Pregenerated sensors for PIN1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000267289Ensembl transcript IDs: ENST00000591174.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTCTGCACCAGCCAGACTCTTCCGCATGGGAGGGCTGGGGGCTTaGGGACCTCCGGGAACAGCTCAGGCAGGCGGGAGTTGCTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: PSAPARLFRMGGLGA*GPPGTAQAGGSCCG Trigger: GCCGCAGCAACTCCCGCCTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCCCAGCCCTCCCATGCGGAAGAGTCTGGCTGGTGCAGAGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS CCA 90 bp | AAGTTGAGCCCTCTGCACCAGCCAGACTCTTCCGCATGGGAGGGCTaGGGGCTTGCGGACCTCCGGGAACAGCTCAGGCAGGCGGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: KLSPLHQPDSSAWEG*GLADLREQLRQAGV Trigger: AACTCCCGCCTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCCCAGCCCTCCCATGCGGAAGAGTCTGGCTGGTGCAGAGGGCTCAACTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS GCA 90 bp | GGGGCTTGCGGACCTCCGGGAACAGCTCAGGCAGGCGGGAGTTGCTaGGGCATTAGCCAATCCATAAGCTCTATCCCGCCTGGGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GACGPPGTAQAGGSC*GISQSISSIPPGWA Trigger: AGCCCACCCAGGCGGGATAGAGCTTATGGATTGGCTAATGCCGCAGCAACTCCCGCCTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS GCA 90 bp | CTGGGGGCTTGCGGACCTCCGGGAACAGCTCAGGCAGGCGGGAGTTaGTGCGGCATTAGCCAATCCATAAGCTCTATCCCGCCTGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LGACGPPGTAQAGGS*CGISQSISSIPPGW Trigger: CCACCCAGGCGGGATAGAGCTTATGGATTGGCTAATGCCGCAGCAACTCCCGCCTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS CCA 90 bp | CCTAGGGAAAAGTTGAGCCCTCTGCACCAGCCAGACTCTTCCGCATaGGAGGGCTGGGGGCTTGCGGACCTCCGGGAACAGCTCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PREKLSPLHQPDSSA*EGWGLADLREQLRQ Trigger: CTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCCCAGCCCTCCCATGCGGAAGAGTCTGGCTGGTGCAGAGGGCTCAACTTTTCCCTAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS TCA 90 bp | CTGAGCCTCATTCTTTTTAACGGTCACATAGGGTTCTATGCTAGGTaGACTGTAGTTGCACCCTTTGCTGTCAGTGTCTTCAACTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LSLILFNGHIGFYAR*TVVAPFAVSVFNSH Trigger: ATGGGAGTTGAAGACACTGACAGCAAAGGGTGCAACTACAGTTCACCTAGCATAGAACCCTATGTGACCGTTAAAAAGAATGAGGCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS CAA 90 bp | GCCCTCTGCACCAGCCAGACTCTTCCGCATGGGAGGGCTGGGGGCTaGCGGACCTCCGGGAACAGCTCAGGCAGGCGGGAGTTGCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: ALCTSQTLPHGRAGG*RTSGNSSGRRELLR Trigger: CCGCAGCAACTCCCGCCTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCCCAGCCCTCCCATGCGGAAGAGTCTGGCTGGTGCAGAGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS CAA 72 bp | ACCAGCCAGACTCTTCCGCATGGGAGGGCTGGGGGCTaGCGGACCTCCGGGAACAGCTCAGGCAGGCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TSQTLPHGRAGG*RTSGNSSGRRE Trigger: CTCCCGCCTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCCCAGCCCTCCCATGCGGAAGAGTCTGGCTGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS CCA 72 bp | CCTCTGCACCAGCCAGACTCTTCCGCATGGGAGGGCTaGGGGCTTGCGGACCTCCGGGAACAGCTCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PLHQPDSSAWEG*GLADLREQLRQ Trigger: CTGCCTGAGCTGTTCCCGGAGGTCCGCAAGCCCCCAGCCCTCCCATGCGGAAGAGTCTGGCTGGTGCAGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS GCA 72 bp | TGCGGACCTCCGGGAACAGCTCAGGCAGGCGGGAGTTaGTGCGGCATTAGCCAATCCATAAGCTCTATCCCG | + |
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Preference number: 6 (lower is better) Translates to: CGPPGTAQAGGS*CGISQSISSIP Trigger: CGGGATAGAGCTTATGGATTGGCTAATGCCGCAGCAACTCCCGCCTGCCTGAGCTGTTCCCGGAGGTCCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS CAA 72 bp | CCTGTGTCCCACGGGCTCTGCAGACTCTATTTTAAGTaGGCTAAAACTGAGCCCATCTCCTCCCACCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: PVSHGLCRLYFK*AKTEPISSHLH Trigger: GTGCAGGTGGGAGGAGATGGGCTCAGTTTTAGCCAACTTAAAATAGAGTCTGCAGAGCCCGTGGGACACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS CAA 72 bp | ACTTCTCTTAGCCTTCTACTGCATCCTGCGTCTAATTaGTTGTGGGCAGGTTTCCCTATGAGTTCACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: TSLSLLLHPASN*LWAGFPMSSLH Trigger: GTGAAGTGAACTCATAGGGAAACCTGCCCACAACAAATTAGACGCAGGATGCAGTAGAAGGCTAAGAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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| CDS TCA 72 bp | ATTCTTTTTAACGGTCACATAGGGTTCTATGCTAGGTaGACTGTAGTTGCACCCTTTGCTGTCAGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ILFNGHIGFYAR*TVVAPFAVSVF Trigger: GAAGACACTGACAGCAAAGGGTGCAACTACAGTTCACCTAGCATAGAACCCTATGTGACCGTTAAAAAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591174.1 |
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