RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIKFYVE (Homo sapiens)

Ensembl gene IDs: ENSG00000115020

Ensembl transcript IDs: ENST00000264380.9, ENST00000308862.10, ENST00000392202.7, ENST00000407449.5, ENST00000422495.5, ENST00000443896.5, ENST00000452564.1, ENST00000474721.1

Found 741 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATCACAGGGCAGAGACTCAGGAGGGATGTCAGGATCCCAGGGGATaGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCCCTC +
Preference number: 1 (lower is better)
Translates to: HHRAETQEGCQDPRG*NLHRTALGQPPHAL
Trigger: GAGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACATCCCTCCTGAGTCTCTGCCCTGTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 90 bp CCCTCAGCCACGTGGGACAGAGGAAGCCAGAAGGACAGGCTGGCATaGGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGA +
Preference number: 1 (lower is better)
Translates to: PSATWDRGSQKDRLA*DPMAQLSSLCLDSR
Trigger: TCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
3UTR CCA 90 bp GGGATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTaGACAGCCCCCTCATGCCCTCGTCCCTCAATCAGGGAATGGAAT +
Preference number: 1 (lower is better)
Translates to: GMSGSQGMEPPPYCS*TAPSCPRPSIREWN
Trigger: ATTCCATTCCCTGATTGAGGGACGAGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp CAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTaGTATGTTCTTGATGCTTCACAGAGGCAACAGCCTGCGGAAGAT +
Preference number: 1 (lower is better)
Translates to: QVQRKHKGDPPGKLL*YVLDASQRQQPAED
Trigger: ATCTTCCGCAGGCTGTTGCCTCTGTGAAGCATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp CTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTaGTCGCTGCCTAAAGCATCTTGTTGGTCATCCACAGGGAGTGGC +
Preference number: 1 (lower is better)
Translates to: LLGSCSTTVCCKVSG*SLPKASCWSSTGSG
Trigger: GCCACTCCCTGTGGATGACCAACAAGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp GATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTaGCTAAAGCATCTTGTTGGTCATCCACAGGGAGTGGCAACAATG +
Preference number: 1 (lower is better)
Translates to: DPAAQLFAAKSLAAR*LKHLVGHPQGVATM
Trigger: CATTGTTGCCACTCCCTGTGGATGACCAACAAGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp TCCTGTAGAGGGTCTCTAAAGGCTCTTATCTGGCTTTTGGGATCCTaGAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCT +
Preference number: 1 (lower is better)
Translates to: SCRGSLKALIWLLGS*STTVCCKVSGCSLP
Trigger: AGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGAGCCTTTAGAGACCCTCTACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp ACGTTCAGGCTGATAGAAGCGGCTGAGTCACTGTCCACTGTGGACTaGAAACTGCTGACTGATGTGCGCTTGCTAGGACTGGCAGAATTA +
Preference number: 1 (lower is better)
Translates to: TFRLIEAAESLSTVD*KLLTDVRLLGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGCCTGAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 90 bp GCTTGTTTCTCCCCATTCTCCTCCCTCAGGAGCTCCAGGTTGTTATaGTGCCAGCCCAAAGGTGTGAAAGGCAGCTCTTTGGATTTTTCC +
Preference number: 1 (lower is better)
Translates to: ACFSPFSSLRSSRLL*CQPKGVKGSSLDFS
Trigger: GGAAAAATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGCATCATAACAACCTGGAGCTCCTGAGGGAGGAGAATGGGGAGAAACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 90 bp GTCTTTAAACCAGGATGGCTCAGAGTGTCCTTCCACGGAGTTCACTaGGTCACTGTCGGGAGAAGGCGTCTCAGAAAATTCTGTACTCTG +
Preference number: 1 (lower is better)
Translates to: VFKPGWLRVSFHGVH*VTVGRRRLRKFCTL
Trigger: CAGAGTACAGAATTTTCTGAGACGCCTTCTCCCGACAGTGACTCAGTGAACTCCGTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 90 bp CATCAGGTCGGACTGTCTGAACAACCTGGCAGACCAATGACACGATaGTGTCCCTCCAAGATGATGACAGTGAGTCACTATGGAGCAACT +
Preference number: 1 (lower is better)
Translates to: HQVGLSEQPGRPMTR*CPSKMMTVSHYGAT
Trigger: AGTTGCTCCATAGTGACTCACTGTCATCATCTTGGAGGGACATCATCGTGTCATTGGTCTGCCAGGTTGTTCAGACAGTCCGACCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp TTTCCTGCTCACCCTTCTCAAACACAATCCTCAATTCCAGCAAACTaGTATCATCACAGGGCAGAGACTCAGGAGGGATGTCAGGATCCC +
Preference number: 1 (lower is better)
Translates to: FPAHPSQTQSSIPAN*YHHRAETQEGCQDP
Trigger: GGGATCCTGACATCCCTCCTGAGTCTCTGCCCTGTGATGATAGCAGTTTGCTGGAATTGAGGATTGTGTTTGAGAAGGGTGAGCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp AAGGCTCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTaGAAAGTCTCTGGCTGCTCGCTGCCTAAAGCATCTTGTTGGTCA +
Preference number: 1 (lower is better)
Translates to: KALIWLLGSCSTTVC*KVSGCSLPKASCWS
Trigger: TGACCAACAAGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp CTAAAGGCTCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTaGTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCATCTTGTTGG +
Preference number: 1 (lower is better)
Translates to: LKALIWLLGSCSTTV*CKVSGCSLPKASCW
Trigger: CCAACAAGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGAGCCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp TGCTCTTGGACAGCCCCCTCATGCCCTCGTCCCTCAATCAGGGAATaGAATGAAGGGTTTTGCATTAATGTGGGAGGCATAGCAAATTCA +
Preference number: 1 (lower is better)
Translates to: CSWTAPSCPRPSIRE*NEGFCINVGGIANS
Trigger: TGAATTTGCTATGCCTCCCACATTAATGCAAAACCCTTCATTCCATTCCCTGATTGAGGGACGAGGGCATGAGGGGGCTGTCCAAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp CTGGTCGTGATGACTAACACAATCCAGCCAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGCTTGTGCCCTTGTGGCAATATGCCC +
Preference number: 1 (lower is better)
Translates to: LVVMTNTIQPTSINH*LSNCYSLCPCGNMP
Trigger: GGGCATATTGCCACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGATTGTGTTAGTCATCACGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 90 bp ATATCCATGTCATCATCCTGGTTCTTGACATCAGGTCGGACTGTCTaGACAACCTGGCAGACCAATGACACGATGATGTCCCTCCAAGAT +
Preference number: 1 (lower is better)
Translates to: ISMSSSWFLTSGRTV*TTWQTNDTMMSLQD
Trigger: ATCTTGGAGGGACATCATCGTGTCATTGGTCTGCCAGGTTGTTCAGACAGTCCGACCTGATGTCAAGAACCAGGATGATGACATGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp CGTTCATCCTCAGTGGTCTCTGTCCTAACATATGTTCGGTTAGCCTaGGGACTGACAGATGTCTCATATGAAGGTACCATAGGAGAACCA +
Preference number: 1 (lower is better)
Translates to: RSSSVVSVLTYVRLA*GLTDVSYEGTIGEP
Trigger: TGGTTCTCCTATGGTACCTTCATATGAGACATCTGTCAGTCCCCAGGCTAACCGAACATATGTTAGGACAGAGACCACTGAGGATGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp AGAAATCAAATACTCTTTTTGGTCAGCAGGGTGAGGGGGCACATGTaGGTACTTGGAGGGCTTCTTGATATGGAAGTTCACGTTGTCCAG +
Preference number: 1 (lower is better)
Translates to: RNQILFLVSRVRGHM*VLGGLLDMEVHVVQ
Trigger: CTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACCCTGCTGACCAAAAAGAGTATTTGATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 90 bp TCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAATCTaGAAGAGCATTCAAGTCTTCCCCAATAGAATTACTGTCTGTGGA +
Preference number: 1 (lower is better)
Translates to: SGFTWIKHRHRASRI*KSIQVFPNRITVCG
Trigger: TCCACAGACAGTAATTCTATTGGGGAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp TCAAACTTTGCCAGGCCAAATCATCCTCTAAAAATATGTTACGGCTaGCTTTCCTACTCCCAACAGGTGTTCGGGGTTCACTTGGATCAA +
Preference number: 1 (lower is better)
Translates to: SNFARPNHPLKICYG*LSYSQQVFGVHLDQ
Trigger: TTGATCCAAGTGAACCCCGAACACCTGTTGGGAGTAGGAAAGCCAGCCGTAACATATTTTTAGAGGATGATTTGGCCTGGCAAAGTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp TATAATCCAGTGTCATCCTGTAGAGGGTCTCTAAAGGCTCTTATCTaGCTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCT +
Preference number: 1 (lower is better)
Translates to: YNPVSSCRGSLKALI*LLGSCSTTVCCKVS
Trigger: AGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGAGCCTTTAGAGACCCTCTACAGGATGACACTGGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp ATGCTGGCTGATCTATTTCGAGCAGGAGATTTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTTGAAAGAGGAGTATTTGAGGAATCT +
Preference number: 1 (lower is better)
Translates to: MLADLFRAGDFPASS*TDTSLVERGVFEES
Trigger: AGATTCCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAATCTCCTGCTCGAAATAGATCAGCCAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp TGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTaGGTCGAACATCAACTATTCGCTGGACATAATTCTTCAAGAATT +
Preference number: 1 (lower is better)
Translates to: CPGQSETLFSQQEPR*VEHQLFAGHNSSRI
Trigger: AATTCTTGAAGAATTATGTCCAGCGAATAGTTGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 90 bp CACTTCCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTaGAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAAC +
Preference number: 1 (lower is better)
Translates to: HFPTYRQLHRYQKPK*KFMEFYHSITDSLN
Trigger: GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR TCA 90 bp GGAGTTTTACCATTCCATTACGGACAGTCTAAACAGCCACAGAACTaGAAAGCCTTGGCATACAGTGGTGAACACGATGAAGAAATAAAA +
Preference number: 1 (lower is better)
Translates to: GVLPFHYGQSKQPQN*KALAYSGEHDEEIK
Trigger: TTTTATTTCTTCATCGTGTTCACCACTGTATGCCAAGGCTTTTCAGTTCTGTGGCTGTTTAGACTGTCCGTAATGGAATGGTAAAACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR CCA 90 bp TTTACATTAATGACCAAAGTAATGCCATGTTCCAATAACATGTCCTaGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGT +
Preference number: 1 (lower is better)
Translates to: FTLMTKVMPCSNNMS*AIRDTVFSTRTKVG
Trigger: ACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACATGTTATTGGAACATGGCATTACTTTGGTCATTAATGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp TGTGGTTTCGTAAGCAGCTGGTCCATTGACATCACTAAATCACCTTaGGTCATTCGACTGATTCGTTCCAAAACTTGTGACTTTACATTA +
Preference number: 1 (lower is better)
Translates to: CGFVSSWSIDITKSP*VIRLIRSKTCDFTL
Trigger: TAATGTAAAGTCACAAGTTTTGGAACGAATCAGTCGAATGACCCAAGGTGATTTAGTGATGTCAATGGACCAGCTGCTTACGAAACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 90 bp CAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATaGGTAAAATGTCATGAAGCTGATGACCACAATGCCATCACAAAA +
Preference number: 1 (lower is better)
Translates to: QVITFLGSFTQDHCK*VKCHEADDHNAITK
Trigger: TTTTGTGATGGCATTGTGGTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR GCA 90 bp CAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTaGACATTATGGGAAGAGCAGTCAGATGTAGTTCCTTTTAAAGAC +
Preference number: 1 (lower is better)
Translates to: QNIHVINAKKCHLGS*TLWEEQSDVVPFKD
Trigger: GTCTTTAAAAGGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR GCA 90 bp GAGAAAAGAATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATaGCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGATGTA +
Preference number: 1 (lower is better)
Translates to: EKRIEQNIHVINAKK*HLGSCTLWEEQSDV
Trigger: TACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATTCTTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR CCA 90 bp AATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTaGAAGTTGCACATTATGGGAAGAGCAGTCAGATGTAGTTCCTTT +
Preference number: 1 (lower is better)
Translates to: NRAEHPCYKCKEMPP*KLHIMGRAVRCSSF
Trigger: AAAGGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR CAA 90 bp AGGGATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTaGGACAGCCCCCTCATGCCCTCGTCCCTCAATCAGGGAATGGAA +
Preference number: 2 (lower is better)
Translates to: RDVRIPGDGTSTVLL*DSPLMPSSLNQGME
Trigger: TTCCATTCCCTGATTGAGGGACGAGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCGAAAGCGTCACTTATTaGGAGCTGTTGTCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCESVTY*ELLSSS
Trigger: ACTGGAGGACAACAGCTCTCAATAAGTGACGCTTTC...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPEGFLI*KFTLSS
Trigger: GCTGGACAACGTGAACTTCCATATCAAGAAGCCCTC...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CAA 90 bp GTACAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTaGTGCTATGTTCTTGATGCTTCACAGAGGCAACAGCCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: VQVQRKHKGDPPGKL*CYVLDASQRQQPAE
Trigger: TTCCGCAGGCTGTTGCCTCTGTGAAGCATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTTTGAGGAATCTGGATaGATCAAACTTTGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPFEESG*IKLCQA
Trigger: GGCCTGGCAAAGTTTGATTCATCCAGATTCCTCAAA...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp TTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCGCCAGCCCAAAGGTGTaGAAGGCAGCTCTTTGGATT +
Preference number: 2 (lower is better)
Translates to: FGILQHNCLLQSLWLLAAASPKV*KAALWI
Trigger: AATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGC...GGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCCATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 2 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CAA 90 bp GGCACATGTGGGTACTTGGAGGGCTTCTTGATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGGCTGATAGAAGCGGCTGAGTCACTG +
Preference number: 2 (lower is better)
Translates to: GTCGYLEGFLIWKFT*SSSTFRLIEAAESL
Trigger: CAGTGACTCAGCCGCTTCTATCAGCCTGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTGTCCAGAAGAATTTTaGGTTCATCCTCAGTGGTCT +
Preference number: 2 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPCPEEF*VHPQWS
Trigger: AGACCACTGAGGATGAACGCAAAATTCTTCTGGACA...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCCCCTCAATCAGGGAATaGAATGAAGGGTTTTGCATT +
Preference number: 2 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPPSIRE*NEGFCI
Trigger: AATGCAAAACCCTTCATTCCATTCCCTGATTGAGGG...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATCTGGAAACTGCTGACTaGTGTGCGCTTGCTAGGACT +
Preference number: 2 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDLETAD*CALART
Trigger: AGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAG...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATAGCTCCAGGTTGTTATaGTGCCAGCCCAAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDSSRLL*CQPKGV
Trigger: CACACCTTTGGGCTGGCATCATAACAACCTGGAGCT...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp TCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGTTCCACGGAGTTCACTaGGTCACTGTCGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: SYLAFGILQHNCLLQSLWFHGVH*VTVGRR
Trigger: CCTTCTCCCGACAGTGACTCAGTGAACTCCGTGGAA...CCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp TTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGT +
Preference number: 2 (lower is better)
Translates to: FGILQHNCLLQSLWLLAATWRAS*YGSSRC
Trigger: ACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGT...GGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATCATCATCCTGGTTCTTaGCATCAGGTCGGACTGTCT +
Preference number: 2 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDHHPGS*HQVGLS
Trigger: AGACAGTCCGACCTGATGTCAAGAACCAGGATGATG...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCATCACTATGGAGCAACTaGTGGAGTAGTGCCATCATG +
Preference number: 2 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKASLWSN*WSSAIM
Trigger: CATGATGGCACTACTCCAGCAGTTGCTCCATAGTGA...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCACCGGGCAAGCTGTTGTaGTATGTTCTTGATGCTTCA +
Preference number: 2 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAPGKLL*YVLDAS
Trigger: TGAAGCATCAAGAACATAGCACAACAGCTTGCCCGG...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCAGTCTTTAAACCAGGATaGCTCAGAGTGTCCTTCCAC +
Preference number: 2 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAVFKPG*LRVSFH
Trigger: GTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGAC...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CAA 90 bp TGTTACGGCTGGCTTTCCTACTCCCAACAGGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAGAGCAAGCAGAATCTGAAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: CYGWLSYSQQVFGVH*DQAQTQSKQNLKEH
Trigger: ATGCTCTTTCAGATTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGGGAGTAGGAAAGCCAGCCGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCAAACCTGGCAGACCAATaGCACGATGATGTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSNLADQ*HDDVPP
Trigger: TGGAGGGACATCATCGTGTCATTGGTCTGCCAGGTT...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp ACAATGATTCCGGTACAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGTTCGGATTAGCCAGTTaGCTAATTCCTTTCCTACAA +
Preference number: 2 (lower is better)
Translates to: TMIPVQVQRKHKGDPPGKFGLAS*LIPFLQ
Trigger: TTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAA...CTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTGTACCGGAATCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCACTATGGAGCAACTGCTaGAGTAGTGCCATCATGTGG +
Preference number: 2 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSLWSNC*SSAIMW
Trigger: CCACATGATGGCACTACTCCAGCAGTTGCTCCATAG...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATACAGAGGCAACAGCCTaGGGAAGATTTTTATTTTCC +
Preference number: 2 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDTEATA*GRFLFS
Trigger: GGAAAATAAAAATCTTCCGCAGGCTGTTGCCTCTGT...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp AAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGATGGCATGAGATCCTATaGCCCAGCTGTCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: KCKEMPPWKLHIMGRAVRWHEIL*PSCPAC
Trigger: ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA...TCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR-3UTR CCA 90 bp TTCCTACAATGCAGTTGGGATGCGTTCTCAACCAGTAGCGGTGATCCTGAAACTTGTTCGGGGTTCACTTaGATCAAGCACAGACACAGA +
Preference number: 2 (lower is better)
Translates to: FLQCSWDAFSTSSGDPETCSGFT*IKHRHR
Trigger: TCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACA...AGTTTCAGGATCACCGCTACTGGTTGAGAACGCATCCCAACTGCATTGTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CAA 90 bp GTCGTGATGACTAACACAATCCAGCCAACGTCCATCAACCATTGCTaGTCCAATTGCTATAGCTTGTGCCCTTGTGGCAATATGCCCATT +
Preference number: 2 (lower is better)
Translates to: VVMTNTIQPTSINHC*SNCYSLCPCGNMPI
Trigger: AATGGGCATATTGCCACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGATTGTGTTAGTCATCACGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp CTCCAGGTTGTTATGATGCCAGCCCAAAGGTGTGAAAGGCAGCTCTTTGGATTTGACAGATGTCTCATATaGAGGTACCATAGGAGAACC +
Preference number: 2 (lower is better)
Translates to: LQVVMMPAQRCERQLFGFDRCLI*RYHRRT
Trigger: GGTTCTCCTATGGTACCTTCATATGAGACATCTGTC...AAATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGCATCATAACAACCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAATTCCTTTCCTACAATaGAGTTGGGATGCGTTCTCA +
Preference number: 2 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRIPFLQ*SWDAFS
Trigger: TGAGAACGCATCCCAACTGCATTGTAGGAAAGGAAT...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CAA 90 bp ATAGCTTGTGCCCTTGTGGCAATATGCCCATTTCGGATTAGCCAGTaGACTAATTCCTTTCCTACAATGCAGTTGGGATGCGTTCTCAAC +
Preference number: 2 (lower is better)
Translates to: IACALVAICPFRISQ*TNSFPTMQLGCVLN
Trigger: GTTGAGAACGCATCCCAACTGCATTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAATGGGCATATTGCCACAAGGGCACAAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCAAGAGCAAGCAGAATCTaGAAGAGCATTCAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSRASRI*KSIQVF
Trigger: GAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCT...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp ACACAATCCAGCCAACGTCCATCAACCATTGCTTGTCCAATTGCTATAGCTTGTACCAGATCTATCCAGTaGCAGGTTAGTAATGCTGGC +
Preference number: 2 (lower is better)
Translates to: TQSSQRPSTIACPIAIACTRSIQ*QVSNAG
Trigger: GCCAGCATTACTAACCTGTCACTGGATAGATCTGGT...ACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGATTGTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp CATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAGATACCCTCAGCCACGTaGGACAGAGGAAGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: HVINAKKCHLGSCTLWEEIPSAT*DRGSQK
Trigger: CTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTAT...CTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR-3UTR TCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGATACTTCAAGTGCTCATaGCTAGGGGAGTACAGGAAA +
Preference number: 2 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRYFKCS*LGEYRK
Trigger: TTTCCTGTACTCCCCTAGTCATGAGCACTTGAAGTA...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR TCA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCAGCCTCCTCTTAGCTTaGTTGTACAGCCTAGGTGCT +
Preference number: 2 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLSLLLA*LYSLGA
Trigger: AGCACCTAGGCTGTACAATCAAGCTAAGAGGAGGCT...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTTGCCCAGGCTGGAATaGAATGGTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMLPRLE*NGVIPA
Trigger: AGCTGGGATTACACCATTGCATTCCAGCCTGGGCAA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR CAA 90 bp GAGCAGGAGATTTCCCAGCATCCTCTTGCACAGATACAAGTCTTGTaGAAAGAGGAGTATTTGAGGAATCTGGATGAATCAAACTTTGCC +
Preference number: 2 (lower is better)
Translates to: EQEISQHPLAQIQVL*KEEYLRNLDESNFA
Trigger: GGCAAAGTTTGATTCATCCAGATTCCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAATCTCCTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACATGTAGCTTATTTTTaGTCCTTTGTTCCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRHVAYF*SFVPVP
Trigger: GGGGACAGGAACAAAGGACCAAAAATAAGCTACATG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGAGCCACCCAAGTAGTTaGGGTTACAGGTATATGCCA +
Preference number: 2 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMSHPSS*GYRYMP
Trigger: TGGCATATACCTGTAACCCCAACTACTTGGGTGGCT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAACAGAAGCCATTCCTGTaGAGCATTCCTGCTATGCAC +
Preference number: 2 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEQKPFL*SIPAMH
Trigger: GTGCATAGCAGGAATGCTCCACAGGAATGGCTTCTG...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR CAA 90 bp CAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGGAGTATTaGAGGAATCTGGATGAATCAAACTTTGCCAGGCCAAATCATCCT +
Preference number: 2 (lower is better)
Translates to: QHPLAQIQVLLKEEY*RNLDESNFARPNHP
Trigger: AGGATGATTTGGCCTGGCAAAGTTTGATTCATCCAGATTCCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACAAAAACCCTAGAATATaGGCGTATGCAAGTAAGTGC +
Preference number: 2 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDKNPRI*AYASKC
Trigger: GCACTTACTTGCATACGCTCATATTCTAGGGTTTTT...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAGAACTGAAAAGCCTTaGCATACAGTGGTGAACACG +
Preference number: 2 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHERTEKP*HTVVNT
Trigger: CGTGTTCACCACTGTATGCCAAGGCTTTTCAGTTCT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACAAAAACAGGCAAGCTaGAAAGATAAACAACATGAC +
Preference number: 2 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVQKQAS*KDKQHD
Trigger: GTCATGTTGTTTATCTTTCCAGCTTGCCTGTTTTTG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACACTGTCCACTGTGGACTaGAAACTGCTGACTGATGTG +
Preference number: 2 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTLSTVD*KLLTDV
Trigger: CACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGACACTTTACCTCTGTaGATAAAACAAGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDDTLPL*IKQVFP
Trigger: AGGAAACACTTGTTTTATTCACAGAGGTAAAGTGTC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAATATACTCTAGGCCTTaGAGGAAAGGGAAACAGTCA +
Preference number: 2 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEIYSRP*RKGKQS
Trigger: TGACTGTTTCCCTTTCCTTCAAGGCCTAGAGTATAT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR GCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAACCTGTGGAGCATTCCTaGTATGCACATAGAATTGAA +
Preference number: 2 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEPVEHS*YAHRIE
Trigger: TTCAATTCTATGTGCATAGCAGGAATGCTCCACAGG...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTTAGTCATAAGTCCTTaGTCAACTTGCTTCCAGTTC +
Preference number: 2 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMLVISP*STCFQF
Trigger: GAACTGGAAGCAAGTTGACCAAGGACTTATGACTAA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR GCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGATGAGAGATTACCTTTaGAAGGCAGCAACTATTGTT +
Preference number: 2 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMMRDYL*KAATIV
Trigger: AACAATAGTTGCTGCCTTGCAAAGGTAATCTCTCAT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACATTCTGTACTCTGCAGTaGTCTATACAGCGCATACTC +
Preference number: 2 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTFCTLQ*SIQRIL
Trigger: GAGTATGCGCTGTATAGACCACTGCAGAGTACAGAA...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACATTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTT +
Preference number: 2 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTFPASS*TDTSLV
Trigger: AACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAA...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 2 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTTSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACAAAAATATGTTACGGCTaGCTTTCCTACTCCCAACAG +
Preference number: 2 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTKICYG*LSYSQQ
Trigger: CTGTTGGGAGTAGGAAAGCCAGCCGTAACATATTTT...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR GCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATTAAGAAAATTTTCATaGCACTTCCCAACCTACAGA +
Preference number: 2 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHELRKFS*HFPTYR
Trigger: TCTGTAGGTTGGGAAGTGGCATGAAAATTTTCTTAA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR GCA 72 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTaGTCTTGGACAGCCCCCTCATGCCCTCGTCCCTCA +
Preference number: 3 (lower is better)
Translates to: MSGSQGMEPPPY*SWTAPSCPRPS
Trigger: TGAGGGACGAGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp GCAGAGACTCAGGAGGGATGTCAGGATCCCAGGGGATaGAACCTCCACCGTACTGCTCTTGGACAGCCCCCT +
Preference number: 3 (lower is better)
Translates to: AETQEGCQDPRG*NLHRTALGQPP
Trigger: AGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACATCCCTCCTGAGTCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp GAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATaGCCTCGTCCCTCAATCAGGGAATGGAATGAAGGG +
Preference number: 3 (lower is better)
Translates to: EPPPYCSWTAPS*PRPSIREWNEG
Trigger: CCCTTCATTCCATTCCCTGATTGAGGGACGAGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCTCCAATTGCTATAGCTaGTGCCCTTGTGGCAATATG +
Preference number: 3 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCSNCYS*CPCGNM
Trigger: CATATTGCCACAAGGGCACAAGCTATAGCAATTGGA...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATaGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGAT +
Preference number: 3 (lower is better)
Translates to: EEARRTGWHEIL*PSCPACVWIPD
Trigger: ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
3UTR CCA 72 bp GGGGGCACATGTGGGTACTTGGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGCTCCACGTTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: GGTCGYLEGFLI*KFTLSSSTFRL
Trigger: CAGCCTGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp ACAATGATTCCGGTACAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAG +
Preference number: 3 (lower is better)
Translates to: TMIPVQVQRKHKGDPPGKVFGVH*DQAQTQ
Trigger: CTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACAC...CTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTGTACCGGAATCATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 72 bp CCAGGATGGCTCAGAGTGTCCTTCCACGGAGTTCACTaGGTCACTGTCGGGAGAAGGCGTCTCAGAAAATTC +
Preference number: 3 (lower is better)
Translates to: PGWLRVSFHGVH*VTVGRRRLRKF
Trigger: GAATTTTCTGAGACGCCTTCTCCCGACAGTGACTCAGTGAACTCCGTGGAAGGACACTCTGAGCCATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 72 bp GGTGAGGGGGCACATGTGGGTACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGTCCAGCTCCACGTTCA +
Preference number: 3 (lower is better)
Translates to: GEGAHVGTWRAS*YGSSRCPAPRS
Trigger: TGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp AGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTaGTATGTTCTTGATGCTTCACAGAGGCAACAGCCT +
Preference number: 3 (lower is better)
Translates to: RKHKGDPPGKLL*YVLDASQRQQP
Trigger: AGGCTGTTGCCTCTGTGAAGCATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp CTGATAGAAGCGGCTGAGTCACTGTCCACTGTGGACTaGAAACTGCTGACTGATGTGCGCTTGCTAGGACTG +
Preference number: 3 (lower is better)
Translates to: LIEAAESLSTVD*KLLTDVRLLGL
Trigger: CAGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAGTGACTCAGCCGCTTCTATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp GCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTaGCTAAAGCATCTTGTTGGTCATCCACAGGGAGTG +
Preference number: 3 (lower is better)
Translates to: AQLFAAKSLAAR*LKHLVGHPQGV
Trigger: CACTCCCTGTGGATGACCAACAAGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCAATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGG +
Preference number: 3 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAIWKFT*SSSTFR
Trigger: CCTGAACGTGGAGCTGGACAACGTGAACTTCCATAT...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 72 bp GGAGCTCCAGGTTGTTATGATGCCAGCCCAAAGGTGTaGAAGGCAGCTCTTTGGATTTTTCCTCTACTCGGC +
Preference number: 3 (lower is better)
Translates to: GAPGCYDASPKV*KAALWIFPLLG
Trigger: GCCGAGTAGAGGAAAAATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGCATCATAACAACCTGGAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp ATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTaGAAAGTCTCTGGCTGCTCGCTGCCTAAAGCATCT +
Preference number: 3 (lower is better)
Translates to: IWLLGSCSTTVC*KVSGCSLPKAS
Trigger: AGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp CTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTaGTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCA +
Preference number: 3 (lower is better)
Translates to: LIWLLGSCSTTV*CKVSGCSLPKA
Trigger: TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp GGGTCTCTAAAGGCTCTTATCTGGCTTTTGGGATCCTaGAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: GSLKALIWLLGS*STTVCCKVSGC
Trigger: GCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGAGCCTTTAGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp AAAGTCTCTGGCTGCTCGCTGCCTAAAGCATCTTGTTaGTCATCCACAGGGAGTGGCAACAATGATTCCGGT +
Preference number: 3 (lower is better)
Translates to: KVSGCSLPKASC*SSTGSGNNDSG
Trigger: ACCGGAATCATTGTTGCCACTCCCTGTGGATGACCAACAAGATGCTTTAGGCAGCGAGCAGCCAGAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATTTTCCTACAATGCAGTaGGGATGCGTTCTCAACCAG +
Preference number: 3 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACGCATCCCAACTGCATTGTAGGAAA...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 72 bp TCATCATCCTGGTTCTTGACATCAGGTCGGACTGTCTaGACAACCTGGCAGACCAATGACACGATGATGTCC +
Preference number: 3 (lower is better)
Translates to: SSSWFLTSGRTV*TTWQTNDTMMS
Trigger: GGACATCATCGTGTCATTGGTCTGCCAGGTTGTTCAGACAGTCCGACCTGATGTCAAGAACCAGGATGATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp GCCAGGCCAAATCATCCTCTAAAAATATGTTACGGCTaGCTTTCCTACTCCCAACAGGTGTTCGGGGTTCAC +
Preference number: 3 (lower is better)
Translates to: ARPNHPLKICYG*LSYSQQVFGVH
Trigger: GTGAACCCCGAACACCTGTTGGGAGTAGGAAAGCCAGCCGTAACATATTTTTAGAGGATGATTTGGCCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp ATACTCTTTTTGGTCAGCAGGGTGAGGGGGCACATGTaGGTACTTGGAGGGCTTCTTGATATGGAAGTTCAC +
Preference number: 3 (lower is better)
Translates to: ILFLVSRVRGHM*VLGGLLDMEVH
Trigger: GTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACCCTGCTGACCAAAAAGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp TCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGTCATCATCCTGGTTCTaGACATCAGGTCGGACTGTC +
Preference number: 3 (lower is better)
Translates to: SYLAFGILQHNCLLQSLWSSSWF*TSGRTV
Trigger: GACAGTCCGACCTGATGTCAAGAACCAGGATGATGA...CCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 72 bp GGACTGTCTGAACAACCTGGCAGACCAATGACACGATaGTGTCCCTCCAAGATGATGACAGTGAGTCACTAT +
Preference number: 3 (lower is better)
Translates to: GLSEQPGRPMTR*CPSKMMTVSHY
Trigger: ATAGTGACTCACTGTCATCATCTTGGAGGGACATCATCGTGTCATTGGTCTGCCAGGTTGTTCAGACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 72 bp CAAACTGACGGATATCCATGTCATCATCCTGGTTCTTaGCATCAGGTCGGACTGTCTGAACAACCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: QTDGYPCHHPGS*HQVGLSEQPGR
Trigger: TCTGCCAGGTTGTTCAGACAGTCCGACCTGATGTCAAGAACCAGGATGATGACATGGATATCCGTCAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCAGCACAGATACAAGTCTaGTTGAAAGAGGAGTATTTG +
Preference number: 3 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAAQIQV*LKEEYL
Trigger: CAAATACTCCTCTTTCAACAAGACTTGTATCTGTGC...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCAAATCAAATACTCTTTTaGGTCAGCAGGGTGAGGGGG +
Preference number: 3 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSNQILF*VSRVRG
Trigger: CCCCCTCACCCTGCTGACCAAAAAGAGTATTTGATT...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR TCA 72 bp CACCTAGGGGGAGACACCTTGTACTTCAAGTGCTCATaGCTAGGGGAGTACAGGAAACAGACAGGAATAATA +
Preference number: 3 (lower is better)
Translates to: HLGGDTLYFKCS*LGEYRKQTGII
Trigger: TATTATTCCTGTCTGTTTCCTGTACTCCCCTAGTCATGAGCACTTGAAGTACAAGGTGTCTCCCCCTAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR TCA 72 bp CCCTTGTGGCAATATGCCCATTTCGGATTAGCCAGTTaGCTAATTCCTTTCCTACAATGCAGTTGGGATGCG +
Preference number: 3 (lower is better)
Translates to: PLWQYAHFGLAS*LIPFLQCSWDA
Trigger: CGCATCCCAACTGCATTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAATGGGCATATTGCCACAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp ATCCAGCCAACGTCCATCAACCATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGTGGCAATATGCCCATT +
Preference number: 3 (lower is better)
Translates to: IQPTSINHCLSN*YSLCPCGNMPI
Trigger: AATGGGCATATTGCCACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp ATGACTAACACAATCCAGCCAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGCTTGTGCCCTTGTGGC +
Preference number: 3 (lower is better)
Translates to: MTNTIQPTSINH*LSNCYSLCPCG
Trigger: GCCACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGATTGTGTTAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp ATGATGTCCCTCCAAGATGATGACAGTGAGTCACTATaGAGCAACTGCTGGAGTAGTGCCATCATGTGGTTA +
Preference number: 3 (lower is better)
Translates to: MMSLQDDDSESL*SNCWSSAIMWL
Trigger: TAACCACATGATGGCACTACTCCAGCAGTTGCTCCATAGTGACTCACTGTCATCATCTTGGAGGGACATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp TCAGTGGTCTCTGTCCTAACATATGTTCGGTTAGCCTaGGGACTGACAGATGTCTCATATGAAGGTACCATA +
Preference number: 3 (lower is better)
Translates to: SVVSVLTYVRLA*GLTDVSYEGTI
Trigger: TATGGTACCTTCATATGAGACATCTGTCAGTCCCCAGGCTAACCGAACATATGTTAGGACAGAGACCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp ACACAATCCAGCCAACGTCCATCAACCATTGCTTGTCCAATTGCTATAGCTTGTTGGATGAATCAAACTTaGCCAGGCCAAATCATCCTC +
Preference number: 3 (lower is better)
Translates to: TQSSQRPSTIACPIAIACWMNQT*PGQIIL
Trigger: GAGGATGATTTGGCCTGGCAAAGTTTGATTCATCCA...ACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp GTAAGCAGCTGGTCCATTGACATCACTAAATCACCTTaGGTCATTCGACTGATTCGTTCCAAAACTTGTGAC +
Preference number: 3 (lower is better)
Translates to: VSSWSIDITKSP*VIRLIRSKTCD
Trigger: GTCACAAGTTTTGGAACGAATCAGTCGAATGACCCAAGGTGATTTAGTGATGTCAATGGACCAGCTGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATTCTCGGGACTCATGTaGTATGTTAAGGAAGGAAGT +
Preference number: 3 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVFSGLM*YVKEGS
Trigger: ACTTCCTTCCTTAACATACAACATGAGTCCCGAGAA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR CCA 72 bp CAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTaGGTCGAACATCAACTATTCGCTGGACATAATTCT +
Preference number: 3 (lower is better)
Translates to: QSETLFSQQEPR*VEHQLFAGHNS
Trigger: AGAATTATGTCCAGCGAATAGTTGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp ATGACCAAAGTAATGCCATGTTCCAATAACATGTCCTaGGCAATCCGAGACACTGTTTTCTCAACAAGAACC +
Preference number: 3 (lower is better)
Translates to: MTKVMPCSNNMS*AIRDTVFSTRT
Trigger: GGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACATGTTATTGGAACATGGCATTACTTTGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACAACAGGACAGATTATaGTCAGAAGCCATTCCTGTG +
Preference number: 3 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTQQDRL*SEAIPV
Trigger: CACAGGAATGGCTTCTGACAATAATCTGTCCTGTTG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR GCA 72 bp GATCTATTTCGAGCAGGAGATTTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTTGAAAGAGGAGTATTT +
Preference number: 3 (lower is better)
Translates to: DLFRAGDFPASS*TDTSLVERGVF
Trigger: AAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAATCTCCTGCTCGAAATAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CCA 72 bp CAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTaGCAGTTTTACACAGGATCACTGCAAATGGGTAAA +
Preference number: 3 (lower is better)
Translates to: QAQQTPTGNYFP*QFYTGSLQMGK
Trigger: TTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACATTAGTCATAAGTCCTaGGTCAACTTGCTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDISHKS*VNLLPV
Trigger: AACTGGAAGCAAGTTGACCAAGGACTTATGACTAAT...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CAA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCTTTCGGATTAGCCAGTaGACTAATTCCTTTCCTACA +
Preference number: 3 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLFRISQ*TNSFPT
Trigger: TGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAA...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR GCA 72 bp CATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTaGACATTATGGGAAGAGCAGTCAGATGTAGTTCCT +
Preference number: 3 (lower is better)
Translates to: HVINAKKCHLGS*TLWEEQSDVVP
Trigger: AGGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR GCA 72 bp ATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATaGCACCTTGGAAGTTGCACATTATGGGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: IEQNIHVINAKK*HLGSCTLWEEQ
Trigger: CTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR CCA 72 bp ATCAACAGGACAGATTATTGTCAGAAGCCATTCCTGTaGAGCATTCCTGCTATGCACATAGAATTGAAACTA +
Preference number: 3 (lower is better)
Translates to: INRTDYCQKPFL*SIPAMHIELKL
Trigger: TAGTTTCAATTCTATGTGCATAGCAGGAATGCTCCACAGGAATGGCTTCTGACAATAATCTGTCCTGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAAAATCCTCAGTGTTTaGTGTATCTTCAAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTKILSV*CIFKRH
Trigger: GTGCCTTTTGAAGATACACAAAACACTGAGGATTTT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAATGAGAGATTACCTTaGCAAGGCAGCAACTATTGT +
Preference number: 3 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHENERLP*QGSNYC
Trigger: ACAATAGTTGCTGCCTTGCAAAGGTAATCTCTCATT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTCAGGCCGCGGACGGTTaGGGCAGGAAGCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: EARRTGWHEILWPSCPACQAADG*GRKRSC
Trigger: GCAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTG...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGACAGGCCGCGGACGGTTaGGGCAGGAAGCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGQAADG*GRKRSC
Trigger: GCAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTG...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTCTGTGGCCATTTCATaGGTCTGCGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPASVAIS*VCASCP
Trigger: GGGGCAGGAGGCGCAGACTCATGAAATGGCCACAGA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCGTCCTCGAAGGGAGCTaGGGGCTGGTCCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAVLEGS*GLVQLP
Trigger: TGGAAGTTGGACCAGCCCTCAGCTCCCTTCGAGGAC...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCGTCCTCGAAGGGAGCTaGGGGCTGGTCCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPVLEGS*GLVQLP
Trigger: TGGAAGTTGGACCAGCCCTCAGCTCCCTTCGAGGAC...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CAA 72 bp AGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTaGGACAGCCCCCTCATGCCCTCGTCCCTCAATCAG +
Preference number: 4 (lower is better)
Translates to: RIPGDGTSTVLL*DSPLMPSSLNQ
Trigger: CTGATTGAGGGACGAGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTTCTGTGGCCATTTCATaGGTCTGCGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EARRTGWHEILWPSCPACSVAIS*VCASCP
Trigger: GGGGCAGGAGGCGCAGACTCATGAAATGGCCACAGA...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp AACAAAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAAGGCAGGCCGCGGACGGTTaGGGCAGGAAGCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: NKTHTKYPQPRGTEEARRQAADG*GRKRSC
Trigger: GCAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTG...CCTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAGTCCTCGAAGGGAGCTaGGGGCTGGTCCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGVLEGS*GLVQLP
Trigger: TGGAAGTTGGACCAGCCCTCAGCTCCCTTCGAGGAC...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCGCTGATAGAAGCGGCTaGGTCACTGTCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAADRSG*VTVHCG
Trigger: TCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGC...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCTCAGGTCGGACTGTCTaGACAACCTGGCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCSGRTV*TTWQTN
Trigger: ATTGGTCTGCCAGGTTGTTCAGACAGTCCGACCTGA...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTAAGGACAGGCTGGCATaGGATCCTATGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVKDRLA*DPMAQL
Trigger: CAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTT...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCACAAGTGCCCAGGTGTaGTTTCGTAAGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCTSAQV*FRKQLV
Trigger: GACCAGCTGCTTACGAAACCACACCTGGGCACTTGT...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATTCTGTGGCCATTTCATaGGTCTGCGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDSVAIS*VCASCP
Trigger: GGGGCAGGAGGCGCAGACTCATGAAATGGCCACAGA...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCGCTGTACGAGGGTCATaGCCTCCAAAGGTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAAVRGS*PPKVGS
Trigger: AGAACCTACCTTTGGAGGTCATGACCCTCGTACAGC...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR TCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCGCCAGCCCAAAGGTGTaGAAGGCAGCTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPASPKV*KAALWI
Trigger: AATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGC...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCAACCTGGCAGACCAATaGCACGATGATGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPNLADQ*HDDVPP
Trigger: TGGAGGGACATCATCGTGTCATTGGTCTGCCAGGTT...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCAGCCTCCTCTTAGCTTaGTTGTACAGCCTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCSLLLA*LYSLGA
Trigger: AGCACCTAGGCTGTACAATCAAGCTAAGAGGAGGCT...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTGCTGAAGAGCGCCGCTaGAGTTCCTCATTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVAEERR*SSSLSC
Trigger: GCAGCTTAATGAGGAACTCCAGCGGCGCTCTTCAGC...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAGCCAGAAGGACAGGCTaGCATGAGATCCTATGGCCC +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGARRTG*HEILWP
Trigger: GGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTATACCCTCAGCCACGTaGGACAGAGGAAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EARRTGWHEILWPSCPACIPSAT*DRGSQK
Trigger: CTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTAT...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGCTGAGGCTTCGAAGCTaGACAGCTGTACGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWLRLRS*TAVRGS
Trigger: TGACCCTCGTACAGCTGTTCAGCTTCGAAGCCTCAG...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR TCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCAGGGTTCTCGGAATGTaGTTACTGGGGAGATACAGA +
Preference number: 4 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCRVLGM*LLGRYR
Trigger: TCTGTATCTCCCCAGTAATCACATTCCGAGAACCCT...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATAAGGACAGGCTGGCATaGGATCCTATGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDKDRLA*DPMAQL
Trigger: CAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTT...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp TCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCAGGCCGCGGACGGTTaGGGCAGGAAGCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SYLAFGILQHNCLLQSLWQAADG*GRKRSC
Trigger: GCAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTG...CCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCGCCCTTGTGGCAATATaGCCATTTCGGATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAALVAI*PFRISQ
Trigger: CTGGCTAATCCGAAATGGGCATATTGCCACAAGGGC...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTAAGGGAGCTGAGGGCTaGTCCAACTTCCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVKGAEG*SNFHSK
Trigger: CTTTGAGTGGAAGTTGGACCAGCCCTCAGCTCCCTT...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCGACAGTGAGTCACTATaGAGCAACTGCTGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCDSESL*SNCWSS
Trigger: ACTACTCCAGCAGTTGCTCCATAGTGACTCACTGTC...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTGGCATGAGATCCTATaGCCCAGCTGTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWWHEIL*PSCPAC
Trigger: ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATACCCTCAGCCACGTaGGACAGAGGAAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQIPSAT*DRGSQK
Trigger: CTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTAT...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATACCCTCAGCCACGTaGGACAGAGGAAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWIPSAT*DRGSQK
Trigger: CTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTAT...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCACCAGATCTATCCAGTaGCAGGTTAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPATRSIQ*QVSNAG
Trigger: GCCAGCATTACTAACCTGTCACTGGATAGATCTGGT...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTGCGCATACTCATCTCTaGAAAGCTGGTCGTGATGAC +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVAHTHL*KAGRDD
Trigger: GTCATCACGACCAGCTTTTCAGAGATGAGTATGCGC...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGCTGATAGAAGCGGCTaGGTCACTGTCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: TGWHEILWPSCPACVWIPADRSG*VTVHCG
Trigger: TCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGC...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCAGCAGAGTCCAGTGTTaGGGACGTCTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPASRVQC*GRLIIC
Trigger: ACAGATGATAAGACGTCCCCAACACTGGACTCTGCT...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAAAGGGAGCTGAGGGCTaGTCCAACTTCCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGKGAEG*SNFHSK
Trigger: CTTTGAGTGGAAGTTGGACCAGCCCTCAGCTCCCTT...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGCTGAAGAGCGCCGCTaGAGTTCCTCATTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TGWHEILWPSCPACVWIPAEERR*SSSLSC
Trigger: GCAGCTTAATGAGGAACTCCAGCGGCGCTCTTCAGC...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTGTTCGGGGTTCACTTaGATCAAGCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPCSGFT*IKHRHR
Trigger: TCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACA...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTATGTTCGGTTAGCCTaGGGACTGACAGATGTCTCA +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAYVRLA*GLTDVS
Trigger: TGAGACATCTGTCAGTCCCCAGGCTAACCGAACATA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCGTCTTTAAACCAGGATaGCTCAGAGTGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPVFKPG*LRVSFH
Trigger: GTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGAC...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTCTCCTGTGTTCTCCTaGGGATGTTGCAAACTGTTG +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPASPVFS*GCCKLL
Trigger: CAACAGTTTGCAACATCCCCAGGAGAACACAGGAGA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308862.10
CDS-3UTR CCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTCCAGCCTGTGTTTaGATTCCAGATGGTGACTAC +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPACPACV*IPDGDY
Trigger: GTAGTCACCATCTGGAATCCAAACACAGGCTGGACA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGCCAGAAGGACAGGCTaGCATGAGATCCTATGGCCC +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGARRTG*HEILWP
Trigger: GGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
3UTR CAA 72 bp AGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTaGATGCTTCACAGAGGCAACAGCCTGCGGAAGATT +
Preference number: 4 (lower is better)
Translates to: RETRRASCCAMF*MLHRGNSLRKI
Trigger: AATCTTCCGCAGGCTGTTGCCTCTGTGAAGCATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCAAAGGGGGCTCATCTTaGTCAGGAGTCAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAKGGSS*SGVKGL
Trigger: TAAACCTTTGACTCCTGATCAAGATGAGCCCCCTTT...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTTTATAAGGTGTGGGTaGCCTAACAGACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAFIRCG*PNRLCP
Trigger: AGGACACAGTCTGTTAGGTCACCCACACCTTATAAA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGGCGCATACTCATCTCTaGAAAGCTGGTCGTGATGAC +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWAHTHL*KAGRDD
Trigger: GTCATCACGACCAGCTTTTCAGAGATGAGTATGCGC...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTTTCCACGGAGTTCACTaGGTCACTGTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGFHGVH*VTVGRR
Trigger: CCTTCTCCCGACAGTGACTCAGTGAACTCCGTGGAA...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGCTGGAAACTGCTGACTaGTGTGCGCTTGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVLETAD*CALART
Trigger: AGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAG...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGCTGATAGAAGCGGCTaGGTCACTGTCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGADRSG*VTVHCG
Trigger: TCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGC...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp AGAACAAAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAAAAGGACAGGCTGGCATaGGATCCTATGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RTKPTPNTLSHVGQRKPEKDRLA*DPMAQL
Trigger: CAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTT...TTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR GCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACAGGCCGCGGACGGTTaGGGCAGGAAGCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRQAADG*GRKRSC
Trigger: GCAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGGCCCTTGTGGCAATATaGCCATTTCGGATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWALVAI*PFRISQ
Trigger: CTGGCTAATCCGAAATGGGCATATTGCCACAAGGGC...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGGCCCTTGTGGCAATATaGCCATTTCGGATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQALVAI*PFRISQ
Trigger: CTGGCTAATCCGAAATGGGCATATTGCCACAAGGGC...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCACAGAGGCAACAGCCTaGGGAAGATTTTTATTTTCC +
Preference number: 4 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCTEATA*GRFLFS
Trigger: GGAAAATAAAAATCTTCCGCAGGCTGTTGCCTCTGT...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCAAGGGAGCTGAGGGCTaGTCCAACTTCCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: FGILQHNCLLQSLWLLAAKGAEG*SNFHSK
Trigger: CTTTGAGTGGAAGTTGGACCAGCCCTCAGCTCCCTT...GGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTTCAGGTCACTATCCTaGCTTTTCCCCTCCATGATT +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAFRSLS*LFPSMI
Trigger: AATCATGGAGGGGAAAAGCCAGGATAGTGACCTGAA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR CCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTTCCTACAATGCAGTTaGGATGCGTTCTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPFLQCS*DAFSTS
Trigger: ACTGGTTGAGAACGCATCCCAACTGCATTGTAGGAA...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVEGFLI*KFTLSS
Trigger: GCTGGACAACGTGAACTTCCATATCAAGAAGCCCTC...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCCAACAAGAACCAAGGTaGGTCGAACATCAACTATTC +
Preference number: 4 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCQQEPR*VEHQLF
Trigger: GAATAGTTGATGTTCGACCCACCTTGGTTCTTGTTG...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCCAATAACATGTCCTaGGCAATCCGAGACACTGTT +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPSNNMS*AIRDTV
Trigger: AACAGTGTCTCGGATTGCCCAGGACATGTTATTGGA...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGACCACCGTACTGCTCTTaGACAGCCCCCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRPPYCS*TAPSCP
Trigger: AGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGG...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCGGAATGTGATTACTaGGGAGATACAGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPSECDY*GDTEDH
Trigger: GTGATCCTCTGTATCTCCCCAGTAATCACATTCCGA...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTTGGCATGAGATCCTATaGCCCAGCTGTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGWHEIL*PSCPAC
Trigger: ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATCTGAGGCTTCGAAGCTaGACAGCTGTACGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDLRLRS*TAVRGS
Trigger: TGACCCTCGTACAGCTGTTCAGCTTCGAAGCCTCAG...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTTAATACTGTGCTaGGGCTTCGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: EARRTGWHEILWPSCPACVLILC*GFEAEQ
Trigger: CTGTTCAGCTTCGAAGCCTCAGCACAGTATTAAAAC...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR TCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTTTCCAGGGATTTCTTaGTTACAGCAACGACTGCAG +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVFPGIS*LQQRLQ
Trigger: CTGCAGTCGTTGCTGTAATCAAGAAATCCCTGGAAA...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR TCA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTTTTGAGGAATCTGGATaGATCAAACTTTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EARRTGWHEILWPSCPACFEESG*IKLCQA
Trigger: GGCCTGGCAAAGTTTGATTCATCCAGATTCCTCAAA...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGCGCATACTCATCTCTaGAAAGCTGGTCGTGATGAC +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDAHTHL*KAGRDD
Trigger: GTCATCACGACCAGCTTTTCAGAGATGAGTATGCGC...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp AGAACAAAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAATTCCACGGAGTTCACTaGGTCACTGTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RTKPTPNTLSHVGQRKPEFHGVH*VTVGRR
Trigger: CCTTCTCCCGACAGTGACTCAGTGAACTCCGTGGAA...TTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTTTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATTTCCACGGAGTTCACTaGGTCACTGTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDFHGVH*VTVGRR
Trigger: CCTTCTCCCGACAGTGACTCAGTGAACTCCGTGGAA...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTCTGGAAACTGCTGACTaGTGTGCGCTTGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGLETAD*CALART
Trigger: AGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAG...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVTWRAS*YGSSRC
Trigger: ACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGT...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTCCCTGGCCTCCTTCTaGTCTCTCTTTGTTAAAACG +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWSLASF*SLFVKT
Trigger: CGTTTTAACAAAGAGAGAGCAGAAGGAGGCCAGGGA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCACGACTGCAGAAAATCTaGCCACATAGTCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: TGWHEILWPSCPACVWIPRLQKI*PHSRQW
Trigger: CCATTGCCGACTATGTGGGCAGATTTTCTGCAGTCG...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR GCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPATSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAGGCAGCTCCTGATTTaGCTCCCCGGGCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVRQLLI*LPGPAR
Trigger: CCTGGCAGGCCCGGGGAGGCAAATCAGGAGCTGCCT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGTGTTCGGGGTTCACTTaGATCAAGCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQCSGFT*IKHRHR
Trigger: TCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACA...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTTCTGTACTCTGCAGTaGTCTATACAGCGCATACTC +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVFCTLQ*SIQRIL
Trigger: GAGTATGCGCTGTATAGACCACTGCAGAGTACAGAA...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGGTCTTTAAACCAGGATaGCTCAGAGTGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQVFKPG*LRVSFH
Trigger: GTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGAC...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGGTCTTTAAACCAGGATaGCTCAGAGTGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWVFKPG*LRVSFH
Trigger: GTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGAC...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATCTGTCCACTGTGGACTaGAAACTGCTGACTGATGTG +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDLSTVD*KLLTDV
Trigger: CACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGCTGTCCACTGTGGACTaGAAACTGCTGACTGATGTG +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVLSTVD*KLLTDV
Trigger: CACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGACAGGATCCCAGGGGATaGAACCTCCACCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRQDPRG*NLHRTA
Trigger: AGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTG...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATGTCCAGCCTGTGTTTaGATTCCAGATGGTGACTAC +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGCPACV*IPDGDY
Trigger: GTAGTCACCATCTGGAATCCAAACACAGGCTGGACA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGTGTCCAGCCTGTGTTTaGATTCCAGATGGTGACTAC +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQCPACV*IPDGDY
Trigger: GTAGTCACCATCTGGAATCCAAACACAGGCTGGACA...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
3UTR CAA 72 bp GGGTACTTGGAGGGCTTCTTGATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGGCTGATAGAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GYLEGFLIWKFT*SSSTFRLIEAA
Trigger: AGCCGCTTCTATCAGCCTGAACGTGGAGCTGGACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
3UTR CAA 72 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTaGTGCTATGTTCTTGATGCTTCACAGAGGCAACAG +
Preference number: 4 (lower is better)
Translates to: QRKHKGDPPGKL*CYVLDASQRQQ
Trigger: CTGTTGCCTCTGTGAAGCATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGTTTATAAGGTGTGGGTaGCCTAACAGACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQFIRCG*PNRLCP
Trigger: AGGACACAGTCTGTTAGGTCACCCACACCTTATAAA...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGTTTGAGGAATCTGGATaGATCAAACTTTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQFEESG*IKLCQA
Trigger: GGCCTGGCAAAGTTTGATTCATCCAGATTCCTCAAA...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTTGAGGAATCTGGATaGATCAAACTTTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGFEESG*IKLCQA
Trigger: GGCCTGGCAAAGTTTGATTCATCCAGATTCCTCAAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGACCAGATCTATCCAGTaGCAGGTTAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVTRSIQ*QVSNAG
Trigger: GCCAGCATTACTAACCTGTCACTGGATAGATCTGGT...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGGACAGATGTCTCATATaGAGGTACCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQDRCLI*RYHRRT
Trigger: GGTTCTCCTATGGTACCTTCATATGAGACATCTGTC...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAGCTGATAGAAGCGGCTaGGTCACTGTCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRADRSG*VTVHCG
Trigger: TCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGC...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp TTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCAGACCAATGACACGATaGTGTCCCTCCAAGATGATG +
Preference number: 4 (lower is better)
Translates to: FGILQHNCLLQSLWLLAARPMTR*CPSKMM
Trigger: CATCATCTTGGAGGGACATCATCGTGTCATTGGTCT...GGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTTGGATTCCAGATGGTaGCTACCTCCTACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWLDSRW*LPPTFL
Trigger: CAAAAAGGTAGGAGGTAGTCACCATCTGGAATCCAA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTGGATTCCAGATGGTaGCTACCTCCTACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGLDSRW*LPPTFL
Trigger: CAAAAAGGTAGGAGGTAGTCACCATCTGGAATCCAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGTGGGCATGGTGGTGCTaGGGGAGAAAACAAGAAATA +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVWAWWC*GRKQEI
Trigger: TATTTCTTGTTTTCTCCCTCAGCACCACCATGCCCA...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR GCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGTCCCTGGCCTCCTTCTaGTCTCTCTTTGTTAAAACG +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVSLASF*SLFVKT
Trigger: CGTTTTAACAAAGAGAGAGCAGAAGGAGGCCAGGGA...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp ACAATGATTCCGGTACAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGTCCCTGGCCTCCTTCTaGTCTCTCTTTGTTAAAACG +
Preference number: 4 (lower is better)
Translates to: TMIPVQVQRKHKGDPPGKSLASF*SLFVKT
Trigger: CGTTTTAACAAAGAGAGAGCAGAAGGAGGCCAGGGA...CTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTGTACCGGAATCATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVFPASS*TDTSLV
Trigger: AACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAA...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTATTCCTTTCCTACAATaGAGTTGGGATGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: EARRTGWHEILWPSCPACIPFLQ*SWDAFS
Trigger: TGAGAACGCATCCCAACTGCATTGTAGGAAAGGAAT...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAACGTCTTATCATCTGTaGCCATTTCATGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGTSYHL*PFHESA
Trigger: CGCAGACTCATGAAATGGCCACAGATGATAAGACGT...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGAGCAGAGTCCAGTGTTaGGGACGTCTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVSRVQC*GRLIIC
Trigger: ACAGATGATAAGACGTCCCCAACACTGGACTCTGCT...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTCCACATAGTCGGCAATaGTGTCTGCGCCTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGPHSRQ*CLRLKV
Trigger: AACCTTTAGGCGCAGACACCATTGCCGACTATGTGG...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR CCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGTGTTCGGGGTTCACTTaGATCAAGCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVCSGFT*IKHRHR
Trigger: TCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACA...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGTATGTTCGGTTAGCCTaGGGACTGACAGATGTCTCA +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVYVRLA*GLTDVS
Trigger: TGAGACATCTGTCAGTCCCCAGGCTAACCGAACATA...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCTACAATGCAGTTaGGATGCGTTCTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGFLQCS*DAFSTS
Trigger: ACTGGTTGAGAACGCATCCCAACTGCATTGTAGGAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTTCCTACAATGCAGTTaGGATGCGTTCTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWFLQCS*DAFSTS
Trigger: ACTGGTTGAGAACGCATCCCAACTGCATTGTAGGAA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCTGTACTCTGCAGTaGTCTATACAGCGCATACTC +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGFCTLQ*SIQRIL
Trigger: GAGTATGCGCTGTATAGACCACTGCAGAGTACAGAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp TTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCCTAAAGGCTCTTATCTaGCTTTTGGGATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FGILQHNCLLQSLWLLAALKALI*LLGSCS
Trigger: GCTGCAGGATCCCAAAAGCCAGATAAGAGCCTTTAG...GGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATCTGTGGCCATTTCATaGGTCTGCGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVSVAIS*VCASCP
Trigger: GGGGCAGGAGGCGCAGACTCATGAAATGGCCACAGA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGGAGTATTTGAGGTCTGTGGCCATTTCATaGGTCTGCGCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SQHPLAQIQVLLKEEYLRSVAIS*VCASCP
Trigger: GGGGCAGGAGGCGCAGACTCATGAAATGGCCACAGA...CCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAGTCCTCGAAGGGAGCTaGGGGCTGGTCCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGVLEGS*GLVQLP
Trigger: TGGAAGTTGGACCAGCCCTCAGCTCCCTTCGAGGAC...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCGTTTTAATACTGTGCTaGGGCTTCGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: FGILQHNCLLQSLWLLAAVLILC*GFEAEQ
Trigger: CTGTTCAGCTTCGAAGCCTCAGCACAGTATTAAAAC...GGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGAGAGCAAGCAGAATCTaGAAGAGCATTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQRASRI*KSIQVF
Trigger: GAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCT...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGACAGATGTCTCATATaGAGGTACCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDDRCLI*RYHRRT
Trigger: GGTTCTCCTATGGTACCTTCATATGAGACATCTGTC...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTTCGGATTAGCCAGTTaGCTAATTCCTTTCCTACAA +
Preference number: 4 (lower is better)
Translates to: ARRTGWHEILWPSCPACVFGLAS*LIPFLQ
Trigger: TTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAA...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDTWRAS*YGSSRC
Trigger: ACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGT...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp TTGCGTTCATCCTCAGTGGTCTCTGTCCTAACATATGTTCGGTTAGCCTGGGGAAGCTCCAGGTTGTTATaGTGCCAGCCCAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LRSSSVVSVLTYVRLAWGSSRLL*CQPKGV
Trigger: CACACCTTTGGGCTGGCATCATAACAACCTGGAGCT...TCCCCAGGCTAACCGAACATATGTTAGGACAGAGACCACTGAGGATGAACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CCAACAGGTGTTCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAAAGGGAGTGGCAACAATaGTTCCGGTACAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PTGVRGSLGSSTDTEQAEREWQQ*FRYRCK
Trigger: TTTGCACCTGTACCGGAATCATTGTTGCCACTCCCT...TTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAGATTACAGCAACGACTaGAGAAAATCTGCCCACATA +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGDYSND*RKSAHI
Trigger: TATGTGGGCAGATTTTCTGCAGTCGTTGCTGTAATC...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR GCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTTTTTCTACAATATGTaGAAGCTCGGAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWFFYNM*KLGGLL
Trigger: CAGGAGACCTCCGAGCTTGCACATATTGTAGAAAAA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308862.10
ENST00000407449.5
CDS-3UTR GCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGTTTTTCTACAATATGTaGAAGCTCGGAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQFFYNM*KLGGLL
Trigger: CAGGAGACCTCCGAGCTTGCACATATTGTAGAAAAA...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308862.10
ENST00000407449.5
CDS-3UTR GCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGTTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQFPASS*TDTSLV
Trigger: AACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAA...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTGTCCAGAAGAATTTTaGGTTCATCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RRTGWHEILWPSCPACVWCPEEF*VHPQWS
Trigger: AGACCACTGAGGATGAACGCAAAATTCTTCTGGACA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATGTCCAGAAGAATTTTaGGTTCATCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGCPEEF*VHPQWS
Trigger: AGACCACTGAGGATGAACGCAAAATTCTTCTGGACA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAATTCCTTTCCTACAATaGAGTTGGGATGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGIPFLQ*SWDAFS
Trigger: TGAGAACGCATCCCAACTGCATTGTAGGAAAGGAAT...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGACATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGCATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GAGCAGGAGATTTCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGGAACCTCCACCGTACTaGTCTTGGACAGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: EQEISQHPLAQIQVLLKEEPPPY*SWTAPS
Trigger: TGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTC...CTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAATCTCCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp ACAATGATTCCGGTACAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGTCAATTCCAGCAAACTaGTATCATCACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TMIPVQVQRKHKGDPPGKSIPAN*YHHRAE
Trigger: CTCTGCCCTGTGATGATAGCAGTTTGCTGGAATTGA...CTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTGTACCGGAATCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATTGCAAAGTCTCTGGCTaGTCGCTGCCTAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDCKVSG*SLPKAS
Trigger: AGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCA...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCATAAATGCAAAGAAATaGCACCTTGGAAGTTGCACA +
Preference number: 4 (lower is better)
Translates to: EEARRTGWHEILWPSCPAINAKK*HLGSCT
Trigger: TGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTAT...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAACGTCTTATCATCTGTaGCCATTTCATGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: TGWHEILWPSCPACVWIPTSYHL*PFHESA
Trigger: CGCAGACTCATGAAATGGCCACAGATGATAAGACGT...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp AAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAAGGACAGACGTCTTATCATCTGTaGCCATTTCATGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: KPTPNTLSHVGQRKPEGQTSYHL*PFHESA
Trigger: CGCAGACTCATGAAATGGCCACAGATGATAAGACGT...CTGTCCTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCAAGCAGAGTCCAGTGTTaGGGACGTCTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKASRVQC*GRLIIC
Trigger: ACAGATGATAAGACGTCCCCAACACTGGACTCTGCT...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAAAAATATGTTACGGCTaGCTTTCCTACTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGKICYG*LSYSQQ
Trigger: CTGTTGGGAGTAGGAAAGCCAGCCGTAACATATTTT...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTTATGTTCGGTTAGCCTaGGGACTGACAGATGTCTCA +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGYVRLA*GLTDVS
Trigger: TGAGACATCTGTCAGTCCCCAGGCTAACCGAACATA...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGTTCCTACAATGCAGTTaGGATGCGTTCTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVFLQCS*DAFSTS
Trigger: ACTGGTTGAGAACGCATCCCAACTGCATTGTAGGAA...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp AACAAAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAAGGGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NKTHTKYPQPRGTEEARREGFLI*KFTLSS
Trigger: GCTGGACAACGTGAACTTCCATATCAAGAAGCCCTC...CCTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGEGFLI*KFTLSS
Trigger: GCTGGACAACGTGAACTTCCATATCAAGAAGCCCTC...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACCACCGTACTGCTCTTaGACAGCCCCCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGPPYCS*TAPSCP
Trigger: AGGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR CAA 72 bp TGGCTTTCCTACTCCCAACAGGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAGAGCAAGCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: WLSYSQQVFGVH*DQAQTQSKQNL
Trigger: CAGATTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGGGAGTAGGAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp AACAAAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAAGGAAAGGGGGCTCATCTTaGTCAGGAGTCAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: NKTHTKYPQPRGTEEARRKGGSS*SGVKGL
Trigger: TAAACCTTTGACTCCTGATCAAGATGAGCCCCCTTT...CCTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTAAAGGGGGCTCATCTTaGTCAGGAGTCAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGKGGSS*SGVKGL
Trigger: TAAACCTTTGACTCCTGATCAAGATGAGCCCCCTTT...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTTTTATAAGGTGTGGGTaGCCTAACAGACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGFIRCG*PNRLCP
Trigger: AGGACACAGTCTGTTAGGTCACCCACACCTTATAAA...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATAGAGCAAGCAGAATCTaGAAGAGCATTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDRASRI*KSIQVF
Trigger: GAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCT...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp ACAATGATTCCGGTACAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGAGAGCAAGCAGAATCTaGAAGAGCATTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TMIPVQVQRKHKGDPPGKRASRI*KSIQVF
Trigger: GAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCT...CTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTGTACCGGAATCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCGGATTAGCCAGTTaGCTAATTCCTTTCCTACAA +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGFGLAS*LIPFLQ
Trigger: TTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp TTGCGTTCATCCTCAGTGGTCTCTGTCCTAACATATGTTCGGTTAGCCTGGGGAGCGCATACTCATCTCTaGAAAGCTGGTCGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LRSSSVVSVLTYVRLAWGAHTHL*KAGRDD
Trigger: GTCATCACGACCAGCTTTTCAGAGATGAGTATGCGC...TCCCCAGGCTAACCGAACATATGTTAGGACAGAGACCACTGAGGATGAACGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CCAACAGGTGTTCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAAGAAAGCGTCACTTATTaGGAGCTGTTGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PTGVRGSLGSSTDTEQAEESVTY*ELLSSS
Trigger: ACTGGAGGACAACAGCTCTCAATAAGTGACGCTTTC...TTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGACATCATCCTGGTTCTTaGCATCAGGTCGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRHHPGS*HQVGLS
Trigger: AGACAGTCCGACCTGATGTCAAGAACCAGGATGATG...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAGGGGGCCCTCCCACTaGCTGTTCAGACATGACTTC +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVRGPSH*LFRHDF
Trigger: GAAGTCATGTCTGAACAGTCAGTGGGAGGGCCCCCT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCATGTCCAGAAGAATTTTaGGTTCATCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TGWHEILWPSCPACVWIPCPEEF*VHPQWS
Trigger: AGACCACTGAGGATGAACGCAAAATTCTTCTGGACA...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp TTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTGTCCAGAAGAATTTTaGGTTCATCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FGILQHNCLLQSLWLLAACPEEF*VHPQWS
Trigger: AGACCACTGAGGATGAACGCAAAATTCTTCTGGACA...GGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAATTCCTTTCCTACAATaGAGTTGGGATGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TGWHEILWPSCPACVWIPIPFLQ*SWDAFS
Trigger: TGAGAACGCATCCCAACTGCATTGTAGGAAAGGAAT...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: GWHEILWPSCPACVWIPDTSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR GCA 90 bp CCAACAGGTGTTCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAACCGGGCAAGCTGTTGTaGTATGTTCTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: PTGVRGSLGSSTDTEQAEPGKLL*YVLDAS
Trigger: TGAAGCATCAAGAACATAGCACAACAGCTTGCCCGG...TTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTTTTCTACAATATGTaGAAGCTCGGAGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGFFYNM*KLGGLL
Trigger: TAGGAGACCTCCGAGCTTGCACATATTGTAGAAAAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTTTTACATTGGCTATCTaGCATCCAGTATTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EARRTGWHEILWPSCPACFTLAI*HPVLFQ
Trigger: CTGAAACAATACTGGATGCCAGATAGCCAATGTAAA...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR CCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTTTCTGTACTCTGCAGTaGTCTATACAGCGCATACTC +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGFCTLQ*SIQRIL
Trigger: GAGTATGCGCTGTATAGACCACTGCAGAGTACAGAA...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACAGGATCCCAGGGGATaGAACCTCCACCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVQDPRG*NLHRTA
Trigger: AGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAAAAGAAATGCCACCTTaGAAGTTGCACATTATGGGA +
Preference number: 4 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGKEMPP*KLHIMG
Trigger: TCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTT...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCATTCGGATTAGCCAGTTaGCTAATTCCTTTCCTACAA +
Preference number: 4 (lower is better)
Translates to: TGWHEILWPSCPACVWIPFGLAS*LIPFLQ
Trigger: TTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAA...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR TCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAGCTGATAGAAGCGGCTaGGTCACTGTCCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRADRSG*VTVHCG
Trigger: TCCACAGTGGACAGTGACTCAGCCGCTTCTATCAGC...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATCTTGGGTCATTCGACTaGTTCGTTCCAAAACTTGTG +
Preference number: 4 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDLGSFD*FVPKLV
Trigger: CACAAGTTTTGGAACGAATCAGTCGAATGACCCAAG...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGATAGAAGGCAGCTCCTaGTTTGCCTCCCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMIEGSS*FASPGL
Trigger: CAGGCCCGGGGAGGCAAATCAGGAGCTGCCTTCTAT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AACAAAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAAGGTTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NKTHTKYPQPRGTEEARRFPASS*TDTSLV
Trigger: AACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAA...CCTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR GCA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCATTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAFPASS*TDTSLV
Trigger: AACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAA...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCACCAGTAAACCTGCTCTaGAAAATAATCTCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAPVNLL*KIISGR
Trigger: TCTACCCGAGATTATTTTGCAGAGCAGGTTTACTGG...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTGCCTCCCCGGGCCTaGCAGGGTGATGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNLPPRA*QGDEWE
Trigger: CTCCCACTCATCACCCTGGCAGGCCCGGGGAGGCAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTGGTGCTGAGGCTGAAGAGCGCCGCTaGAGTTCCTCATTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: DVVPFKDYKLYTGHGGAEAEERR*SSSLSC
Trigger: GCAGCTTAATGAGGAACTCCAGCGGCGCTCTTCAGC...CTCAGCACCACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp TCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGGAGTATTTGAGGGCTGAAGAGCGCCGCTaGAGTTCCTCATTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQHPLAQIQVLLKEEYLRAEERR*SSSLSC
Trigger: GCAGCTTAATGAGGAACTCCAGCGGCGCTCTTCAGC...CCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTAAAATATGTTACGGCTaGCTTTCCTACTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: WHEILWPSCPACVWIPDGKICYG*LSYSQQ
Trigger: CTGTTGGGAGTAGGAAAGCCAGCCGTAACATATTTT...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CCA 90 bp CTCCAGGTTGTTATGATGCCAGCCCAAAGGTGTGAAAGGCAGCTCTTTGGATTTCTGTCCACTGTGGACTaGAAACTGCTGACTGATGTG +
Preference number: 4 (lower is better)
Translates to: LQVVMMPAQRCERQLFGFLSTVD*KLLTDV
Trigger: CACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...AAATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGCATCATAACAACCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGREGFLI*KFTLSS
Trigger: GCTGGACAACGTGAACTTCCATATCAAGAAGCCCTC...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp CTCCAGGTTGTTATGATGCCAGCCCAAAGGTGTGAAAGGCAGCTCTTTGGATTTCTATGGAGCAACTGCTaGAGTAGTGCCATCATGTGG +
Preference number: 4 (lower is better)
Translates to: LQVVMMPAQRCERQLFGFLWSNC*SSAIMW
Trigger: CCACATGATGGCACTACTCCAGCAGTTGCTCCATAG...AAATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGCATCATAACAACCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACACAGGGCTCAGCGTTaGCTCTGCGAGTATACTGGT +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRHRAQR*LCEYTG
Trigger: ACCAGTATACTCGCAGAGCCAACGCTGAGCCCTGTG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR CAA 72 bp TCCACTGTGGACTGGAAACTGCTGACTGATGTGCGCTaGCTAGGACTGGCAGAATTAGCCAAATTATCGTCA +
Preference number: 4 (lower is better)
Translates to: STVDWKLLTDVR*LGLAELAKLSS
Trigger: TGACGATAATTTGGCTAATTCTGCCAGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAGTCCACAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAAAAGGGGGCTCATCTTaGTCAGGAGTCAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRKGGSS*SGVKGL
Trigger: TAAACCTTTGACTCCTGATCAAGATGAGCCCCCTTT...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAGTCCTCGAAGGGAGCTaGGGGCTGGTCCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: PCYKCKEMPPWKLHIMGRVLEGS*GLVQLP
Trigger: TGGAAGTTGGACCAGCCCTCAGCTCCCTTCGAGGAC...TCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp CTATCCAGTGACAGGTTAGTAATGCTGGCTGATCTATTTCGAGCAGGAGATTTCGCTGTACGAGGGTCATaGCCTCCAAAGGTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSSDRLVMLADLFRAGDFAVRGS*PPKVGS
Trigger: AGAACCTACCTTTGGAGGTCATGACCCTCGTACAGC...GAAATCTCCTGCTCGAAATAGATCAGCCAGCATTACTAACCTGTCACTGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAGCCAGCCCAAAGGTGTaGAAGGCAGCTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGASPKV*KAALWI
Trigger: AATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGC...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAGCTCCAGGTTGTTATaGTGCCAGCCCAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVSSRLL*CQPKGV
Trigger: CACACCTTTGGGCTGGCATCATAACAACCTGGAGCT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATCAGGTCGGACTGTCTaGACAACCTGGCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGSGRTV*TTWQTN
Trigger: ATTGGTCTGCCAGGTTGTTCAGACAGTCCGACCTGA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCAAAGAATTCCCTTTCCTaGAGCACAATAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAKNSLS*STIGSM
Trigger: CATTGATCCTATTGTGCTTCAGGAAAGGGAATTCTT...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAACCGACTGCAGTTGCTaGGGGGTATCTACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGTDCSC*GVSTEE
Trigger: TTCCTCTGTAGATACCCCTCAGCAACTGCAGTCGGT...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CCAACAGGTGTTCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: PTGVRGSLGSSTDTEQAETSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...TTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCATCACTATGGAGCAACTaGTGGAGTAGTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSSLWSN*WSSAIM
Trigger: CATGATGGCACTACTCCAGCAGTTGCTCCATAGTGA...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGAACCTCCACCGTACTaGTCTTGGACAGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTEPPPY*SWTAPS
Trigger: TGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTC...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACGTCTTATCATCTGTaGCCATTTCATGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRTSYHL*PFHESA
Trigger: CGCAGACTCATGAAATGGCCACAGATGATAAGACGT...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TTCCTACAATGCAGTTGGGATGCGTTCTCAACCAGTAGCGGTGATCCTGAAACTTATGTTCGGTTAGCCTaGGGACTGACAGATGTCTCA +
Preference number: 4 (lower is better)
Translates to: FLQCSWDAFSTSSGDPETYVRLA*GLTDVS
Trigger: TGAGACATCTGTCAGTCCCCAGGCTAACCGAACATA...AGTTTCAGGATCACCGCTACTGGTTGAGAACGCATCCCAACTGCATTGTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCATCCATGTCATCATCCTaGTTCTTGACATCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSSMSSS*FLTSGR
Trigger: CCGACCTGATGTCAAGAACCAGGATGATGACATGGA...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAACAAGTGCCCAGGTGTaGTTTCGTAAGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVTSAQV*FRKQLV
Trigger: GACCAGCTGCTTACGAAACCACACCTGGGCACTTGT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACATCTTCGGAACTGCTaGCTGTATCTAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRHLRNC*LYLAQG
Trigger: CCCCTGAGCTAGATACAGCCAGCAGTTCCGAAGATG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGCTGAGGCTTCGAAGCTaGACAGCTGTACGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMLRLRS*TAVRGS
Trigger: TGACCCTCGTACAGCTGTTCAGCTTCGAAGCCTCAG...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATTTCGGATTAGCCAGTTaGCTAATTCCTTTCCTACAA +
Preference number: 4 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDFGLAS*LIPFLQ
Trigger: TTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAA...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACCTGGAAACTGCTGACTaGTGTGCGCTTGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDLETAD*CALART
Trigger: AGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAG...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GAGCAGTCAGATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTCTGGAAACTGCTGACTaGTGTGCGCTTGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: EQSDVVPFKDYKLYTGHGLETAD*CALART
Trigger: AGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAG...ACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATCTGACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACAACCTGGCAGACCAATaGCACGATGATGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDNLADQ*HDDVPP
Trigger: TGGAGGGACATCATCGTGTCATTGGTCTGCCAGGTT...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACCTTCCATTCATGCCCTaGAGTCCAGAGAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDLPFMP*SPERSL
Trigger: CAGGGATCTCTCTGGACTTCAGGGCATGAATGGAAG...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTCCCTGCTGTCCCTCTaGAGAAGGACAACATTCCAG +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDSLLSL*RRTTFQ
Trigger: CTGGAATGTTGTCCTTCTTCAGAGGGACAGCAGGGA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACGACTGCAGAAAATCTaGCCACATAGTCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVRLQKI*PHSRQW
Trigger: CCATTGCCGACTATGTGGGCAGATTTTCTGCAGTCG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp ATGTCCTGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGATTTTTCTACAATATGTaGAAGCTCGGAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MSWAIRDTVFSTRTKVGRFFYNM*KLGGLL
Trigger: CAGGAGACCTCCGAGCTTGCACATATTGTAGAAAAA...TCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCAGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAGCCCTTGTGGCAATATaGCCATTTCGGATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRALVAI*PFRISQ
Trigger: CTGGCTAATCCGAAATGGGCATATTGCCACAAGGGC...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTATCCAGTGACAGGTTAGTAATGCTGGCTGATCTATTTCGAGCAGGAGATTTCGCCCTTGTGGCAATATaGCCATTTCGGATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSSDRLVMLADLFRAGDFALVAI*PFRISQ
Trigger: CTGGCTAATCCGAAATGGGCATATTGCCACAAGGGC...GAAATCTCCTGCTCGAAATAGATCAGCCAGCATTACTAACCTGTCACTGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp CTATCCAGTGACAGGTTAGTAATGCTGGCTGATCTATTTCGAGCAGGAGATTTCTGCAGCACAACTGTTTaGTGCAAAGTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSDRLVMLADLFRAGDFCSTTV*CKVSGC
Trigger: GCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCA...GAAATCTCCTGCTCGAAATAGATCAGCCAGCATTACTAACCTGTCACTGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGCTCAGCGTTGGCTCTaGGAGTATACTGGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMAQRWL*EYTGAH
Trigger: ATGGGCACCAGTATACTCGCAGAGCCAACGCTGAGC...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATTCCTTCTCGCAGACTaGAATGGGCACTCGTTCATG +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGFLLAD*NGHSFM
Trigger: CATGAACGAGTGCCCATTGCAGTCTGCGAGAAGGAA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACATCGGGGCTTTTCCCTaGTGTCCCTCTGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDIGAFP*CPSEEG
Trigger: TCCTTCTTCAGAGGGACAGCAGGGAAAAGCCCCGAT...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATTGCCCAGGCTGGAATaGAATGGTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGLPRLE*NGVIPA
Trigger: AGCTGGGATTACACCATTGCATTCCAGCCTGGGCAA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GAGCAGTCAGATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTAAGGGAGCTGAGGGCTaGTCCAACTTCCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: EQSDVVPFKDYKLYTGHGKGAEG*SNFHSK
Trigger: CTTTGAGTGGAAGTTGGACCAGCCCTCAGCTCCCTT...ACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATCTGACTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACCACATAGTCGGCAATaGTGTCTGCGCCTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGPHSRQ*CLRLKV
Trigger: AACCTTTAGGCGCAGACACCATTGCCGACTATGTGG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCAAAAGCAACCTCTCCATaGCTTGTTTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSKATSP*LVSPHS
Trigger: AGAATGGGGAGAAACAAGCCATGGAGAGGTTGCTTT...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp CCAACAGGTGTTCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAAATCACTAAATCACCTTaGGTCATTCGACTGATTCGT +
Preference number: 4 (lower is better)
Translates to: PTGVRGSLGSSTDTEQAEITKSP*VIRLIR
Trigger: ACGAATCAGTCGAATGACCCAAGGTGATTTAGTGAT...TTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAGAATTCTTCCTCCTCTaGCTCGATAATCGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNREFFLL*LDNRPA
Trigger: TGCTGGCCGATTATCGAGCCAGAGGAGGAAGAATTC...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATCACTTGGCTGTCTGTaGATCCCAGCAAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVSLGCL*IPANAH
Trigger: ATGGGCATTTGCTGGGATCCACAGACAGCCAAGTGA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACGGAGACACCACTGTTaGCATTTTACCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRRRHHC*HFTLST
Trigger: GGTGGACAAGGTAAAATGCCAACAGTGGTGTCTCCG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACCCAAGCCTGTCCAGTaGTCTGGTACCATTAGGAAA +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVPKPVQ*SGTIRK
Trigger: TTTCCTAATGGTACCAGACCACTGGACAGGCTTGGG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GAGCAGGAGATTTCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGTTTGAGGAATCTGGATaGATCAAACTTTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EQEISQHPLAQIQVLLKEFEESG*IKLCQA
Trigger: GGCCTGGCAAAGTTTGATTCATCCAGATTCCTCAAA...CTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAATCTCCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp TCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGGAGTATTTGAGGACCAGATCTATCCAGTaGCAGGTTAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: SQHPLAQIQVLLKEEYLRTRSIQ*QVSNAG
Trigger: GCCAGCATTACTAACCTGTCACTGGATAGATCTGGT...CCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGCGCATACTCATCTCTaGAAAGCTGGTCGTGATGAC +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDAHTHL*KAGRDD
Trigger: GTCATCACGACCAGCTTTTCAGAGATGAGTATGCGC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCCTGGAAACTGCTGACTaGTGTGCGCTTGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLLETAD*CALART
Trigger: AGTCCTAGCAAGCGCACATCAGTCAGCAGTTTCCAG...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp TACAATGCAGTTGGGATGCGTTCTCAACCAGTAGCGGTGATCCTGAAACTCCATTTGATGTGGACAAACTaGCGGATATCCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: YNAVGMRSQPVAVILKLHLMWTN*RISMSS
Trigger: TGATGACATGGATATCCGTCAGTTTGTCCACATCAA...ATGGAGTTTCAGGATCACCGCTACTGGTTGAGAACGCATCCCAACTGCATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGTCCAGAGAGATCCCTaGGCAGCTGTTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEVQRDP*AAVSSS
Trigger: GGAGGAAGAAACAGCTGCTCAGGGATCTCTCTGGAC...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGGCAGAAGAGCTGCTaGAGAGCACACAAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMGQKSC*RAHKVS
Trigger: AGAGACTTTGTGTGCTCTTCAGCAGCTCTTCTGCCC...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAACAAAGCGCCGAATATaGTGTACCATGGGGGTATCA +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGTKRRI*CTMGVS
Trigger: TGATACCCCCATGGTACATCATATTCGGCGCTTTGT...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATTTCTTGGCAATGAGTaGCTCAAAGACCGACTGCAG +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGFLGNE*LKDRLQ
Trigger: CTGCAGTCGGTCTTTGAGTCACTCATTGCCAAGAAA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAGGACTTGGAGGAACTaGAGGTCTCTTTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVRTWRN*RSLSTL
Trigger: AAGGGTAGAAAGAGACCTTCAGTTCCTCCAAGTCCT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGTAGGCAATTGGAGATaGGTAGAACTGGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDVGNWR*VELVEL
Trigger: GAGCTCCACCAGTTCTACTCATCTCCAATTGCCTAC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp TCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGATTCCTTTCCTACAATaGAGTTGGGATGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SYLAFGILQHNCLLQSLWIPFLQ*SWDAFS
Trigger: TGAGAACGCATCCCAACTGCATTGTAGGAAAGGAAT...CCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCACATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATCACTATGGAGCAACTaGTGGAGTAGTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGSLWSN*WSSAIM
Trigger: CATGATGGCACTACTCCAGCAGTTGCTCCATAGTGA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTGCAAAGTCTCTGGCTaGTCGCTGCCTAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDCKVSG*SLPKAS
Trigger: AGATGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAACACATCTTCGGAACTaGTGGCTGTATCTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGTHLRN*WLYLAQ
Trigger: CTGAGCTAGATACAGCCAGCAGTTCCGAAGATGTGT...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGAAGAGCGCCGCTaGAGTTCCTCATTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEAEERR*SSSLSC
Trigger: GCAGCTTAATGAGGAACTCCAGCGGCGCTCTTCAGC...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATGTTCGGGGTTCACTTaGATCAAGCACAGACACAGA +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVCSGFT*IKHRHR
Trigger: TCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATATGTTCGGTTAGCCTaGGGACTGACAGATGTCTCA +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGYVRLA*GLTDVS
Trigger: TGAGACATCTGTCAGTCCCCAGGCTAACCGAACATA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAGTCTTTAAACCAGGATaGCTCAGAGTGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGVFKPG*LRVSFH
Trigger: GTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGAC...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGCCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGATGTAGTTCCTTTTGTCTTTAAACCAGGATaGCTCAGAGTGTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CHLGSCTLWEEQSDVVPFVFKPG*LRVSFH
Trigger: GTGGAAGGACACTCTGAGCCATCCTGGTTTAAAGAC...AAAAGGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp AAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGACTGTCCACTGTGGACTaGAAACTGCTGACTGATGTG +
Preference number: 4 (lower is better)
Translates to: KCKEMPPWKLHIMGRAVRLSTVD*KLLTDV
Trigger: CACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...TCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp TCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGGGTTTCGTAAGCAGCTaGTCCATTGACATCACTAAA +
Preference number: 4 (lower is better)
Translates to: SYLAFGILQHNCLLQSLWGFVSS*SIDITK
Trigger: TTTAGTGATGTCAATGGACCAGCTGCTTACGAAACC...CCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACTAAAGGCTCTTATCTaGCTTTTGGGATCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRLKALI*LLGSCS
Trigger: GCTGCAGGATCCCAAAAGCCAGATAAGAGCCTTTAG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACATTCTACCCAAGCTCTaGCTATCGCCCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDILPKL*LSPRCS
Trigger: TGAGCATCTGGGCGATAGCCAGAGCTTGGGTAGAAT...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAGATAATCATGATGGATaGAGTGACCACAGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRDNHDG*SDHRAQ
Trigger: CTGAGCCCTGTGGTCACTCCATCCATCATGATTATC...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGATGGTGGAGCTCTGGCTaGACAAAGTTGTTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRWWSSG*TKLLRS
Trigger: GCTTCTTAACAACTTTGTCCAGCCAGAGCTCCACCA...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAAGCCACCCAAGTAGTTaGGGTTACAGGTATATGCCA +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRSHPSS*GYRYMP
Trigger: TGGCATATACCTGTAACCCCAACTACTTGGGTGGCT...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AGAATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTGCCAGAAGGACAGGCTaGCATGAGATCCTATGGCCC +
Preference number: 4 (lower is better)
Translates to: RIEQNIHVINAKKCHLGSARRTG*HEILWP
Trigger: GGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC...ACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
3UTR CAA 72 bp ACTAACACAATCCAGCCAACGTCCATCAACCATTGCTaGTCCAATTGCTATAGCTTGTGCCCTTGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TNTIQPTSINHC*SNCYSLCPCGN
Trigger: ATTGCCACAAGGGCACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGATTGTGTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAAAAGGGGGCTCATCTTaGTCAGGAGTCAAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGKGGSS*SGVKGL
Trigger: TAAACCTTTGACTCCTGATCAAGATGAGCCCCCTTT...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAGTTTTAATACTGTGCTaGGGCTTCGAAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRVLILC*GFEAEQ
Trigger: CTGTTCAGCTTCGAAGCCTCAGCACAGTATTAAAAC...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATTTCCAGGGATTTCTTaGTTACAGCAACGACTGCAG +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVFPGIS*LQQRLQ
Trigger: CTGCAGTCGTTGCTGTAATCAAGAAATCCCTGGAAA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGATTTGAGGAATCTGGATaGATCAAACTTTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRFEESG*IKLCQA
Trigger: GGCCTGGCAAAGTTTGATTCATCCAGATTCCTCAAA...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAGACAGATGTCTCATATaGAGGTACCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGDRCLI*RYHRRT
Trigger: GGTTCTCCTATGGTACCTTCATATGAGACATCTGTC...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTCCACGGAGTTCACTaGGTCACTGTCGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFHGVH*VTVGRR
Trigger: CCTTCTCCCGACAGTGACTCAGTGAACTCCGTGGAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TGCCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGATGTAGTTCCTTTTACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: CHLGSCTLWEEQSDVVPFTWRAS*YGSSRC
Trigger: ACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGT...AAAAGGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACTTGGGTCATTCGACTaGTTCGTTCCAAAACTTGTG +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRLGSFD*FVPKLV
Trigger: CACAAGTTTTGGAACGAATCAGTCGAATGACCCAAG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAGCCTCCTCTTAGCTTaGTTGTACAGCCTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTSLLLA*LYSLGA
Trigger: AGCACCTAGGCTGTACAATCAAGCTAAGAGGAGGCT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TGCCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGATGTAGTTCCTTTTTTGGATTCCAGATGGTaGCTACCTCCTACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: CHLGSCTLWEEQSDVVPFLDSRW*LPPTFL
Trigger: CAAAAAGGTAGGAGGTAGTCACCATCTGGAATCCAA...AAAAGGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR GCA 90 bp GAGCAGGAGATTTCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGATTGTACAGCCTAGGTaGTGTGGACAACCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: EQEISQHPLAQIQVLLKEIVQPR*CGQPSK
Trigger: TTTTGAAGGTTGTCCACAGCACCTAGGCTGTACAAT...CTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAATCTCCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAGCACAACTGTTTGCTaGAAAGTCTCTGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTSTTVC*KVSGCS
Trigger: CGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCAGCACAACTGTTTGCTaGAAAGTCTCTGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLSTTVC*KVSGCS
Trigger: CGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCT...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTGGCTTTTGGGATCCTaGAGCACAACTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMWLLGS*STTVCC
Trigger: GCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCTGGCTTTTGGGATCCTaGAGCACAACTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLWLLGS*STTVCC
Trigger: GCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCA...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR GCA 90 bp GAGCAGTCAGATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTTGCCACCTTGGAAGTTaGACATTATGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: EQSDVVPFKDYKLYTGHGCHLGS*TLWEEQ
Trigger: CTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCA...ACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATCTGACTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAAGGGAGCTGAGGGCTaGTCCAACTTCCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEKGAEG*SNFHSK
Trigger: CTTTGAGTGGAAGTTGGACCAGCCCTCAGCTCCCTT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATTCAGGTCACTATCCTaGCTTTTCCCCTCCATGATT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGFRSLS*LFPSMI
Trigger: AATCATGGAGGGGAAAAGCCAGGATAGTGACCTGAA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GAGCAGGAGATTTCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGAAAATATGTTACGGCTaGCTTTCCTACTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: EQEISQHPLAQIQVLLKEKICYG*LSYSQQ
Trigger: CTGTTGGGAGTAGGAAAGCCAGCCGTAACATATTTT...CTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAATCTCCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATTCCTACAATGCAGTTaGGATGCGTTCTCAACCAGT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVFLQCS*DAFSTS
Trigger: ACTGGTTGAGAACGCATCCCAACTGCATTGTAGGAA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATTCTGTACTCTGCAGTaGTCTATACAGCGCATACTC +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVFCTLQ*SIQRIL
Trigger: GAGTATGCGCTGTATAGACCACTGCAGAGTACAGAA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACACAATCCAGCCAACGTCCATCAACCATTGCTTGTCCAATTGCTATAGCTTGTTTCTGTACTCTGCAGTaGTCTATACAGCGCATACTC +
Preference number: 4 (lower is better)
Translates to: TQSSQRPSTIACPIAIACFCTLQ*SIQRIL
Trigger: GAGTATGCGCTGTATAGACCACTGCAGAGTACAGAA...ACAAGCTATAGCAATTGGACAAGCAATGGTTGATGGACGTTGGCTGGATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAAAGCAACCTCTCCATaGCTTGTTTCTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVKATSP*LVSPHS
Trigger: AGAATGGGGAGAAACAAGCCATGGAGAGGTTGCTTT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATCGGAATGTGATTACTaGGGAGATACAGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVSECDY*GDTEDH
Trigger: GTGATCCTCTGTATCTCCCCAGTAATCACATTCCGA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAAGTCGAGGAAGGACTaGACTTCCAGACGAGGCATT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTKSRKD*TSRRGI
Trigger: AATGCCTCGTCTGGAAGTCCAGTCCTTCCTCGACTT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTTTTGGCCAACGCCGTaGGCCTCTTTTGTTGAACAG +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMFWPTP*ASFVEQ
Trigger: CTGTTCAACAAAAGAGGCCCACGGCGTTGGCCAAAA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGAAACTCCAAGAATTTTaGCCAACGCCGTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMKLQEF*PTPWAS
Trigger: AGAGGCCCACGGCGTTGGCCAAAATTCTTGGAGTTT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGCAGGCTGGAATGCAATaGTGTAATCCCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMQAGMQ*CNPSSL
Trigger: CAGTGAGCTGGGATTACACCATTGCATTCCAGCCTG...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACAGAAGCCATTCCTGTaGAGCATTCCTGCTATGCAC +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTQKPFL*SIPAMH
Trigger: GTGCATAGCAGGAATGCTCCACAGGAATGGCTTCTG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACGCTGTACGAGGGTCATaGCCTCCAAAGGTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNAVRGS*PPKVGS
Trigger: AGAACCTACCTTTGGAGGTCATGACCCTCGTACAGC...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDTWRAS*YGSSRC
Trigger: ACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGT...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAACATCATCCTGGTTCTTaGCATCAGGTCGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEHHPGS*HQVGLS
Trigger: AGACAGTCCGACCTGATGTCAAGAACCAGGATGATG...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACTACAGAGGAAGACATaGGCCTTGCTTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTLQRKT*ALLASS
Trigger: AGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTAG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATTTGTTTCTTGGCAATaGGTGACTCAAAGACCGACT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGFVSWQ*VTQRPT
Trigger: AGTCGGTCTTTGAGTCACTCATTGCCAAGAAACAAA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATCGGCACTGTTCCACTaGGTCGCTTTAGACAATTCC +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHESALFH*VALDNS
Trigger: GGAATTGTCTAAAGCGACTCAGTGGAACAGTGCCGA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGGAGAGGGAACGAATaGAATCTTCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMGRGNE*NLLHCC
Trigger: ACAGCAGTGAAGAAGATTTCATTCGTTCCCTCTCCC...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTACTTCAAGTGCTCATaGCTAGGGGAGTACAGGAAA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDYFKCS*LGEYRK
Trigger: TTTCCTGTACTCCCCTAGTCATGAGCACTTGAAGTA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATCCCTGGCCTCCTTCTaGTCTCTCTTTGTTAAAACG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTSLASF*SLFVKT
Trigger: CGTTTTAACAAAGAGAGAGCAGAAGGAGGCCAGGGA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAATTCCTTTCCTACAATaGAGTTGGGATGCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVIPFLQ*SWDAFS
Trigger: TGAGAACGCATCCCAACTGCATTGTAGGAAAGGAAT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGTSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAACAGAGGCAACAGCCTaGGGAAGATTTTTATTTTCC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRTEATA*GRFLFS
Trigger: GGAAAATAAAAATCTTCCGCAGGCTGTTGCCTCTGT...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGCCGGGCAAGCTGTTGTaGTATGTTCTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMPGKLL*YVLDAS
Trigger: TGAAGCATCAAGAACATAGCACAACAGCTTGCCCGG...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAGGGTATCACAGAACATaGTTGGACACTGATAAGAAG +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGGYHRT*LDTDKK
Trigger: CTTCTTATCAGTGTCCAAGCATGTTCTGTGATACCC...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGGAAGACATGAGCCTTaGTTGCATCTTCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDGRHEP*LHLLNP
Trigger: TGGATTGAGAAGATGCAAGCAAGGCTCATGTCTTCC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAACTGTCCACTGTGGACTaGAAACTGCTGACTGATGTG +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHELSTVD*KLLTDV
Trigger: CACATCAGTCAGCAGTTTCCAGTCCACAGTGGACAG...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAACTATGGAGCAACTGCTaGAGTAGTGCCATCATGTGG +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHELWSNC*SSAIMW
Trigger: CCACATGATGGCACTACTCCAGCAGTTGCTCCATAG...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGACAGTGAGTCACTATaGAGCAACTGCTGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTDSESL*SNCWSS
Trigger: ACTACTCCAGCAGTTGCTCCATAGTGACTCACTGTC...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTCCATGTCATCATCCTaGTTCTTGACATCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMSMSSS*FLTSGR
Trigger: CCGACCTGATGTCAAGAACCAGGATGATGACATGGA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTCCAATAACATGTCCTaGGCAATCCGAGACACTGTT +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDSNNMS*AIRDTV
Trigger: AACAGTGTCTCGGATTGCCCAGGACATGTTATTGGA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAGGTTTCGTAAGCAGCTaGTCCATTGACATCACTAAA +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRGFVSS*SIDITK
Trigger: TTTAGTGATGTCAATGGACCAGCTGCTTACGAAACC...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACCCTCAATCAGGGAATaGAATGAAGGGTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGPSIRE*NEGFCI
Trigger: AATGCAAAACCCTTCATTCCATTCCCTGATTGAGGG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAAAGGGTCTGAATTTTTaGGCTGAATTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRKGLNF*AEFFLL
Trigger: GAGGAGGAAGAATTCAGCCCAAAAATTCAGACCCTT...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAGAATATGATGTACCATaGGGGTATCACAGAACATGC +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVEYDVP*GYHRTC
Trigger: GCATGTTCTGTGATACCCCCATGGTACATCATATTC...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGCTACCCTTTTCCTGTTaGAAAAGGTCCTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMLPFSC*KRSCNL
Trigger: CAGGTTGCAGGACCTTTTCCAACAGGAAAAGGGTAG...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGAACTGGTGGAGCTCTaGCTGGACAAAGTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTELVEL*LDKVVK
Trigger: CTTAACAACTTTGTCCAGCCAGAGCTCCACCAGTTC...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGAGACATGACTTCAGGTaGCGTAGGCAATTGGAGATG +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMRHDFR*RRQLEM
Trigger: CATCTCCAATTGCCTACGCCACCTGAAGTCATGTCT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACATGTAGCTTATTTTTaGTCCTTTGTTCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGHVAYF*SFVPVP
Trigger: GGGGACAGGAACAAAGGACCAAAAATAAGCTACATG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTGGTGCTGAGGGAAGTTGCACATTATaGGAAGAGCAGTCAGATGTA +
Preference number: 4 (lower is better)
Translates to: DVVPFKDYKLYTGHGGAEGSCTL*EEQSDV
Trigger: TACATCTGACTGCTCTTCCCATAATGTGCAACTTCC...CTCAGCACCACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCTTTATAAGGTGTGGGTaGCCTAACAGACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLFIRCG*PNRLCP
Trigger: AGGACACAGTCTGTTAGGTCACCCACACCTTATAAA...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGAAAGCGTCACTTATTaGGAGCTGTTGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEESVTY*ELLSSS
Trigger: ACTGGAGGACAACAGCTCTCAATAAGTGACGCTTTC...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTTGATGTGGACAAACTaGCGGATATCCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDLMWTN*RISMSS
Trigger: TGATGACATGGATATCCGTCAGTTTGTCCACATCAA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACAGGGAGTGGCAACAATaGTTCCGGTACAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNREWQQ*FRYRCK
Trigger: TTTGCACCTGTACCGGAATCATTGTTGCCACTCCCT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAGGGTTCTCGGAATGTaGTTACTGGGGAGATACAGA +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHERVLGM*LLGRYR
Trigger: TCTGTATCTCCCCAGTAATCACATTCCGAGAACCCT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAATGAGCAAAAGGGTCTaGATTTTTGGGCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRMSKRV*IFGLNS
Trigger: AGAATTCAGCCCAAAAATTCAGACCCTTTTGCTCAT...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAGATGCATCCTTTGAATaGGCAAAAGGGTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGDASFE*AKGSEF
Trigger: AAATTCAGACCCTTTTGCTCATTCAAAGGATGCATC...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACACAGTCCACCTTTGTTaGCCACACAGCATCACTCAG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNTVHLC*PHSITQ
Trigger: CTGAGTGATGCTGTGTGGTCAACAAAGGTGGACTGT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATGCCATCACAAAAGCTaGTATCGATATAACCCTACT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGCHHKS*YRYNPT
Trigger: AGTAGGGTTATATCGATATCAGCTTTTGTGATGGCA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCCTGGTCCGTTTTATaGTCAGGCTCATTCACAACA +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEAWSVL*SGSFTT
Trigger: TGTTGTGAATGAGCCTGATCATAAAACGGACCAGGC...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATCAATTCCAGCAAACTaGTATCATCACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTSIPAN*YHHRAE
Trigger: CTCTGCCCTGTGATGATAGCAGTTTGCTGGAATTGA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTGCAGCACAACTGTTTaGTGCAAAGTCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNCSTTV*CKVSGC
Trigger: GCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACCCAGTAAACCTGCTCTaGAAAATAATCTCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDPVNLL*KIISGR
Trigger: TCTACCCGAGATTATTTTGCAGAGCAGGTTTACTGG...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGACATGAGCCTTGCTTaGATCTTCTCAATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTDMSLA*IFSIQF
Trigger: GAACTGGATTGAGAAGATGCAAGCAAGGCTCATGTC...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGCCATCGCACTTATCTTaGTTTCTTCCCCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMPSHLS*FLPLVS
Trigger: TGAGACAAGGGGAAGAAAGCAAGATAAGTGCGATGG...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATCCTGGAAGCAAATTTaGAAAGATGGCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVSWKQI*KDGFHG
Trigger: ACCATGAAAGCCATCTTTGCAAATTTGCTTCCAGGA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACAAATCAAAAACCTGTaGCATCTTTCTCCCGTAGAA +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRQIKNL*HLSPVE
Trigger: TTCTACGGGAGAAAGATGGCACAGGTTTTTGATTTG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAAGTCCTTGGTCAACTTaGTTCCAGTTCAAAACAAAC +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRSPWST*FQFKTN
Trigger: GTTTGTTTTGAACTGGAAGCAAGTTGACCAAGGACT...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAACGTCTTATCATCTGTaGCCATTTCATGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTTSYHL*PFHESA
Trigger: CGCAGACTCATGAAATGGCCACAGATGATAAGACGT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAGCAGAGTCCAGTGTTaGGGACGTCTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHESRVQC*GRLIIC
Trigger: ACAGATGATAAGACGTCCCCAACACTGGACTCTGCT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAGAGCAGAGTCCAGTGTTaGGGACGTCTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: HVINAKKCHLGSCTLWEESRVQC*GRLIIC
Trigger: ACAGATGATAAGACGTCCCCAACACTGGACTCTGCT...CTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGAGGGCTTCTTGATATaGAAGTTCACGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEEGFLI*KFTLSS
Trigger: GCTGGACAACGTGAACTTCCATATCAAGAAGCCCTC...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TCTTATCTGGCTTTTGGGATCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGTGTAGAGATACTCAATaGAACACTTCAACAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SYLAFGILQHNCLLQSLWCRDTQ*NTSTEE
Trigger: TTCTTCTGTTGAAGTGTTCCATTGAGTATCTCTACA...CCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGATTCCAGAAGCCTTTTTaGTTGGTTGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRFQKPF*LVVVLF
Trigger: AAACAGAACCACAACCAACCAAAAAGGCTTCTGGAA...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACAAGGTCTCTCTCTTCTaGGAAGAGAGATCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNKVSLF*EERSGL
Trigger: AAGCCCCGATCTCTCTTCCCAGAAGAGAGAGACCTT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAAATGGGAGTCACTATaGATCGAGGTTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTKWESL*IEVLST
Trigger: TGTGCTGAGAACCTCGATCCATAGTGACTCCCATTT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTGGCTAGAAAGGAAATaGGAGTCACTATGGATCGAG +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMWLERK*ESLWIE
Trigger: CTCGATCCATAGTGACTCCCATTTCCTTTCTAGCCA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAGAACTGAAAAGCCTTaGCATACAGTGGTGAACACG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTRTEKP*HTVVNT
Trigger: CGTGTTCACCACTGTATGCCAAGGCTTTTCAGTTCT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
3UTR CAA 72 bp CCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTaGCACATTATGGGAAGAGCAGTCAGATGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PCYKCKEMPPWK*HIMGRAVRCSS
Trigger: GGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAGAGCAAGCAGAATCTaGAAGAGCATTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTRASRI*KSIQVF
Trigger: GAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACACCAGATCTATCCAGTaGCAGGTTAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNTRSIQ*QVSNAG
Trigger: GCCAGCATTACTAACCTGTCACTGGATAGATCTGGT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AGAATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTACCAGATCTATCCAGTaGCAGGTTAGTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: RIEQNIHVINAKKCHLGSTRSIQ*QVSNAG
Trigger: GCCAGCATTACTAACCTGTCACTGGATAGATCTGGT...ACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACAGACCAATGACACGATaGTGTCCCTCCAAGATGATG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNRPMTR*CPSKMM
Trigger: CATCATCTTGGAGGGACATCATCGTGTCATTGGTCT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAAGGTATTTTGCAAATaGCATAGACCAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVKVFCK*HRPGLI
Trigger: AATGAGTCCTGGTCTATGTCATTTGCAAAATACCTT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACAAGTCCTTCAGATCCTaGAGAAGGGACACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDKSFRS*RRDTFN
Trigger: ATTAAAAGTGTCCCTTCTTCAGGATCTGAAGGACTT...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACCTTGGCATTAGCATCTaGAAATTGAAGTTCCACATG +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDLGISI*KLKFHM
Trigger: CATGTGGAACTTCAATTTTCAGATGCTAATGCCAAG...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAGACACTTTACCTCTGTaGATAAAACAAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGDTLPL*IKQVFP
Trigger: AGGAAACACTTGTTTTATTCACAGAGGTAAAGTGTC...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAATATACTCTAGGCCTTaGAGGAAAGGGAAACAGTCA +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTIYSRP*RKGKQS
Trigger: TGACTGTTTCCCTTTCCTTCAAGGCCTAGAGTATAT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AGAATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTCCCTGGCCTCCTTCTaGTCTCTCTTTGTTAAAACG +
Preference number: 4 (lower is better)
Translates to: RIEQNIHVINAKKCHLGSSLASF*SLFVKT
Trigger: CGTTTTAACAAAGAGAGAGCAGAAGGAGGCCAGGGA...ACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATTTTTCTACAATATGTaGAAGCTCGGAGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTFFYNM*KLGGLL
Trigger: CAGGAGACCTCCGAGCTTGCACATATTGTAGAAAAA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATTCCCAGCATCCTCTTaGACAGATACAAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTFPASS*TDTSLV
Trigger: AACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACTGGTGTTACCTGTTTaGAGATTCTACACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTLVLPV*RFYTRN
Trigger: ATTCCTGGTGTAGAATCTGCAAACAGGTAACACCAG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGAAATACTTGTCCATTaGCTCACAAAACCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDEILVH*LTKPSP
Trigger: AGGACTAGGTTTTGTGAGGCAATGGACAAGTATTTC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACCTGTGGAGCATTCCTaGTATGCACATAGAATTGAA +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTPVEHS*YAHRIE
Trigger: TTCAATTCTATGTGCATAGCAGGAATGCTCCACAGG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAATGAGAGATTACCTTTaGAAGGCAGCAACTATTGTT +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRMRDYL*KAATIV
Trigger: AACAATAGTTGCTGCCTTGCAAAGGTAATCTCTCAT...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATGGAGAAATATTCCGTaGAGATGCATCCATCGCACT +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEWRNIP*RCIHRT
Trigger: AGTGCGATGGATGCATCTCCACGGAATATTTCTCCA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACAAAAACAGGCAAGCTaGAAAGATAAACAACATGAC +
Preference number: 4 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGQKQAS*KDKQHD
Trigger: GTCATGTTGTTTATCTTTCCAGCTTGCCTGTTTTTG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTTATAAGGTGTGGGTaGCCTAACAGACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFIRCG*PNRLCP
Trigger: AGGACACAGTCTGTTAGGTCACCCACACCTTATAAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp CCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAAGAGCAAGCAGAATCTaGAAGAGCATTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PCYKCKEMPPWKLHIMGRRASRI*KSIQVF
Trigger: GAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCT...TCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp AAGAATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGGACAGATGTCTCATATaGAGGTACCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: KNRAEHPCYKCKEMPPWKDRCLI*RYHRRT
Trigger: GGTTCTCCTATGGTACCTTCATATGAGACATCTGTC...CTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACTTTGGTCTGCTATCTaGAGTACTATTTGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTLWSAI*STICWK
Trigger: CTTCCAACAAATAGTACTTCAGATAGCAGACCAAAG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAACGTCCATCAACCATTaGTTGTCCAATTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: PCYKCKEMPPWKLHIMGRTSINH*LSNCYS
Trigger: GCTATAGCAATTGGACAAGCAATGGTTGATGGACGT...TCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR GCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAATCAGTTTTCAAAGATaGAAGTCTTTCATCAATGGC +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVISFQR*KSFING
Trigger: GCCATTGATGAAAGACTTGCATCTTTGAAAACTGAT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAAATATTCCGTGGAGATaGATCCATCGCACTTATCTT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTNIPWR*IHRTYL
Trigger: AAGATAAGTGCGATGGATGCATCTCCACGGAATATT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAATTGAAGTAATGTGGTaGAAAGTCGAGGAAGGACTG +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEIEVMW*KVEEGL
Trigger: CAGTCCTTCCTCGACTTTGCACCACATTACTTCAAT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGATGTAGAGATACTCAATaGAACACTTCAACAGAAGAA +
Preference number: 4 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRCRDTQ*NTSTEE
Trigger: TTCTTCTGTTGAAGTGTTCCATTGAGTATCTCTACA...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACAAGTCTTTCATCAATaGCAACATATACCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVQVFHQ*QHIPVK
Trigger: TTTCACAGGTATATGTTGCCATTGATGAAAGACTTG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGGTAATTACTTTCCTTaGCAGTTTTACACAGGATCA +
Preference number: 4 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDGNYFP*QFYTGS
Trigger: TGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp GATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTGGTGCTGAGGAAATATTATGTTACTaGGTAACGGCAAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DVVPFKDYKLYTGHGGAEEILCY*VTAKAN
Trigger: ATTTGCCTTTGCCGTTACCCAGTAACATAATATTTC...CTCAGCACCACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR TCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACAGACAGATGTCTCATATaGAGGTACCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTDRCLI*RYHRRT
Trigger: GGTTCTCCTATGGTACCTTCATATGAGACATCTGTC...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACAACTTGGAGGGCTTCTTaGTATGGAAGTTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTTWRAS*YGSSRC
Trigger: ACAACGTGAACTTCCATATCAAGAAGCCCTCCAAGT...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAAGAATTCCCTTTCCTaGAGCACAATAGGATCAATG +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEKNSLS*STIGSM
Trigger: CATTGATCCTATTGTGCTTCAGGAAAGGGAATTCTT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACACACAAAGTCTCTGGTaGTTAATGGGATTCAGACAG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNTQSLW*LMGFRQ
Trigger: CTGTCTGAATCCCATTAATCACCAGAGACTTTGTGT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAAAAACCCTAGAATATaGGCGTATGCAAGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEKNPRI*AYASKC
Trigger: GCACTTACTTGCATACGCTCATATTCTAGGGTTTTT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACGATTACAGCAACGACTaGAGAAAATCTGCCCACATA +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNDYSND*RKSAHI
Trigger: TATGTGGGCAGATTTTCTGCAGTCGTTGCTGTAATC...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTGTCCAGAAGAATTTTaGGTTCATCCTCAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNCPEEF*VHPQWS
Trigger: AGACCACTGAGGATGAACGCAAAATTCTTCTGGACA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AAGAATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGCATTGCTTGTCCAATTaGTATAGCTTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: KNRAEHPCYKCKEMPPWKHCLSN*YSLCPC
Trigger: ACAAGGGCACAAGCTATAGCAATTGGACAAGCAATG...CTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR GCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACATTGTACAGCCTAGGTaGTGTGGACAACCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNIVQPR*CGQPSK
Trigger: TTTTGAAGGTTGTCCACAGCACCTAGGCTGTACAAT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACCTGTTATTCCAAGCTTaGAGCACTTCACAGAGACTT +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNLLFQA*STSQRL
Trigger: AAGTCTCTGTGAAGTGCTGCAAGCTTGGAATAACAG...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACAAAATATGTTACGGCTaGCTTTCCTACTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNKICYG*LSYSQQ
Trigger: CTGTTGGGAGTAGGAAAGCCAGCCGTAACATATTTT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACCAACAAGAACCAAGGTaGGTCGAACATCAACTATTC +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNQQEPR*VEHQLF
Trigger: GAATAGTTGATGTTCGACCCACCTTGGTTCTTGTTG...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAATCACTAAATCACCTTaGGTCATTCGACTGATTCGT +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEITKSP*VIRLIR
Trigger: ACGAATCAGTCGAATGACCCAAGGTGATTTAGTGAT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACGGAAAGAGCAACAACTaGTGTTACCTGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNGKSNN*CYLFAD
Trigger: ATCTGCAAACAGGTAACACCAGTTGTTGCTCTTTCC...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTCCATTCTGAAGTCCTaGAGAAATATTCCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNSILKS*RNIPWR
Trigger: TCTCCACGGAATATTTCTCCAGGACTTCAGAATGGA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAGAAGCCTTTTTGGTTaGTTGTGGTTCTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHERSLFG*LWFCFC
Trigger: ACAGAAACAGAACCACAACCAACCAAAAAGGCTTCT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATTAGTCATAAGTCCTTaGTCAACTTGCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHELVISP*STCFQF
Trigger: GAACTGGAAGCAAGTTGACCAAGGACTTATGACTAA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR TCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTCGGATTAGCCAGTTaGCTAATTCCTTTCCTACAA +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFGLAS*LIPFLQ
Trigger: TTGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTCCAGACGAGGCATTTaGTTCAAAATAAATCTATCA +
Preference number: 4 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMSRRGI*FKINLS
Trigger: TGATAGATTTATTTTGAAGCAAATGCCTCGTCTGGA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACACCCTCAATCAGGGAATaGAATGAAGGGTTTTGCATT +
Preference number: 4 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTPSIRE*NEGFCI
Trigger: AATGCAAAACCCTTCATTCCATTCCCTGATTGAGGG...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CCA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGCAAATTTGCAAAGATaGCTTTCATGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTANLQR*LSWLTF
Trigger: AAAAGTCAACCATGAAAGCCATCTTTGCAAATTTGC...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAATAATTGAAGTAATGTaGTGCAAAGTCGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEIIEVM*CKVEEG
Trigger: TCCTTCCTCGACTTTGCACCACATTACTTCAATTAT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACCATTATGTAGAAAGTTaGAAAAGGGGATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNHYVES*KRGCPQ
Trigger: CTGTGGACATCCCCTTTTCCAACTTTCTACATAATG...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTTACATTGGCTATCTaGCATCCAGTATTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFTLAI*HPVLFQ
Trigger: CTGAAACAATACTGGATGCCAGATAGCCAATGTAAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTTTTGCTTCCTGATTaGCCACTTGAAGTACTTGAT +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFLLPD*PLEVLD
Trigger: ATCAAGTACTTCAAGTGGCCAATCAGGAAGCAAAAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR GCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTAAGAAAATTTTCATaGCACTTCCCAACCTACAGA +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNLRKFS*HFPTYR
Trigger: TCTGTAGGTTGGGAAGTGGCATGAAAATTTTCTTAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CCA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTCTCAGCACAGCTTTaGAATGAGAACGAATATATA +
Preference number: 4 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFSAQL*NENEYI
Trigger: TATATATTCGTTCTCATTCCAAAGCTGTGCTGAGAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 90 bp GCTTCAACGGCTCAGCCCCCGGAAGTCGGCCCCCGAGAGCGGCGGTaGGCTCCTCAGGCCGCGGACGGTTGCGGCAGGAAGCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASTAQPPEVGPRERR*APQAADGCGRKRSC
Trigger: GCAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTGAGGAGCCCACCGCCGCTCTCGGGGGCCGACTTCCGGGGGCTGAGCCGTTGAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264380.9
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
ENST00000443896.5
CDS-3UTR CAA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTCAGGCCGCGGACGGTaGCGGCAGGAAGCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EEARRTGWHEILWPSCPASGRGR*RQEAKL
Trigger: CAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTGA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp ATGTCAGGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCAGGCCGCGGACGGTaGCGGCAGGAAGCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: MSGSQGMEPPPYCSWTAPSGRGR*RQEAKL
Trigger: CAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTGA...GGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCCTGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTCAGGCCGCGGACGGTaGCGGCAGGAAGCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ARRTGWHEILWPSCPACVSGRGR*RQEAKL
Trigger: CAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTGA...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCATCAGGCCGCGGACGGTaGCGGCAGGAAGCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TGWHEILWPSCPACVWIPSGRGR*RQEAKL
Trigger: CAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTGA...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTCTACCTCCTACCTTTTaGGTCAGCAGGGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: ARRTGWHEILWPSCPACVLPPTF*VSRVRG
Trigger: CCCCCTCACCCTGCTGACCAAAAAGGTAGGAGGTAG...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GGATCCCAGGGGATGGAACCTCCACCGTACTGCTCTTGGACAGCCCCCTCATGCCTGACTGATGTGCGCTaGCTAGGACTGGCAGAATTA +
Preference number: 5 (lower is better)
Translates to: GSQGMEPPPYCSWTAPSCLTDVR*LGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACATCAGTCAG...GCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGAGGTTCCATCCCCTGGGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS CCA 90 bp CGTGGGACAGAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATaGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGACTAC +
Preference number: 5 (lower is better)
Translates to: RGTEEARRTGWHEIL*PSCPACVWIPDGDY
Trigger: GTAGTCACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTCTGTCCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAG +
Preference number: 5 (lower is better)
Translates to: ARRTGWHEILWPSCPACVVFGVH*DQAQTQ
Trigger: CTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACAC...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCCTGACTGATGTGCGCTaGCTAGGACTGGCAGAATTA +
Preference number: 5 (lower is better)
Translates to: EEARRTGWHEILWPSCPALTDVR*LGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACATCAGTCAG...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTGGCACATGTGGGTACTaGGAGGGCTTCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: ARRTGWHEILWPSCPACVGTCGY*EGFLIW
Trigger: CCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATCTACCTCCTACCTTTTaGGTCAGCAGGGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GWHEILWPSCPACVWIPDLPPTF*VSRVRG
Trigger: CCCCCTCACCCTGCTGACCAAAAAGGTAGGAGGTAG...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS TCA 90 bp GATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTaGCTACCTCCTACCTTTTTGGTCAGCAGGGTGAGGGGGCACATG +
Preference number: 5 (lower is better)
Translates to: DPMAQLSSLCLDSRW*LPPTFLVSRVRGHM
Trigger: CATGTGCCCCCTCACCCTGCTGACCAAAAAGGTAGGAGGTAGTCACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS CCA 90 bp AAGGCAGCTCCTGATTTGCCTCCCCGGGCCTGCCAGGGTGATGAGTaGGAGAGGGAACGAATGAAATCTTCTTCACTGCTGTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KAAPDLPPRACQGDE*ERERMKSSSLLSRI
Trigger: GATTCTGGACAGCAGTGAAGAAGATTTCATTCGTTCCCTCTCCCACTCATCACCCTGGCAGGCCCGGGGAGGCAAATCAGGAGCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: EARRTGWHEILWPSCPACIWKFT*SSSTFR
Trigger: CCTGAACGTGGAGCTGGACAACGTGAACTTCCATAT...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTCTACCTCCTACCTTTTaGGTCAGCAGGGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: WHEILWPSCPACVWIPDGLPPTF*VSRVRG
Trigger: CCCCCTCACCCTGCTGACCAAAAAGGTAGGAGGTAG...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS TCA 90 bp GCGCCGCTGGAGTTCCTCATTAAGCTGCTTTTTATAAGGTGTGGGTaGCCTAACAGACTGTGTCCTCGAAGGGAGCTGAGGGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: APLEFLIKLLFIRCG*PNRLCPRRELRAGP
Trigger: TGGACCAGCCCTCAGCTCCCTTCGAGGACACAGTCTGTTAGGTCACCCACACCTTATAAAAAGCAGCTTAATGAGGAACTCCAGCGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264380.9
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
ENST00000422495.5
ENST00000443896.5
ENST00000452564.1
CDS GCA 90 bp CTACTTCATCTTGAGGCTCAACGCCTTGATTCTCGGTCCCCTCCTTaGCCGTCTGCCCAACCTGGTAGTAAGCACTATCTGCTCCACGTA +
Preference number: 5 (lower is better)
Translates to: LLHLEAQRLDSRSPP*PSAQPGSKHYLLHV
Trigger: TACGTGGAGCAGATAGTGCTTACTACCAGGTTGGGCAGACGGGCAAGGAGGGGACCGAGAATCAAGGCGTTGAGCCTCAAGATGAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTaGATTCCAGATGGTGACTACCTCCTACCTTTTTGGTCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: TGWHEILWPSCPACV*IPDGDYLLPFWSAG
Trigger: CCCTGCTGACCAAAAAGGTAGGAGGTAGTCACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATCAGGCCGCGGACGGTaGCGGCAGGAAGCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGSGRGR*RQEAKL
Trigger: CAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTGA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAG +
Preference number: 5 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVVFGVH*DQAQTQ
Trigger: CTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACAC...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: EARRTGWHEILWPSCPACLSRRI*RSSSVV
Trigger: GACCACTGAGGATGAACGCAAAATTCTTCTGGACAG...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTCCAATTGCTATAGCTaGTGCCCTTGTGGCAATATG +
Preference number: 5 (lower is better)
Translates to: EEARRTGWHEILWPSCPASNCYS*CPCGNM
Trigger: CATATTGCCACAAGGGCACAAGCTATAGCAATTGGA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RRTGWHEILWPSCPACVWIWKFT*SSSTFR
Trigger: CCTGAACGTGGAGCTGGACAACGTGAACTTCCATAT...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTACTTGGAGGGCTTCTaGATATGGAAGTTCACGTTG +
Preference number: 5 (lower is better)
Translates to: EEARRTGWHEILWPSCPAYLEGF*IWKFTL
Trigger: CAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTGTTCTGCTTTCCTTCTaGTGTCTAATGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ARRTGWHEILWPSCPACVVLLSF*CLMLKS
Trigger: GCTCTTCAGCATTAGACACAAGAAGGAAAGCAGAAC...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR CAA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTTTTCCCAGCATCCTCTaGCACAGATACAAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: EARRTGWHEILWPSCPACFPSIL*HRYKSC
Trigger: ACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAA...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: RRTGWHEILWPSCPACVWLSRRI*RSSSVV
Trigger: GACCACTGAGGATGAACGCAAAATTCTTCTGGACAG...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTTCCTACAATGCAGTaGGGATGCGTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACGCATCCCAACTGCATTGTAGGAAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGTTTCCTACAATGCAGTaGGGATGCGTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACGCATCCCAACTGCATTGTAGGAAA...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGCTGACTGATGTGCGCTaGCTAGGACTGGCAGAATTA +
Preference number: 5 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVLTDVR*LGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACATCAGTCAG...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGGCACATGTGGGTACTaGGAGGGCTTCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: WHEILWPSCPACVWIPDGGTCGY*EGFLIW
Trigger: CCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCAGAGCCTCCTCTTAGCTaGATTGTACAGCCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAEPPLS*IVQPRC
Trigger: GCACCTAGGCTGTACAATCAAGCTAAGAGGAGGCTC...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTGGATGAATCAAACTTaGCCAGGCCAAATCATCCTC +
Preference number: 5 (lower is better)
Translates to: RRTGWHEILWPSCPACVWWMNQT*PGQIIL
Trigger: GAGGATGATTTGGCCTGGCAAAGTTTGATTCATCCA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGTTTCCCAGCATCCTCTaGCACAGATACAAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: RRTGWHEILWPSCPACVWFPSIL*HRYKSC
Trigger: ACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAA...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAGGAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTTTCGGATTAGCCAGTaGACTAATTCCTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: EEARRTGWHEILWPSCPAFRISQ*TNSFPT
Trigger: TGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAA...GGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATCCAATTGCTATAGCTaGTGCCCTTGTGGCAATATG +
Preference number: 5 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGSNCYS*CPCGNM
Trigger: CATATTGCCACAAGGGCACAAGCTATAGCAATTGGA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTCCATCAACCATTGCTaGTCCAATTGCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: ARRTGWHEILWPSCPACVSINHC*SNCYSL
Trigger: CAAGCTATAGCAATTGGACAAGCAATGGTTGATGGA...AACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTTCCATCAACCATTGCTaGTCCAATTGCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: EARRTGWHEILWPSCPACSINHC*SNCYSL
Trigger: CAAGCTATAGCAATTGGACAAGCAATGGTTGATGGA...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTCTGACTGATGTGCGCTaGCTAGGACTGGCAGAATTA +
Preference number: 5 (lower is better)
Translates to: WHEILWPSCPACVWIPDGLTDVR*LGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACATCAGTCAG...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TCCTGCAGCACAACTGTTTGCTGCAAAGTCTCTGGCTGCTCGCTGCCTAAAGCAGCTCTTATCTGGCTTTaGGGATCCTGCAGCACAACT +
Preference number: 5 (lower is better)
Translates to: SCSTTVCCKVSGCSLPKAALIWL*GSCSTT
Trigger: AGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGAGC...TGCTTTAGGCAGCGAGCAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp ACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAATCTGGCATCCAGTATaGTTTCAGGTCACTATCCTG +
Preference number: 5 (lower is better)
Translates to: TGWHEILWPSCPACVWIPIWHPV*FQVTIL
Trigger: CAGGATAGTGACCTGAAACAATACTGGATGCCAGAT...TGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR CAA 90 bp AGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATAGCACTCTTTACATaGGCTATCTGGCATCCAGTA +
Preference number: 5 (lower is better)
Translates to: RRTGWHEILWPSCPACVWIALFT*AIWHPV
Trigger: TACTGGATGCCAGATAGCCAATGTAAAGAGTGCTAT...CCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR CAA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTTTCCAGGGATTTCTaGATTACAGCAACGACTGCA +
Preference number: 5 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGFSRDF*ITATTA
Trigger: TGCAGTCGTTGCTGTAATCAAGAAATCCCTGGAAAA...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407449.5
CDS-3UTR CAA 90 bp GGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGTTTCCCAGCATCCTCTaGCACAGATACAAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: GMRSYGPAVQPVFGFQMVFPSIL*HRYKSC
Trigger: ACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAA...CACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: WHEILWPSCPACVWIPDGLSRRI*RSSSVV
Trigger: GACCACTGAGGATGAACGCAAAATTCTTCTGGACAG...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TTGCGTTCATCCTCAGTGGTCTCTGTCCTAACATATGTTCGGTTAGCCTGGGGACAACCTCTCCATGGCTaGTTTCTCCCCATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LRSSSVVSVLTYVRLAWGQPLHG*FLPILL
Trigger: GAGGAGAATGGGGAGAAACAAGCCATGGAGAGGTTG...TCCCCAGGCTAACCGAACATATGTTAGGACAGAGACCACTGAGGATGAACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp CCAACAGGTGTTCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAATCATCATCCTGGTTCTaGACATCAGGTCGGACTGTC +
Preference number: 5 (lower is better)
Translates to: PTGVRGSLGSSTDTEQAESSSWF*TSGRTV
Trigger: GACAGTCCGACCTGATGTCAAGAACCAGGATGATGA...TTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTCCACCGTACTGCTCTaGGACAGCCCCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDSTVLL*DSPLMP
Trigger: GGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTTCTCGGTCCCCTCCTaGCCCGTCTGCCCAACCTGG +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMFSVPS*PVCPTW
Trigger: CCAGGTTGGGCAGACGGGCAAGGAGGGGACCGAGAA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCCACACCAAATACCCTCAGCCACGTGGGACAGAGGAAGCCAGAAGGACAGCAAAGAAATGCCACCTaGGAAGTTGCACATTATGGG +
Preference number: 5 (lower is better)
Translates to: KPTPNTLSHVGQRKPEGQQRNAT*EVAHYG
Trigger: CCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTG...CTGTCCTTCTGGCTTCCTCTGTCCCACGTGGCTGAGGGTATTTGGTGTGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS TCA 90 bp CTGGACTGGGCAGAAGAGCTGCTGAAGAGCACACAAAGTCTCTGGTaGTTAATGGGATTCAGACAGTCCACCTTTGTTGACCACACAGCA +
Preference number: 5 (lower is better)
Translates to: LDWAEELLKSTQSLW*LMGFRQSTFVDHTA
Trigger: TGCTGTGTGGTCAACAAAGGTGGACTGTCTGAATCCCATTAATCACCAGAGACTTTGTGTGCTCTTCAGCAGCTCTTCTGCCCAGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS-3UTR CAA 90 bp GAAGCCAGAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTCCTTCTGCTCTCTCTTaGTTAAAACGAAAGAGATTT +
Preference number: 5 (lower is better)
Translates to: EARRTGWHEILWPSCPACPSALS*LKRKRF
Trigger: AAATCTCTTTCGTTTTAACAAAGAGAGAGCAGAAGG...ACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp TGGGCAATCCGAGACACTGTTTTCTCAACAAGAACCAAGGTGGGTCGAACATCAGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAG +
Preference number: 5 (lower is better)
Translates to: WAIRDTVFSTRTKVGRTSVFGVH*DQAQTQ
Trigger: CTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACAC...TGATGTTCGACCCACCTTGGTTCTTGTTGAGAAAACAGTGTCTCGGATTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTTGGATGAATCAAACTTaGCCAGGCCAAATCATCCTC +
Preference number: 5 (lower is better)
Translates to: WHEILWPSCPACVWIPDGWMNQT*PGQIIL
Trigger: GAGGATGATTTGGCCTGGCAAAGTTTGATTCATCCA...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp CAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGGCACAGATACAAGTCTaGTTGAAAGAGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: QAGMRSYGPAVQPVFGFQAQIQV*LKEEYL
Trigger: CAAATACTCCTCTTTCAACAAGACTTGTATCTGTGC...CTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GAAGGACAGGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGAGCACAGATACAAGTCTaGTTGAAAGAGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: EGQAGMRSYGPAVQPVFGAQIQV*LKEEYL
Trigger: CAAATACTCCTCTTTCAACAAGACTTGTATCTGTGC...TCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCCTGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCTCCACCGTACTGCTCTaGGACAGCCCCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLSTVLL*DSPLMP
Trigger: GGGCATGAGGGGGCTGTCCAAGAGCAGTACGGTGGA...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACCCACAGGGCTCAGCGTaGGCTCTGCGAGTATACTGG +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDPQGSA*ALRVYW
Trigger: CCAGTATACTCGCAGAGCCAACGCTGAGCCCTGTGG...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAAAGGCAGCTCCTGATTaGCCTCCCCGGGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEKAAPD*PPRACQ
Trigger: CTGGCAGGCCCGGGGAGGCAAATCAGGAGCTGCCTT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 90 bp CCAAGCTTGCAGCACTTCACAGAGACTTTGTTTCTTGGCAATGAGTaGCTCAAAGACCGACTGCAGTTGCTGAGGGGTATCTACAGAGGA +
Preference number: 5 (lower is better)
Translates to: PSLQHFTETLFLGNE*LKDRLQLLRGIYRG
Trigger: TCCTCTGTAGATACCCCTCAGCAACTGCAGTCGGTCTTTGAGTCACTCATTGCCAAGAAACAAAGTCTCTGTGAAGTGCTGCAAGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS CCA 90 bp AATGAGCAAAAGGGTCTGAATTTTTGGGCTGAATTCTTCCTCCTCTaGCTCGATAATCGGCCAGCATTCTACCCAAGCTCTGGCTATCGC +
Preference number: 5 (lower is better)
Translates to: NEQKGLNFWAEFFLL*LDNRPAFYPSSGYR
Trigger: GCGATAGCCAGAGCTTGGGTAGAATGCTGGCCGATTATCGAGCCAGAGGAGGAAGAATTCAGCCCAAAAATTCAGACCCTTTTGCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS CCA 90 bp CCACCATCTGGTTATAGGAGAAATACTGGTGATAATCATGATGGATaGAGTGACCACAGGGCTCAGCGTTGGCTCTGCGAGTATACTGGT +
Preference number: 5 (lower is better)
Translates to: PPSGYRRNTGDNHDG*SDHRAQRWLCEYTG
Trigger: ACCAGTATACTCGCAGAGCCAACGCTGAGCCCTGTGGTCACTCCATCCATCATGATTATCACCAGTATTTCTCCTATAACCAGATGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS-3UTR CAA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATGTTCTGCTTTCCTTCTaGTGTCTAATGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDVLLSF*CLMLKS
Trigger: GCTCTTCAGCATTAGACACAAGAAGGAAAGCAGAAC...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp ACAATGATTCCGGTACAGGTGCAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGGCACAGATACAAGTCTaGTTGAAAGAGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: TMIPVQVQRKHKGDPPGKAQIQV*LKEEYL
Trigger: CAAATACTCCTCTTTCAACAAGACTTGTATCTGTGC...CTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTGCACCTGTACCGGAATCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp GGCTGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATTTTCGGATTAGCCAGTaGACTAATTCCTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: GWHEILWPSCPACVWIPDFRISQ*TNSFPT
Trigger: TGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAA...ATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATTACTTGGAGGGCTTCTaGATATGGAAGTTCACGTTG +
Preference number: 5 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDYLEGF*IWKFTL
Trigger: CAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTA...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp AGCACAGACACAGAGCAAGCAGAATCTGAAAGAGCATTCAAGTCTTCCCCAATACCGCCGGGCAAGCTGTaGTGCTATGTTCTTGATGCT +
Preference number: 5 (lower is better)
Translates to: STDTEQAESERAFKSSPIPPGKL*CYVLDA
Trigger: AGCATCAAGAACATAGCACAACAGCTTGCCCGGCGG...TATTGGGGAAGACTTGAATGCTCTTTCAGATTCTGCTTGCTCTGTGTCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACCAGGCACTAGGAGCATaGCTGGACTGGGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDQALGA*LDWAEE
Trigger: CTCTTCTGCCCAGTCCAGCAATGCTCCTAGTGCCTG...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATATCTGCACACAGCCTaGGCCATGAACAAAGCGCCG +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVYLHTA*AMNKAP
Trigger: CGGCGCTTTGTTCATGGCCAAGGCTGTGTGCAGATA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATTGAGGCTCAACGCCTaGATTCTCGGTCCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVLRLNA*ILGPLL
Trigger: AAGGAGGGGACCGAGAATCAAGGCGTTGAGCCTCAA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 90 bp CTTTGTTTCTTGGCAATGAGTGACTCAAAGACCGACTGCAGTTGCTaGGGGGTATCTACAGAGGAAGACATGAGCCTTGCTTGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LCFLAMSDSKTDCSC*GVSTEEDMSLACIF
Trigger: GAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTAGATACCCCTCAGCAACTGCAGTCGGTCTTTGAGTCACTCATTGCCAAGAAACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS TCA 90 bp ACTGACTGTTCAGACATGACTTCAGGTGGCGTAGGCAATTGGAGATaGGTAGAACTGGTGGAGCTCTGGCTGGACAAAGTTGTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: TDCSDMTSGGVGNWR*VELVELWLDKVVKK
Trigger: CTTCTTAACAACTTTGTCCAGCCAGAGCTCCACCAGTTCTACTCATCTCCAATTGCCTACGCCACCTGAAGTCATGTCTGAACAGTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 90 bp CCAGGACTTGGAGGAACTGAAGGTCTCTTTCTACCCTTTTCCTGTTaGAAAAGGTCCTGCAACCTGTTATTCCAAGCTTGCAGCACTTCA +
Preference number: 5 (lower is better)
Translates to: PGLGGTEGLFLPFSC*KRSCNLLFQACSTS
Trigger: TGAAGTGCTGCAAGCTTGGAATAACAGGTTGCAGGACCTTTTCCAACAGGAAAAGGGTAGAAAGAGACCTTCAGTTCCTCCAAGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTGCACAGATACAAGTCTaGTTGAAAGAGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: WHEILWPSCPACVWIPDGAQIQV*LKEEYL
Trigger: CAAATACTCCTCTTTCAACAAGACTTGTATCTGTGC...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp CTCCAGGTTGTTATGATGCCAGCCCAAAGGTGTGAAAGGCAGCTCTTTGGATTTCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: LQVVMMPAQRCERQLFGFLSRRI*RSSSVV
Trigger: GACCACTGAGGATGAACGCAAAATTCTTCTGGACAG...AAATCCAAAGAGCTGCCTTTCACACCTTTGGGCTGGCATCATAACAACCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp TACAATGCAGTTGGGATGCGTTCTCAACCAGTAGCGGTGATCCTGAAACTCCATTTTCCTACAATGCAGTaGGGATGCGTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: YNAVGMRSQPVAVILKLHFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACGCATCCCAACTGCATTGTAGGAAA...ATGGAGTTTCAGGATCACCGCTACTGGTTGAGAACGCATCCCAACTGCATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp TGGCATGAGATCCTATGGCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTTTTCGGATTAGCCAGTaGACTAATTCCTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: WHEILWPSCPACVWIPDGFRISQ*TNSFPT
Trigger: TGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAA...ACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGCCATAGGATCTCATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS-3UTR CAA 90 bp GATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTGGTGCTGAGGGCACATGTGGGTACTaGGAGGGCTTCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: DVVPFKDYKLYTGHGGAEGTCGY*EGFLIW
Trigger: CCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC...CTCAGCACCACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CAA 90 bp TCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGGAGTATTTGAGGGGCACATGTGGGTACTaGGAGGGCTTCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: SQHPLAQIQVLLKEEYLRGTCGY*EGFLIW
Trigger: CCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC...CCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACAACCTCTCCATGGCTaGTTTCTCCCCATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVQPLHG*FLPILL
Trigger: GAGGAGAATGGGGAGAAACAAGCCATGGAGAGGTTG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAGAGCCTCCTCTTAGCTaGATTGTACAGCCTAGGTGC +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVEPPLS*IVQPRC
Trigger: GCACCTAGGCTGTACAATCAAGCTAAGAGGAGGCTC...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTACTGCAGCACAACTGTTaGCTGCAAAGTCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVLQHNC*LQSLWL
Trigger: CAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAG...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTATCCAGTGACAGGTTAGTAATGCTGGCTGATCTATTTCGAGCAGGAGATTTCCTGCAGCACAACTGTTaGCTGCAAAGTCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LSSDRLVMLADLFRAGDFLQHNC*LQSLWL
Trigger: CAGCCAGAGACTTTGCAGCAAACAGTTGTGCTGCAG...GAAATCTCCTGCTCGAAATAGATCAGCCAGCATTACTAACCTGTCACTGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACCGGAGACACCACTGTaGGCATTTTACCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRPETPL*AFYLVH
Trigger: GTGGACAAGGTAAAATGCCAACAGTGGTGTCTCCGG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAAAGAAAGCACAAGGGAGACCCGCCGGGCAAGCTGTTGTGCTATGTTCTTGATTTTCGGATTAGCCAGTaGACTAATTCCTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: QRKHKGDPPGKLLCYVLDFRISQ*TNSFPT
Trigger: TGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAA...ATCAAGAACATAGCACAACAGCTTGCCCGGCGGGTCTCCCTTGTGCTTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp GATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTGGTGCTGAGATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: DVVPFKDYKLYTGHGGAEIWKFT*SSSTFR
Trigger: CCTGAACGTGGAGCTGGACAACGTGAACTTCCATAT...CTCAGCACCACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CAA 90 bp CTATCCAGTGACAGGTTAGTAATGCTGGCTGATCTATTTCGAGCAGGAGATTTCATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LSSDRLVMLADLFRAGDFIWKFT*SSSTFR
Trigger: CCTGAACGTGGAGCTGGACAACGTGAACTTCCATAT...GAAATCTCCTGCTCGAAATAGATCAGCCAGCATTACTAACCTGTCACTGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp TACAATGCAGTTGGGATGCGTTCTCAACCAGTAGCGGTGATCCTGAAACTCCATTGTTGTGCTATGTTCTaGATGCTTCACAGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: YNAVGMRSQPVAVILKLHCCAMF*MLHRGN
Trigger: GTTGCCTCTGTGAAGCATCAAGAACATAGCACAACA...ATGGAGTTTCAGGATCACCGCTACTGGTTGAGAACGCATCCCAACTGCATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACCGCCGGGCAAGCTGTaGTGCTATGTTCTTGATGCT +
Preference number: 5 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTPPGKL*CYVLDA
Trigger: AGCATCAAGAACATAGCACAACAGCTTGCCCGGCGG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAAAAGACCGACTGCAGTaGCTGAGGGGTATCTACAGA +
Preference number: 5 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGKDRLQ*LRGIYR
Trigger: TCTGTAGATACCCCTCAGCAACTGCAGTCGGTCTTT...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS GCA 90 bp CCCTTTTCCTGTTGGAAAAGGTCCTGCAACCTGTTATTCCAAGCTTaGAGCACTTCACAGAGACTTTGTTTCTTGGCAATGAGTGACTCA +
Preference number: 5 (lower is better)
Translates to: PFSCWKRSCNLLFQA*STSQRLCFLAMSDS
Trigger: TGAGTCACTCATTGCCAAGAAACAAAGTCTCTGTGAAGTGCTGCAAGCTTGGAATAACAGGTTGCAGGACCTTTTCCAACAGGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS GCA 90 bp GGAACTGAAGGTCTCTTTCTACCCTTTTCCTGTTGGAAAAGGTCCTaGAACCTGTTATTCCAAGCTTGCAGCACTTCACAGAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: GTEGLFLPFSCWKRS*NLLFQACSTSQRLC
Trigger: ACAAAGTCTCTGTGAAGTGCTGCAAGCTTGGAATAACAGGTTGCAGGACCTTTTCCAACAGGAAAAGGGTAGAAAGAGACCTTCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 90 bp GCGATCCTCTTTTTCTCCATTCTGAAGTCCTGGAGAAATATTCCGTaGAGATGCATCCATCGCACTTATCTTGCTTTCTTCCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: AILFFSILKSWRNIP*RCIHRTYLAFFPLS
Trigger: AGACAAGGGGAAGAAAGCAAGATAAGTGCGATGGATGCATCTCCACGGAATATTTCTCCAGGACTTCAGAATGGAGAAAAAGAGGATCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGATGTTTCCTACAATGCAGTaGGGATGCGTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: MQRNATLEVAHYGKSSQMFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACGCATCCCAACTGCATTGTAGGAAA...CATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACCTGACTGATGTGCGCTaGCTAGGACTGGCAGAATTA +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDLTDVR*LGLAEL
Trigger: TAATTCTGCCAGTCCTAGCAAGCGCACATCAGTCAG...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCAACAGGTGTTCGGGGTTCACTTGGATCAAGCACAGACACAGAGCAAGCAGAATTATGTGCAATGTTCTaGGTACAAACAAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: PTGVRGSLGSSTDTEQAELCAMF*VQTKPL
Trigger: CAATGGCTTTGTTTGTACCAAGAACATTGCACATAA...TTCTGCTTGCTCTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACACCTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGACAGTCCACCTTTGTaGACCACACAGCATCACTCA +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDDSPPL*TTQHHS
Trigger: TGAGTGATGCTGTGTGGTCAACAAAGGTGGACTGTC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTCAGACAGTCCACCTTaGTTGACCACACAGCATCAC +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDSDSPP*LTTQHH
Trigger: GTGATGCTGTGTGGTCAACAAAGGTGGACTGTCTGA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACGCCGTGGGCCTCTTTaGTTGAACAGCATTTGTAAT +
Preference number: 5 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGRRGPL*LNSICN
Trigger: ATTACAAATGCTGTTCAACAAAAGAGGCCCACGGCG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp TGCCACCTTGGAAGTTGCACATTATGGGAAGAGCAGTCAGATGTAGTTCCTTTTATGCCACCTTGGAAGTaGCACATTATGGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: CHLGSCTLWEEQSDVVPFMPPWK*HIMGRA
Trigger: TGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCAT...AAAAGGAACTACATCTGACTGCTCTTCCCATAATGTGCAACTTCCAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS CCA 90 bp AGCAAATTTGCAAAGATGGCTTTCATGGTTGACTTTTCCTTCACTTaGCTGTCTGTGGATCCCAGCAAATGCCCATCAAACACATCTTCG +
Preference number: 5 (lower is better)
Translates to: SKFAKMAFMVDFSFT*LSVDPSKCPSNTSS
Trigger: CGAAGATGTGTTTGATGGGCATTTGCTGGGATCCACAGACAGCCAAGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTGCAAATTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGAATCTGGCATCCAGTATaGTTTCAGGTCACTATCCTG +
Preference number: 5 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGIWHPV*FQVTIL
Trigger: CAGGATAGTGACCTGAAACAATACTGGATGCCAGAT...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp TCCCAGCATCCTCTTGCACAGATACAAGTCTTGTTGAAAGAGGAGTATTTGAGGTTTCCCAGCATCCTCTaGCACAGATACAAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: SQHPLAQIQVLLKEEYLRFPSIL*HRYKSC
Trigger: ACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAA...CCTCAAATACTCCTCTTTCAACAAGACTTGTATCTGTGCAAGAGGATGCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATCCAATTGCTATAGCTaGTGCCCTTGTGGCAATATG +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVSNCYS*CPCGNM
Trigger: CATATTGCCACAAGGGCACAAGCTATAGCAATTGGA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp GATGTAGTTCCTTTTAAAGACTACAAGCTTTACACTGGGCATGGTGGTGCTGAGTCCAATTGCTATAGCTaGTGCCCTTGTGGCAATATG +
Preference number: 5 (lower is better)
Translates to: DVVPFKDYKLYTGHGGAESNCYS*CPCGNM
Trigger: CATATTGCCACAAGGGCACAAGCTATAGCAATTGGA...CTCAGCACCACCATGCCCAGTGTAAAGCTTGTAGTCTTTAAAAGGAACTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGGCACATGTGGGTACTaGGAGGGCTTCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEGTCGY*EGFLIW
Trigger: CCATATCAAGAAGCCCTCCAAGTACCCACATGTGCC...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAGGCCACTTGAAGTACTaGATGCATCCTTTGAATGAG +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVGHLKY*MHPLNE
Trigger: CTCATTCAAAGGATGCATCAAGTACTTCAAGTGGCC...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGATTCCTGATTGGCCACTaGAAGTACTTGATGCATCCT +
Preference number: 5 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRFLIGH*KYLMHP
Trigger: AGGATGCATCAAGTACTTCAAGTGGCCAATCAGGAA...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAGACATGAGCCTTGCTaGCATCTTCTCAATCCAGTT +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVRHEPC*HLLNPV
Trigger: AACTGGATTGAGAAGATGCAAGCAAGGCTCATGTCT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATCAGTCTTCCAGGACTaGGAGGAACTGAAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTSVFQD*EELKVS
Trigger: AGAGACCTTCAGTTCCTCCAAGTCCTGGAAGACTGA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGAGGTGGCGTAGGCAATaGGAGATGAGTAGAACTGGT +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMRWRRQ*EMSRTG
Trigger: ACCAGTTCTACTCATCTCCAATTGCCTACGCCACCT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACAACAGGACAGATTATaGTCAGAAGCCATTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGQQDRL*SEAIPV
Trigger: CACAGGAATGGCTTCTGACAATAATCTGTCCTGTTG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACGTTCTGCTTTCCTTCTaGTGTCTAATGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDVLLSF*CLMLKS
Trigger: GCTCTTCAGCATTAGACACAAGAAGGAAAGCAGAAC...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAG +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNVFGVH*DQAQTQ
Trigger: CTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACAC...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAGAATAGAGCAGAACATCCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGGTGTTCGGGGTTCACTaGGATCAAGCACAGACACAG +
Preference number: 5 (lower is better)
Translates to: KNRAEHPCYKCKEMPPWKVFGVH*DQAQTQ
Trigger: CTGTGTCTGTGCTTGATCCAAGTGAACCCCGAACAC...CTTCCAAGGTGGCATTTCTTTGCATTTATAACATGGATGTTCTGCTCTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATCCATCAACCATTGCTaGTCCAATTGCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVSINHC*SNCYSL
Trigger: CAAGCTATAGCAATTGGACAAGCAATGGTTGATGGA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAATATGGAAGTTCACGTaGTCCAGCTCCACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEIWKFT*SSSTFR
Trigger: CCTGAACGTGGAGCTGGACAACGTGAACTTCCATAT...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTACTTGGAGGGCTTCTaGATATGGAAGTTCACGTTG +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDYLEGF*IWKFTL
Trigger: CAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCAATCAAATACTCTTTTaGGTCAGCAGGGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLNQILF*VSRVRG
Trigger: CCCCCTCACCCTGCTGACCAAAAAGAGTATTTGATT...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATCATCATCCTGGTTCTaGACATCAGGTCGGACTGTC +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHESSSWF*TSGRTV
Trigger: GACAGTCCGACCTGATGTCAAGAACCAGGATGATGA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTCTTATCTGGCTTTaGGGATCCTGCAGCACAACT +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEALIWL*GSCSTT
Trigger: AGTTGTGCTGCAGGATCCCAAAAGCCAGATAAGAGC...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp GGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAAGCTGATGACTATCACAGAACATGCTaGGACACTGATAAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GSFTQDHCKWVKCHEADDYHRTC*DTDKKA
Trigger: GGCCTTCTTATCAGTGTCCAAGCATGTTCTGTGATA...GTCATCAGCTTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTATTCTCAATCCAGTTCTaGAACTCACCTTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVFSIQF*NSPSSI
Trigger: GATGGAAGAAGGTGAGTTCAAGAACTGGATTGAGAA...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATCTACCCTTTTCCTGTaGGAAAAGGTCCTGCAACCT +
Preference number: 5 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTSTLFL*EKVLQP
Trigger: AGGTTGCAGGACCTTTTCCAACAGGAAAAGGGTAGA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTCCATCGCACTTATCTaGCTTTCTTCCCCTTGTCTC +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMSIALI*LSSPCL
Trigger: GAGACAAGGGGAAGAAAGCAAGATAAGTGCGATGGA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAATTCCAGAAGCCTTTTaGGTTGGTTGTGGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVIPEAF*VGCGSV
Trigger: AACAGAACCACAACCAACCAAAAAGGCTTCTGGAAT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACACCAACTACTAGCTCATaGCTAGTATCATCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTPTTSS*LVSSRP
Trigger: TGGGCGAGATGATACTAGCAATGAGCTAGTAGTTGG...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 90 bp TCTGAAGTACTATTTGTTGGAAGCCCTTCTTCGGCACTGTTCCACTaGGTCGCTTTAGACAATTCCTCTAAGGCATTTCGGTATTCTTTA +
Preference number: 5 (lower is better)
Translates to: SEVLFVGSPSSALFH*VALDNSSKAFRYSL
Trigger: TAAAGAATACCGAAATGCCTTAGAGGAATTGTCTAAAGCGACTCAGTGGAACAGTGCCGAAGAAGGGCTTCCAACAAATAGTACTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 90 bp TGTAAATTTCTCACTACAGTCATAGCACTCTTTACATTGGCTATCTaGCATCCAGTATTGTTTCAGGTCACTATCCTGGCTTTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: CKFLTTVIALFTLAI*HPVLFQVTILAFPL
Trigger: GAGGGGAAAAGCCAGGATAGTGACCTGAAACAATACTGGATGCCAGATAGCCAATGTAAAGAGTGCTATGACTGTAGTGAGAAATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264380.9
ENST00000407449.5
ENST00000422495.5
ENST00000452564.1
CDS CCA 90 bp AAAGGAAATGGGAGTCACTATGGATCGAGGTTCTCAGCACAGCTTTaGAATGAGAACGAATATATAGAGGGTTGTCTCGAACCATCTTTA +
Preference number: 5 (lower is better)
Translates to: KGNGSHYGSRFSAQL*NENEYIEGCLEPSL
Trigger: TAAAGATGGTTCGAGACAACCCTCTATATATTCGTTCTCATTCCAAAGCTGTGCTGAGAACCTCGATCCATAGTGACTCCCATTTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAGCACAGATACAAGTCTaGTTGAAAGAGGAGTATTTG +
Preference number: 5 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRAQIQV*LKEEYL
Trigger: CAAATACTCCTCTTTCAACAAGACTTGTATCTGTGC...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTTTCCCAGCATCCTCTaGCACAGATACAAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMFPSIL*HRYKSC
Trigger: ACAAGACTTGTATCTGTGCAAGAGGATGCTGGGAAA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTAAAGGCCAAAGAATAAGTCTTTCGTTTATCTTCAGAGGAGGTGACTTCCTCTCCAATTGCTATAGCTaGTGCCCTTGTGGCAATATG +
Preference number: 5 (lower is better)
Translates to: LKGQRISLSFIFRGGDFLSNCYS*CPCGNM
Trigger: CATATTGCCACAAGGGCACAAGCTATAGCAATTGGA...GAGGAAGTCACCTCCTCTGAAGATAAACGAAAGACTTATTCTTTGGCCTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGACTGGTGTTACCTGTTaGCAGATTCTACACCAGGAA +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMTGVTC*QILHQE
Trigger: TTCCTGGTGTAGAATCTGCAAACAGGTAACACCAGT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGATAGACCAGGACTCATaGGAAAGAGCAACAACTGGT +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMIDQDS*ERATTG
Trigger: ACCAGTTGTTGCTCTTTCCAATGAGTCCTGGTCTAT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTCTGGCTGGACAAAGTaGTTAAGAAGCGATCCTCTT +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMSGWTK*LRSDPL
Trigger: AAGAGGATCGCTTCTTAACAACTTTGTCCAGCCAGA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGAGATGGCTTTCATGGTaGACTTTTCCTTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMRWLSW*TFPSLG
Trigger: GCCAAGTGAAGGAAAAGTCAACCATGAAAGCCATCT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATCCATCTACTTCATCTaGAGGCTCAACGCCTTGATT +
Preference number: 5 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTSIYFI*RLNALI
Trigger: AATCAAGGCGTTGAGCCTCAAGATGAAGTAGATGGA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGACGTGGGCCTCTTTTGTaGAACAGCATTTGTAATATA +
Preference number: 5 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRRGPLL*NSICNI
Trigger: TATATTACAAATGCTGTTCAACAAAAGAGGCCCACG...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp TGGCCTAAACAAGAGCAGCAAGGGACCAGACATATAGTTCTACCACTCAATAGAATTAGTCATAAGTCCTaGGTCAACTTGCTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: WPKQEQQGTRHIVLPLNRISHKS*VNLLPV
Trigger: AACTGGAAGCAAGTTGACCAAGGACTTATGACTAAT...TCTATTGAGTGGTAGAACTATATGTCTGGTCCCTTGCTGCTCTTGTTTAGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAAATGAGAGATTACCTTaGCAAGGCAGCAACTATTGT +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVNERLP*QGSNYC
Trigger: ACAATAGTTGCTGCCTTGCAAAGGTAATCTCTCATT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 90 bp ACCTGTTTGCAGATTCTACACCAGGAATATGTAAGAATTGTATGCTaGTATCCAGGTACTGGAGAATCCAACTCCTTCAGGATTATCTGC +
Preference number: 5 (lower is better)
Translates to: TCLQILHQEYVRIVC*YPGTGESNSFRIIC
Trigger: GCAGATAATCCTGAAGGAGTTGGATTCTCCAGTACCTGGATATCAGCATACAATTCTTACATATTCCTGGTGTAGAATCTGCAAACAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS CCA 90 bp GATTATAGCTATTTCCTGGAAGCAAATTTGCAAAGATGGCTTTCATaGTTGACTTTTCCTTCACTTGGCTGTCTGTGGATCCCAGCAAAT +
Preference number: 5 (lower is better)
Translates to: DYSYFLEANLQRWLS*LTFPSLGCLWIPAN
Trigger: ATTTGCTGGGATCCACAGACAGCCAAGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTGCAAATTTGCTTCCAGGAAATAGCTATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGACCTTCTGCTCTCTCTTaGTTAAAACGAAAGAGATTT +
Preference number: 5 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGPSALS*LKRKRF
Trigger: AAATCTCTTTCGTTTTAACAAAGAGAGAGCAGAAGG...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGATAGCACTCTTTACATaGGCTATCTGGCATCCAGTA +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMIALFT*AIWHPV
Trigger: TACTGGATGCCAGATAGCCAATGTAAAGAGTGCTAT...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACATTTTCCAGGGATTTCTaGATTACAGCAACGACTGCA +
Preference number: 5 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTFSRDF*ITATTA
Trigger: TGCAGTCGTTGCTGTAATCAAGAAATCCCTGGAAAA...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATGGATGAATCAAACTTaGCCAGGCCAAATCATCCTC +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEWMNQT*PGQIIL
Trigger: GAGGATGATTTGGCCTGGCAAAGTTTGATTCATCCA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACCTGTCCAGAAGAATTTaGCGTTCATCCTCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNLSRRI*RSSSVV
Trigger: GACCACTGAGGATGAACGCAAAATTCTTCTGGACAG...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTTCCTACAATGCAGTaGGGATGCGTTCTCAACCAG +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFPTMQ*GCVLNQ
Trigger: CTGGTTGAGAACGCATCCCAACTGCATTGTAGGAAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGAGTACTTGGAGGGCTTCTaGATATGGAAGTTCACGTTG +
Preference number: 5 (lower is better)
Translates to: HVINAKKCHLGSCTLWEEYLEGF*IWKFTL
Trigger: CAACGTGAACTTCCATATCAAGAAGCCCTCCAAGTA...CTCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACAATCAAATACTCTTTTaGGTCAGCAGGGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNNQILF*VSRVRG
Trigger: CCCCCTCACCCTGCTGACCAAAAAGAGTATTTGATT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACCCTGTTATTCCAAGCTaGCAGCACTTCACAGAGACT +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNPVIPS*QHFTET
Trigger: AGTCTCTGTGAAGTGCTGCAAGCTTGGAATAACAGG...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACCTGAAGTACTATTTGTaGGAAGCCCTTCTTCGGCAC +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNLKYYL*EALLRH
Trigger: GTGCCGAAGAAGGGCTTCCAACAAATAGTACTTCAG...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAACAGAAGCCTTTTTGGTaGGTTGTGGTTCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEQKPFW*VVVLFL
Trigger: CAGAAACAGAACCACAACCAACCAAAAAGGCTTCTG...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAGGCTCATTCACAACAGTTTTCACTCTTCAAGCTCAGCAAACTCCTACAGGTAATGAGGATTTATGAGTaGCTTCTTTTGTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: QAHSQQFSLFKLSKLLQVMRIYE*LLLCIS
Trigger: GGAGATACACAAAAGAAGCAACTCATAAATCCTCAT...TACCTGTAGGAGTTTGCTGAGCTTGAAGAGTGAAAACTGTTGTGAATGAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCCAACCTACAGACAGCTCCACAGGTATCAAAAACCAAAGTGCAAATTCATGGATTCCAGACGAGGCATTaGCTTCAAAATAAATCTATC +
Preference number: 5 (lower is better)
Translates to: PNLQTAPQVSKTKVQIHGFQTRH*LQNKSI
Trigger: GATAGATTTATTTTGAAGCAAATGCCTCGTCTGGAA...TCCATGAATTTGCACTTTGGTTTTTGATACCTGTGGAGCTGTCTGTAGGTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGCGAATATATAGAGGGTaGTCTCGAACCATCTTTAGG +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMRIYRG*SRTIFR
Trigger: CCTAAAGATGGTTCGAGACAACCCTCTATATATTCG...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACCGTGAGCCACCGCACTaGGCCTATTTCTTAACATTT +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNREPPH*AYFLTF
Trigger: AAATGTTAAGAAATAGGCCAAGTGCGGTGGCTCACG...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 90 bp AGTATACTGGTGCCCATAAAACCTAAGTTCAAGGTATTTTGCAAATaGCATAGACCAGGACTCATTGGAAAGAGCAACAACTGGTGTTAC +
Preference number: 5 (lower is better)
Translates to: SILVPIKPKFKVFCK*HRPGLIGKSNNWCY
Trigger: GTAACACCAGTTGTTGCTCTTTCCAATGAGTCCTGGTCTATGTCATTTGCAAAATACCTTGAACTTAGGTTTTATGGGCACCAGTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTGTTGTGCTATGTTCTaGATGCTTCACAGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNCCAMF*MLHRGN
Trigger: GTTGCCTCTGTGAAGCATCAAGAACATAGCACAACA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACGTGGTTCTGTTTCTGTaGTACGATTTGTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNVVLFL*YDLSVL
Trigger: GAGGACAGACAAATCGTACAACAGAAACAGAACCAC...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CTTCAAGCTCAGCAAACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAACCATCTCAAGCTTTTaGTCCCATGTAAATGTTCGA +
Preference number: 5 (lower is better)
Translates to: LQAQQTPTGNYFPWQFYTTISSF*SHVNVR
Trigger: TCGAACATTTACATGGGACAAAAAGCTTGAGATGGT...TGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGTTTGCTGAGCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATTCTCGGGACTCATGTaGTATGTTAAGGAAGGAAGT +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEFSGLM*YVKEGS
Trigger: ACTTCCTTCCTTAACATACAACATGAGTCCCGAGAA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTCCTACAGGTAATTACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGTTATGTGCAATGTTCTaGGTACAAACAAAGCCATTG +
Preference number: 5 (lower is better)
Translates to: TPTGNYFPWQFYTGSLQMLCAMF*VQTKPL
Trigger: CAATGGCTTTGTTTGTACCAAGAACATTGCACATAA...CATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGTAATTACCTGTAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTATCTGAAGTACTATTaGTTGGAAGCCCTTCTTCGG +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNYLKYY*LEALLR
Trigger: CCGAAGAAGGGCTTCCAACAAATAGTACTTCAGATA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp ACTTTCCTTGGCAGTTTTACACAGGATCACTGCAAATGGGTAAAATGTCATGAATTTCTGTTGTACGATTaGTCTGTCCTCCACTCATTT +
Preference number: 5 (lower is better)
Translates to: TFLGSFTQDHCKWVKCHEFLLYD*SVLHSF
Trigger: AAATGAGTGGAGGACAGACAAATCGTACAACAGAAA...TTCATGACATTTTACCCATTTGCAGTGATCCTGTGTAAAACTGCCAAGGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACAGCCTTTTTGGTTGGTaGTGGTTCTGTTTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNSLFGW*WFCFCC
Trigger: ACAACAGAAACAGAACCACAACCAACCAAAAAGGCT...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CCATGTTATAAATGCAAAGAAATGCCACCTTGGAAGTTGCACATTATGGGAAGACCTTCTGCTCTCTCTTaGTTAAAACGAAAGAGATTT +
Preference number: 5 (lower is better)
Translates to: PCYKCKEMPPWKLHIMGRPSALS*LKRKRF
Trigger: AAATCTCTTTCGTTTTAACAAAGAGAGAGCAGAAGG...TCTTCCCATAATGTGCAACTTCCAAGGTGGCATTTCTTTGCATTTATAACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTTTCGGATTAGCCAGTaGACTAATTCCTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNFRISQ*TNSFPT
Trigger: TGTAGGAAAGGAATTAGTCAACTGGCTAATCCGAAA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACATCCATCAACCATTGCTaGTCCAATTGCTATAGCTTG +
Preference number: 5 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTSINHC*SNCYSL
Trigger: CAAGCTATAGCAATTGGACAAGCAATGGTTGATGGA...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS-3UTR CAA 90 bp AAACCAAAGTGCAAATTCATGGAGTTTTACCATTCCATTACGGACAGTCTAAACTATGAGTTGCTTCTTTaGTGTATCTCCTCCATCTAC +
Preference number: 5 (lower is better)
Translates to: KPKCKFMEFYHSITDSLNYELLL*CISSIY
Trigger: GTAGATGGAGGAGATACACAAAAGAAGCAACTCATA...GTTTAGACTGTCCGTAATGGAATGGTAAAACTCCATGAATTTGCACTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS-3UTR CAA 90 bp CAAGAACTCATCTTTTTATGTGCAATGTTCTTGGTACAAACAAAGCCATTGACACCTTCTGCTCTCTCTTaGTTAAAACGAAAGAGATTT +
Preference number: 5 (lower is better)
Translates to: QELIFLCAMFLVQTKPLTPSALS*LKRKRF
Trigger: AAATCTCTTTCGTTTTAACAAAGAGAGAGCAGAAGG...TGTCAATGGCTTTGTTTGTACCAAGAACATTGCACATAAAAAGATGAGTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443896.5
CDS CCA 72 bp GCTCAGCCCCCGGAAGTCGGCCCCCGAGAGCGGCGGTaGGCTCCTCAGGCCGCGGACGGTTGCGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: AQPPEVGPRERR*APQAADGCGRK
Trigger: CTTCCTGCCGCAACCGTCCGCGGCCTGAGGAGCCCACCGCCGCTCTCGGGGGCCGACTTCCGGGGGCTGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264380.9
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
ENST00000443896.5
CDS CAA 90 bp AGTCGGCCCCCGAGAGCGGCGGTGGGCTCCTCAGGCCGCGGACGGTaGCGGCAGGAAGCGAAGCTGCTTACATGGTTGATGCGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: SRPPRAAVGSSGRGR*RQEAKLLTWLMRLL
Trigger: GAGAAGCCGCATCAACCATGTAAGCAGCTTCGCTTCCTGCCGCAACCGTCCGCGGCCTGAGGAGCCCACCGCCGCTCTCGGGGGCCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS GCA 72 bp TATCATCCTCAGTTGCATAGAAGGCAGCTCCTGATTTaGCTCCCCGGGCCTGCCAGGGTGATGAGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: YHPQLHRRQLLI*LPGPARVMSGR
Trigger: TCTCCCACTCATCACCCTGGCAGGCCCGGGGAGGCAAATCAGGAGCTGCCTTCTATGCAACTGAGGATGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 72 bp CCTGATTTGCCTCCCCGGGCCTGCCAGGGTGATGAGTaGGAGAGGGAACGAATGAAATCTTCTTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: PDLPPRACQGDE*ERERMKSSSLL
Trigger: CAGCAGTGAAGAAGATTTCATTCGTTCCCTCTCCCACTCATCACCCTGGCAGGCCCGGGGAGGCAAATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 72 bp GCCCAGCTGTCCAGCCTGTGTTTGGATTCCAGATGGTaGCTACCTCCTACCTTTTTGGTCAGCAGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: AQLSSLCLDSRW*LPPTFLVSRVR
Trigger: CCTCACCCTGCTGACCAAAAAGGTAGGAGGTAGTCACCATCTGGAATCCAAACACAGGCTGGACAGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS CCA 72 bp CCTACCTTTTTGGTCAGCAGGGTGAGGGGGCACATGTaGGTACTTGGAGGGCTTCTTGATATGGAAGTTCAC +
Preference number: 6 (lower is better)
Translates to: PTFLVSRVRGHM*VLGGLLDMEVH
Trigger: GTGAACTTCCATATCAAGAAGCCCTCCAAGTACCCACATGTGCCCCCTCACCCTGCTGACCAAAAAGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
CDS TCA 72 bp TTGGCAATGAGTGACTCAAAGACCGACTGCAGTTGCTaGGGGGTATCTACAGAGGAAGACATGAGCCTTGCT +
Preference number: 6 (lower is better)
Translates to: LAMSDSKTDCSC*GVSTEEDMSLA
Trigger: AGCAAGGCTCATGTCTTCCTCTGTAGATACCCCTCAGCAACTGCAGTCGGTCTTTGAGTCACTCATTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS TCA 72 bp TCAGACATGACTTCAGGTGGCGTAGGCAATTGGAGATaGGTAGAACTGGTGGAGCTCTGGCTGGACAAAGTT +
Preference number: 6 (lower is better)
Translates to: SDMTSGGVGNWR*VELVELWLDKV
Trigger: AACTTTGTCCAGCCAGAGCTCCACCAGTTCTACTCATCTCCAATTGCCTACGCCACCTGAAGTCATGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CAA 90 bp TTCAGACCCAAGCCTGTCCAGTGGTCTGGTACCATTAGGAAATACTaGTCCATTGCCTCACAAAACCTAGTCCTGTACAACTCCGGAGAC +
Preference number: 6 (lower is better)
Translates to: FRPKPVQWSGTIRKY*SIASQNLVLYNSGD
Trigger: GTCTCCGGAGTTGTACAGGACTAGGTTTTGTGAGGCAATGGACAAGTATTTCCTAATGGTACCAGACCACTGGACAGGCTTGGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 72 bp GAGTTCCTCATTAAGCTGCTTTTTATAAGGTGTGGGTaGCCTAACAGACTGTGTCCTCGAAGGGAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: EFLIKLLFIRCG*PNRLCPRRELR
Trigger: CCTCAGCTCCCTTCGAGGACACAGTCTGTTAGGTCACCCACACCTTATAAAAAGCAGCTTAATGAGGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264380.9
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
ENST00000422495.5
ENST00000443896.5
ENST00000452564.1
CDS TCA 72 bp CAGCACTTCACAGAGACTTTGTTTCTTGGCAATGAGTaGCTCAAAGACCGACTGCAGTTGCTGAGGGGTATC +
Preference number: 6 (lower is better)
Translates to: QHFTETLFLGNE*LKDRLQLLRGI
Trigger: GATACCCCTCAGCAACTGCAGTCGGTCTTTGAGTCACTCATTGCCAAGAAACAAAGTCTCTGTGAAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS GCA 72 bp TTTTCCTTCACTTGGCTGTCTGTGGATCCCAGCAAATaGCCATCAAACACATCTTCGGAACTGCTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: FSFTWLSVDPSK*PSNTSSELLAV
Trigger: TACAGCCAGCAGTTCCGAAGATGTGTTTGATGGGCATTTGCTGGGATCCACAGACAGCCAAGTGAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 72 bp AAGGGTCTGAATTTTTGGGCTGAATTCTTCCTCCTCTaGCTCGATAATCGGCCAGCATTCTACCCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: KGLNFWAEFFLL*LDNRPAFYPSS
Trigger: AGAGCTTGGGTAGAATGCTGGCCGATTATCGAGCCAGAGGAGGAAGAATTCAGCCCAAAAATTCAGACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS CAA 90 bp CTGCAGTTGCTGAGGGGTATCTACAGAGGAAGACATGAGCCTTGCTaGCATCTTCTCAATCCAGTTCTTGAACTCACCTTCTTCCATCTC +
Preference number: 6 (lower is better)
Translates to: LQLLRGIYRGRHEPC*HLLNPVLELTFFHL
Trigger: GAGATGGAAGAAGGTGAGTTCAAGAACTGGATTGAGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTAGATACCCCTCAGCAACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS TCA 72 bp CTATTTGTTGGAAGCCCTTCTTCGGCACTGTTCCACTaGGTCGCTTTAGACAATTCCTCTAAGGCATTTCGG +
Preference number: 6 (lower is better)
Translates to: LFVGSPSSALFH*VALDNSSKAFR
Trigger: CCGAAATGCCTTAGAGGAATTGTCTAAAGCGACTCAGTGGAACAGTGCCGAAGAAGGGCTTCCAACAAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS GCA 72 bp TTGCTGAGGGGTATCTACAGAGGAAGACATGAGCCTTaGTTGCATCTTCTCAATCCAGTTCTTGAACTCACC +
Preference number: 6 (lower is better)
Translates to: LLRGIYRGRHEP*LHLLNPVLELT
Trigger: GGTGAGTTCAAGAACTGGATTGAGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTAGATACCCCTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS GCA 72 bp GGTCTCTTTCTACCCTTTTCCTGTTGGAAAAGGTCCTaGAACCTGTTATTCCAAGCTTGCAGCACTTCACAG +
Preference number: 6 (lower is better)
Translates to: GLFLPFSCWKRS*NLLFQACSTSQ
Trigger: CTGTGAAGTGCTGCAAGCTTGGAATAACAGGTTGCAGGACCTTTTCCAACAGGAAAAGGGTAGAAAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 72 bp AGGAGATCGAGGCAAATCATTAGCAGAGTCCAGTGTTaGGGACGTCTTATCATCTGTGGCCATTTCATGAGT +
Preference number: 6 (lower is better)
Translates to: RRSRQIISRVQC*GRLIICGHFMS
Trigger: ACTCATGAAATGGCCACAGATGATAAGACGTCCCCAACACTGGACTCTGCTAATGATTTGCCTCGATCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264380.9
ENST00000308862.10
ENST00000392202.7
ENST00000407449.5
ENST00000422495.5
ENST00000443896.5
ENST00000452564.1
CDS CCA 72 bp CTTGGCCATGAACAAAGCGCCGAATATGATGTACCATaGGGGTATCACAGAACATGCTTGGACACTGATAAG +
Preference number: 6 (lower is better)
Translates to: LGHEQSAEYDVP*GYHRTCLDTDK
Trigger: CTTATCAGTGTCCAAGCATGTTCTGTGATACCCCCATGGTACATCATATTCGGCGCTTTGTTCATGGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS CCA 72 bp GGAGGAACTGAAGGTCTCTTTCTACCCTTTTCCTGTTaGAAAAGGTCCTGCAACCTGTTATTCCAAGCTTGC +
Preference number: 6 (lower is better)
Translates to: GGTEGLFLPFSC*KRSCNLLFQAC
Trigger: GCAAGCTTGGAATAACAGGTTGCAGGACCTTTTCCAACAGGAAAAGGGTAGAAAGAGACCTTCAGTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CAA 72 bp CTGAGGGGTATCTACAGAGGAAGACATGAGCCTTGCTaGCATCTTCTCAATCCAGTTCTTGAACTCACCTTC +
Preference number: 6 (lower is better)
Translates to: LRGIYRGRHEPC*HLLNPVLELTF
Trigger: GAAGGTGAGTTCAAGAACTGGATTGAGAAGATGCAAGCAAGGCTCATGTCTTCCTCTGTAGATACCCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS GCA 72 bp TCCATTCTGAAGTCCTGGAGAAATATTCCGTGGAGATaGATCCATCGCACTTATCTTGCTTTCTTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: SILKSWRNIPWR*IHRTYLAFFPL
Trigger: CAAGGGGAAGAAAGCAAGATAAGTGCGATGGATGCATCTCCACGGAATATTTCTCCAGGACTTCAGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 72 bp CAACGACTGCAGAAAATCTGCCCACATAGTCGGCAATaGTGTCTGCGCCTAAAGGTTGTAAATTTCTCACTA +
Preference number: 6 (lower is better)
Translates to: QRLQKICPHSRQ*CLRLKVVNFSL
Trigger: TAGTGAGAAATTTACAACCTTTAGGCGCAGACACCATTGCCGACTATGTGGGCAGATTTTCTGCAGTCGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264380.9
ENST00000407449.5
ENST00000422495.5
ENST00000452564.1
CDS CCA 72 bp GGGAGTCACTATGGATCGAGGTTCTCAGCACAGCTTTaGAATGAGAACGAATATATAGAGGGTTGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: GSHYGSRFSAQL*NENEYIEGCLE
Trigger: TTCGAGACAACCCTCTATATATTCGTTCTCATTCCAAAGCTGTGCTGAGAACCTCGATCCATAGTGACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CAA 72 bp AAGCCTGTCCAGTGGTCTGGTACCATTAGGAAATACTaGTCCATTGCCTCACAAAACCTAGTCCTGTACAAC +
Preference number: 6 (lower is better)
Translates to: KPVQWSGTIRKY*SIASQNLVLYN
Trigger: GTTGTACAGGACTAGGTTTTGTGAGGCAATGGACAAGTATTTCCTAATGGTACCAGACCACTGGACAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CAA 72 bp ATAGCACTCTTTACATTGGCTATCTGGCATCCAGTATaGTTTCAGGTCACTATCCTGGCTTTTCCCCTCCAT +
Preference number: 6 (lower is better)
Translates to: IALFTLAIWHPV*FQVTILAFPLH
Trigger: ATGGAGGGGAAAAGCCAGGATAGTGACCTGAAACAATACTGGATGCCAGATAGCCAATGTAAAGAGTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264380.9
ENST00000407449.5
ENST00000422495.5
ENST00000452564.1
CDS CAA 72 bp CTGTTGGAAAAGGTCCTGCAACCTGTTATTCCAAGCTaGCAGCACTTCACAGAGACTTTGTTTCTTGGCAAT +
Preference number: 6 (lower is better)
Translates to: LLEKVLQPVIPS*QHFTETLFLGN
Trigger: ATTGCCAAGAAACAAAGTCTCTGTGAAGTGCTGCAAGCTTGGAATAACAGGTTGCAGGACCTTTTCCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000474721.1
CDS CAA 72 bp TTCCTGGAAGCAAATTTGCAAAGATGGCTTTCATGGTaGACTTTTCCTTCACTTGGCTGTCTGTGGATCCCA +
Preference number: 6 (lower is better)
Translates to: FLEANLQRWLSW*TFPSLGCLWIP
Trigger: TGGGATCCACAGACAGCCAAGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTGCAAATTTGCTTCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CAA 90 bp ACAGCATCACTCAGAATAAGCCCTCTCTCTTCATCACCCTCATTTTaGCTTCCTGATTGGCCACTTGAAGTACTTGATGCATCCTTTGAA +
Preference number: 6 (lower is better)
Translates to: TASLRISPLSSSPSF*LPDWPLEVLDASFE
Trigger: TTCAAAGGATGCATCAAGTACTTCAAGTGGCCAATCAGGAAGCAAAAATGAGGGTGATGAAGAGAGAGGGCTTATTCTGAGTGATGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS CAA 90 bp TATAGCTATTTCCTGGAAGCAAATTTGCAAAGATGGCTTTCATGGTaGACTTTTCCTTCACTTGGCTGTCTGTGGATCCCAGCAAATGCC +
Preference number: 6 (lower is better)
Translates to: YSYFLEANLQRWLSW*TFPSLGCLWIPANA
Trigger: GGCATTTGCTGGGATCCACAGACAGCCAAGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTGCAAATTTGCTTCCAGGAAATAGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS GCA 72 bp AATGAGCATAACTTAAGGCTATTTTTCTACAATATGTaGAAGCTCGGAGGTCTCCTGTGTTCTCCTGGGGAT +
Preference number: 6 (lower is better)
Translates to: NEHNLRLFFYNM*KLGGLLCSPGD
Trigger: ATCCCCAGGAGAACACAGGAGACCTCCGAGCTTGCACATATTGTAGAAAAATAGCCTTAAGTTATGCTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308862.10
CDS GCA 72 bp AATGAGCATAACTTAAGGCTATTTTTCTACAATATGTaGAAGCTCGGAGGTCTCCTAATGCTGAAGAGCGCC +
Preference number: 6 (lower is better)
Translates to: NEHNLRLFFYNM*KLGGLLMLKSA
Trigger: GGCGCTCTTCAGCATTAGGAGACCTCCGAGCTTGCACATATTGTAGAAAAATAGCCTTAAGTTATGCTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392202.7
CDS CAA 72 bp GTCTCCTGTATAGCCCATAAATTTTCCAGGGATTTCTaGATTACAGCAACGACTGCAGAAAATCTGCCCACA +
Preference number: 6 (lower is better)
Translates to: VSCIAHKFSRDF*ITATTAENLPT
Trigger: TGTGGGCAGATTTTCTGCAGTCGTTGCTGTAATCAAGAAATCCCTGGAAAATTTATGGGCTATACAGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264380.9
ENST00000407449.5
ENST00000422495.5
ENST00000452564.1
CDS CAA 72 bp CAGAAGCCTTTTTGGTTGGTTGTGGTTCTGTTTCTGTaGTACGATTTGTCTGTCCTCCACTCATTTCAGGTA +
Preference number: 6 (lower is better)
Translates to: QKPFWLVVVLFL*YDLSVLHSFQV
Trigger: TACCTGAAATGAGTGGAGGACAGACAAATCGTACAACAGAAACAGAACCACAACCAACCAAAAAGGCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 72 bp CAGATTCTACACCAGGAATATGTAAGAATTGTATGCTaGTATCCAGGTACTGGAGAATCCAACTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: QILHQEYVRIVC*YPGTGESNSFR
Trigger: CCTGAAGGAGTTGGATTCTCCAGTACCTGGATATCAGCATACAATTCTTACATATTCCTGGTGTAGAATCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS CCA 72 bp TTTTTCTCCATTCTGAAGTCCTGGAGAAATATTCCGTaGAGATGCATCCATCGCACTTATCTTGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: FFSILKSWRNIP*RCIHRTYLAFF
Trigger: GAAGAAAGCAAGATAAGTGCGATGGATGCATCTCCACGGAATATTTCTCCAGGACTTCAGAATGGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS CCA 72 bp TATTTCCTGGAAGCAAATTTGCAAAGATGGCTTTCATaGTTGACTTTTCCTTCACTTGGCTGTCTGTGGATC +
Preference number: 6 (lower is better)
Translates to: YFLEANLQRWLS*LTFPSLGCLWI
Trigger: GATCCACAGACAGCCAAGTGAAGGAAAAGTCAACCATGAAAGCCATCTTTGCAAATTTGCTTCCAGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264380.9
CDS TCA 72 bp GTGCCCATAAAACCTAAGTTCAAGGTATTTTGCAAATaGCATAGACCAGGACTCATTGGAAAGAGCAACAAC +
Preference number: 6 (lower is better)
Translates to: VPIKPKFKVFCK*HRPGLIGKSNN
Trigger: GTTGTTGCTCTTTCCAATGAGTCCTGGTCTATGTCATTTGCAAAATACCTTGAACTTAGGTTTTATGGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264380.9
ENST00000452564.1
CDS CAA 72 bp TTGAAGTTCCACATGAGGATTTATGAGTTGCTTCTTTaGTGTATCTCCTCCATCTACTTCATCTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: LKFHMRIYELLL*CISSIYFILRL
Trigger: GAGCCTCAAGATGAAGTAGATGGAGGAGATACACAAAAGAAGCAACTCATAAATCCTCATGTGGAACTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264380.9