGG...AACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTCCTTTTCCTTATCGCTaGCTTCCCGGGACACTAGGG +
Preference number: 4 (lower is better)
Translates to: IQSKAALHHHRPVADAQLPFPYR*LPGTLG
Trigger: CCCTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGG...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCCCGAATGATGTCGTaGATGCCTAGCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRPRMMS*MPSRRL
Trigger: CAGCCTTCTGCTAGGCATCCACGACATCATTCGGGG...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGCCCCGAATGATGTCGTaGATGCCTAGCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQPRMMS*MPSRRL
Trigger: CAGCCTTCTGCTAGGCATCCACGACATCATTCGGGG...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAGGGCGCTTCCTCCTCTaGTTCAGAGCCCCGAATGAT +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARGRFLL*FRAPND
Trigger: ATCATTCGGGGCTCTGAACCAGAGGAGGAAGCGCCC...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCGGACTCAAACTCTCCTaGGCCCAGGGGCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVIGLKLS*AQGPMG
Trigger: TCCCATCGGCCCCTGGGCCCAGGAGAGTTTGAGTCC...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCAAGGCTTGAATGCTTTTaGCCATCTCTGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WKPQGGWRIARRMGALAPRLECF*PSLGCC
Trigger: ACAGCAACCCAGAGATGGCCAAAAGCATTCAAGCCT...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CCTAACTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGAGAAGAATGGGTGCCTTaGCCCCAGAGGCATTGTAGG +
Preference number: 4 (lower is better)
Translates to: PNWVLLLLPPLEQKMKGREEWVP*PQRHCR
Trigger: CCTACAATGCCTCTGGGGCCAAGGCACCCATTCTTC...TCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
3UTR CAA 72 bp ACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTaGCATCACCACAGGCCAGTTGCTGATGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TDQSSQIQSKAA*HHHRPVADAQL
Trigger: AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCGGTGTGAGGTTCTGGTaGAGAGCAGCAATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: KWKPQGGWRIARRMGALAGVRFW*RAAIVK
Trigger: TTTGACTATTGCTGCTCTTCACCAGAACCTCACACC...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp CCTAACTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGACCACAGGCCAGTTGCTaGTGCCCAGCTTTATGTCTA +
Preference number: 4 (lower is better)
Translates to: PNWVLLLLPPLEQKMKGRPQASC*CPALCL
Trigger: TAGACATAAAGCTGGGCATCAGCAACTGGCCTGTGG...TCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAAGGAAGCGACCATCACTaGCTTCACTTTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLEGSDHH*LHFRWG
Trigger: CCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCC...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCATGTAGCTGTCTTCGGAAGCGACCATCACTaGCTTCACTTTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HRKTVAKHIAHHKHVAVFGSDHH*LHFRWG
Trigger: CCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCC...GAAGACAGCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR GCA 90 bp TGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGTCCCCCAGGCTTGAATaGTTTTGGCCATCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CYMGAPTPNWVLLLLPPLSPRLE*FWPSLG
Trigger: ACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGA...CAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGTCCCCCAGGCTTGAATaGTTTTGGCCATCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRSPRLE*FWPSLG
Trigger: ACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGA...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp TGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGAGCAAGAAGAATGGGTaGCTTGGCCCCAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: CYMGAPTPNWVLLLLPPLSKKNG*LGPRGI
Trigger: AATGCCTCTGGGGCCAAGGCACCCATTCTTCTTGCT...CAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp ACCTTTTCCTTATCGCTGGCTTCCCGGGACACTAGGGAACCCTTGAGGTCATACCGAAATGCTTCTTCTTaGTCTTGGAGGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: TFSLSLASRDTREPLRSYRNASS*SWRRSR
Trigger: TCGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCG...GTATGACCTCAAGGGTTCCCTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp CACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCATGTAGCTGTCTTCGGCCTTAAAGTCATCTaGCAGCAGCATCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: HRKTVAKHIAHHKHVAVFGLKVI*QQHHRG
Trigger: CCCCCGGTGATGCTGCTGCCAGATGACTTTAAGGCC...GAAGACAGCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAGGCCTTAAAGTCATCTaGCAGCAGCATCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRGLKVI*QQHHRG
Trigger: CCCCCGGTGATGCTGCTGCCAGATGACTTTAAGGCC...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGGACTCAAACTCTCCTaGGCCCAGGGGCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMGLKLS*AQGPMG
Trigger: TCCCATCGGCCCCTGGGCCCAGGAGAGTTTGAGTCC...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp AGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCGCATACTGCTCCGGATaGACAGTAGAGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SKAALHHHRPVADAQLYVAYCSG*TVEISA
Trigger: GGCAGAGATCTCTACTGTCCATCCGGAGCAGTATGC...GACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGGCCTACTCGACAGGATaGAGTTATCTGGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLAYSTG*SYLDGR
Trigger: CCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGC...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAGAAGAATGGGTGCCTTaGCCCCAGAGGCATTGTAGG +
Preference number: 4 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRREEWVP*PQRHCR
Trigger: CCTACAATGCCTCTGGGGCCAAGGCACCCATTCTTC...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCTATGCATGTCAGCAAACCGGGGGAGGCACCTaGCTGAGCTCATTGATCCAC +
Preference number: 4 (lower is better)
Translates to: GTSQCTGDSWRGCYACQQTGGGT*LSSLIH
Trigger: GTGGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGT...TTGCTGACATGCATAGCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR TCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGACTTCGTTGTCCACACTaGCTCGGTACATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRLRCPH*LGTSPG
Trigger: TCCTGGGGATGTACCGAGTCAGTGTGGACAACGAAG...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp CTCACTGGATACTTCTTTGATGACCAGAGTCCGATCGTAGGAGATAAGGAAGCGCTTCGTTGTCCACACTaGCTCGGTACATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LTGYFFDDQSPIVGDKEALRCPH*LGTSPG
Trigger: TCCTGGGGATGTACCGAGTCAGTGTGGACAACGAAG...CGCTTCCTTATCTCCTACGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR TCA 90 bp GAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACACACTAGGGAACCCTTaGGGTCATACTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: EDVIWGLQPLTGYSSCYHTLGNP*GHTSCA
Trigger: TGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT...GTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGACACTAGGGAACCCTTaGGGTCATACTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQTLGNP*GHTSCA
Trigger: TGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGGAAGGCTGTAGTCCATaGTCTTCAGCTGCACTAGAA +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLEGCSP*SSAALE
Trigger: TTCTAGTGCAGCTGAAGATCATGGACTACAGCCTTC...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp TCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTGCTTGTGGCCACACACCCACTaGAGGGTTCCAGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SDTFSSSHTAKCIQSSCLWPHTH*RVPVPG
Trigger: TCCTGGGACTGGAACCCTTCAGTGGGTGTGTGGCCA...CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAATTGAGTTATGGCTCTaGCTCCTCTCTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRIELWL*LLSGGG
Trigger: TCCACCCCCAGAGAGGAGTCAGAGCCATAACTCAAT...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTTTGGAGGGGCTGAGTaGTTGAGTTATGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: IQSKAALHHHRPVADAQLFGGAE*LSYGSD
Trigger: GTCAGAGCCATAACTCAATCACTCAGCCCCTCCAAA...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCTCATGGCTTCTTGTaGGACAGATCAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLPHGFL*DRSVQP
Trigger: TGGCTGGACTGATCTGTCTCACAAGAAGCCATGAGG...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAGGGGCAGAAGCGTGTTaGCATGGCACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRGAEAC*HGTSQC
Trigger: ACATTGTGAAGTGCCATGGCAACACGCTTCTGCCCC...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAGGGGCAGAAGCGTGTTaGCATGGCACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARGAEAC*HGTSQC
Trigger: ACATTGTGAAGTGCCATGGCAACACGCTTCTGCCCC...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLWMEGA*SLNLAK
Trigger: CTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCA...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGATCTCTGGGTTGCTGTaGCCAGATGTAGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRISGLL*PDVEMG
Trigger: ACCCATCTCTACATCTGGGCACAGCAACCCAGAGAT...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GTTGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTATCTCGCCGCCGATACCGTaGCTGGTGGGACCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VEKVHILKGGQFFNLFLISPPIP*LVGPRR
Trigger: CCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGA...GATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp GTAATCTTGGTCATCAATGCCAAATCGATCACGGAGGTTCCTGAAGACCTGGGGGCTTCTTCTTGGTCTTaGAGGCGAAGCCGAAACCTG +
Preference number: 4 (lower is better)
Translates to: VILVINAKSITEVPEDLGASSWS*RRSRNL
Trigger: CAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGC...CCCCAGGTCTTCAGGAACCTCCGTGATCGATTTGGCATTGATGACCAAGATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp GACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTTTCCGAAATGCTTCTTCTTaGTCTTGGAGGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: DQSPIVGDKEATITAFTFRNASS*SWRRSR
Trigger: TCGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCG...GAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp TCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTGCTTGACCGGGGGAGGCACCTaGCTGAGCTCATTGATCGAG +
Preference number: 4 (lower is better)
Translates to: SDTFSSSHTAKCIQSSCLTGGGT*LSSLIE
Trigger: CTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGT...CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCGGCCTTAAAGTCATCTaGCAGCAGCATCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVIGLKVI*QQHHRG
Trigger: CCCCCGGTGATGCTGCTGCCAGATGACTTTAAGGCC...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCTATGCATGTCAGCAAGGCCTTAAAGTCATCTaGCAGCAGCATCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: GTSQCTGDSWRGCYACQQGLKVI*QQHHRG
Trigger: CCCCCGGTGATGCTGCTGCCAGATGACTTTAAGGCC...TTGCTGACATGCATAGCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTAGCATACTGCTCCGGATaGACAGTAGAGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLAYCSG*TVEISA
Trigger: GGCAGAGATCTCTACTGTCCATCCGGAGCAGTATGC...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGGCCTACTCGACAGGATaGAGTTATCTGGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMAYSTG*SYLDGR
Trigger: CCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGC...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR CCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGCTCCCTATGGCCTCATaGCTTCTTGTGAGACAGATC +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQLPMAS*LLVRQI
Trigger: GATCTGTCTCACAAGAAGCCATGAGGCCATAGGGAG...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR TCA 90 bp CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTTCCCTGTGGAAAAGGTaGTTGTTGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LLTHSLPHLCRNGHIPSCSLWKR*LLTLIL
Trigger: CAAGATCAAGGTCAACAATCACCTTTTCCACAGGGA...ACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAACACTAGGGAACCCTTaGGGTCATACTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARTLGNP*GHTSCA
Trigger: TGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGGAAGGCTGTAGTCCATaGTCTTCAGCTGCACTAGAA +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQEGCSP*SSAALE
Trigger: TTCTAGTGCAGCTGAAGATCATGGACTACAGCCTTC...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGGAAGGCTGTAGTCCATaGTCTTCAGCTGCACTAGAA +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMEGCSP*SSAALE
Trigger: TTCTAGTGCAGCTGAAGATCATGGACTACAGCCTTC...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTGGCATAGACATCAATaGAGGACTCAAACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSWHRHQ*RTQTLL
Trigger: CAGGAGAGTTTGAGTCCTTCATTGATGTCTATGCCA...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAAGAACCCCACCACCTTaGACATCAGAGAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRRTPPP*TSERTR
Trigger: CCTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCT...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp TGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGACTTTACATGGAGAATaGATCCTACACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CYMGAPTPNWVLLLLPPLTLHGE*ILHPGP
Trigger: TGGGCCAGGGTGTAGGATTCATTCTCCATGTAAAGT...CAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACGGAAGTTCCCACACTTaGGGCCTCCATCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHGSSHT*GLHPLE
Trigger: TTCAAGAGGATGGAGGCCTCAAGTGTGGGAACTTCC...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACATTGAGTTATGGCTCTaGCTCCTCTCTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHIELWL*LLSGGG
Trigger: TCCACCCCCAGAGAGGAGTCAGAGCCATAACTCAAT...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CTCTTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAAGACCTGGGCCGGGGCCTaGTGTCGCCGCCGATACCGT +
Preference number: 4 (lower is better)
Translates to: LFTNIYFLVLVEKVHILKTWAGA*CRRRYR
Trigger: ACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGT...CTTAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR GCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAGGGGCAGAAGCGTGTTaGCATGGCACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRGAEAC*HGTSQC
Trigger: ACATTGTGAAGTGCCATGGCAACACGCTTCTGCCCC...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp TGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGGACAGTAGAGATCTCTaGCCCAGCCCCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: WCHRVLLHSSGEREMVGMDSRDL*PSPMLD
Trigger: GTCAAGCATGGGGCTGGGGCAGAGATCTCTACTGTC...CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGAATCGCTTAGCATACTaGTCCGGATGGACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQNRLAY*SGWTVE
Trigger: CTCTACTGTCCATCCGGAGCAGTATGCTAAGCGATT...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGTGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQWMEGA*SLNLAK
Trigger: CTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCA...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp AGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCTCCCACACAGCAAAGTaGATCCAGAGTAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SKAALHHHRPVADAQLYVSHTAK*IQSSCL
Trigger: CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGA...GACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCACCCAATCCAATTCTCTaGATAATCATGAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: WKPQGGWRIARRMGALAPPNPIL*IIMSPL
Trigger: AAGAGGACTCATGATTATGCAGAGAATTGGATTGGG...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGACGAAATGCTTCTTCTTaGTCTTGGAGGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARRNASS*SWRRSR
Trigger: TCGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCG...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCAGCTCATTGATCGAGTaGGCTACGCCCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVISSLIE*ATPHRN
Trigger: GTTCCTGTGGGGCGTAGCCCACTCGATCAATGAGCT...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGAGGTTCCTGAAGACCTaGGGACAATACTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMRFLKT*GQYSLN
Trigger: GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCT...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCTGTACTGGTGATAGTTaGAGAGGTTGCTATGCATGT +
Preference number: 4 (lower is better)
Translates to: KWKPQGGWRIARRMGALACTGDS*RGCYAC
Trigger: ACATGCATAGCAACCTCTCCAACTATCACCAGTACA...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAACCTTTTCCTTATCGCTaGCTTCCCGGGACACTAGGG +
Preference number: 4 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEPFPYR*LPGTLG
Trigger: CCCTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGG...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp ATGAAGACATCCATACTGCCCATAACACATCAGCCATATGATCAGAAAACCCATGCCTCCGATACCCTCTaGGGAGGTGCCATAGGAGCC +
Preference number: 4 (lower is better)
Translates to: MKTSILPITHQPYDQKTHASDTL*GGAIGA
Trigger: GGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGC...ATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGGACTCAAACTCTCCTaGGCCCAGGGGCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: SQSFIAFIGGKGDGWNEKGLKLS*AQGPMG
Trigger: TCCCATCGGCCCCTGGGCCCAGGAGAGTTTGAGTCC...TTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TGGAGAATGAATCCTACACCCTGGCCCATCATTCCAGCCTCCAAAACTGGCCACAAGGAAGAAGAGAACTaGTGGCTAGAATATCCCCAC +
Preference number: 4 (lower is better)
Translates to: WRMNPTPWPIIPASKTGHKEEEN*WLEYPH
Trigger: GTGGGGATATTCTAGCCACCAGTTCTCTTCTTCCTT...GTGGCCAGTTTTGGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCATTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR CCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGACAGGATGGAGTTATCTaGATGGAAGGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRQDGVI*MEGACS
Trigger: GCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTG...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACGCTTTTGGCCATCTCTaGGTTGCTGTGCCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHAFGHL*VAVPRC
Trigger: ACATCTGGGCACAGCAACCCAGAGATGGCCAAAAGC...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCGCTCCAACCCCTAACTaGGTACTCCTCTTGCTACCA +
Preference number: 4 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCAPTPN*VLLLLP
Trigger: TGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGC...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CCTAACTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGACAGGAAGATGTTATATaGGGGCTCCAACCCCTAACT +
Preference number: 4 (lower is better)
Translates to: PNWVLLLLPPLEQKMKGRQEDVI*GLQPLT
Trigger: AGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTG...TCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCAAAGAGCAATGGTTGCTaGTGTCACAGAGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: WKPQGGWRIARRMGALAPKSNGC*CHRVLL
Trigger: CAATAAAACTCTGTGACACCAGCAACCATTGCTCTT...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTTTCTCCCTGTGGAAAAGGTaGTTGTTGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: DQSPIVGDKEATITAFTFSLWKR*LLTLIL
Trigger: CAAGATCAAGGTCAACAATCACCTTTTCCACAGGGA...GAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR TCA 90 bp CTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGACACTAGGGAACCCTTaGGGTCATACTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LVKSSNSQTSSPRLECFWTLGNP*GHTSCA
Trigger: TGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT...CCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp CACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCATGTAGCTGTCTTCACACTAGGGAACCCTTaGGGTCATACTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: HRKTVAKHIAHHKHVAVFTLGNP*GHTSCA
Trigger: TGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT...GAAGACAGCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR TCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAGAAGGCTGTAGTCCATaGTCTTCAGCTGCACTAGAA +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVAREGCSP*SSAALE
Trigger: TTCTAGTGCAGCTGAAGATCATGGACTACAGCCTTC...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGGTTCAGAGCCCCGAATaGTGTCGTGGATGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMEVQSPE*CRGCLA
Trigger: TGCTAGGCATCCACGACATCATTCGGGGCTCTGAAC...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp TGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGTGGCATAGACATCAATaGAGGACTCAAACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CYMGAPTPNWVLLLLPPLWHRHQ*RTQTLL
Trigger: CAGGAGAGTTTGAGTCCTTCATTGATGTCTATGCCA...CAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp CTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATTCCAGAGTAGTTGCTTaGGCCAGGTCCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVSQSFIAFIGGKGDGWNSRVVA*ARSICP
Trigger: TGGACAGATGGACCTGGCTCAAGCAACTACTCTGGA...ATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGATATCTTTGGAGGGGCTaGGTGATTGAGTTATGGCTC +
Preference number: 4 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRYLWRG*VIELWL
Trigger: GAGCCATAACTCAATCACTCAGCCCCTCCAAAGATA...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp CTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATCCACAGGCCAGTTGCTaGTGCCCAGCTTTATGTCTA +
Preference number: 4 (lower is better)
Translates to: LVSQSFIAFIGGKGDGWNPQASC*CPALCL
Trigger: TAGACATAAAGCTGGGCATCAGCAACTGGCCTGTGG...ATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGGGGAGATGGTTGGAATaGAAAAGATCCATCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLGRWLE*KRSISL
Trigger: AAGACTGATGGATCTTTTTCATTCCAACCATCTCCC...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR TCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCAACAGAAGCAACAAATaGAGACATCCATACTGCCCA +
Preference number: 4 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSNRSNK*RHPYCP
Trigger: TGGGCAGTATGGATGTCTTCATTTGTTGCTTCTGTT...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGATCCATCAGTCTTCCTTCCCCTAGCTCCTTaGACATCAGAGAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: AFIGGKGDGWNEKDPSVFLPLAP*TSERTR
Trigger: CCTGGTTCTCTCTGATGTTCAAGGAGCTAGGGGAAG...GAAGACTGATGGATCTTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000540759.6
CDS-3UTR GCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGGACAGTAGAGATCTCTaGCCCAGCCCCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMEDSRDL*PSPMLD
Trigger: GTCAAGCATGGGGCTGGGGCAGAGATCTCTACTGTC...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGATGGATGGAAGGAGCCTaGAGCCTGAATTTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARWMEGA*SLNLAK
Trigger: CTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCA...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp CTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGTGCATCCAGAGTAGTTaGTTGAGCCAGGTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LVKSSNSQTSSPRLECFWCIQSS*LSQVHL
Trigger: CAGATGGACCTGGCTCAAGCAACTACTCTGGATGCA...CCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTATCCCACACAGCAAAGTaGATCCAGAGTAGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLSHTAK*IQSSCL
Trigger: CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGA...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGATCTCTGGGTTGCTGTaGCCAGATGTAGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: LVKSSNSQTSSPRLECFWISGLL*PDVEMG
Trigger: ACCCATCTCTACATCTGGGCACAGCAACCCAGAGAT...CCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAAAGAGCAAAGCAGCTTTaGATCACCACAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLERAKQL*ITTGQL
Trigger: CAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCGTCACAGAGTTTTATTaGATTCATCGGGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SKAALHHHRPVADAQLYVVTEFY*IHRGKG
Trigger: CCCTTTCCCCCGATGAATGCAATAAAACTCTGTGAC...GACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGCTTCTTCTTGGTCTTaGAGGCGAAGCCGAAACCTG +
Preference number: 4 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEASSWS*RRSRNL
Trigger: CAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGC...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCGCTTCTTCTTGGTCTTaGAGGCGAAGCCGAAACCTG +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVIASSWS*RRSRNL
Trigger: CAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGC...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp ATGAAGACATCCATACTGCCCATAACACATCAGCCATATGATCAGAAAACCCATACCGGGGGAGGCACCTaGCTGAGCTCATTGATCGAG +
Preference number: 4 (lower is better)
Translates to: MKTSILPITHQPYDQKTHTGGGT*LSSLIE
Trigger: CTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGT...ATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CTTTCTTCTGGAAATAAACCTTGGGGATGGCTAGGCAGGATGAAAGGAAACTTTGGCCTTAAAGTCATCTaGCAGCAGCATCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: LSSGNKPWGWLGRMKGNFGLKVI*QQHHRG
Trigger: CCCCCGGTGATGCTGCTGCCAGATGACTTTAAGGCC...AAAGTTTCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGAAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GTAATCTTGGTCATCAATGCCAAATCGATCACGGAGGTTCCTGAAGACCTGGGGAGGTTCCTGAAGACCTaGGGACAATACTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: VILVINAKSITEVPEDLGRFLKT*GQYSLN
Trigger: GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCT...CCCCAGGTCTTCAGGAACCTCCGTGATCGATTTGGCATTGATGACCAAGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp TGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACTGCACAGGAAGACGGTaGCTAAACATATTGCGCATC +
Preference number: 4 (lower is better)
Translates to: CETDQSSQIQSKAALHHHCTGRR*LNILRI
Trigger: GATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCA...GTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGCCTTTTCCTTATCGCTaGCTTCCCGGGACACTAGGG +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMEPFPYR*LPGTLG
Trigger: CCCTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGG...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGCATACTGCTCCGGATaGACAGTAGAGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEAYCSG*TVEISA
Trigger: GGCAGAGATCTCTACTGTCCATCCGGAGCAGTATGC...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGATCCATCAGTCTTCCAGGATGGAGTTATCTaGATGGAAGGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AFIGGKGDGWNEKDPSVFQDGVI*MEGACS
Trigger: GCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTG...GAAGACTGATGGATCTTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR CCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAGCCTACTCGACAGGATaGAGTTATCTGGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRAYSTG*SYLDGR
Trigger: CCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGC...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGATCCATCAGTCTTCATGAATCCTACACCCTaGCCCATCATTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AFIGGKGDGWNEKDPSVFMNPTP*PIIPAS
Trigger: GGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCAT...GAAGACTGATGGATCTTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GTTCTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTGCTCCAACCCCTAACTaGGTACTCCTCTTGCTACCA +
Preference number: 4 (lower is better)
Translates to: VLVKSSNSQTSSPRLECFAPTPN*VLLLLP
Trigger: TGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGC...AAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGATGGCATAGACATCAATaGAGGACTCAAACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARWHRHQ*RTQTLL
Trigger: CAGGAGAGTTTGAGTCCTTCATTGATGTCTATGCCA...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGAGAACCCCACCACCTTaGACATCAGAGAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMERTPPP*TSERTR
Trigger: CCTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCT...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR TCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAGGTGTGAGGTTCTGGTaGAGAGCAGCAATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRGVRFW*RAAIVK
Trigger: TTTGACTATTGCTGCTCTTCACCAGAACCTCACACC...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR TCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACACTTTACATGGAGAATaGATCCTACACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHTLHGE*ILHPGP
Trigger: TGGGCCAGGGTGTAGGATTCATTCTCCATGTAAAGT...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGGATCCATCAGTCTTCTaGCAGGAAGATGTTATATGG +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMDPSVF*QEDVIW
Trigger: CCATATAACATCTTCCTGTCAGAAGACTGATGGATC...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGGATCCATCAGTCTTCTaGCAGGAAGATGTTATATGG +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRDPSVF*QEDVIW
Trigger: CCATATAACATCTTCCTGTCAGAAGACTGATGGATC...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACAATCTTGGTCATCAATaGCAAATCGATCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: EDVIWGLQPLTGYSSCYHNLGHQ*QIDHGG
Trigger: ACCTCCGTGATCGATTTGGCATTGATGACCAAGATT...GTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp TGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACTTGGAGAGGTTGCTATaGATGTCAGCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CETDQSSQIQSKAALHHHLERLL*MSAMSS
Trigger: TGAGGACATTGCTGACATGCATAGCAACCTCTCCAA...GTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTATTGGAGAGGTTGCTATaGATGTCAGCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLLERLL*MSAMSS
Trigger: TGAGGACATTGCTGACATGCATAGCAACCTCTCCAA...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGGATAGTTGGAGAGGTTaGTATGCATGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQDSWRG*YACQQC
Trigger: ACATTGCTGACATGCATAGCAACCTCTCCAACTATC...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000550465.5
CDS-3UTR GCA 90 bp TCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTGCTTGGGGGCAGAAGCGTGTTaGCATGGCACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: SDTFSSSHTAKCIQSSCLGAEAC*HGTSQC
Trigger: ACATTGTGAAGTGCCATGGCAACACGCTTCTGCCCC...CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AATGTCCTCACTGGATACTTCTTTGATGACCAGAGTCCGATCGTAGGAGATAAGGGGGCAGAAGCGTGTTaGCATGGCACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: NVLTGYFFDDQSPIVGDKGAEAC*HGTSQC
Trigger: ACATTGTGAAGTGCCATGGCAACACGCTTCTGCCCC...CTTATCTCCTACGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGAGGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR GCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGTCCATGATCTTCAGCTaGACTAGAAACTCCACATCT +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRSMIFS*TRNSTS
Trigger: AGATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGA...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCCATGATCTTCAGCTaGACTAGAAACTCCACATCT +
Preference number: 4 (lower is better)
Translates to: RAKQLCITTGQLLMPSFMSMIFS*TRNSTS
Trigger: AGATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGA...CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTGGCTGCATGAGCTaGTTTCTTCTTAGCATCATA +
Preference number: 4 (lower is better)
Translates to: RYRAKQLCITTGQLLMPSFGCMS*FLLSII
Trigger: TATGATGCTAAGAAGAAAGCAGCTCATGCAGCCAAA...GCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CCTAACTGGGTACTCCTCTTGCTACCACCTTTGGAGCAGAAGATGAAGGGGAGACTTGACAGTTTTGGCTaGATGAGCTGCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PNWVLLLLPPLEQKMKGRLDSFG*MSCFLL
Trigger: AAGAAGAAAGCAGCTCATGCAGCCAAAACTGTCAAG...TCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTAGTCACAGAGTTTTATTaGATTCATCGGGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLVTEFY*IHRGKG
Trigger: CCCTTTCCCCCGATGAATGCAATAAAACTCTGTGAC...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGCTTCTTCTTGGTCTTaGAGGCGAAGCCGAAACCTG +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMASSWS*RRSRNL
Trigger: CAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGC...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GTTGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTATCACCGGGGGAGGCACCTaGCTGAGCTCATTGATCGAG +
Preference number: 4 (lower is better)
Translates to: VEKVHILKGGQFFNLFLITGGGT*LSSLIE
Trigger: CTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGT...GATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp CACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCATGTAGCTGTCTTCAGGTTCCTGAAGACCTaGGGACAATACTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HRKTVAKHIAHHKHVAVFRFLKT*GQYSLN
Trigger: GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCT...GAAGACAGCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGTGTACTGGTGATAGTTaGAGAGGTTGCTATGCATGT +
Preference number: 4 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQCTGDS*RGCYAC
Trigger: ACATGCATAGCAACCTCTCCAACTATCACCAGTACA...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000550465.5
CDS-3UTR CCA 90 bp GTCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGTGCACAGGAAGACGGTaGCTAAACATATTGCGCATC +
Preference number: 4 (lower is better)
Translates to: VILPVHRKTVAKHIAHHKCTGRR*LNILRI
Trigger: GATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCA...CTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGCAGGATGGAGTTATCTaGATGGAAGGAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMQDGVI*MEGACS
Trigger: GCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTG...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp AAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGAGCCTGCAGCCTGAAAGATCAAGGCACTTaGGAGAGAGTCAACAATAAC +
Preference number: 4 (lower is better)
Translates to: KEPTRQDGVIWMEGACSLKDQGT*ERVNNN
Trigger: GTTATTGTTGACTCTCTCCCAAGTGCCTTGATCTTT...CAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000422156.7
CDS-3UTR CCA 90 bp TCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTGCTTGATGAATCCTACACCCTaGCCCATCATTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SDTFSSSHTAKCIQSSCLMNPTP*PIIPAS
Trigger: GGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCAT...CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGTCTGGAAATAAACCTTaGGGATGGCTAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LVKSSNSQTSSPRLECFWSGNKP*GWLGRM
Trigger: CATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGA...CCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCAGGAAGATGTTATATaGGGGCTCCAACCCCTAACT +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHQEDVI*GLQPLT
Trigger: AGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTG...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTATTTCTAAAGAGCAATaGTTGCTGGTGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LLTHSLPHLCRNGHIPSCISKEQ*LLVSQS
Trigger: ACTCTGTGACACCAGCAACCATTGCTCTTTAGAAAT...ACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCTCCCTGTGGAAAAGGTaGTTGTTGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCSLWKR*LLTLIL
Trigger: CAAGATCAAGGTCAACAATCACCTTTTCCACAGGGA...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GTCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGTCCCTGTGGAAAAGGTaGTTGTTGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: VILPVHRKTVAKHIAHHKSLWKR*LLTLIL
Trigger: CAAGATCAAGGTCAACAATCACCTTTTCCACAGGGA...CTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR TCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGAACATCTGTAGTATCTTaGGTGTCATCCATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRTSVVS*VSSILG
Trigger: CCCTAGGATGGATGACACTCAAGATACTACAGATGT...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR TCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCACATCTGTAGTATCTTaGGTGTCATCCATCCTAGGG +
Preference number: 4 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCTSVVS*VSSILG
Trigger: CCCTAGGATGGATGACACTCAAGATACTACAGATGT...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGTTTGGAGGGGCTGAGTaGTTGAGTTATGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMFGGAE*LSYGSD
Trigger: GTCAGAGCCATAACTCAATCACTCAGCCCCTCCAAA...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR GCA 90 bp GTCATCAATGCCAAATCGATCACGGAGGTTCCTGAAGACCTGGGGACAATACTCGATAGTTGGAGAGGTTaGTATGCATGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: VINAKSITEVPEDLGTILDSWRG*YACQQC
Trigger: ACATTGCTGACATGCATAGCAACCTCTCCAACTATC...GAGTATTGTCCCCAGGTCTTCAGGAACCTCCGTGATCGATTTGGCATTGATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR GCA 90 bp GAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACACCAGGAGGGAAGCATaGCATAGTGAGTTTTATAAA +
Preference number: 4 (lower is better)
Translates to: EDVIWGLQPLTGYSSCYHTRREA*HSEFYK
Trigger: TTTATAAAACTCACTATGGCATGCTTCCCTCCTGGT...GTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTCCCAATCCAATTCTCTaGATAATCATGAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IQSKAALHHHRPVADAQLPNPIL*IIMSPL
Trigger: AAGAGGACTCATGATTATGCAGAGAATTGGATTGGG...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCTAAAGAGCAATGGTTaGTGGTGTCACAGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRLKSNG*WCHRVL
Trigger: TAAAACTCTGTGACACCAGCAACCATTGCTCTTTAG...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp TGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGCTAAAGAGCAATGGTTaGTGGTGTCACAGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: CYMGAPTPNWVLLLLPPLLKSNG*WCHRVL
Trigger: TAAAACTCTGTGACACCAGCAACCATTGCTCTTTAG...CAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGCGAAATGCTTCTTCTTaGTCTTGGAGGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMERNASS*SWRRSR
Trigger: TCGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCG...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTATCGCTAGCTCATTGATCGAGTaGGCTACGCCCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: EKVHILKGGQFFNLFLIASSLIE*ATPHRN
Trigger: GTTCCTGTGGGGCGTAGCCCACTCGATCAATGAGCT...AGCGATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAATGCACAGGAAGACGGTaGCTAAACATATTGCGCATC +
Preference number: 4 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMECTGRR*LNILRI
Trigger: GATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCA...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GTTCTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGCACAGGAAGACGGTaGCTAAACATATTGCGCATC +
Preference number: 4 (lower is better)
Translates to: VLVKSSNSQTSSPRLECFCTGRR*LNILRI
Trigger: GATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCA...AAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGATCCATCAGTCTTCTCTGGAAATAAACCTTaGGGATGGCTAGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AFIGGKGDGWNEKDPSVFSGNKP*GWLGRM
Trigger: CATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGA...GAAGACTGATGGATCTTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAAGGTTCCTGAAGACCTaGGGACAATACTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMERFLKT*GQYSLI
Trigger: GATCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCT...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550465.5
CDS-3UTR TCA 90 bp TGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTACCACCTTTGAGATTACTCAATCTATaGCAGAGACCCAATCCAATT +
Preference number: 4 (lower is better)
Translates to: CYMGAPTPNWVLLLLPPLRLLNL*QRPNPI
Trigger: AATTGGATTGGGTCTCTGTCATAGATTGAGTAATCT...CAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp ACAGGAAGATGTTATATGGGGGCTCCAACCCCTAACTGGGTACTCCTCTTGCTATCCATCCTCTTGAAATaGCCAGAATTGATCCAAGTA +
Preference number: 4 (lower is better)
Translates to: TGRCYMGAPTPNWVLLLLSILLK*PELIQV
Trigger: TACTTGGATCAATTCTGGTCATTTCAAGAGGATGGA...TAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAAGGGAGATGGTTGGAATaGAAAAGATCCATCAGTCTT +
Preference number: 4 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLEGRWLE*KRSISL
Trigger: AAGACTGATGGATCTTTTTCATTCCAACCATCTCCC...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GTCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGGATAGTTGGAGAGGTTaGTATGCATGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: VILPVHRKTVAKHIAHHKDSWRG*YACQQC
Trigger: ACATTGCTGACATGCATAGCAACCTCTCCAACTATC...CTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR GCA 90 bp ATGATCAGAAAACCCATTTCTAAAGAGCAATGGTTGCTGGTGTCACAGAGTTTTGACAGTAGAGATCTCTaGCCCAGCCCCATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: MIRKPISKEQWLLVSQSFDSRDL*PSPMLD
Trigger: GTCAAGCATGGGGCTGGGGCAGAGATCTCTACTGTC...AAAACTCTGTGACACCAGCAACCATTGCTCTTTAGAAATGGGTTTTCTGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGAATCGCTTAGCATACTaGTCCGGATGGACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMNRLAY*SGWTVE
Trigger: CTCTACTGTCCATCCGGAGCAGTATGCTAAGCGATT...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGAATCGCTTAGCATACTaGTCCGGATGGACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMENRLAY*SGWTVE
Trigger: CTCTACTGTCCATCCGGAGCAGTATGCTAAGCGATT...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp CTTTCTTCTGGAAATAAACCTTGGGGATGGCTAGGCAGGATGAAAGGAAACTTTCGAAATGCTTCTTCTTaGTCTTGGAGGCGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: LSSGNKPWGWLGRMKGNFRNASS*SWRRSR
Trigger: TCGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCG...AAAGTTTCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGAGGTTCCTGAAGACCTaGGGACAATACTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMRFLKT*GQYSLN
Trigger: GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCT...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000422156.7
CDS-3UTR CCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTGCACAGGAAGACGGTaGCTAAACATATTGCGCATC +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMECTGRR*LNILRI
Trigger: GATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCA...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp GTTGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTATCCCTTTTCCTTATCGCTaGCTTCCCGGGACACTAGGG +
Preference number: 4 (lower is better)
Translates to: VEKVHILKGGQFFNLFLIPFPYR*LPGTLG
Trigger: CCCTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGG...GATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp CTTTCTTCTGGAAATAAACCTTGGGGATGGCTAGGCAGGATGAAAGGAAACTTTCTCCCTATGGCCTCATaGCTTCTTGTGAGACAGATC +
Preference number: 4 (lower is better)
Translates to: LSSGNKPWGWLGRMKGNFLPMAS*LLVRQI
Trigger: GATCTGTCTCACAAGAAGCCATGAGGCCATAGGGAG...AAAGTTTCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAATTTCTAAAGAGCAATaGTTGCTGGTGTCACAGAGT +
Preference number: 4 (lower is better)
Translates to: GRSLQPEFSKGRRELVARISKEQ*LLVSQS
Trigger: ACTCTGTGACACCAGCAACCATTGCTCTTTAGAAAT...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354947.10
3UTR CAA 72 bp CTAAAGAGCAATGGTTGCTGGTGTCACAGAGTTTTATaGCATTCATCGGGGGAAAGGGAGATGGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LKSNGCWCHRVL*HSSGEREMVGM
Trigger: CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGCAACCATTGCTCTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTCCCTGTGGAAAAGGTaGTTGTTGACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMESLWKR*LLTLIL
Trigger: CAAGATCAAGGTCAACAATCACCTTTTCCACAGGGA...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000422156.7
CDS-3UTR TCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACTCCATCCTCTTGAAATaGCCAGAATTGATCCAAGTA +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHSILLK*PELIQV
Trigger: TACTTGGATCAATTCTGGTCATTTCAAGAGGATGGA...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp GTTCTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTAACAGAAGCAACAAATaGAGACATCCATACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VLVKSSNSQTSSPRLECFNRSNK*RHPYCP
Trigger: TGGGCAGTATGGATGTCTTCATTTGTTGCTTCTGTT...AAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGATCCATCAGTCTTCAATCTTGGTCATCAATaGCAAATCGATCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: AFIGGKGDGWNEKDPSVFNLGHQ*QIDHGG
Trigger: ACCTCCGTGATCGATTTGGCATTGATGACCAAGATT...GAAGACTGATGGATCTTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCTATGCATGTCAGCAAAATCTTGGTCATCAATaGCAAATCGATCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: GTSQCTGDSWRGCYACQQNLGHQ*QIDHGG
Trigger: ACCTCCGTGATCGATTTGGCATTGATGACCAAGATT...TTGCTGACATGCATAGCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGTTGGAGAGGTTGCTATaGATGTCAGCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMLERLL*MSAMSS
Trigger: TGAGGACATTGCTGACATGCATAGCAACCTCTCCAA...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000550465.5
CDS-3UTR GCA 90 bp GCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGATCCATCAGTCTTCGATAGTTGGAGAGGTTaGTATGCATGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: AFIGGKGDGWNEKDPSVFDSWRG*YACQQC
Trigger: ACATTGCTGACATGCATAGCAACCTCTCCAACTATC...GAAGACTGATGGATCTTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GTTGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTATCGGGGCAGAAGCGTGTTaGCATGGCACTTCACAATGT +
Preference number: 4 (lower is better)
Translates to: VEKVHILKGGQFFNLFLIGAEAC*HGTSQC
Trigger: ACATTGTGAAGTGCCATGGCAACACGCTTCTGCCCC...GATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR GCA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTCCATGATCTTCAGCTaGACTAGAAACTCCACATCT +
Preference number: 4 (lower is better)
Translates to: GQCISEGQKEPTRQDGVISMIFS*TRNSTS
Trigger: AGATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGA...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACTTTGGCTGCATGAGCTaGTTTCTTCTTAGCATCATA +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHFGCMS*FLLSII
Trigger: TATGATGCTAAGAAGAAAGCAGCTCATGCAGCCAAA...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGATTTGGCTGCATGAGCTaGTTTCTTCTTAGCATCATA +
Preference number: 4 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRFGCMS*FLLSII
Trigger: TATGATGCTAAGAAGAAAGCAGCTCATGCAGCCAAA...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp TGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGCTTGACAGTTTTGGCTaGATGAGCTGCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WCHRVLLHSSGEREMVGMLDSFG*MSCFLL
Trigger: AAGAAGAAAGCAGCTCATGCAGCCAAAACTGTCAAG...CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AAAATTCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTAGCAAGAAGAATGGGTaGCTTGGCCCCAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: KIQTLLVHPTQQSASRVVSKKNG*LGPRGI
Trigger: AATGCCTCTGGGGCCAAGGCACCCATTCTTCTTGCT...AACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp ATGAAGACATCCATACTGCCCATAACACATCAGCCATATGATCAGAAAACCCATAGAGCAAAGCAGCTTTaGATCACCACAGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: MKTSILPITHQPYDQKTHRAKQL*ITTGQL
Trigger: CAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCT...ATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp ATGAAGACATCCATACTGCCCATAACACATCAGCCATATGATCAGAAAACCCATACTGGGTACTCCTCTTaGTACCACCTTTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: MKTSILPITHQPYDQKTHTGYSS*YHLWSR
Trigger: TCTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGT...ATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp GTTCTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGTACTGGTGATAGTTaGAGAGGTTGCTATGCATGT +
Preference number: 4 (lower is better)
Translates to: VLVKSSNSQTSSPRLECFCTGDS*RGCYAC
Trigger: ACATGCATAGCAACCTCTCCAACTATCACCAGTACA...AAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGAAGGAAGAAGAGAACTaGTGGCTAGAATATCCCCAC +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMEKEEEN*WLEYPH
Trigger: GTGGGGATATTCTAGCCACCAGTTCTCTTCTTCCTT...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGAAGGAAGAAGAGAACTaGTGGCTAGAATATCCCCAC +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMKEEEN*WLEYPH
Trigger: GTGGGGATATTCTAGCCACCAGTTCTCTTCTTCCTT...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp TCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTGCTTGAATAAACCTTGGGGATaGCTAGGCAGGATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SDTFSSSHTAKCIQSSCLNKPWG*LGRMKG
Trigger: TCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATT...CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACAAGAGCAATGGTTGCTaGTGTCACAGAGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: SCETDQSSQIQSKAALHHKSNGC*CHRVLL
Trigger: CAATAAAACTCTGTGACACCAGCAACCATTGCTCTT...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TGTTGCTGCCTCTTTCTCTTCACAGCCAACCTTCTCAGGAAAGTAATCAGCAAGATCACTGGTGATAGTTaGAGAGGTTGCTATGCATGT +
Preference number: 4 (lower is better)
Translates to: CCCLFLFTANLLRKVISKITGDS*RGCYAC
Trigger: ACATGCATAGCAACCTCTCCAACTATCACCAGTGAT...CTTGCTGATTACTTTCCTGAGAAGGTTGGCTGTGAAGAGAAAGAGGCAGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR TCA 90 bp TTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAAGGGTCTTCGTTGTCCACACTaGCTCGGTACATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FTNIYFLVLVEKVHILKGLRCPH*LGTSPG
Trigger: TCCTGGGGATGTACCGAGTCAGTGTGGACAACGAAG...ACCCTTAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR TCA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCGGGTTCTCAACATTATaGGATTATCACACATCAACT +
Preference number: 4 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCGFSTL*DYHTST
Trigger: AGTTGATGTGTGATAATCTCATAATGTTGAGAACCC...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGAATCTTGGTCATCAATaGCAAATCGATCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMNLGHQ*QIDHGG
Trigger: ACCTCCGTGATCGATTTGGCATTGATGACCAAGATT...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGAATCTTGGTCATCAATaGCAAATCGATCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMENLGHQ*QIDHGG
Trigger: ACCTCCGTGATCGATTTGGCATTGATGACCAAGATT...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp ATTTTCCCTGTGGAAAAGGTGATTGTTGACCTTGATCTTGGAGCTGGCCTTAAATTGGAGAGGTTGCTATaGATGTCAGCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: IFPVEKVIVDLDLGAGLKLERLL*MSAMSS
Trigger: TGAGGACATTGCTGACATGCATAGCAACCTCTCCAA...TTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGATAGTTGGAGAGGTTaGTATGCATGTCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMDSWRG*YACQQC
Trigger: ACATTGCTGACATGCATAGCAACCTCTCCAACTATC...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000550465.5
CDS-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGTCCATGATCTTCAGCTaGACTAGAAACTCCACATCT +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMSMIFS*TRNSTS
Trigger: AGATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGA...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGCTTGACAGTTTTGGCTaGATGAGCTGCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMLDSFG*MSCFLL
Trigger: AAGAAGAAAGCAGCTCATGCAGCCAAAACTGTCAAG...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR GCA 90 bp TCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAAATCGCTTAGCATACTaGTCCGGATGGACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SQSFIAFIGGKGDGWNEKNRLAY*SGWTVE
Trigger: CTCTACTGTCCATCCGGAGCAGTATGCTAAGCGATT...TTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGATCCATCAGTCTTCACCAGGAGGGAAGCATaGCATAGTGAGTTTTATAAA +
Preference number: 4 (lower is better)
Translates to: AFIGGKGDGWNEKDPSVFTRREA*HSEFYK
Trigger: TTTATAAAACTCACTATGGCATGCTTCCCTCCTGGT...GAAGACTGATGGATCTTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp AATGTCCTCACTGGATACTTCTTTGATGACCAGAGTCCGATCGTAGGAGATAAGTGTACTGGTGATAGTTaGAGAGGTTGCTATGCATGT +
Preference number: 4 (lower is better)
Translates to: NVLTGYFFDDQSPIVGDKCTGDS*RGCYAC
Trigger: ACATGCATAGCAACCTCTCCAACTATCACCAGTACA...CTTATCTCCTACGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGAGGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CCA 90 bp GTTCTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTAAAGATCAAGGCACTTaGGAGAGAGTCAACAATAAC +
Preference number: 4 (lower is better)
Translates to: VLVKSSNSQTSSPRLECFKDQGT*ERVNNN
Trigger: GTTATTGTTGACTCTCTCCCAAGTGCCTTGATCTTT...AAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR TCA 90 bp AAAATTCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTTATCTTTGGAGGGGCTaGGTGATTGAGTTATGGCTC +
Preference number: 4 (lower is better)
Translates to: KIQTLLVHPTQQSASRVVYLWRG*VIELWL
Trigger: GAGCCATAACTCAATCACTCAGCCCCTCCAAAGATA...AACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp TGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAACACATCAGCCATATaGTCAGAAAACCCATTTCTA +
Preference number: 4 (lower is better)
Translates to: WCHRVLLHSSGEREMVGMNTSAI*SENPFL
Trigger: TAGAAATGGGTTTTCTGATCATATGGCTGATGTGTT...CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp GAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTATCGCTTTGGAGAGGTTGCTATaGATGTCAGCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EKVHILKGGQFFNLFLIALERLL*MSAMSS
Trigger: TGAGGACATTGCTGACATGCATAGCAACCTCTCCAA...AGCGATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR GCA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGTTTGGCTGCATGAGCTaGTTTCTTCTTAGCATCATA +
Preference number: 4 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMFGCMS*FLLSII
Trigger: TATGATGCTAAGAAGAAAGCAGCTCATGCAGCCAAA...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CCA 90 bp TCCTCTTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAGCTTCTTCTTGGTCTTaGAGGCGAAGCCGAAACCTG +
Preference number: 4 (lower is better)
Translates to: SSSPIYTFWFLLRKSISLASSWS*RRSRNL
Trigger: CAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGC...TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CCA 90 bp ATGATCAGAAAACCCATTTCTAAAGAGCAATGGTTGCTGGTGTCACAGAGTTTTAGGTTCCTGAAGACCTaGGGACAATACTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: MIRKPISKEQWLLVSQSFRFLKT*GQYSLN
Trigger: GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCT...AAAACTCTGTGACACCAGCAACCATTGCTCTTTAGAAATGGGTTTTCTGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CCA 90 bp TCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAAATAAACCTTGGGGATaGCTAGGCAGGATGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SQSFIAFIGGKGDGWNEKNKPWG*LGRMKG
Trigger: TCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATT...TTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR TCA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGAGATTACTCAATCTATaGCAGAGACCCAATCCAATT +
Preference number: 4 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMERLLNL*QRPNPI
Trigger: AATTGGATTGGGTCTCTGTCATAGATTGAGTAATCT...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR TCA 90 bp TCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTGCTTGGGGTTCTCAACATTATaGGATTATCACACATCAACT +
Preference number: 4 (lower is better)
Translates to: SDTFSSSHTAKCIQSSCLGFSTL*DYHTST
Trigger: AGTTGATGTGTGATAATCTCATAATGTTGAGAACCC...CAAGCAACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR GCA 90 bp CTTGTTGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTTTCCTTAATCTTGGTCATCAATaGCAAATCGATCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: LVEKVHILKGGQFFNLFLNLGHQ*QIDHGG
Trigger: ACCTCCGTGATCGATTTGGCATTGATGACCAAGATT...AAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
3UTR CAA 72 bp TTCTTCTCCTCTTCACCAATATATACTTTCTGGTTCTaGTTGAGAAAGTCCATATCCTTAAGGGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: FFSSSPIYTFWF*LRKSISLRVGN
Trigger: ATTGCCCACCCTTAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAGGAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR TCA 90 bp AAAATTCAGACACTTTTAGTTCATCCCACACAGCAAAGTGCATCCAGAGTAGTTAACACATCAGCCATATaGTCAGAAAACCCATTTCTA +
Preference number: 4 (lower is better)
Translates to: KIQTLLVHPTQQSASRVVNTSAI*SENPFL
Trigger: TAGAAATGGGTTTTCTGATCATATGGCTGATGTGTT...AACTACTCTGGATGCACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS CCA 90 bp GCCGAAACCTGGGCCGGGGCCTGCTGTCGCCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGCCATAGTCTCCCGCGCAACCGACCA +
Preference number: 5 (lower is better)
Translates to: AETWAGACCRRRYRG*WDRGGRHSLPRNRP
Trigger: TGGTCGGTTGCGCGGGAGACTATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550095.5
ENST00000550360.1
ENST00000550465.5
ENST00000551772.5
CDS CCA 90 bp GAAACCTGGGCCGGGGCCTGCTGTCGCCGCCGATACCGTGGCTGGTaGGACCGAGGAGGACGCCATAGTCTCCCGCGCAACCGACCAAGT +
Preference number: 5 (lower is better)
Translates to: ETWAGACCRRRYRGW*DRGGRHSLPRNRPS
Trigger: ACTTGGTCGGTTGCGCGGGAGACTATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550095.5
ENST00000550360.1
ENST00000550465.5
ENST00000551772.5
CDS GCA 90 bp CTTCTTCTTGGTCTTGGAGGCGAAGCCGAAACCTGGGCCGGGGCCTaGTGTCGCCGCCGATACCGTGGCTGGTGGGACCGAGGAGGACGC +
Preference number: 5 (lower is better)
Translates to: LLLGLGGEAETWAGA*CRRRYRGWWDRGGR
Trigger: GCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550095.5
ENST00000550360.1
ENST00000550465.5
ENST00000551772.5
CDS GCA 90 bp GGGAGGTGCCATAGGAGCCCACCAGAGCAGGAGGTCCAGTCAGGCTaGAGTCCCCATCCACCTCTGACTCATCCTCCCGCACGGGCGCTT +
Preference number: 5 (lower is better)
Translates to: GRCHRSPPEQEVQSG*SPHPPLTHPPARAL
Trigger: AAGCGCCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTCCTGCTCTGGTGGGCTCCTATGGCACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550465.5
CDS TCA 90 bp CACCAGAGCAGGAGGTCCAGTCAGGCTGCAGTCCCCATCCACCTCTaGCTCATCCTCCCGCACGGGCGCTTCCTCCTCTGGTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: HQSRRSSQAAVPIHL*LILPHGRFLLWFRA
Trigger: GGCTCTGAACCAGAGGAGGAAGCGCCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTCCTGCTCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000548264.1
ENST00000550465.5
CDS CCA 90 bp TGGGCCCAGGGGCCGATGGGAATGGATGTAGCCTCCGATACCCTCTaGGGAGGTGCCATAGGAGCCCACCAGAGCAGGAGGTCCAGTCAG +
Preference number: 5 (lower is better)
Translates to: WAQGPMGMDVASDTL*GGAIGAHQSRRSSQ
Trigger: CTGACTGGACCTCCTGCTCTGGTGGGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGCTACATCCATTCCCATCGGCCCCTGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550465.5
CDS GCA 90 bp GGGGCCGATGGGAATGGATGTAGCCTCCGATACCCTCTGGGGAGGTaGCATAGGAGCCCACCAGAGCAGGAGGTCCAGTCAGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GADGNGCSLRYPLGR*HRSPPEQEVQSGCS
Trigger: ACTGCAGCCTGACTGGACCTCCTGCTCTGGTGGGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGCTACATCCATTCCCATCGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550465.5
CDS-3UTR CAA 90 bp TGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCCCACAGAGCAAAGCAGCTTaGCATCACCACAGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: WKPQGGWRIARRMGALAPQSKAA*HHHRPV
Trigger: AACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTG...TGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTTGGGGCAGAAGCGTGTaGCCATGGCACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: LLTHSLPHLCRNGHIPSCWGRSV*PWHFTM
Trigger: CATTGTGAAGTGCCATGGCAACACGCTTCTGCCCCA...ACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGTGGGGCAGAAGCGTGTaGCCATGGCACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQWGRSV*PWHFTM
Trigger: CATTGTGAAGTGCCATGGCAACACGCTTCTGCCCCA...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp GATGACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTTGGGGCAGAAGCGTGTaGCCATGGCACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: DDQSPIVGDKEATITAFTWGRSV*PWHFTM
Trigger: CATTGTGAAGTGCCATGGCAACACGCTTCTGCCCCA...AGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CAA 90 bp CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTGACACTAGGGAACCCTaGAGGTCATACTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: LLTHSLPHLCRNGHIPSCDTREP*RSYFLC
Trigger: GCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGTC...ACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGTGCTTCTTCTTGGTCTaGGAGGCGAAGCCGAAACCT +
Preference number: 5 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQCFFLV*EAKPKP
Trigger: AGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGCA...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp AGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTATGTCTGCTTCTTCTTGGTCTaGGAGGCGAAGCCGAAACCT +
Preference number: 5 (lower is better)
Translates to: SKAALHHHRPVADAQLYVCFFLV*EAKPKP
Trigger: AGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGCA...GACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp GACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTTTCTGCTTCTTCTTGGTCTaGGAGGCGAAGCCGAAACCT +
Preference number: 5 (lower is better)
Translates to: DQSPIVGDKEATITAFTFCFFLV*EAKPKP
Trigger: AGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGCA...GAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CAA 90 bp GAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACCACAGGCAGAGCAAAGCAGCTTaGCATCACCACAGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: ETDQSSQIQSKAALHHHRQSKAA*HHHRPV
Trigger: AACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTG...CCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTAACTGGGTACTCCTCTaGCTACCACCTTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: IQSKAALHHHRPVADAQLNWVLL*LPPLEQ
Trigger: CTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTT...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp TCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCTGGGGCAGAAGCGTGTaGCCATGGCACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: SYFLCTGRRWLNILRITSWGRSV*PWHFTM
Trigger: CATTGTGAAGTGCCATGGCAACACGCTTCTGCCCCA...GCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAGACACTAGGGAACCCTaGAGGTCATACTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: GRSLQPEFSKGRRELVARDTREP*RSYFLC
Trigger: GCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGTC...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp AAGTGGAAGCCTCAAGGGGGATGGAGGATAGCAAGAAGAATGGGTGCCTTGGCCTGTCACAGAGTTTTATaGCATTCATCGGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: KWKPQGGWRIARRMGALACHRVL*HSSGER
Trigger: CCTTTCCCCCGATGAATGCAATAAAACTCTGTGACA...GGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp CAATTCCCCCAAGTGTCTCAGAACCCCACCACCTTGAACATCAGAGAGAACCAGTGGGGACAATACTCCTaGATCTTGGAGCTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: QFPQVSQNPTTLNIRENQWGQYS*ILELAL
Trigger: TAAGGCCAGCTCCAAGATCAAGGAGTATTGTCCCCA...CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550465.5
CDS-3UTR CAA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAAACGAAATGCTTCTTCTaGGTCTTGGAGGCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLETKCFF*VLEAKP
Trigger: CGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCGT...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp TGGAGAATGAATCCTACACCCTGGCCCATCATTCCAGCCTCCAAAACTGGCCACGGACACCAAGTAATCTaGGTCATCAATGCCAAATCG +
Preference number: 5 (lower is better)
Translates to: WRMNPTPWPIIPASKTGHGHQVI*VINAKS
Trigger: CGATTTGGCATTGATGACCAAGATTACTTGGTGTCC...GTGGCCAGTTTTGGAGGCTGGAATGATGGGCCAGGGTGTAGGATTCATTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp ATACAGAGCAAAGCAGCTTTGCATCACCACAGGCCAGTTGCTGATGCCCAGCTTTCACTGGATACTTCTTaGATGACCAGAGTCCGATCG +
Preference number: 5 (lower is better)
Translates to: IQSKAALHHHRPVADAQLSLDTS*MTRVRS
Trigger: CGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGA...AAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp GACCAGAGTCCGATCGTAGGAGATAAGGAAGCGACCATCACTGCCTTCACTTTCTCACTGGATACTTCTTaGATGACCAGAGTCCGATCG +
Preference number: 5 (lower is better)
Translates to: DQSPIVGDKEATITAFTFSLDTS*MTRVRS
Trigger: CGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGA...GAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CAA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAATGGGGCAGAAGCGTGTaGCCATGGCACTTCACAATG +
Preference number: 5 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEWGRSV*PWHFTM
Trigger: CATTGTGAAGTGCCATGGCAACACGCTTCTGCCCCA...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp GAAGAAGAGAACTGGTGGCTAGAATATCCCCACAATTCCCCCAAGTGTCTCAGACAGAACCCCACCACCTaGAACATCAGAGAGAACCAG +
Preference number: 5 (lower is better)
Translates to: EEENWWLEYPHNSPKCLRQNPTT*NIRENQ
Trigger: CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTG...TCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCACCAGTTCTCTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTCACATCTGTAGTATCTaGAGTGTCATCCATCCTAGG +
Preference number: 5 (lower is better)
Translates to: LLTHSLPHLCRNGHIPSCHICSI*SVIHPR
Trigger: CCTAGGATGGATGACACTCAAGATACTACAGATGTG...ACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp AATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGCCATCTCTGGGTTGCATCACCACAGGCCAGTaGCTGATGCCCAGCTTTATG +
Preference number: 5 (lower is better)
Translates to: NSQTSSPRLECFWPSLGCITTGQ*LMPSFM
Trigger: CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGAT...GCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp CTGCTGACCCACTCTCTACCCCACCTGTGTAGGAATGGCCATATTCCATCGTGTTGTCACAGAGTTTTATaGCATTCATCGGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LLTHSLPHLCRNGHIPSCCHRVL*HSSGER
Trigger: CCTTTCCCCCGATGAATGCAATAAAACTCTGTGACA...ACACGATGGAATATGGCCATTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp GCTGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAACCTTCCCCTAGCTCCTaGAACATCAGAGAGAACCAG +
Preference number: 5 (lower is better)
Translates to: AGVTEFYCIHRGKGRWLEPSPSS*NIRENQ
Trigger: CTGGTTCTCTCTGATGTTCAAGGAGCTAGGGGAAGG...TTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540759.6
CDS-3UTR CAA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAATGCTTCTTCTTGGTCTaGGAGGCGAAGCCGAAACCT +
Preference number: 5 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMECFFLV*EAKPKP
Trigger: AGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGCA...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCACGAAATGCTTCTTCTaGGTCTTGGAGGCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GQCISEGQKEPTRQDGVITKCFF*VLEAKP
Trigger: CGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCGT...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp GGCACTTCACAATGTACTGGTGATAGTTGGAGAGGTTGCTATGCATGTCAGCAAACGAAATGCTTCTTCTaGGTCTTGGAGGCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GTSQCTGDSWRGCYACQQTKCFF*VLEAKP
Trigger: CGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCGT...TTGCTGACATGCATAGCAACCTCTCCAACTATCACCAGTACATTGTGAAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CAA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGACACTAGGGAACCCTaGAGGTCATACTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEDTREP*RSYFLC
Trigger: GCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGTC...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp TGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGCAGAACCCCACCACCTaGAACATCAGAGAGAACCAG +
Preference number: 5 (lower is better)
Translates to: WCHRVLLHSSGEREMVGMQNPTT*NIRENQ
Trigger: CTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTG...CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354947.10
CDS-3UTR CAA 90 bp GTTCTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTAACTGGGTACTCCTCTaGCTACCACCTTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VLVKSSNSQTSSPRLECFNWVLL*LPPLEQ
Trigger: CTGCTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTT...AAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGACGAAATGCTTCTTCTaGGTCTTGGAGGCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMETKCFF*VLEAKP
Trigger: CGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCGT...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGATTGTTGACCTTGATCTaGGAGCTGGCCTTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: GRSLQPEFSKGRRELVARLLTLI*ELALKS
Trigger: TGACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAA...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000422156.7
CDS-3UTR CAA 90 bp TCTTGTGAGACAGATCAGTCCAGCCAGATACAGAGCAAAGCAGCTTTGCATCACTTGTTGACCTTGATCTaGGAGCTGGCCTTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SCETDQSSQIQSKAALHHLLTLI*ELALKS
Trigger: TGACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAA...GTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTGTCTCACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp TCATACTTCCTGTGCACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCGGACACCAAGTAATCTaGGTCATCAATGCCAAATCG +
Preference number: 5 (lower is better)
Translates to: SYFLCTGRRWLNILRITSGHQVI*VINAKS
Trigger: CGATTTGGCATTGATGACCAAGATTACTTGGTGTCC...GCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp TGGTGTCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGTCACTGGATACTTCTTaGATGACCAGAGTCCGATCG +
Preference number: 5 (lower is better)
Translates to: WCHRVLLHSSGEREMVGMSLDTS*MTRVRS
Trigger: CGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGA...CATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp ATGAAGACATCCATACTGCCCATAACACATCAGCCATATGATCAGAAAACCCATACGAAATGCTTCTTCTaGGTCTTGGAGGCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: MKTSILPITHQPYDQKTHTKCFF*VLEAKP
Trigger: CGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCGT...ATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp GTTCTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTTGTTGACCTTGATCTaGGAGCTGGCCTTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: VLVKSSNSQTSSPRLECFLLTLI*ELALKS
Trigger: TGACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAA...AAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAAGGACACCAAGTAATCTaGGTCATCAATGCCAAATCG +
Preference number: 5 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEGHQVI*VINAKS
Trigger: CGATTTGGCATTGATGACCAAGATTACTTGGTGTCC...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000550465.5
CDS-3UTR CAA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTCACTGGATACTTCTTaGATGACCAGAGTCCGATCG +
Preference number: 5 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMESLDTS*MTRVRS
Trigger: CGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGA...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000550465.5
CDS-3UTR CAA 90 bp TCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAGACACTAGGGAACCCTaGAGGTCATACTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: SQSFIAFIGGKGDGWNEKDTREP*RSYFLC
Trigger: GCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGTC...TTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp TCACAGAGTTTTATTGCATTCATCGGGGGAAAGGGAGATGGTTGGAATGAAAAAATCACCACAGGCCAGTaGCTGATGCCCAGCTTTATG +
Preference number: 5 (lower is better)
Translates to: SQSFIAFIGGKGDGWNEKITTGQ*LMPSFM
Trigger: CATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGAT...TTTTTCATTCCAACCATCTCCCTTTCCCCCGATGAATGCAATAAAACTCTGTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCCAATACTCCTTGATCTaGGAGCTGGCCTTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: GQCISEGQKEPTRQDGVIQYSLI*ELALKS
Trigger: TGACTTTAAGGCCAGCTCCAAGATCAAGGAGTATTG...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550465.5
CDS-3UTR CAA 90 bp GAAGGCCATCTGTCCCCTAGGAGACACAGTTGCAGTATAAGACAGGACAGAAGAACTTTCTGGTTCTTGTaGAGAAAGTCCATATCCTTA +
Preference number: 5 (lower is better)
Translates to: EGHLSPRRHSCSIRQDRRTFWFL*RKSISL
Trigger: TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGT...TCTTCTGTCCTGTCTTATACTGCAACTGTGTCTCCTAGGGGACAGATGGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp GGAAGGAGCCTGCAGCCTGAATTTAGCAAAGGAAGAAGAGAACTGGTGGCTAGAAATGTACAAGTAATCTaGGTCATCAATGCCAAATCG +
Preference number: 5 (lower is better)
Translates to: GRSLQPEFSKGRRELVARNVQVI*VINAKS
Trigger: CGATTTGGCATTGATGACCAAGATTACTTGTACATT...TCTAGCCACCAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422156.7
CDS-3UTR CAA 90 bp ATTTTCCCTGTGGAAAAGGTGATTGTTGACCTTGATCTTGGAGCTGGCCTTAAATTGTTGACCTTGATCTaGGAGCTGGCCTTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: IFPVEKVIVDLDLGAGLKLLTLI*ELALKS
Trigger: TGACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAA...TTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CAA 90 bp ATTTTCCCTGTGGAAAAGGTGATTGTTGACCTTGATCTTGGAGCTGGCCTTAAAGGACACCAAGTAATCTaGGTCATCAATGCCAAATCG +
Preference number: 5 (lower is better)
Translates to: IFPVEKVIVDLDLGAGLKGHQVI*VINAKS
Trigger: CGATTTGGCATTGATGACCAAGATTACTTGGTGTCC...TTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550360.1
CDS-3UTR CAA 90 bp CACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCATGTAGCTGTCTTCACTTTCTGGTTCTTGTaGAGAAAGTCCATATCCTTA +
Preference number: 5 (lower is better)
Translates to: HRKTVAKHIAHHKHVAVFTFWFL*RKSISL
Trigger: TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGT...GAAGACAGCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp CTGGTGAAGAGCAGCAATAGTCAAACATCTTCCCCCAGGCTTGAATGCTTTTGGTATACTTTCTGGTTCTaGTTGAGAAAGTCCATATCC +
Preference number: 5 (lower is better)
Translates to: LVKSSNSQTSSPRLECFWYTFWF*LRKSIS
Trigger: GGATATGGACTTTCTCAACAAGAACCAGAAAGTATA...CCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp CACAGGAAGACGGTGGCTAAACATATTGCGCATCACAAGCATGTAGCTGTCTTCTATACTTTCTGGTTCTaGTTGAGAAAGTCCATATCC +
Preference number: 5 (lower is better)
Translates to: HRKTVAKHIAHHKHVAVFYTFWF*LRKSIS
Trigger: GGATATGGACTTTCTCAACAAGAACCAGAAAGTATA...GAAGACAGCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp CTCTTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAAGTGCTTCTTCTTGGTCTaGGAGGCGAAGCCGAAACCT +
Preference number: 5 (lower is better)
Translates to: LFTNIYFLVLVEKVHILKCFFLV*EAKPKP
Trigger: AGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGCA...CTTAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp TCCTCTTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAACGAAATGCTTCTTCTaGGTCTTGGAGGCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: SSSPIYTFWFLLRKSISLTKCFF*VLEAKP
Trigger: CGGCTTCGCCTCCAAGACCAAGAAGAAGCATTTCGT...TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp ATGAAGACATCCATACTGCCCATAACACATCAGCCATATGATCAGAAAACCCATGGACACCAAGTAATCTaGGTCATCAATGCCAAATCG +
Preference number: 5 (lower is better)
Translates to: MKTSILPITHQPYDQKTHGHQVI*VINAKS
Trigger: CGATTTGGCATTGATGACCAAGATTACTTGGTGTCC...ATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp TCCTCTTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAGACACTAGGGAACCCTaGAGGTCATACTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: SSSPIYTFWFLLRKSISLDTREP*RSYFLC
Trigger: GCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGTC...TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp ATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTGGATGGAATATACTTTCTGGTTCTaGTTGAGAAAGTCCATATCC +
Preference number: 5 (lower is better)
Translates to: ISEGQKEPTRQDGVIWMEYTFWF*LRKSIS
Trigger: GGATATGGACTTTCTCAACAAGAACCAGAAAGTATA...TTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp GGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGTTATCTATACTTTCTGGTTCTaGTTGAGAAAGTCCATATCC +
Preference number: 5 (lower is better)
Translates to: GQCISEGQKEPTRQDGVIYTFWF*LRKSIS
Trigger: GGATATGGACTTTCTCAACAAGAACCAGAAAGTATA...GATAACTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp AGGAAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGACTTTCTGGTTCTTGTaGAGAAAGTCCATATCCTTA +
Preference number: 5 (lower is better)
Translates to: RKKDNVFLRVRKSLLDRMTFWFL*RKSISL
Trigger: TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGT...CATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp AAAAAGGACAATGTATTTCTGAGGGTCAGAAAGAGCCTACTCGACAGGATGGAGACTTTCTGGTTCTTGTaGAGAAAGTCCATATCCTTA +
Preference number: 5 (lower is better)
Translates to: KKDNVFLRVRKSLLDRMETFWFL*RKSISL
Trigger: TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGT...CTCCATCCTGTCGAGTAGGCTCTTTCTGACCCTCAGAAATACATTGTCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000550465.5
CDS-3UTR CAA 90 bp ATGATCAGAAAACCCATTTCTAAAGAGCAATGGTTGCTGGTGTCACAGAGTTTTCACATCTGTAGTATCTaGAGTGTCATCCATCCTAGG +
Preference number: 5 (lower is better)
Translates to: MIRKPISKEQWLLVSQSFHICSI*SVIHPR
Trigger: CCTAGGATGGATGACACTCAAGATACTACAGATGTG...AAAACTCTGTGACACCAGCAACCATTGCTCTTTAGAAATGGGTTTTCTGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp TTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTAAGGGTTCACTGGATACTTCTTaGATGACCAGAGTCCGATCG +
Preference number: 5 (lower is better)
Translates to: FTNIYFLVLVEKVHILKGSLDTS*MTRVRS
Trigger: CGATCGGACTCTGGTCATCAAAGAAGTATCCAGTGA...ACCCTTAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp TCCTCTTCACCAATATATACTTTCTGGTTCTTGTTGAGAAAGTCCATATCCTTATTGTTGACCTTGATCTaGGAGCTGGCCTTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SSSPIYTFWFLLRKSISLLLTLI*ELALKS
Trigger: TGACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAA...TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550095.5
CDS-3UTR CAA 90 bp ATGAAGACATCCATACTGCCCATAACACATCAGCCATATGATCAGAAAACCCATACTTTCTGGTTCTTGTaGAGAAAGTCCATATCCTTA +
Preference number: 5 (lower is better)
Translates to: MKTSILPITHQPYDQKTHTFWFL*RKSISL
Trigger: TAAGGATATGGACTTTCTCAACAAGAACCAGAAAGT...ATGGGTTTTCTGATCATATGGCTGATGTGTTATGGGCAGTATGGATGTCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS-3UTR CAA 90 bp ATGATCAGAAAACCCATTTCTAAAGAGCAATGGTTGCTGGTGTCACAGAGTTTTTATACTTTCTGGTTCTaGTTGAGAAAGTCCATATCC +
Preference number: 5 (lower is better)
Translates to: MIRKPISKEQWLLVSQSFYTFWF*LRKSIS
Trigger: GGATATGGACTTTCTCAACAAGAACCAGAAAGTATA...AAAACTCTGTGACACCAGCAACCATTGCTCTTTAGAAATGGGTTTTCTGATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354947.10
ENST00000540759.6
CDS CCA 72 bp TGGGCCGGGGCCTGCTGTCGCCGCCGATACCGTGGCTaGTGGGACCGAGGAGGACGCCATAGTCTCCCGCGC +
Preference number: 6 (lower is better)
Translates to: WAGACCRRRYRG*WDRGGRHSLPR
Trigger: GCGCGGGAGACTATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550095.5
ENST00000550360.1
ENST00000550465.5
ENST00000551772.5
CDS CCA 72 bp GCCGGGGCCTGCTGTCGCCGCCGATACCGTGGCTGGTaGGACCGAGGAGGACGCCATAGTCTCCCGCGCAAC +
Preference number: 6 (lower is better)
Translates to: AGACCRRRYRGW*DRGGRHSLPRN
Trigger: GTTGCGCGGGAGACTATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550095.5
ENST00000550360.1
ENST00000550465.5
ENST00000551772.5
CDS GCA 72 bp GGTCTTGGAGGCGAAGCCGAAACCTGGGCCGGGGCCTaGTGTCGCCGCCGATACCGTGGCTGGTGGGACCGA +
Preference number: 6 (lower is better)
Translates to: GLGGEAETWAGA*CRRRYRGWWDR
Trigger: TCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCCTCCAAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550095.5
ENST00000550360.1
ENST00000550465.5
ENST00000551772.5
CDS CCA 72 bp ATGCTTCTTCTTGGTCTTGGAGGCGAAGCCGAAACCTaGGCCGGGGCCTGCTGTCGCCGCCGATACCGTGGC +
Preference number: 6 (lower is better)
Translates to: MLLLGLGGEAET*AGACCRRRYRG
Trigger: GCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCCTCCAAGACCAAGAAGAAGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550095.5
ENST00000550360.1
ENST00000550465.5
ENST00000551772.5
CDS CCA 72 bp GGGCCGATGGGAATGGATGTAGCCTCCGATACCCTCTaGGGAGGTGCCATAGGAGCCCACCAGAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: GPMGMDVASDTL*GGAIGAHQSRR
Trigger: CCTCCTGCTCTGGTGGGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGCTACATCCATTCCCATCGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550465.5
CDS GCA 72 bp CATAGGAGCCCACCAGAGCAGGAGGTCCAGTCAGGCTaGAGTCCCCATCCACCTCTGACTCATCCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: HRSPPEQEVQSG*SPHPPLTHPPA
Trigger: TGCGGGAGGATGAGTCAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTCCTGCTCTGGTGGGCTCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000548264.1
ENST00000550465.5
CDS TCA 72 bp GGGCTCCTTCAGCACTCCGGATGGCATAGACATCAATaGAGGACTCAAACTCTCCTGGGCCCAGGGGCCGAT +
Preference number: 6 (lower is better)
Translates to: GLLQHSGWHRHQ*RTQTLLGPGAD
Trigger: ATCGGCCCCTGGGCCCAGGAGAGTTTGAGTCCTTCATTGATGTCTATGCCATCCGGAGTGCTGAAGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354947.10
ENST00000422156.7
ENST00000540759.6
ENST00000550465.5
CDS CAA 90 bp AATATTTTCTTCTCCTCTTCACCAATATATACTTTCTGGTTCTTGTaGAGAAAGTCCATATCCTTAAGGGTGGGCAATTCTTTAACCTTG +
Preference number: 6 (lower is better)
Translates to: NIFFSSSPIYTFWFL*RKSISLRVGNSLTL
Trigger: CAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAACAAGAACCAGAAAGTATATATTGGTGAAGAGGAGAAGAAAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548264.1