Pregenerated sensors for PIN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000127445Ensembl transcript IDs: ENST00000247970.9, ENST00000380889.6, ENST00000585442.5, ENST00000586025.5, ENST00000586352.5, ENST00000587625.5, ENST00000589058.5, ENST00000590540.5, ENST00000591777.1, ENST00000592184.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCGGACGAGGGCCGCCGTaGCTGGCTGTGCTTCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: VRPLAGGQGGAGRPSRPAGRGPP*LAVLHQ Trigger: CTGGTGAAGCACAGCCAGTCACGGCGGCCCTCGTCC...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCGCCTCCAGCACTGTGTaGCGGTGGCAGGGAGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: VRPLAGGQGGAGRPSRPAASSTV*RWQGVG Trigger: CCCCACTCCCTGCCACCGTCACACAGTGCTGGAGGC...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591777.1 |
||
| 3UTR-3UTR GCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCGGGTGATCTTCTCCTaGCGCCAGGACGAGGGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: VRPLAGGQGGAGRPSRPARVIFS*RQDEGR Trigger: GCGGCCCTCGTCCTGGCGGCAGGAGAAGATCACCCG...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| 3UTR-3UTR GCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGGCAGGCTCCCCCTaGCCGTTTTTGCCACCACTG | + |
|
Preference number: 2 (lower is better) Translates to: VRPLAGGQGGAGRPSRPALAGSP*PFLPPL Trigger: CAGTGGTGGCAAAAACGGGCAGGGGGAGCCTGCCAG...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCATGGCTGGGCCGCATaGGTGTTCACCTTTGCGACT | + |
|
Preference number: 2 (lower is better) Translates to: VRPLAGGQGGAGRPSRPAHGWAA*VFTFAT Trigger: AGTCGCAAAGGTGAACACTCATGCGGCCCAGCCATG...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000591777.1 |
||
| 3UTR-3UTR TCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCTCTGGATGTAGCCGTTaGTCAGCTCCAGGGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VRPLAGGQGGAGRPSRPASGCSR*SAPGPP Trigger: AGGAGGCCCTGGAGCTGATCAACGGCTACATCCAGA...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCGCCTCCCACCCCTGCTaGAGTCAATTCCTTAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VRPLAGGQGGAGRPSRPAASHPC*SQFLKG Trigger: TCCCTTAAGGAATTGACTTCAGCAGGGGTGGGAGGC...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000247970.9 |
||
| 3UTR-3UTR GCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGGGCTGTGCTGCCACCTaGTGGACCCCGAAGGCCGGT | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEEGCAAT*WTPKAG Trigger: ACCGGCCTTCGGGGTCCAGCAGGTGGCAGCACAGCC...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGGGCCGGTGTGGCACCTaGGAGCCCAATGCCCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEEGRCGT*EPNAQT Trigger: GGTCTGGGCATTGGGCTCCCAGGTGCCACACCGGCC...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCCCCGAAGGCCGGTGTaGCACCTGGGAGCCCAATGC | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEEPRRPV*HLGAQC Trigger: GCATTGGGCTCCCAGGTGCCACACCGGCCTTCGGGG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGTGTGCTGCCACCTGCTaGACCCCGAAGGCCGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEECAATC*TPKAGV Trigger: CACACCGGCCTTCGGGGTCCAGCAGGTGGCAGCACA...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR-3UTR TCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCAGCAGAGCAGCCTCTaGAGCCTGAGGAAGGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEEQQSSL*SLRKGL Trigger: CAGCCCCTTCCTCAGGCTTCAGAGGCTGCTCTGCTG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR-3UTR GCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGAGGAAGGGGCTGTGCTaGCACCTGCTGGACCCCGAA | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEERKGLC*HLLDPE Trigger: TTCGGGGTCCAGCAGGTGGCAGCACAGCCCCTTCCT...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCCACCTTGGTGGGCCTaGGATGAGGACATCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEEPPWWA*DEDICA Trigger: TGCACAGATGTCCTCATCCCAGGCCCACCAAGGTGG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGAGGATGTACCCACCTTaGTGGGCCTGGGATGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GQALGLSGPSTLNHKKEERMYPP*WAWDED Trigger: GTCCTCATCCCAGGCCCACCAAGGTGGGTACATCCT...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| 3UTR CCA 72 bp | AAAAAGGAAGAGGCAGAGGACAGGATGTACCCACCTTaGTGGGCCTGGGATGAGGACATCTGTGCACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KKEEAEDRMYPP*WAWDEDICAQT Trigger: TGTCTGTGCACAGATGTCCTCATCCCAGGCCCACCAAGGTGGGTACATCCTGTCCTCTGCCTCTTCCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTCTGAGCTGCGGCTCATaGGCTTCTCCCAGCCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPLSCGS*ASPSRA Trigger: CGCCCGGCTGGGAGAAGCGCATGAGCCGCAGCTCAG...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTCGGGTGATCTTCTCCTaGCGCCAGGACGAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPRVIFS*RQDEGR Trigger: GCGGCCCTCGTCCTGGCGGCAGGAGAAGATCACCCG...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR TCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGGGACGAGGGCCGCCGTaGCTGGCTGTGCTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALGRGPP*LAVLHQ Trigger: CTGGTGAAGCACAGCCAGTCACGGCGGCCCTCGTCC...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCTGAGCTGCGGCTCATaGGCTTCTCCCAGCCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALLSCGS*ASPSRA Trigger: CGCCCGGCTGGGAGAAGCGCATGAGCCGCAGCTCAG...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCGGGTGATCTTCTCCTaGCGCCAGGACGAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALRVIFS*RQDEGR Trigger: GCGGCCCTCGTCCTGGCGGCAGGAGAAGATCACCCG...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTGAGGGCCGCCGTGACTaGCTGTGCTTCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPEGRRD*LCFTSR Trigger: CCTGCTGGTGAAGCACAGCCAGTCACGGCGGCCCTC...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR CCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCACCACACTGCCCTaGGTCTGGGAGCCTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALPTTLP*VWEPPT Trigger: GGTGGGAGGCTCCCAGACCCAGGGCAGTGTGGTGGG...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000247970.9 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTCTGGCAGGCTCCCCCTaGCCGTTTTTGCCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPLAGSP*PFLPPL Trigger: CAGTGGTGGCAAAAACGGGCAGGGGGAGCCTGCCAG...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTCGCCGTGACTGGCTGTaGTTCACCAGCAGGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPRRDWL*FTSRCE Trigger: CTCGCACCTGCTGGTGAAGCACAGCCAGTCACGGCG...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR CCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCGAGGGCCGCCGTGACTaGCTGTGCTTCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRPLAGGQGGAGRPSRPAEGRRD*LCFTSR Trigger: CCTGCTGGTGAAGCACAGCCAGTCACGGCGGCCCTC...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCTGGCAGGCTCCCCCTaGCCGTTTTTGCCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALLAGSP*PFLPPL Trigger: CAGTGGTGGCAAAAACGGGCAGGGGGAGCCTGCCAG...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCGCCGTGACTGGCTGTaGTTCACCAGCAGGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRPLAGGQGGAGRPSRPARRDWL*FTSRCE Trigger: CTCGCACCTGCTGGTGAAGCACAGCCAGTCACGGCG...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR TCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGGTAGTACACTCGGCCTaGGCTGCGGCTCATGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALVVHSA*AAAHAL Trigger: AAGCGCATGAGCCGCAGCTCAGGCCGAGTGTACTAC...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000247970.9 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTTCTGGATGTAGCCGTTaGTCAGCTCCAGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPSGCSR*SAPGPP Trigger: AGGAGGCCCTGGAGCTGATCAACGGCTACATCCAGA...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000247970.9 ENST00000586352.5 ENST00000591777.1 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTCATGGCTGGGCCGCATaGGTGTTCACCTTTGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPHGWAA*VFTFAT Trigger: AGTCGCAAAGGTGAACACTCATGCGGCCCAGCCATG...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000591777.1 |
||
| CDS-3UTR TCA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTCTTGGTGTTCTCACCTaGGCTGCGGCTCATGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKGELAGLAALPCPEARPLGVLT*AAAHAL Trigger: AAGCGCATGAGCCGCAGCTCAGGTGAGAACACCAAG...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCGTTTTTGCCACCACTaGTGCTGTTGCCGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPLAGGQGGAGRPSRPARFCHH*CCCRWA Trigger: GGCCCAGCGGCAACAGCAGCAGTGGTGGCAAAAACG...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000586352.5 |
||
| CDS-3UTR GCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCTGTTCTCACCTGAGCTaGGGCTCATGCGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPLAGGQGGAGRPSRPACSHLS*GSCASP Trigger: GGGAGAAGCGCATGAGCCGCAGCTCAGGTGAGAACA...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| CDS-3UTR TCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCAATGGCTTCTGCATCTaGCCTCTGCTGAAGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPLAGGQGGAGRPSRPANGFCI*PLLKAP Trigger: GGGTGCCTTCAGCAGAGGTCAGATGCAGAAGCCATT...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000247970.9 ENST00000586352.5 ENST00000591777.1 |
||
| CDS-3UTR TCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGGCCTCCCACCCCTGCTaGAGTCAATTCCTTAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALASHPC*SQFLKG Trigger: TCCCTTAAGGAATTGACTTCAGCAGGGGTGGGAGGC...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000247970.9 |
||
| CDS-3UTR CCA 90 bp | GTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCGTGATATATCTTCCCTaGGCCTTGGTGTTCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VRPLAGGQGGAGRPSRPAVIYLP*ALVFSP Trigger: AGGTGAGAACACCAAGGCCCAGGGAAGATATATCAC...GGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| CDS-3UTR TCA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGATCTGGGTTCAAATGTaGTATATCTTCCCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFGHWLAGKGELAGLAALIWVQM*YIFPGP Trigger: AGGCCCAGGGAAGATATATCACATTTGAACCCAGAT...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| CDS-3UTR TCA 90 bp | AAACAATTCGGCCCTCGAGTCTGCCTCCAGCACTGTGTGACGGTGGCAGGGAGTGCCTCCAGCACTGTGTaGCGGTGGCAGGGAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQFGPRVCLQHCVTVAGSASSTV*RWQGVG Trigger: CCCCACTCCCTGCCACCGTCACACAGTGCTGGAGGC...ACTCCCTGCCACCGTCACACAGTGCTGGAGGCAGACTCGAGGGCCGAATTGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591777.1 |
||
| CDS-3UTR TCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGGGACGAGGGCCGCCGTaGCTGGCTGTGCTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEEGRGPP*LAVLHQ Trigger: CTGGTGAAGCACAGCCAGTCACGGCGGCCCTCGTCC...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCTGAGCTGCGGCTCATaGGCTTCTCCCAGCCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEELSCGS*ASPSRA Trigger: CGCCCGGCTGGGAGAAGCGCATGAGCCGCAGCTCAG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCGGGTGATCTTCTCCTaGCGCCAGGACGAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEERVIFS*RQDEGR Trigger: GCGGCCCTCGTCCTGGCGGCAGGAGAAGATCACCCG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR TCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGGGTCCCCCAACCTGGTaGGGCCCATTCCTTGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEEGPPTW*GPFLAH Trigger: GTGCGCAAGGAATGGGCCTCACCAGGTTGGGGGACC...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR GCA 90 bp | AAACAATTCGGCCCTCGAGTCTGCCTCCAGCACTGTGTGACGGTGGCAGGGAGTTTCGGCCCTCGAGTCTaGCTCCAGCACTGTGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: KQFGPRVCLQHCVTVAGSFGPRV*LQHCVT Trigger: CGTCACACAGTGCTGGAGGCAGACTCGAGGGCCGAA...ACTCCCTGCCACCGTCACACAGTGCTGGAGGCAGACTCGAGGGCCGAATTGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591777.1 |
||
| CDS-3UTR CCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGGAGGGCCGCCGTGACTaGCTGTGCTTCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEEEGRRD*LCFTSR Trigger: CCTGCTGGTGAAGCACAGCCAGTCACGGCGGCCCTC...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCTGGCAGGCTCCCCCTaGCCGTTTTTGCCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEELAGSP*PFLPPL Trigger: CAGTGGTGGCAAAAACGGGCAGGGGGAGCCTGCCAG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCGCCGTGACTGGCTGTaGTTCACCAGCAGGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEERRDWL*FTSRCE Trigger: CTCGCACCTGCTGGTGAAGCACAGCCAGTCACGGCG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR TCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGGTAGTACACTCGGCCTaGGCTGCGGCTCATGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEEVVHSA*AAAHAL Trigger: AAGCGCATGAGCCGCAGCTCAGGCCGAGTGTACTAC...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCGTTTTTGCCACCACTaGTGCTGTTGCCGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEERFCHH*CCCRWA Trigger: GGCCCAGCGGCAACAGCAGCAGTGGTGGCAAAAACG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR TCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGTCTGGATGTAGCCGTTaGTCAGCTCCAGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEESGCSR*SAPGPP Trigger: AGGAGGCCCTGGAGCTGATCAACGGCTACATCCAGA...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS-3UTR TCA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGTGGTTTCCCCACCTTTaGGAGGGATTCTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GQALGLSGPSTLNHKKEEWFPHL*EGFWGT Trigger: TGTCCCCCAGAATCCCTCTCAAAGGTGGGGAAACCA...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS GCA 90 bp | GGGACGACGCGGAAGAGCCAGGACCCCATGGGAGGGAGGCAGCGCTaGCGCCGCGCCCAAGGGGCGAGCTCGAGCCCTGCTTACGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTTRKSQDPMGGRQR*RRAQGASSSPAYAG Trigger: GCCCGCGTAAGCAGGGCTCGAGCTCGCCCCTTGGGCGCGGCGGCAGCGCTGCCTCCCTCCCATGGGGTCCTGGCTCTTCCGCGTCGTCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGCCCTGCCCCGAGGCCAGGCCTCATGAGTGTTCACCTTaGCGACTGAACAGAGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GKGELAGLAALPCPEARPHECSP*RLNRGA Trigger: CGCTCCTCTGTTCAGTCGCAAAGGTGAACACTCATG...AGGCCTGGCCTCGGGGCAGGGCAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247970.9 ENST00000591777.1 |
||
| CDS-3UTR CAA 90 bp | GGGTTCGGCCACTGGCTGGCGGGCAAGGGGGAGCTGGCCGGCCTAGCCGCCCTGTATCTTCCCTGGGCCTaGGTGTTCTCACCTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFGHWLAGKGELAGLAALYLPWA*VFSPEL Trigger: CAGCTCAGGTGAGAACACCAAGGCCCAGGGAAGATA...CAGGGCGGCTAGGCCGGCCAGCTCCCCCTTGCCCGCCAGCCAGTGGCCGAACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| CDS GCA 90 bp | GAAACAGCAGAAATGGGCCCAGAGCTGGGCAGAGCATCCGGTTTATaGTGGAGGTCCCAGCCACAGGCCAGGGCTAGAGCAGGGTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ETAEMGPELGRASGL*WRSQPQARARAGWA Trigger: CGCCCACCCTGCTCTAGCCCTGGCCTGTGGCTGGGACCTCCAGCATAAACCGGATGCTCTGCCCAGCTCTGGGCCCATTTCTGCTGTTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS-3UTR CAA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGGGTGAGGCCCATTCCTaGCGCACCTCTGCTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQALGLSGPSTLNHKKEEGEAHS*RTSAEG Trigger: GCCTTCAGCAGAGGTGCGCAAGGAATGGGCCTCACC...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS TCA 90 bp | GGTGGGCGAGAGCGCGGGTTCCAGGTGCAAATGCAGCTGAGCTACTaGCTCACTCTAAAACCTTGGCAATGGGCTCTAATCTCCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GGRERGFQVQMQLSY*LTLKPWQWALISLH Trigger: GTGCAGGGAGATTAGAGCCCATTGCCAAGGTTTTAGAGTGAGTCAGTAGCTCAGCTGCATTTGCACCTGGAACCCGCGCTCTCGCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS-3UTR CAA 90 bp | GGACAGGCCCTGGGACTCTCAGGGCCCTCAACCTTAAACCACAAAAAGGAAGAGCTGGTTTCCCCACCTTaGAGAGGGATTCTGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQALGLSGPSTLNHKKEELVSPP*RGILGD Trigger: GTCCCCCAGAATCCCTCTCAAAGGTGGGGAAACCAG...CTCTTCCTTTTTGTGGTTTAAGGTTGAGGGCCCTGAGAGTCCCAGGGCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000587625.5 |
||
| CDS TCA 90 bp | GCCTGGGTGACATGGAGTGTCACCCATAAAGGAAGCCATCAGGGTTaGACTGAGCAGAAACAGCAGAAATGGGCCCAGAGCTGGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AWVTWSVTHKGSHQG*TEQKQQKWAQSWAE Trigger: CTCTGCCCAGCTCTGGGCCCATTTCTGCTGTTTCTGCTCAGTTCAACCCTGATGGCTTCCTTTATGGGTGACACTCCATGTCACCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS TCA 90 bp | AAGACCCTACTGGGTGCCACTCCAAAGGCTGACAGTTCGCCTGGGTaGCATGGAGTGTCACCCATAAAGGAAGCCATCAGGGTTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: KTLLGATPKADSSPG*HGVSPIKEAIRVEL Trigger: CAGTTCAACCCTGATGGCTTCCTTTATGGGTGACACTCCATGTCACCCAGGCGAACTGTCAGCCTTTGGAGTGGCACCCAGTAGGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS TCA 90 bp | CAAGAAACTGGAAGTAAAGACCCTACTGGGTGCCACTCCAAAGGCTaGCAGTTCGCCTGGGTGACATGGAGTGTCACCCATAAAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QETGSKDPTGCHSKG*QFAWVTWSVTHKGS Trigger: GCTTCCTTTATGGGTGACACTCCATGTCACCCAGGCGAACTGTCAGCCTTTGGAGTGGCACCCAGTAGGGTCTTTACTTCCAGTTTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS TCA 90 bp | ATAGTATCAATCCCTGATAACTTCAAGGAGGAAAATAACCCAGAGTaGTGGAACAGAGGAAGCTGGGGGACAGGGAGTGACTCAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: IVSIPDNFKEENNPE*WNRGSWGTGSDSNH Trigger: ATGGTTTGAGTCACTCCCTGTCCCCCAGCTTCCTCTGTTCCATCACTCTGGGTTATTTTCCTCCTTGAAGTTATCAGGGATTGATACTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS GCA 72 bp | CGGAAGAGCCAGGACCCCATGGGAGGGAGGCAGCGCTaGCGCCGCGCCCAAGGGGCGAGCTCGAGCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RKSQDPMGGRQR*RRAQGASSSPA Trigger: AGCAGGGCTCGAGCTCGCCCCTTGGGCGCGGCGGCAGCGCTGCCTCCCTCCCATGGGGTCCTGGCTCTTCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS TCA 72 bp | CCCTGCCTCAGCTTCCTCAGGCTTCCCGGCGGCTCCTaGGGCTCGCAGTCCCCACAACAGGGCGGGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PCLSFLRLPGGS*GSQSPQQGGPG Trigger: CCCCGGCCCGCCCTGTTGTGGGGACTGCGAGCCTCAGGAGCCGCCGGGAAGCCTGAGGAAGCTGAGGCAGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CCA 72 bp | GAGGCCGGGCAACACCCTACGCCCTTTGCAGGGTACTaGGGTGTCTCCCTCCCAGGGGTGCCCCCGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EAGQHPTPFAGY*GVSLPGVPPGP Trigger: TGGGCCCGGGGGCACCCCTGGGAGGGAGACACCCCAGTACCCTGCAAAGGGCGTAGGGTGTTGCCCGGCCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS GCA 72 bp | CCAGCAAGGTGCAGAGACGTCCCCCGGGGTGTCAGGTaGATTAGGCCGAGAGGTATCAGCCGGGCCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PARCRDVPRGVR*IRPRGISRAGR Trigger: CCTGCCGGCCCGGCTGATACCTCTCGGCCTAATGCACCTGACACCCCGGGGGACGTCTCTGCACCTTGCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS GCA 72 bp | TTGTGGACCCGAGGCCGGGCAACACCCTACGCCCTTTaGAGGGTACTGGGGTGTCTCCCTCCCAGGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LWTRGRATPYAL*RVLGCLPPRGA Trigger: GGCACCCCTGGGAGGGAGACACCCCAGTACCCTGCAAAGGGCGTAGGGTGTTGCCCGGCCTCGGGTCCACAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CCA 72 bp | TGGAGGTCCCAGCCACAGGCCAGGGCTAGAGCAGGGTaGGCGAGAGCGCGGGTTCCAGGTGCAAATGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WRSQPQARARAG*ARARVPGANAA Trigger: AGCTGCATTTGCACCTGGAACCCGCGCTCTCGCCCACCCTGCTCTAGCCCTGGCCTGTGGCTGGGACCTCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS GCA 72 bp | CAGAGTGACTCGGGACCTGCCCACAGATGCTGGGCCTaGTCCTCAGGAGTTTGCAGTGACACGGGGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSDSGPAHRCWA*SSGVCSDTGRG Trigger: CCCCCTCCCCGTGTCACTGCAAACTCCTGAGGAGCAGGCCCAGCATCTGTGGGCAGGTCCCGAGTCACTCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS GCA 72 bp | TGGAGGGGAGGGCAGGCAGGAATTCAGCTAGGGTTGTaGTCCCAGGACACCCCTGGGCCCACAGCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: WRGGQAGIQLGL*SQDTPGPTARS Trigger: GCTTCTGGCTGTGGGCCCAGGGGTGTCCTGGGAGCACAACCCTAGCTGAATTCCTGCCTGCCCTCCCCTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS CCA 72 bp | ATGGGCCCAGAGCTGGGCAGAGCATCCGGTTTATGCTaGAGGTCCCAGCCACAGGCCAGGGCTAGAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MGPELGRASGLC*RSQPQARARAG Trigger: CCCTGCTCTAGCCCTGGCCTGTGGCTGGGACCTCCAGCATAAACCGGATGCTCTGCCCAGCTCTGGGCCCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS CCA 72 bp | GGTGTACACAGTAGGGGTGTTAGCAGGGGTAGGTTGTaGACCCGAGGCCGGGCAACACCCTACGCCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GVHSRGVSRGRL*TRGRATPYALC Trigger: GCAAAGGGCGTAGGGTGTTGCCCGGCCTCGGGTCCACAACCTACCCCTGCTAACACCCCTACTGTGTACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CAA 72 bp | TTAGGTGTACACAGTAGGGGTGTTAGCAGGGGTAGGTaGTGGACCCGAGGCCGGGCAACACCCTACGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGVHSRGVSRGR*WTRGRATPYAL Trigger: AAGGGCGTAGGGTGTTGCCCGGCCTCGGGTCCACAACCTACCCCTGCTAACACCCCTACTGTGTACACCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CAA 90 bp | GACTCAGCATTAGGTGTACACAGTAGGGGTGTTAGCAGGGGTAGGTaGTGGACCCGAGGCCGGGCAACACCCTACGCCCTTTGCAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DSALGVHSRGVSRGR*WTRGRATPYALCRV Trigger: TACCCTGCAAAGGGCGTAGGGTGTTGCCCGGCCTCGGGTCCACAACCTACCCCTGCTAACACCCCTACTGTGTACACCTAATGCTGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CCA 72 bp | ACCCTTAAATCGGGCCTAAGCACAGGGGCCATCGTCTaGCAGAATGTCACGGGCGATGTCGCAGACTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TLKSGLSTGAIV*QNVTGDVADSA Trigger: TGCTGAGTCTGCGACATCGCCCGTGACATTCTGCCAGACGATGGCCCCTGTGCTTAGGCCCGATTTAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS TCA 72 bp | CTGGGTGCCACTCCAAAGGCTGACAGTTCGCCTGGGTaGCATGGAGTGTCACCCATAAAGGAAGCCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGATPKADSSPG*HGVSPIKEAIR Trigger: CCTGATGGCTTCCTTTATGGGTGACACTCCATGTCACCCAGGCGAACTGTCAGCCTTTGGAGTGGCACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS CCA 72 bp | CGTGCATGGTGTTGCAGAGCTAGGAACCAGCATTACTaGTGGCCCGATGTTACCCAGGGAGTGAGGGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: RAWCCRARNQHY*WPDVTQGVRGM Trigger: CATACCCCTCACTCCCTGGGTAACATCGGGCCACCAGTAATGCTGGTTCCTAGCTCTGCAACACCATGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CCA 72 bp | ACCATGTGCCACAGGCTCTCCAGACGTGGGCCAATGTaGCAGGATACAGTCCCTGCCCTTAGAGAGCTAACA | + |
|
Preference number: 6 (lower is better) Translates to: TMCHRLSRRGPM*QDTVPALRELT Trigger: TGTTAGCTCTCTAAGGGCAGGGACTGTATCCTGCCACATTGGCCCACGTCTGGAGAGCCTGTGGCACATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS TCA 72 bp | GGAAGTAAAGACCCTACTGGGTGCCACTCCAAAGGCTaGCAGTTCGCCTGGGTGACATGGAGTGTCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSKDPTGCHSKG*QFAWVTWSVTH Trigger: ATGGGTGACACTCCATGTCACCCAGGCGAACTGTCAGCCTTTGGAGTGGCACCCAGTAGGGTCTTTACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS TCA 72 bp | GCATCTCTGGGAATGGCAGCAGTGGGTAACGCTTCCTaGGTGTTTACTCTGAGCTGCGGCTCATGCGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLGMAAVGNAS*VFTLSCGSCAS Trigger: AGAAGCGCATGAGCCGCAGCTCAGAGTAAACACTCAGGAAGCGTTACCCACTGCTGCCATTCCCAGAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000585442.5 ENST00000589058.5 ENST00000590540.5 |
||
| CDS CCA 72 bp | GCATGGTGTTGCAGAGCTAGGAACCAGCATTACTGGTaGCCCGATGTTACCCAGGGAGTGAGGGGTATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AWCCRARNQHYW*PDVTQGVRGMK Trigger: CTTCATACCCCTCACTCCCTGGGTAACATCGGGCCACCAGTAATGCTGGTTCCTAGCTCTGCAACACCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS GCA 72 bp | GCCTTCATTCAACAAATCCATGGTGTATCCACCATGTaGCACAGGCTCTCCAGACGTGGGCCAATGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AFIQQIHGVSTM*HRLSRRGPMWQ Trigger: CTGCCACATTGGCCCACGTCTGGAGAGCCTGTGGCACATGGTGGATACACCATGGATTTGTTGAATGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS TCA 72 bp | GAGCGCGGGTTCCAGGTGCAAATGCAGCTGAGCTACTaGCTCACTCTAAAACCTTGGCAATGGGCTCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: ERGFQVQMQLSY*LTLKPWQWALI Trigger: GATTAGAGCCCATTGCCAAGGTTTTAGAGTGAGTCAGTAGCTCAGCTGCATTTGCACCTGGAACCCGCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS CCA 72 bp | GGGCCTTGGTGTTCTCACCTTTTGCATCTCTGGGAATaGCAGCAGTGGGTAACGCTTCCTGAGTGTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: GPWCSHLLHLWE*QQWVTLPECLL Trigger: GAGTAAACACTCAGGAAGCGTTACCCACTGCTGCCATTCCCAGAGATGCAAAAGGTGAGAACACCAAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585442.5 |
||
| CDS CCA 72 bp | GCAAAACGGAGACCTCACCTTTTGCATCTCTGGGAATaGCAGCAGTGGGTAACGCTTCCTGAGTGTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: AKRRPHLLHLWE*QQWVTLPECLL Trigger: GAGTAAACACTCAGGAAGCGTTACCCACTGCTGCCATTCCCAGAGATGCAAAAGGTGAGGTCTCCGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS CCA 72 bp | TGGGCTCTAATCTCCCTGCACCTCAGTTTTCTCATCTaGCTCCCAGAGTTGCGGCAATTCAGAGAGAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: WALISLHLSFLI*LPELRQFRENL Trigger: TAAGTTCTCTCTGAATTGCCGCAACTCTGGGAGCCAGATGAGAAAACTGAGGTGCAGGGAGATTAGAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380889.6 |
||
| CDS CAA 72 bp | TCCCTGCACCTCAGTTTTCTCATCTGGCTCCCAGAGTaGCGGCAATTCAGAGAGAACTTAAAGCGCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLHLSFLIWLPE*RQFRENLKRLT Trigger: TGTCAAGCGCTTTAAGTTCTCTCTGAATTGCCGCAACTCTGGGAGCCAGATGAGAAAACTGAGGTGCAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380889.6 |
||
| CDS CCA 72 bp | AATCTGAATCTGGGTTCAAATGTGATATATCTTCCCTaGGCCTTGGTGTTCTCACCTGAGCTGCGGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: NLNLGSNVIYLP*ALVFSPELRLM Trigger: CATGAGCCGCAGCTCAGGTGAGAACACCAAGGCCCAGGGAAGATATATCACATTTGAACCCAGATTCAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586352.5 |
||
| CDS CAA 72 bp | GCAAATGCAGCTGAGCTACTGACTCACTCTAAAACCTaGGCAATGGGCTCTAATCTCCCTGCACCTCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ANAAELLTHSKT*AMGSNLPAPQF Trigger: AAACTGAGGTGCAGGGAGATTAGAGCCCATTGCCAAGGTTTTAGAGTGAGTCAGTAGCTCAGCTGCATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380889.6 ENST00000586025.5 ENST00000592184.1 |
||
| CDS CCA 72 bp | GAAAAACATGCCCTGTTACTGGCAATATTATCATTGTaGCTAACCCTTAAATCGGGCCTAAGCACAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EKHALLLAILSL*LTLKSGLSTGA Trigger: GGCCCCTGTGCTTAGGCCCGATTTAAGGGTTAGCCACAATGATAATATTGCCAGTAACAGGGCATGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CAA 72 bp | AATCTGGGTTCAAATGTGATATATCTTCCCTGGGCCTaGGTGTTCTCACCTTTTGCATCTCTGGGAATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NLGSNVIYLPWA*VFSPFASLGMA Trigger: TGCCATTCCCAGAGATGCAAAAGGTGAGAACACCAAGGCCCAGGGAAGATATATCACATTTGAACCCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585442.5 |
||
| CDS CAA 90 bp | ACCTGGCTCCCAGAGTTGCGGCAATTCAGAGAGAACTTAAAGCGCTaGACACAGAGAAAAACATGCCCTGTTACTGGCAATATTATCATT | + |
|
Preference number: 6 (lower is better) Translates to: TWLPELRQFRENLKR*TQRKTCPVTGNIII Trigger: AATGATAATATTGCCAGTAACAGGGCATGTTTTTCTCTGTGTCAAGCGCTTTAAGTTCTCTCTGAATTGCCGCAACTCTGGGAGCCAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586025.5 |
||
| CDS CCA 72 bp | AATCTGAATCTGGGTTCAAATGTGATATATCTTCCCTaGGCCTTGGTGTTCTCACCTTTTGCATCTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NLNLGSNVIYLP*ALVFSPFASLG Trigger: TCCCAGAGATGCAAAAGGTGAGAACACCAAGGCCCAGGGAAGATATATCACATTTGAACCCAGATTCAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585442.5 |
||
| CDS CAA 72 bp | AGAGAAAAACATGCCCTGTTACTGGCAATATTATCATaGTGGCTAACCCTTAAATCGGGCCTAAGCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: REKHALLLAILS*WLTLKSGLSTG Trigger: CCCTGTGCTTAGGCCCGATTTAAGGGTTAGCCACAATGATAATATTGCCAGTAACAGGGCATGTTTTTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380889.6 ENST00000586025.5 |
||
| CDS CAA 90 bp | ATCTGGCTCCCAGAGTTGCGGCAATTCAGAGAGAACTTAAAGCGCTaGACACAGAGAAAAACATGCCCTGTTACTGGCAATATTATCATT | + |
|
Preference number: 6 (lower is better) Translates to: IWLPELRQFRENLKR*TQRKTCPVTGNIII Trigger: AATGATAATATTGCCAGTAACAGGGCATGTTTTTCTCTGTGTCAAGCGCTTTAAGTTCTCTCTGAATTGCCGCAACTCTGGGAGCCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380889.6 |
||