Pregenerated sensors for PIP (Homo sapiens)

Ensembl gene IDs: ENSG00000159763

Ensembl transcript IDs: ENST00000291009.4

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCACCATGCATTCTTTCAATTCTGTTTGAACTGCAAGCACTGCAGTaGCTTCGTCATTTGGACGTACTGACTTGGGAATGTCAAAATTCT	+
Preference number: 5 (lower is better) Translates to: PPCILSILFELQALQ*LRHLDVLTWECQNS Trigger: AGAATTTTGACATTCCCAAGTCAGTACGTCCAAATGACGAAGTCACTGCAGTGCTTGCAGTTCAAACAGAATTGAAAGAATGCATGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS CCA 90 bp	AGCAGAAATTCCAGCCAAGTTTCTTTAGAGGAAATCACCTGGGTGTaGCAAACAGACAGGGCTTCCATTATTCTACCTTTAGGATTTCAA	+
Preference number: 5 (lower is better) Translates to: SRNSSQVSLEEITWV*QTDRASIILPLGFQ Trigger: TTGAAATCCTAAAGGTAGAATAATGGAAGCCCTGTCTGTTTGCCACACCCAGGTGATTTCCTCTAAAGAAACTTGGCTGGAATTTCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS TCA 90 bp	TGTTTGAACTGCAAGCACTGCAGTGACTTCGTCATTTGGACGTACTaGCTTGGGAATGTCAAAATTCTTTATTATGATCTTCCGAGTGTT	+
Preference number: 5 (lower is better) Translates to: CLNCKHCSDFVIWTY*LGNVKILYYDLPSV Trigger: AACACTCGGAAGATCATAATAAAGAATTTTGACATTCCCAAGTCAGTACGTCCAAATGACGAAGTCACTGCAGTGCTTGCAGTTCAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS TCA 72 bp	ATTCTTTCAATTCTGTTTGAACTGCAAGCACTGCAGTaGCTTCGTCATTTGGACGTACTGACTTGGGAATGT	+
Preference number: 6 (lower is better) Translates to: ILSILFELQALQ*LRHLDVLTWEC Trigger: ACATTCCCAAGTCAGTACGTCCAAATGACGAAGTCACTGCAGTGCTTGCAGTTCAAACAGAATTGAAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS GCA 72 bp	TTTAACCACCATGCATTCTTTCAATTCTGTTTGAACTaGAAGCACTGCAGTGACTTCGTCATTTGGACGTAC	+
Preference number: 6 (lower is better) Translates to: FNHHAFFQFCLN*KHCSDFVIWTY Trigger: GTACGTCCAAATGACGAAGTCACTGCAGTGCTTGCAGTTCAAACAGAATTGAAAGAATGCATGGTGGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS CAA 72 bp	CAGTTCTGTTGGTGTAAAAGTCCCAGTAGAAGGTTTTaGGATTGTCGTCACATAGGCAGGCAGTATACTTAT	+
Preference number: 6 (lower is better) Translates to: QFCWCKSPSRRF*DCRHIGRQYTY Trigger: ATAAGTATACTGCCTGCCTATGTGACGACAATCCAAAAACCTTCTACTGGGACTTTTACACCAACAGAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS CAA 72 bp	AGCACTGCAGTGACTTCGTCATTTGGACGTACTGACTaGGGAATGTCAAAATTCTTTATTATGATCTTCCGA	+
Preference number: 6 (lower is better) Translates to: STAVTSSFGRTD*GMSKFFIMIFR Trigger: TCGGAAGATCATAATAAAGAATTTTGACATTCCCAAGTCAGTACGTCCAAATGACGAAGTCACTGCAGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS CAA 72 bp	GTAAGTTTTAACCACCATGCATTCTTTCAATTCTGTTaGAACTGCAAGCACTGCAGTGACTTCGTCATTTGG	+
Preference number: 6 (lower is better) Translates to: VSFNHHAFFQFC*NCKHCSDFVIW Trigger: CCAAATGACGAAGTCACTGCAGTGCTTGCAGTTCAAACAGAATTGAAAGAATGCATGGTGGTTAAAACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291009.4
CDS TCA 72 bp	TGCAAGCACTGCAGTGACTTCGTCATTTGGACGTACTaGCTTGGGAATGTCAAAATTCTTTATTATGATCTT	+
Preference number: 6 (lower is better) Translates to: CKHCSDFVIWTY*LGNVKILYYDL Trigger: AAGATCATAATAAAGAATTTTGACATTCCCAAGTCAGTACGTCCAAATGACGAAGTCACTGCAGTGCTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291009.4

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