RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3R6 (Homo sapiens)

Ensembl gene IDs: ENSG00000276231

Ensembl transcript IDs: ENST00000611951.4, ENST00000613555.4, ENST00000619866.5

Found 605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCCCCAGAGCCGCCTGCAGGGCGTGGGAGACCACGTGGCGCATaGAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCA +
Preference number: 1 (lower is better)
Translates to: PPPEPPAGRGRPRGA*RSLVSAAPGPPRSP
Trigger: TGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCGGCTCTGGGGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp CCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTaGAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCC +
Preference number: 1 (lower is better)
Translates to: PFALQPGSLHLRAAG*RQLISPRGKVPLNA
Trigger: GGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp GCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTaGACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGC +
Preference number: 1 (lower is better)
Translates to: AHQPPWEGPAQCRCQ*TAQKPGPTPGPAGG
Trigger: GCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 90 bp CTCTTGGACAAGGTCACCTGCAGCTTCCTGTGCAGAGCGCCTGCGTaGCAGGCCTCCCCCAGAGCCGCCTGCAGGGCGTGGGAGACCACG +
Preference number: 1 (lower is better)
Translates to: LLDKVTCSFLCRAPA*QASPRAACRAWETT
Trigger: CGTGGTCTCCCACGCCCTGCAGGCGGCTCTGGGGGAGGCCTGTCACGCAGGCGCTCTGCACAGGAAGCTGCAGGTGACCTTGTCCAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CCA 90 bp CCTCCAGCCTCTCTACGTGTCCCTCCCGGCTCGGGCTGGCCTCGCTaGCCATCTGCTCCAAGGCGGCCACCACGGCGTGGAAATAGTGCT +
Preference number: 1 (lower is better)
Translates to: PPASLRVPPGSGWPR*PSAPRRPPRRGNSA
Trigger: AGCACTATTTCCACGCCGTGGTGGCCGCCTTGGAGCAGATGGCCAGCGAGGCCAGCCCGAGCCGGGAGGGACACGTAGAGAGGCTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR GCA 90 bp TGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTaGTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCAC +
Preference number: 1 (lower is better)
Translates to: CRAWETTWRMQVSGV*CAWAASISSSRALH
Trigger: GTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp CGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATaGCGCTGTCAGTGGACAGCACAGAAACCCGGGCCAACTCCCGGT +
Preference number: 1 (lower is better)
Translates to: RVQAAHQPPWEGPAQ*RCQWTAQKPGPTPG
Trigger: ACCGGGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp AAGAAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTaGAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTGCAGGCAGC +
Preference number: 1 (lower is better)
Translates to: KKSRGHARFLMPPLR*SPARSISGLPGAGS
Trigger: GCTGCCTGCACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp CATCACAGTCCCCAGGGTAGGCTCCCTGTGCTCCCAGGCACTCGCTaGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTG +
Preference number: 1 (lower is better)
Translates to: HHSPQGRLPVLPGTR*LLVKAKAAVWSRAL
Trigger: CAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGAGTGCCTGGGAGCACAGGGAGCCTACCCTGGGGACTGTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR TCA 90 bp CCCAGCTGCCAGGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTaGTGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGC +
Preference number: 1 (lower is better)
Translates to: PSCQASRSPGAMHAS*CPLCAAARLAPSQG
Trigger: GCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCCTGGCAGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp AGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTaGGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACA +
Preference number: 1 (lower is better)
Translates to: RAWETTWRMQVSGVC*AWAASISSSRALHT
Trigger: TGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTaGAGATCCAAGACCTCCAAGTCAGCACTGAGGCGCAGCTGGGAT +
Preference number: 1 (lower is better)
Translates to: DSTETRANSRSGRRP*RSKTSKSALRRSWD
Trigger: ATCCCAGCTGCGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 90 bp GGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTaGGGCGCAGCTGGGATCTTGGGCGGAGGAAGAGCACCAGTTCCT +
Preference number: 1 (lower is better)
Translates to: GPAGGPADPRPPSQH*GAAGILGGGRAPVP
Trigger: AGGAACTGGTGCTCTTCCTCCGCCCAAGATCCCAGCTGCGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp TGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTaGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACGCA +
Preference number: 1 (lower is better)
Translates to: WETTWRMQVSGVCCA*AASISSSRALHTDA
Trigger: TGCGTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp GCTCCATCTCAGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTaGGAAGGTCCCGCTCAATGCCGCTGTCAGTGGACAGCACAGAAA +
Preference number: 1 (lower is better)
Translates to: APSQGCRVQAAHQPP*EGPAQCRCQWTAQK
Trigger: TTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTGAGATGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp TCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTaGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCAGCTCTCCC +
Preference number: 1 (lower is better)
Translates to: SASLWMAGHSVLTLL*YHGSTRPRNVASSP
Trigger: GGGAGAGCTGGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 90 bp GCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGGTGTaGGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: AKAAVWSRALLWLLV*VFGVGGVVYPSSWA
Trigger: GGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR GCA 90 bp GTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTaGACACAGACGCAGACACCAGCTCAGGATCCACGAAGAGGAACA +
Preference number: 1 (lower is better)
Translates to: VSAAPGPPRSPVAEH*TQTQTPAQDPRRGT
Trigger: TGTTCCTCTTCGTGGATCCTGAGCTGGTGTCTGCGTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp GAGCCGGGCCTTGCTCTGGCTGTTGGTGTGAGTGTTTGGAGTTGGTaGGGTAGTGTATCCTTCCTCCTGGGCCTGCTGTCCCTGCAGGCT +
Preference number: 1 (lower is better)
Translates to: EPGLALAVGVSVWSW*GSVSFLLGLLSLQA
Trigger: AGCCTGCAGGGACAGCAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAACAGCCAGAGCAAGGCCCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp TGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGGTGTGAGTGTTTaGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGCTGTCC +
Preference number: 1 (lower is better)
Translates to: CRVEPGLALAVGVSV*SWWGSVSFLLGLLS
Trigger: GGACAGCAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAACAGCCAGAGCAAGGCCCGGCTCCACACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR CCA 90 bp CCACAAGTGGAAGGTGATGTAGGGGCTGGGCAGGGGAATGCTTGGTaGCCGCTCTTGGACAAGGTCACCTGCAGCTTCCTGTGCAGAGCG +
Preference number: 1 (lower is better)
Translates to: PQVEGDVGAGQGNAW*PLLDKVTCSFLCRA
Trigger: CGCTCTGCACAGGAAGCTGCAGGTGACCTTGTCCAAGAGCGGCCACCAAGCATTCCCCTGCCCAGCCCCTACATCACCTTCCACTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR TCA 90 bp GGGCAGGGAGCAACCTCGAATCTGACCACATCCCTGAAAGTGCGTTaGTCGTCCTTGTCCAGCGACAGTGTCAGCAGCCTCTGGTCCCGG +
Preference number: 1 (lower is better)
Translates to: GQGATSNLTTSLKVR*SSLSSDSVSSLWSR
Trigger: CCGGGACCAGAGGCTGCTGACACTGTCGCTGGACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGCTCCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CCA 90 bp ATTGAGCCACGGTGCCTTGGACTTCTGGGCCCCAGAACATGGTTCTaGGCAGGGAGCAACCTCGAATCCAAACACACCTCCCGAGGGGAA +
Preference number: 1 (lower is better)
Translates to: IEPRCLGLLGPRTWF*AGSNLESKHTSRGE
Trigger: TTCCCCTCGGGAGGTGTGTTTGGATTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR TCA 90 bp GCTGAGTGTATGCAGAGGCATCTGACCACATCCCTGAAAGTGCGTTaGTCGTCCTTGTCCAGCGACAGTGTCAGCAGCCTCTGGTCCCGG +
Preference number: 1 (lower is better)
Translates to: AECMQRHLTTSLKVR*SSLSSDSVSSLWSR
Trigger: CCGGGACCAGAGGCTGCTGACACTGTCGCTGGACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATGCCTCTGCATACACTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CCA 90 bp ATTGAGCCACGGTGCCTTGGACTTCTGGGCCCCAGAACATGGTTCTaGGCAGGGAGCAACCTCGAATCTGACCACATCCCTGAAAGTGCG +
Preference number: 1 (lower is better)
Translates to: IEPRCLGLLGPRTWF*AGSNLESDHIPESA
Trigger: CGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR GCA 90 bp TTTGATTGCTTCCACCTCCTGTTGCCCATGCAAATTGAGCCACGGTaGCTTGGACTTCTGGGCCCCAGAACATGGTTCTGGGCAGGGAGC +
Preference number: 1 (lower is better)
Translates to: FDCFHLLLPMQIEPR*LGLLGPRTWFWAGS
Trigger: GCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGTGGAAGCAATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp AGGGGCTTGGGCTTGGCTTTGATTGCTTCCACCTCCTGTTGCCCATaGAAATTGAGCCACGGTGCCTTGGACTTCTGGGCCCCAGAACAT +
Preference number: 1 (lower is better)
Translates to: RGLGLALIASTSCCP*KLSHGALDFWAPEH
Trigger: ATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp ATCAGAAGGGGCTTGGGCTTGGCTTTGATTGCTTCCACCTCCTGTTaGCCATGCAAATTGAGCCACGGTGCCTTGGACTTCTGGGCCCCA +
Preference number: 1 (lower is better)
Translates to: IRRGLGLALIASTSC*PCKLSHGALDFWAP
Trigger: TGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCCCCTTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp AAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTaGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTC +
Preference number: 1 (lower is better)
Translates to: KLGLVCMFSSSDSIA*AIRRPPCGPFLITV
Trigger: GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR CCA 90 bp ATGCAAATTGAGCCACGGTGCCTTGGACTTCTGGGCCCCAGAACATaGTTCTGGGCAGGGAGCAACCTCGAATCCAAACACACCTCCCGA +
Preference number: 1 (lower is better)
Translates to: MQIEPRCLGLLGPRT*FWAGSNLESKHTSR
Trigger: TCGGGAGGTGTGTTTGGATTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR TCA 90 bp CTGACATTTTTCTCTCACCTGATAGAGACACCTGCCTGGGCTGAGTaGGGTGGGCAGTGGCCTGAGAGTGGGAAGGGAAGAGACTTGGGA +
Preference number: 1 (lower is better)
Translates to: LTFFSHLIETPAWAE*GGQWPESGKGRDLG
Trigger: TCCCAAGTCTCTTCCCTTCCCACTCTCAGGCCACTGCCCACCTCACTCAGCCCAGGCAGGTGTCTCTATCAGGTGAGAGAAAAATGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR CCA 90 bp TCGTCCTTGTCCAGCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTaGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAG +
Preference number: 1 (lower is better)
Translates to: SSLSSDSVSSLWSRL*IWILFVLKVLVTVE
Trigger: CTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGCTGGACAAGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 90 bp ATGCAAATTGAGCCACGGTGCCTTGGACTTCTGGGCCCCAGAACATaGTTCTGGGCAGGGAGCAACCTCGAATCTGACCACATCCCTGAA +
Preference number: 1 (lower is better)
Translates to: MQIEPRCLGLLGPRT*FWAGSNLESDHIPE
Trigger: TTCAGGGATGTGGTCAGATTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CCA 90 bp TTGTCCAGCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTaGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGAC +
Preference number: 1 (lower is better)
Translates to: LSSDSVSSLWSRLWI*ILFVLKVLVTVEKD
Trigger: GTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGCTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp GAATGTGTTGATGGGCATCAGAAGGGGCTTGGGCTTGGCTTTGATTaGTTCCACCTCCTGTTGCCCATGCAAATTGAGCCACGGTGCCTT +
Preference number: 1 (lower is better)
Translates to: ECVDGHQKGLGLGFD*FHLLLPMQIEPRCL
Trigger: AAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCCCCTTCTGATGCCCATCAACACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 90 bp CGTCAAGTTCTGTTCGGCAATGACCATCCTTTGGTACAGTGTCCCTaGAAACCAGACCACTTTGGCCAAACAGCCCCCAAGTCTCTGACT +
Preference number: 1 (lower is better)
Translates to: RQVLFGNDHPLVQCP*KPDHFGQTAPKSLT
Trigger: AGTCAGAGACTTGGGGGCTGTTTGGCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR TCA 90 bp GGAATGATGACATGCCGGAGGTCCTGGCTTTCCGCCTTCTGTTTCTaGCAAGTGATGCGGGTTTTCCATTTGTGGTCGCGTTATAGTGCT +
Preference number: 1 (lower is better)
Translates to: GMMTCRRSWLSAFCF*QVMRVFHLWSRYSA
Trigger: AGCACTATAACGCGACCACAAATGGAAAACCCGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 90 bp TCTCCTGGTAGGGATACAGCTCATTCGTCAAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTGTCCCTGGGACAGCCATCTCCGTTT +
Preference number: 1 (lower is better)
Translates to: SPGRDTAHSSSSVRQ*PSFGTVSLGQPSPF
Trigger: AAACGGAGATGGCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAGCTGTATCCCTACCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CCA 90 bp GGATACAGCTCATTCGTCAAGTTCTGTTCGGCAATGACCATCCTTTaGTACAGTGTCCCTGCAAACCAGACCACTTTGGCCAAACAGCCC +
Preference number: 1 (lower is better)
Translates to: GYSSFVKFCSAMTIL*YSVPANQTTLAKQP
Trigger: GGGCTGTTTGGCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAGCTGTATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR TCA 90 bp TCTCCTGGTAGGGATACAGCTCATTCGTCAAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTGTCCCTGCAAACCAGACCACTTTGG +
Preference number: 1 (lower is better)
Translates to: SPGRDTAHSSSSVRQ*PSFGTVSLQTRPLW
Trigger: CCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAGCTGTATCCCTACCAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR GCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGTCTCTGGTGTCTGCTaGGCCTGGGCCGCCTCGATC +
Preference number: 2 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSVSGVC*AWAASI
Trigger: GATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGAC...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp TCCTCCAGCCTCTCTACGTGTCCCTCCCGGCTCGGGCTGGCCTCGCTGGCCATCTCCCCCAGAGCCGCCTaGAGGGCGTGGGAGACCACG +
Preference number: 2 (lower is better)
Translates to: SSSLSTCPSRLGLASLAISPRAA*RAWETT
Trigger: CGTGGTCTCCCACGCCCTGCAGGCGGCTCTGGGGGA...GATGGCCAGCGAGGCCAGCCCGAGCCGGGAGGGACACGTAGAGAGGCTGGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR GCA 90 bp AGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATTCCCCCAGAGCCGCCTaGAGGGCGTGGGAGACCACG +
Preference number: 2 (lower is better)
Translates to: RAAGCRQLISPRGKVPLNSPRAA*RAWETT
Trigger: CGTGGTCTCCCACGCCCTGCAGGCGGCTCTGGGGGA...ATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCAATAGTGCTCCAGGGTaGGGCGAGGGCTGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSNSAPG*GEGWPA
Trigger: TGCAGGCCAGCCCTCGCCGCACCCTGGAGCACTATT...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CCA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGGTGTCTGCTGCGCCTaGGCCGCCTCGATCTCCAGT +
Preference number: 2 (lower is better)
Translates to: AGCRQLISPRGKVPLNAAGVCCA*AASISS
Trigger: ACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACC...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCAGACCACGTGGCGCATaGAGGTCTCTGGTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSRPRGA*RSLVSA
Trigger: AGCAGACACCAGAGACCTGCATGCGCCACGTGGTCT...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTGGGTGCGGCGAGGGCTaGCCTGCAGCTTCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSGCGEG*PAASCA
Trigger: TGCACAGGAAGCTGCAGGCCAGCCCTCGCCGCACCC...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CAA 90 bp GGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTaGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTGCA +
Preference number: 2 (lower is better)
Translates to: GIKKSRGHARFLMPP*RCSPARSISGLPGA
Trigger: TGCACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR TCA 90 bp ATCAGCCCAGTGGCCCGCAGGGAAACGGTGACCTCTCGGGGCCGGTGGCTAAGCAGGTGTGGAGGCTTTTaGGCTCCCCGGTATCCTGGG +
Preference number: 2 (lower is better)
Translates to: ISPVARRETVTSRGRWLSRCGGF*APRYPG
Trigger: CCCAGGATACCGGGGAGCTCAAAAGCCTCCACACCT...GCTTAGCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGGCCACTGGGCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR TCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCCAGCCCCCAAGTCTCTaGCTCCCATTCTCCACCTTC +
Preference number: 2 (lower is better)
Translates to: DSTETRANSRSGRRPCRSQPPSL*LPFSTF
Trigger: GAAGGTGGAGAATGGGAGTCAGAGACTTGGGGGCTG...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR TCA 90 bp CTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCAGCTCTCCCAGCTCCGGTCCACAAGTGGAAGGTaGTGTAGGGGCTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LVPRVYAAQERSQLSQLRSTSGR*CRGWAG
Trigger: CCCTGCCCAGCCCCTACATCACCTTCCACTTGTGGA...CCGGAGCTGGGAGAGCTGGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGCGGCGAGGGCTGGCCTaGAGCTTCCTGTGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: GISASLWMAGHSVLTLLWRRGLA*SFLCRA
Trigger: CGCTCTGCACAGGAAGCTGCAGGCCAGCCCTCGCCG...CCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CCA 90 bp GCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGGTGCAGCCCTTCCTACAGAAGGTGTaGAGGCTTTTGAGCTCCCCG +
Preference number: 2 (lower is better)
Translates to: AGQHFPIPTGPACPPVQPFLQKV*RLLSSP
Trigger: CGGGGAGCTCAAAAGCCTCCACACCTTCTGTAGGAA...GGGCTGCACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CCA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTCTTGGTGGCCGCTCTTaGACAAGGTCACCACCGCAG +
Preference number: 2 (lower is better)
Translates to: LMPPLRCSPARSISGLPGLGGRS*TRSPPQ
Trigger: CTGCGGTGGTGACCTTGTCCAAGAGCGGCCACCAAG...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CCA 90 bp CCATCTCAGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCCAATGCCGCTGTCAGTaGACAGCACAGAAACCCGGG +
Preference number: 2 (lower is better)
Translates to: PSQGCRVQAAHQPPWEGPQCRCQ*TAQKPG
Trigger: CCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTG...GGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTGAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 90 bp GGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTaGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GISASLWMAGHSVLT*LWYHGSTRPRNVAS
Trigger: GCTGGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACAGTCCAAGGCGACTGTaGAGTAGGGGGTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: VCCAWAASISSSRALHTDSPRRL*SRGWAG
Trigger: CCCTGCCCACCCCCTACTGCACAGTCGCCTTGGACT...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp CTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGCCAGTAGCAGAGCACTaGACACAGACGCAGACACCA +
Preference number: 2 (lower is better)
Translates to: LDAPFALQPGSLHLRAAGPVAEH*TQTQTP
Trigger: TGGTGTCTGCGTCTGTGTGCAGTGCTCTGCTACTGG...CCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp CCCAGCATCCTGTCATCTCCGAGCACAAGTACCCGGGCTGTGTGCAGCCGGGACGGCTGGGCAGGGGAATaGTTGGTGGCCGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: PSILSSPSTSTRAVCSRDGWAGE*LVAALG
Trigger: TCCAAGAGCGGCCACCAAGCATTCCCCTGCCCAGCC...GTCCCGGCTGCACACAGCCCGGGTACTTGTGCTCGGAGATGACAGGATGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAGTTCCTTCCAGAGCTaGTCCTCACCGGTCCACAAG +
Preference number: 2 (lower is better)
Translates to: DSTETRANSRSGRRPCRSSSFQS*SSPVHK
Trigger: CTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACT...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp TCCAGGGAAGGAGGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGGCGTGGGAGACCACGTaGCGCATGCAGGTCTCTGGT +
Preference number: 2 (lower is better)
Translates to: SREGGISASLWMAGHSVLAWETT*RMQVSG
Trigger: ACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGC...CAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCCTCCTTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 90 bp GAAGGAGGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTaGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTA +
Preference number: 2 (lower is better)
Translates to: EGGISASLWMAGHSV*TLLWYHGSTRPRNV
Trigger: TACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCCTCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR TCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCGCCATGCACGCTTCTTaGTGCCCCCTTTGCGCTGCA +
Preference number: 2 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLAMHAS*CPLCAA
Trigger: TGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGC...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp ATCAGCCCAGTGGCCCGCAGGGAAACGGTGACCTCTCGGGGCCGGTGGCTAAGCAAGGGAATGATGACATaGCGGAGGTCCTGGCTTTCC +
Preference number: 2 (lower is better)
Translates to: ISPVARRETVTSRGRWLSKGMMT*RRSWLS
Trigger: GGAAAGCCAGGACCTCCGGCATGTCATCATTCCCTT...GCTTAGCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGGCCACTGGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGGAAGTCCAGGGGCCATaGACGCTTCTTGATGCCCCC +
Preference number: 2 (lower is better)
Translates to: GISASLWMAGHSVLTLLWEVQGP*TLLDAP
Trigger: GGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTC...CCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCGAAGTCCAGGGGCCATaGACGCTTCTTGATGCCCCC +
Preference number: 2 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLEVQGP*TLLDAP
Trigger: GGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTC...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp GGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAACATGCCGGAGGTCCTaGCTTTCCGCCTTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: GACRSLVSAAPGPPRSPVTCRRS*LSAFCF
Trigger: GAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGT...TACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGCAAACCAGACCACTTTaGCCAAACAGCCCCCAAGTC +
Preference number: 2 (lower is better)
Translates to: PVRPEALQIQDLQVSTEAQTRPL*PNSPQV
Trigger: GACTTGGGGGCTGTTTGGCCAAAGTGGTCTGGTTTG...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR TCA 90 bp GGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGGGTAGAGCTCTTCTGTaGTTCCTGTGGCATTACAGT +
Preference number: 2 (lower is better)
Translates to: GRGRPRGACRSLVSAAPGGRALL*FLWHYS
Trigger: ACTGTAATGCCACAGGAATCACAGAAGAGCTCTACC...CCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR-3UTR GCA 90 bp CCTGGGCCTGCTGTCCCTGCAGGCTCACTGGACAATACCAGAGAATGTGTTGATGCCTCGCTGGCCATCTaGTCCAAGGCGGCCACCACG +
Preference number: 2 (lower is better)
Translates to: PGPAVPAGSLDNTRECVDASLAI*SKAATT
Trigger: CGTGGTGGCCGCCTTGGAGCAGATGGCCAGCGAGGC...ATCAACACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR GCA 90 bp AGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCGAAGGTCCCGCTCAATaGCGCTGTCAGTGGACAGCA +
Preference number: 2 (lower is better)
Translates to: SVLTLLWYHGSTRPRNVAEGPAQ*RCQWTA
Trigger: TGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTC...GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACAGCTCCCCGGTATCCTaGGACAGCCATCTCCGTTTT +
Preference number: 2 (lower is better)
Translates to: VCCAWAASISSSRALHTDSSPVS*DSHLRF
Trigger: AAAACGGAGATGGCTGTCCCAGGATACCGGGGAGCT...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCGCGTGGGAGACCACGTaGCGCATGCAGGTCTCTGGT +
Preference number: 2 (lower is better)
Translates to: SEAELLGLPFPESVVGLGAWETT*RMQVSG
Trigger: ACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGC...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp GCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCGCTCATCAGCCCCCGTaGGAAGGTCCCGCTCAATGC +
Preference number: 2 (lower is better)
Translates to: ATVSAASGPGSGSGYCSSAHQPP*EGPAQC
Trigger: GCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGC...GGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGGCAATGACCATCCTTTaGTACAGTGTCCCTGGGACA +
Preference number: 2 (lower is better)
Translates to: PVRPEALQIQDLQVSTEAAMTIL*YSVPGT
Trigger: TGTCCCAGGGACACTGTACCAAAGGATGGTCATTGC...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR-3UTR TCA 90 bp CTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCTTCCTGTGGCCTTGGTaGGCACGTACATTACAGTGT +
Preference number: 2 (lower is better)
Translates to: LLDAPFALQPGSLHLRAAFLWPW*ARTLQC
Trigger: ACACTGTAATGTACGTGCTCACCAAGGCCACAGGAA...GGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR TCA 90 bp GTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTG +
Preference number: 2 (lower is better)
Translates to: VQGPCTLLDAPFALQPGSSSVRQ*PSFGTV
Trigger: CACTGTACCAAAGGATGGTCATTGCCGAACAGAACT...CGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGAAGGGAATGATGACATaGCGGAGGTCCTGGCTTTCC +
Preference number: 2 (lower is better)
Translates to: VSGVCCAWAASISSSRALKGMMT*RRSWLS
Trigger: GGAAAGCCAGGACCTCCGGCATGTCATCATTCCCTT...CAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp AGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCCCAGTAGCAGAGCACTaGACACAGACGCAGACACCA +
Preference number: 2 (lower is better)
Translates to: SVLTLLWYHGSTRPRNVAPVAEH*TQTQTP
Trigger: TGGTGTCTGCGTCTGTGTGCAGTGCTCTGCTACTGG...GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp GCTGCCTGGATGCTGCAGGCTTCTCAGGCGCCAGCACGGGGATGTAGTAGAGCTACATGCCGGAGGTCCTaGCTTTCCGCCTTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: AAWMLQASQAPARGCSRATCRRS*LSAFCF
Trigger: GAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGT...AGCTCTACTACATCCCCGTGCTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp AGCCTCTCTACGTGTCCCTCCCGGCTCGGGCTGGCCTCGCTGGCCATCTGCTCCGGGTCAGTAACCTTGTaGAAAAGGCATAGATTCTCT +
Preference number: 2 (lower is better)
Translates to: SLSTCPSRLGLASLAICSGSVTL*KRHRFS
Trigger: AGAGAATCTATGCCTTTTGCACAAGGTTACTGACCC...GGAGCAGATGGCCAGCGAGGCCAGCCCGAGCCGGGAGGGACACGTAGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CCA 90 bp CTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTTTTCCCCATCCCCACTaGGCCGGCCTGTCCTCCGGT +
Preference number: 2 (lower is better)
Translates to: LWSRLWIWILFVLKVLVTFPHPH*AGLSSG
Trigger: ACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAA...AGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp GTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGTTGGTACAGTGTCCCTaGGACAGCCATCTCCGTTTT +
Preference number: 2 (lower is better)
Translates to: VDGGAQRVDVALVPRVYALVQCP*DSHLRF
Trigger: AAAACGGAGATGGCTGTCCCAGGGACACTGTACCAA...CGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CAA 90 bp ATTGCTTCCACCTCCTGTTGCCCATGCAAATTGAGCCACGGTGCCTaGGACTTCTGGGCCCCAGAACATGGTTCTGGGCAGGGAGCAACC +
Preference number: 2 (lower is better)
Translates to: IASTSCCPCKLSHGA*DFWAPEHGSGQGAT
Trigger: GGTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGTGGAAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR TCA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTG +
Preference number: 2 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSSSVRQ*PSFGTV
Trigger: CACTGTACCAAAGGATGGTCATTGCCGAACAGAACT...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR TCA 90 bp CTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGGGTCTCCCGTTTCCTaGGTCTGTGGTAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LWSRLWIWILFVLKVLVTGSPVS*VCGRPG
Trigger: CCCAGGCCTACCACAGACTCAGGAAACGGGAGACCC...AGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCCAGGTCTCTGGTGTCTaGTGCGCCTGGGCCGCCTCG +
Preference number: 2 (lower is better)
Translates to: WILFVLKVLVTVEKDFPAQVSGV*CAWAAS
Trigger: CGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTG...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCAGTTCCTTCCAGAGCTaGTCCTCACCGGTCCACAAG +
Preference number: 2 (lower is better)
Translates to: SEAELLGLPFPESVVGLGSSFQS*SSPVHK
Trigger: CTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACT...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR TCA 90 bp TGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCAGGGAAACGGTaGCCTCTCGGGGCCGGTGGC +
Preference number: 2 (lower is better)
Translates to: WIWILFVLKVLVTVEKDFPAGKR*PLGAGG
Trigger: GCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGG...AAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCATGCCCCCTTTGCGCTaGAGCCCGGCTCGCTCCATC +
Preference number: 2 (lower is better)
Translates to: WILFVLKVLVTVEKDFPAMPPLR*SPARSI
Trigger: GATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCAT...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTCTGTGCAGTAGGGGGTaGGCAGGGTCAGTAACCTTG +
Preference number: 2 (lower is better)
Translates to: ALAKTAALTLVLRAGWGALCSRG*AGSVTL
Trigger: CAAGGTTACTGACCCTGCCCACCCCCTACTGCACAG...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 90 bp ATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATaGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCA +
Preference number: 2 (lower is better)
Translates to: MRSWAWCVCSQAATA*PGPSVDLHVGPSSS
Trigger: TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR-3UTR GCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCTTGGTACAGTGTCCCTaGAAACCAGACCACTTTGGC +
Preference number: 2 (lower is better)
Translates to: SEAELLGLPFPESVVGLGLVQCP*KPDHFG
Trigger: GCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAA...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CCA 90 bp GGGAGCAACCTCGAATCTGACCACATCCCTGAAAGTGCGTTGATCGTCCTTGTCCTGTGCAGTAGGGGGTaGGCAGGGTCAGTAACCTTG +
Preference number: 2 (lower is better)
Translates to: GSNLESDHIPESALIVLVLCSRG*AGSVTL
Trigger: CAAGGTTACTGACCCTGCCCACCCCCTACTGCACAG...GACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CAA 90 bp AGCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATaGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCC +
Preference number: 2 (lower is better)
Translates to: SDSVSSLWSRLWIWI*FVLKVLVTVEKDFP
Trigger: GGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp GGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCTGTGGCATTACAGTGTaGAGCAAGGGAATGATGACA +
Preference number: 2 (lower is better)
Translates to: GIKKSRGHARFLMPPLRCCGITV*SKGMMT
Trigger: TGTCATCATTCCCTTGCTGCACACTGTAATGCCACA...GCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CAA 90 bp AAGGACTTTCCCGCCAAGTTGGAGGACTTGACAACCTCTGTCACGTaGACATTCAGACATGTGTGGTCTGTGACAGGAGCAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KDFPAKLEDLTTSVT*TFRHVWSVTGAAGR
Trigger: CCTGCCTGCTGCTCCTGTCACAGACCACACATGTCTGAATGTCAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp ACCCAGCAGCGAGCAGTAAATCTCCTCCAGCCTCTCTACGTGTCCCTCCCGGCTACGTACATTACAGTGTaGAGCAAGGGAATGATGACA +
Preference number: 2 (lower is better)
Translates to: TQQRAVNLLQPLYVSLPATYITV*SKGMMT
Trigger: TGTCATCATTCCCTTGCTGCACACTGTAATGTACGT...AGCCGGGAGGGACACGTAGAGAGGCTGGAGGAGATTTACTGCTCGCTGCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR GCA 90 bp CCTGGGCCTGCTGTCCCTGCAGGCTCACTGGACAATACCAGAGAATGTGTTGATAATAGATGGGTTGGGTaGCCATGCGGATGTAGTAGG +
Preference number: 2 (lower is better)
Translates to: PGPAVPAGSLDNTRECVDNRWVG*PCGCSR
Trigger: CCTACTACATCCGCATGGGCACCCAACCCATCTATT...ATCAACACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp TGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTGCACTGAGGCGCAGCTaGGATCTTGGGCGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: WIWILFVLKVLVTVEKDFALRRS*DLGRRK
Trigger: CTTCCTCCGCCCAAGATCCCAGCTGCGCCTCAGTGC...AAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 90 bp GGGATACAGCTCATTCGTCAAGTTCTGTTCGGCAATGACCATCCTTaGGTACAGTGTCCCTGCAAACCAGACCACTTTGGCCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: GIQLIRQVLFGNDHP*VQCPCKPDHFGQTA
Trigger: GGCTGTTTGGCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAGCTGTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CAA 90 bp GTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCAAGTTGGAGGACTaGACAACCTCTGTCACGTTGACATTCAGACATGTGTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: VLVTVEKDFPAKLED*TTSVTLTFRHVWSV
Trigger: CACAGACCACACATGTCTGAATGTCAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTCCTTCTCTACAGTGACCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 90 bp GTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCAAGTaGGAGGACTTGACAACCTCTGTCACGTTGACATTCAGACATGTG +
Preference number: 2 (lower is better)
Translates to: VLKVLVTVEKDFPAK*EDLTTSVTLTFRHV
Trigger: CACATGTCTGAATGTCAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CCA 90 bp TGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCAGGGGAATGCTTGGTaGCCGCTCTTGGACAAGGTC +
Preference number: 2 (lower is better)
Translates to: WIWILFVLKVLVTVEKDFQGNAW*PLLDKV
Trigger: GACCTTGTCCAAGAGCGGCCACCAAGCATTCCCCTG...AAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp CAGACACCAGCTCAGGATCCACGAAGAGGAACACTCTCTCCTGGTAGGGATACAGGGTCAGTAACCTTGTaGAAAAGGCATAGATTCTCT +
Preference number: 2 (lower is better)
Translates to: QTPAQDPRRGTLSPGRDTGSVTL*KRHRFS
Trigger: AGAGAATCTATGCCTTTTGCACAAGGTTACTGACCC...TGTATCCCTACCAGGAGAGAGTGTTCCTCTTCGTGGATCCTGAGCTGGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR GCA 90 bp TGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTTTGGACAAGGTCACCTaGAGCTTCCTGTGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: WIWILFVLKVLVTVEKDFLDKVT*SFLCRA
Trigger: CGCTCTGCACAGGAAGCTGCAGGTGACCTTGTCCAA...AAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CAA 90 bp GATCTTCACCTTCAGTTCAATGAGGAAAATGTCCTCAGTAGGGTCTaGGCTCAGGTCACTGAAAAAGATCTTGACTGTGTAGATCTGGAA +
Preference number: 2 (lower is better)
Translates to: DLHLQFNEENVLSRV*AQVTEKDLDCVDLE
Trigger: TTCCAGATCTACACAGTCAAGATCTTTTTCAGTGACCTGAGCCAAGACCCTACTGAGGACATTTTCCTCATTGAACTGAAGGTGAAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp TCTCTACGTGTCCCTCCCGGCTCGGGCTGGCCTCGCTaGCCATCTGCTCCAAGGCGGCCACCACGGCGTGGA +
Preference number: 3 (lower is better)
Translates to: SLRVPPGSGWPR*PSAPRRPPRRG
Trigger: TCCACGCCGTGGTGGCCGCCTTGGAGCAGATGGCCAGCGAGGCCAGCCCGAGCCGGGAGGGACACGTAGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CCA 72 bp ATCCCCACTGGGCCGGCCTGTCCTCCGGTGCAGCCCTaGGGGCCCGTCCCAGCTGCCAGGCATCAAGAAGTC +
Preference number: 3 (lower is better)
Translates to: IPTGPACPPVQP*GPVPAARHQEV
Trigger: GACTTCTTGATGCCTGGCAGCTGGGACGGGCCCCCAGGGCTGCACCGGAGGACAGGCCGGCCCAGTGGGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 72 bp AAGGTCACCTGCAGCTTCCTGTGCAGAGCGCCTGCGTaGCAGGCCTCCCCCAGAGCCGCCTGCAGGGCGTGG +
Preference number: 3 (lower is better)
Translates to: KVTCSFLCRAPA*QASPRAACRAW
Trigger: CCACGCCCTGCAGGCGGCTCTGGGGGAGGCCTGTCACGCAGGCGCTCTGCACAGGAAGCTGCAGGTGACCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR GCA 72 bp CTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTaGCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAA +
Preference number: 3 (lower is better)
Translates to: LCAAARLAPSQG*RVQAAHQPPWE
Trigger: TTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp CGGCCCAGGAACGTAGCCAGCTCTCCCAGCTCCGGCTaGCTGGATGCTGCAGGCTTCTCAGGCGCCAGCACG +
Preference number: 3 (lower is better)
Translates to: RPRNVASSPSSG*LDAAGFSGAST
Trigger: CGTGCTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGCCGGAGCTGGGAGAGCTGGCTACGTTCCTGGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp GAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTaGAGATCCAAGACCTCCAAGTCAGCACTGAGGCGC +
Preference number: 3 (lower is better)
Translates to: ETRANSRSGRRP*RSKTSKSALRR
Trigger: GCGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp CCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTaGACAGCACAGAAACCCGGGCCAACTCCCGGTCCG +
Preference number: 3 (lower is better)
Translates to: PPWEGPAQCRCQ*TAQKPGPTPGP
Trigger: CGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp CAGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTaGGAAGGTCCCGCTCAATGCCGCTGTCAGTGGACA +
Preference number: 3 (lower is better)
Translates to: QGCRVQAAHQPP*EGPAQCRCQWT
Trigger: TGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CAA 90 bp CACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACGCTTGGTGGCCGCTCTaGGACAAGGTCACCACCGCA +
Preference number: 3 (lower is better)
Translates to: HRNPGQLPVRPEALQIQDAWWPL*DKVTTA
Trigger: TGCGGTGGTGACCTTGTCCAAGAGCGGCCACCAAGC...GTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR GCA 72 bp GAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTaGGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: ETTWRMQVSGVC*AWAASISSSRA
Trigger: TGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp TGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTaGTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGA +
Preference number: 3 (lower is better)
Translates to: WETTWRMQVSGV*CAWAASISSSR
Trigger: TCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp GCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATaGCGCTGTCAGTGGACAGCACAGAAACCCGGGCCA +
Preference number: 3 (lower is better)
Translates to: AAHQPPWEGPAQ*RCQWTAQKPGP
Trigger: TGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp ACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTaGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCAC +
Preference number: 3 (lower is better)
Translates to: TWRMQVSGVCCA*AASISSSRALH
Trigger: GTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CAA 90 bp CGCCCCAGCATCCTGTCATCTCCGAGCACAAGTACCCGGGCTGTGTGCAGCCGGTGGGCAGGGGAATGCTaGGTGGCCGCTCTTGGACAA +
Preference number: 3 (lower is better)
Translates to: RPSILSSPSTSTRAVCSRWAGEC*VAALGQ
Trigger: TTGTCCAAGAGCGGCCACCAAGCATTCCCCTGCCCA...CCGGCTGCACACAGCCCGGGTACTTGTGCTCGGAGATGACAGGATGCTGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 72 bp CAGGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTaGTGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCA +
Preference number: 3 (lower is better)
Translates to: QASRSPGAMHAS*CPLCAAARLAP
Trigger: TGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 72 bp TCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTaGCGTTGCTCTGGTACCACGGGTCTACGCGGCCCA +
Preference number: 3 (lower is better)
Translates to: SQPACGWRGTAC*RCSGTTGLRGP
Trigger: TGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp GCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTaGACACAGACGCAGACACCAGCTCAGGATCCACGA +
Preference number: 3 (lower is better)
Translates to: APGPPRSPVAEH*TQTQTPAQDPR
Trigger: TCGTGGATCCTGAGCTGGTGTCTGCGTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp ATCCTGTCATCTCCGAGCACAAGTACCCGGGCTGTGTaGAGCCGGGACACGCCGGGCAGCATTTCCCCATCC +
Preference number: 3 (lower is better)
Translates to: ILSSPSTSTRAV*SRDTPGSISPS
Trigger: GGATGGGGAAATGCTGCCCGGCGTGTCCCGGCTGCACACAGCCCGGGTACTTGTGCTCGGAGATGACAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp TTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTaGTACCACGGGTCTACGCGGCCCAGGAACGTAGCC +
Preference number: 3 (lower is better)
Translates to: LWMAGHSVLTLL*YHGSTRPRNVA
Trigger: GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CAA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCTGGGCAGGGGAATGCTaGGTGGCCGCTCTTGGACAA +
Preference number: 3 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLWAGEC*VAALGQ
Trigger: TTGTCCAAGAGCGGCCACCAAGCATTCCCCTGCCCA...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 72 bp GGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTaGGGCGCAGCTGGGATCTTGGGCGGAGGAAGAGCA +
Preference number: 3 (lower is better)
Translates to: GGPADPRPPSQH*GAAGILGGGRA
Trigger: TGCTCTTCCTCCGCCCAAGATCCCAGCTGCGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CAA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGCAGGGTCAGTAACCTaGTGCAAAAGGCATAGATTC +
Preference number: 3 (lower is better)
Translates to: AGCRQLISPRGKVPLNAAAGSVT*CKRHRF
Trigger: GAATCTATGCCTTTTGCACAAGGTTACTGACCCTGC...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CAA 90 bp ACCCTGAAACTTCTGTGTCGCTGGCTGGAATGGCCTTCAGGATCAGCCCAGTGGGGCATCTCAGCCAGCTaGTGGATGGCGGGGCACAGC +
Preference number: 3 (lower is better)
Translates to: TLKLLCRWLEWPSGSAQWGISAS*WMAGHS
Trigger: GCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC...CCACTGGGCTGATCCTGAAGGCCATTCCAGCCAGCGACACAGAAGTTTCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp GATGTGTCCAGGGAAGGAGGCATCTCAGCCAGCTTGTaGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: DVSREGGISASL*MAGHSVLTLLW
Trigger: CCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCCTCCTTCCCTGGACACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp GAGCCACGGTGCCTTGGACTTCTGGGCCCCAGAACATaGTTCTGGGCAGGGAGCAACCTCGAATCTGACCAC +
Preference number: 3 (lower is better)
Translates to: EPRCLGLLGPRT*FWAGSNLESDH
Trigger: GTGGTCAGATTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CAA 90 bp GTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGGCAGGGTCAGTAACCTaGTGCAAAAGGCATAGATTC +
Preference number: 3 (lower is better)
Translates to: VQGPCTLLDAPFALQPGSAGSVT*CKRHRF
Trigger: GAATCTATGCCTTTTGCACAAGGTTACTGACCCTGC...CGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR-3UTR CAA 90 bp TCCAGGGAAGGAGGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGGGCAATGACCATCCTTaGGTACAGTGTCCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: SREGGISASLWMAGHSVLGNDHP*VQCPWD
Trigger: GTCCCAGGGACACTGTACCAAAGGATGGTCATTGCC...CAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCCTCCTTCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR GCA 72 bp CCGTTTTCAGCCTTATCGCGCAGTCCAAGGCGACTGTaGAGTAGGGGGTGGGCAGGGTCAGTAACCTTGTGC +
Preference number: 3 (lower is better)
Translates to: PFSALSRSPRRL*SRGWAGSVTLC
Trigger: GCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAGTCGCCTTGGACTGCGCGATAAGGCTGAAAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp GAGCCACGGTGCCTTGGACTTCTGGGCCCCAGAACATaGTTCTGGGCAGGGAGCAACCTCGAATCCAAACAC +
Preference number: 3 (lower is better)
Translates to: EPRCLGLLGPRT*FWAGSNLESKH
Trigger: GTGTTTGGATTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR-3UTR CAA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACGTGATTCCTGTGGCCTaGGTGAGCACGTACATTACA +
Preference number: 3 (lower is better)
Translates to: VCCAWAASISSSRALHTDVIPVA*VSTYIT
Trigger: TGTAATGTACGTGCTCACCAAGGCCACAGGAATCAC...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CAA 90 bp GGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCGGCAATGACCATCCTTaGGTACAGTGTCCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: GIKKSRGHARFLMPPLRCGNDHP*VQCPCK
Trigger: TTTGCAGGGACACTGTACCAAAGGATGGTCATTGCC...GCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR-3UTR CAA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGCACAGCGTGTTGACGTaGCTCTGGTACCACGGGTCT +
Preference number: 3 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLHSVLT*LWYHGS
Trigger: AGACCCGTGGTACCAGAGCAACGTCAACACGCTGTG...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp GGCTTGGCTTTGATTGCTTCCACCTCCTGTTGCCCATaGAAATTGAGCCACGGTGCCTTGGACTTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GLALIASTSCCP*KLSHGALDFWA
Trigger: GGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp TCCAGCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTaGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTC +
Preference number: 3 (lower is better)
Translates to: SSDSVSSLWSRL*IWILFVLKVLV
Trigger: GACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp TTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTaGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LVCMFSSSDSIA*AIRRPPCGPFL
Trigger: GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCTTGAGAACATACACACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR TCA 72 bp GCAACCTCGAATCTGACCACATCCCTGAAAGTGCGTTaGTCGTCCTTGTCCAGCGACAGTGTCAGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: ATSNLTTSLKVR*SSLSSDSVSSL
Trigger: GAGGCTGCTGACACTGTCGCTGGACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR TCA 72 bp ATGCAGAGGCATCTGACCACATCCCTGAAAGTGCGTTaGTCGTCCTTGTCCAGCGACAGTGTCAGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: MQRHLTTSLKVR*SSLSSDSVSSL
Trigger: GAGGCTGCTGACACTGTCGCTGGACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATGCCTCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR GCA 72 bp GGCTTGGGCTTGGCTTTGATTGCTTCCACCTCCTGTTaGCCATGCAAATTGAGCCACGGTGCCTTGGACTTC +
Preference number: 3 (lower is better)
Translates to: GLGLALIASTSC*PCKLSHGALDF
Trigger: GAAGTCCAAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp TTATCGCGCAGTCCAAGGCGACTGTGCAGTAGGGGGTaGGCAGGGTCAGTAACCTTGTGCAAAAGGCATAGA +
Preference number: 3 (lower is better)
Translates to: LSRSPRRLCSRG*AGSVTLCKRHR
Trigger: TCTATGCCTTTTGCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAGTCGCCTTGGACTGCGCGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 72 bp ACATGCCGGAGGTCCTGGCTTTCCGCCTTCTGTTTCTaGCAAGTGATGCGGGTTTTCCATTTGTGGTCGCGT +
Preference number: 3 (lower is better)
Translates to: TCRRSWLSAFCF*QVMRVFHLWSR
Trigger: ACGCGACCACAAATGGAAAACCCGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp ATTCCTGTGGCCTTGGTGAGCACGTACATTACAGTGTaGAGCAAGGGAATGATGACATGCCGGAGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: IPVALVSTYITV*SKGMMTCRRSW
Trigger: CCAGGACCTCCGGCATGTCATCATTCCCTTGCTGCACACTGTAATGTACGTGCTCACCAAGGCCACAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR GCA 72 bp CTGTTCGGCAATGACCATCCTTTGGTACAGTGTCCCTaGAAACCAGACCACTTTGGCCAAACAGCCCCCAAG +
Preference number: 3 (lower is better)
Translates to: LFGNDHPLVQCP*KPDHFGQTAPK
Trigger: CTTGGGGGCTGTTTGGCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CCA 72 bp GACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTaGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTA +
Preference number: 3 (lower is better)
Translates to: DSVSSLWSRLWI*ILFVLKVLVTV
Trigger: TACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR GCA 72 bp CTGTGCAGTAGGGGGTGGGCAGGGTCAGTAACCTTGTaGAAAAGGCATAGATTCTCTGGTAGAGCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: LCSRGWAGSVTL*KRHRFSGRALL
Trigger: CAGAAGAGCTCTACCAGAGAATCTATGCCTTTTGCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CCA 72 bp TCCTTTGGTACAGTGTCCCTGCAAACCAGACCACTTTaGCCAAACAGCCCCCAAGTCTCTGACTCCCATTCT +
Preference number: 3 (lower is better)
Translates to: SFGTVSLQTRPL*PNSPQVSDSHS
Trigger: AGAATGGGAGTCAGAGACTTGGGGGCTGTTTGGCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR TCA 72 bp GGAGGTCCTGGCTTTCCGCCTTCTGTTTCTGACAAGTaGTGCGGGTTTTCCATTTGTGGTCGCGTTATAGTG +
Preference number: 3 (lower is better)
Translates to: GGPGFPPSVSDK*CGFSICGRVIV
Trigger: CACTATAACGCGACCACAAATGGAAAACCCGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR TCA 72 bp AGGGATACAGCTCATTCGTCAAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTGTCCCTGGGACAGCCA +
Preference number: 3 (lower is better)
Translates to: RDTAHSSSSVRQ*PSFGTVSLGQP
Trigger: TGGCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAGCTGTATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CCA 72 bp TCATTCGTCAAGTTCTGTTCGGCAATGACCATCCTTTaGTACAGTGTCCCTGCAAACCAGACCACTTTGGCC +
Preference number: 3 (lower is better)
Translates to: SFVKFCSAMTIL*YSVPANQTTLA
Trigger: GGCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CCA 72 bp TCATTCGTCAAGTTCTGTTCGGCAATGACCATCCTTTaGTACAGTGTCCCTGGGACAGCCATCTCCGTTTTC +
Preference number: 3 (lower is better)
Translates to: SFVKFCSAMTIL*YSVPGTAISVF
Trigger: GAAAACGGAGATGGCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR TCA 72 bp AGGGATACAGCTCATTCGTCAAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTGTCCCTGCAAACCAGA +
Preference number: 3 (lower is better)
Translates to: RDTAHSSSSVRQ*PSFGTVSLQTR
Trigger: TCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAGCTGTATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR TCA 72 bp GAGAGGACAGTGGGAGAAGTGGGAATTGAAGCTAAATaGAGGAGTAGACATTTGTATGAGAAGCTGGGCTTG +
Preference number: 3 (lower is better)
Translates to: ERTVGEVGIEAK*RSRHLYEKLGL
Trigger: CAAGCCCAGCTTCTCATACAAATGTCTACTCCTTCATTTAGCTTCAATTCCCACTTCTCCCACTGTCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR CCA 72 bp AATGAAGGAGTAGACATTTGTATGAGAAGCTGGGCTTaGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCT +
Preference number: 3 (lower is better)
Translates to: NEGVDICMRSWA*CVCSQAATALP
Trigger: AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAAATGTCTACTCCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCCAGGGGCCTGGGTGCTaGGCTCCCGGAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSQGPGC*APGAQP
Trigger: AGGCTGTGCTCCGGGAGCTCAGCACCCAGGCCCCTG...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCTGCAGAGCGCCTGCGTaGCAGGCCTCCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSCRAPA*QASPRA
Trigger: GGCTCTGGGGGAGGCCTGTCACGCAGGCGCTCTGCA...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCAGTACCCGGGCTGTGTaGAGCCGGGACACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSSTRAV*SRDTPG
Trigger: GCCCGGCGTGTCCCGGCTGCACACAGCCCGGGTACT...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp ATGCCGCTGTCAGTGGACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGTACCCGGGCTGTGTaGAGCCGGGACACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: MPLSVDSTETRANSRSGRSTRAV*SRDTPG
Trigger: GCCCGGCGTGTCCCGGCTGCACACAGCCCGGGTACT...CCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCGGAGAGCTCTGCCCCTaGGCCCTCAGCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: DSTETRANSRSGRRPCRSGELCP*ALSHAS
Trigger: AGAGGCGTGGCTGAGGGCCCAGGGGCAGAGCTCTCC...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGCCCGCAGGGAAACGGTaGCCTCTCGGGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VDGGAQRVDVALVPRVYAPAGKR*PLGAGG
Trigger: GCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGG...CGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCTCCCCCAGAGCCGCCTaGAGGGCGTGGGAGACCACG +
Preference number: 4 (lower is better)
Translates to: LLDAPFALQPGSLHLRAASPRAA*RAWETT
Trigger: CGTGGTCTCCCACGCCCTGCAGGCGGCTCTGGGGGA...GGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGAAGTCCAGGGGCCATaGACGCTTCTTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSEVQGP*TLLDAP
Trigger: GGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTC...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGGGAGGGGCCCGTGCCTaGAGAGGGGACTGGATCAGG +
Preference number: 4 (lower is better)
Translates to: PVRPEALQIQDLQVSTEAGGARA*RGDWIR
Trigger: CCTGATCCAGTCCCCTCTGCAGGCACGGGCCCCTCC...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTGCCGCCTGCAGGGCGTaGGAGACCACGTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCAACRA*ETTWRM
Trigger: CATGCGCCACGTGGTCTCCCACGCCCTGCAGGCGGC...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGGGGTGCGGCGAGGGCTaGCCTGCAGCTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VQGPCTLLDAPFALQPGSGCGEG*PAASCA
Trigger: TGCACAGGAAGCTGCAGGCCAGCCCTCGCCGCACCC...CGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp CCTCCCGGCTCGGGCTGGCCTCGCTGGCCATCTGCTCCAAGGCGGCCACCACGGCAATGCCGCTGTCAGTaGACAGCACAGAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: PPGSGWPRWPSAPRRPPRQCRCQ*TAQKPG
Trigger: CCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTG...CCGTGGTGGCCGCCTTGGAGCAGATGGCCAGCGAGGCCAGCCCGAGCCGGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp GTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGGGAGAGCTCTGCCCCTaGGCCCTCAGCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: VQGPCTLLDAPFALQPGSGELCP*ALSHAS
Trigger: AGAGGCGTGGCTGAGGGCCCAGGGGCAGAGCTCTCC...CGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp CACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACAACTCCCCACGGTCCTaGGCGAGGTCCCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HRNPGQLPVRPEALQIQDNSPRS*ARSPVP
Trigger: TGGGACTGGGGACCTCGCTCAGGACCGTGGGGAGTT...GTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGTCCAGCTCCACATCTaGGCTCTCCATGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSVQLHI*ALHGSL
Trigger: AAGGCTCCCATGGAGAGCTCAGATGTGGAGCTGGAC...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATTCCCGGAGCACAGCCTaGACGCTCCTCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DHVAHAGLWCLLRLGRLDSRSTA*TLLWRS
Trigger: GGACCTCCAGAGGAGCGTGCAGGCTGTGCTCCGGGA...ATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGAGTCCAAGGCGACTGTaGAGTAGGGGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGRPRGACRSLVSAAPGSPRRL*SRGWAG
Trigger: CCCTGCCCACCCCCTACTGCACAGTCGCCTTGGACT...CCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAGTCCAAGGCGACTGTaGAGTAGGGGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DSTETRANSRSGRRPCRSSPRRL*SRGWAG
Trigger: CCCTGCCCACCCCCTACTGCACAGTCGCCTTGGACT...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp ATGCCGCTGTCAGTGGACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGGTCTCTGGTGTCTGCTaGGCCTGGGCCGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: MPLSVDSTETRANSRSGRVSGVC*AWAASI
Trigger: GATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGAC...CCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTCAGGTCTCTGGTGTCTaGTGCGCCTGGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCQVSGV*CAWAAS
Trigger: CGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTG...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGTCCCCCAGAGCCGCCTaGAGGGCGTGGGAGACCACG +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLSPRAA*RAWETT
Trigger: CGTGGTCTCCCACGCCCTGCAGGCGGCTCTGGGGGA...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGCGGCGAGGGCTGGCCTaGAGCTTCCTGTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALRRGLA*SFLCRA
Trigger: CGCTCTGCACAGGAAGCTGCAGGCCAGCCCTCGCCG...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TCCTCCAGCCTCTCTACGTGTCCCTCCCGGCTCGGGCTGGCCTCGCTGGCCATCGGCTGGGCAGGGGAATaGTTGGTGGCCGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSSLSTCPSRLGLASLAIGWAGE*LVAALG
Trigger: TCCAAGAGCGGCCACCAAGCATTCCCCTGCCCAGCC...GATGGCCAGCGAGGCCAGCCCGAGCCGGGAGGGACACGTAGAGAGGCTGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR GCA 90 bp CACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACATGCCCCCTTTGCGCTaGAGCCCGGCTCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: HRNPGQLPVRPEALQIQDMPPLR*SPARSI
Trigger: GATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCAT...GTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCGGCTGCCTGGATaGTGCAGGCTTCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: HRNPGQLPVRPEALQIQDLRLPG*CRLLRR
Trigger: GCGCCTGAGAAGCCTGCAGCATCCAGGCAGCCGGAG...GTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CCATCTCAGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGGTCAAGGCCAAAGCTaGCGTGTGGAGCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PSQGCRVQAAHQPPWEGPGQGQS*RVEPGL
Trigger: AAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACC...GGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTGAGATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGTCGGGCTGGCCTCGCTaGCCATCTGCTCCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALSGWPR*PSAPRR
Trigger: CCGCCTTGGAGCAGATGGCCAGCGAGGCCAGCCCGA...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGCCTCCCGGCTCGGGCTaGCCTCGCTGGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: VDGGAQRVDVALVPRVYAPPGSG*PRWPSA
Trigger: AGCAGATGGCCAGCGAGGCCAGCCCGAGCCGGGAGG...CGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp GGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGGCACTGAGGCGCAGCTaGGATCTTGGGCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRGRPRGACRSLVSAAPGALRRS*DLGRRK
Trigger: CTTCCTCCGCCCAAGATCCCAGCTGCGCCTCAGTGC...CCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGAACTCCCCACGGTCCTaGGCGAGGTCCCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALNSPRS*ARSPVP
Trigger: TGGGACTGGGGACCTCGCTCAGGACCGTGGGGAGTT...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTCCCCGTCTTCCTCCCTaGGGTCCAGGAACTCACCTT +
Preference number: 4 (lower is better)
Translates to: AGCRQLISPRGKVPLNAAPRLPP*GPGTHL
Trigger: AAGGTGAGTTCCTGGACCTCAGGGAGGAAGACGGGG...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTCCTCCAAGTCAGCACTaGGGCGCAGCTGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: AGCRQLISPRGKVPLNAAPPSQH*GAAGIL
Trigger: CAAGATCCCAGCTGCGCCTCAGTGCTGACTTGGAGG...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGCCAGGACTGAGCCCCTaGCCAATTGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LDAPFALQPGSLHLRAAGPGLSP*PIGPSL
Trigger: AAGAGAGGGGCCAATTGGGCAGGGGCTCAGTCCTGG...CCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGGCCTCGCTGGCCATCTaGTCCAAGGCGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLASLAI*SKAATT
Trigger: CGTGGTGGCCGCCTTGGAGCAGATGGCCAGCGAGGC...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGGTGCAGCCCGGGCTTGGCTTTGATTaGTTCCACCTCCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: AGQHFPIPTGPACPPVQPGLGFD*FHLLLP
Trigger: GGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCC...GGGCTGCACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCTGCCTGGATGCTGCAGGCTTCTCAGGCGCCAGCACGGGGATGTAGTAGAGCTGCCGCCTGCAGGGCGTaGGAGACCACGTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: AAWMLQASQAPARGCSRAAACRA*ETTWRM
Trigger: CATGCGCCACGTGGTCTCCCACGCCCTGCAGGCGGC...AGCTCTACTACATCCCCGTGCTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGGGGTGCGGCGAGGGCTaGCCTGCAGCTTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLGCGEG*PAASCA
Trigger: TGCACAGGAAGCTGCAGGCCAGCCCTCGCCGCACCC...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGACCTCTCGGGGCCGGTaGCTAAGCAAGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PVRPEALQIQDLQVSTEATSRGR*LSKAFW
Trigger: CCAGAAGGCCTTGCTTAGCCACCGGCCCCGAGAGGT...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCCCCGTCTTCCTCCCTaGGGTCCAGGAACTCACCTT +
Preference number: 4 (lower is better)
Translates to: VQGPCTLLDAPFALQPGSPRLPP*GPGTHL
Trigger: AAGGTGAGTTCCTGGACCTCAGGGAGGAAGACGGGG...CGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTAGGTGTGGAGGCTTTTaGGCTCCCCGGTATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LMPPLRCSPARSISGLPGRCGGF*APRYPG
Trigger: CCCAGGATACCGGGGAGCTCAAAAGCCTCCACACCT...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR TCA 90 bp AGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATTCCACAAGTGGAAGGTaGTGTAGGGGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAAGCRQLISPRGKVPLNSTSGR*CRGWAG
Trigger: CCCTGCCCAGCCCCTACATCACCTTCCACTTGTGGA...ATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp ATCAGCCCAGTGGCCCGCAGGGAAACGGTGACCTCTCGGGGCCGGTGGCTAAGCCCTCCAAGTCAGCACTaGGGCGCAGCTGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: ISPVARRETVTSRGRWLSPPSQH*GAAGIL
Trigger: CAAGATCCCAGCTGCGCCTCAGTGCTGACTTGGAGG...GCTTAGCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGGCCACTGGGCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTACGGGGCACAGCGTGTTaGCGTTGCTCTGGTACCACG +
Preference number: 4 (lower is better)
Translates to: GACRSLVSAAPGPPRSPVRGTAC*RCSGTT
Trigger: CGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCG...TACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp AGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATTCCACATGCCTTGGTTaGTCTGCAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RAAGCRQLISPRGKVPLNSTCLG*SAGQGP
Trigger: AGGCCCCTGCCCTGCAGAGCAACCAAGGCATGTGGA...ATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGAGACCACGTGGCGCATaGAGGTCTCTGGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LDAPFALQPGSLHLRAAGRPRGA*RSLVSA
Trigger: AGCAGACACCAGAGACCTGCATGCGCCACGTGGTCT...CCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTAATAGTGCTCCAGGGTaGGGCGAGGGCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCNSAPG*GEGWPA
Trigger: TGCAGGCCAGCCCTCGCCGCACCCTGGAGCACTATT...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGCGGCTGCCTGGATGCTaGAGGCTTCTCAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLRLPGC*RLLRRQ
Trigger: CTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGCCG...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGTGTGGAGCCGGGCCTTaGTCTGGCTGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PVRPEALQIQDLQVSTEACGAGP*SGCWCE
Trigger: CTCACACCAACAGCCAGAGCAAGGCCCGGCTCCACA...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGAGGGTAGGCTCCCTGTaGTCCCAGGCACTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLRVGSL*SQALAG
Trigger: GCCAGCGAGTGCCTGGGAGCACAGGGAGCCTACCCT...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTGCCTGCACGCTCCTCTaGAGGTCCAGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: LMPPLRCSPARSISGLPGACTLL*RSSSTS
Trigger: AGATGTGGAGCTGGACCTCCAGAGGAGCGTGCAGGC...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGGCCTGCACGCTCCTCTaGAGGTCCAGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLACTLL*RSSSTS
Trigger: AGATGTGGAGCTGGACCTCCAGAGGAGCGTGCAGGC...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTGCTCATCAGCCCCCGTaGGAAGGTCCCGCTCAATGC +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCAHQPP*EGPAQC
Trigger: GCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGC...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCGGAGAGCTCTGCCCCTaGGCCCTCAGCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLGELCP*ALSHAS
Trigger: AGAGGCGTGGCTGAGGGCCCAGGGGCAGAGCTCTCC...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp ACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCACTGGGCCCCAGAACATaGTTCTGGGCAGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: TAQKPGPTPGPAGGPADPLGPRT*FWAGSN
Trigger: GTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAG...TGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGATGGGGAGCTTGGGTaGGAGAGGACAGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: AGCRQLISPRGKVPLNAADGELG*ERTVGE
Trigger: TTCTCCCACTGTCCTCTCCCACCCAAGCTCCCCATC...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CCATCTCAGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCCTTGGTGGCCGCTCTTaGACAAGGTCACCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSQGCRVQAAHQPPWEGPLGGRS*TRSPAA
Trigger: AGCTGCAGGTGACCTTGTCCAAGAGCGGCCACCAAG...GGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTGAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613555.4
3UTR CAA 72 bp AAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTaGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KSRGHARFLMPP*RCSPARSISGL
Trigger: CAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp GCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTaGCTCTGGTACCACGGGTCTACGCGGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ASLWMAGHSVLT*LWYHGSTRPRN
Trigger: GTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCTTCCTGTGGCCTTGGTaGGCACGTACATTACAGTGT +
Preference number: 4 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSFLWPW*ARTLQC
Trigger: ACACTGTAATGTACGTGCTCACCAAGGCCACAGGAA...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR TCA 90 bp CTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTCCCTGAAAGTGCGTTaGTCGTCCTTGTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LDAPFALQPGSLHLRAAGSLKVR*SSLSSD
Trigger: GTCGCTGGACAAGGACGATCAACGCACTTTCAGGGA...CCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTATGCCTTGGTTGCTCTaGAGGGCAGGGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSMPWLL*RAGAWV
Trigger: CACCCAGGCCCCTGCCCTGCAGAGCAACCAAGGCAT...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTATCCACATGCCTTGGTTaGTCTGCAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GACRSLVSAAPGPPRSPVSTCLG*SAGQGP
Trigger: AGGCCCCTGCCCTGCAGAGCAACCAAGGCATGTGGA...TACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGGAAGGTCCCGCTCAATaGCGCTGTCAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VQGPCTLLDAPFALQPGSEGPAQ*RCQWTA
Trigger: TGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTC...CGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATGCCCCCTTTGCGCTaGAGCCCGGCTCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLMPPLR*SPARSI
Trigger: GATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCAT...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTGAAGTCCAGGGGCCATaGACGCTTCTTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCEVQGP*TLLDAP
Trigger: GGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTC...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCAGTACCCGGGCTGTGTaGAGCCGGGACACGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVSTRAV*SRDTPG
Trigger: GCCCGGCGTGTCCCGGCTGCACACAGCCCGGGTACT...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGCTCCGGCTGCCTGGATaGTGCAGGCTTCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GISASLWMAGHSVLTLLWLRLPG*CRLLRR
Trigger: GCGCCTGAGAAGCCTGCAGCATCCAGGCAGCCGGAG...CCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCCTCCGGCTGCCTGGATaGTGCAGGCTTCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLLRLPG*CRLLRR
Trigger: GCGCCTGAGAAGCCTGCAGCATCCAGGCAGCCGGAG...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACTCTCCCAGCTCCGGCTaGCTGGATGCTGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VCCAWAASISSSRALHTDSPSSG*LDAAGF
Trigger: GAAGCCTGCAGCATCCAGGCAGCCGGAGCTGGGAGA...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGTCTCCCAGCTCCGGCTaGCTGGATGCTGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSGVCCAWAASISSSRALSPSSG*LDAAGF
Trigger: GAAGCCTGCAGCATCCAGGCAGCCGGAGCTGGGAGA...CAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCAAATTGAGCCACGGTaGCTTGGACTTCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLQIEPR*LGLLGP
Trigger: GGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTG...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp ACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCATGGGCCTGCTGTCCCTaGAGGCTCACTGGACAATAC +
Preference number: 4 (lower is better)
Translates to: TAQKPGPTPGPAGGPADPWACCP*RLTGQY
Trigger: GTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCA...TGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGGTCAAGGCCAAAGCTaGCGTGTGGAGCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VDGGAQRVDVALVPRVYAGQGQS*RVEPGL
Trigger: AAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACC...CGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGGGTCAAGGCCAAAGCTaGCGTGTGGAGCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLGQGQS*RVEPGL
Trigger: AAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACC...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp AGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCAGGGTAGGCTCCCTGTaGTCCCAGGCACTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVLTLLWYHGSTRPRNVARVGSL*SQALAG
Trigger: GCCAGCGAGTGCCTGGGAGCACAGGGAGCCTACCCT...GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTCACCTCCACATGCCTTaGTTGCTCTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCHLHMP*LLCRAG
Trigger: CCCTGCCCTGCAGAGCAACCAAGGCATGTGGAGGTG...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCGGTGTCTGCTGCGCCTaGGCCGCCTCGATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLGVCCA*AASISS
Trigger: ACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACC...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTGCGTGGGAGACCACGTaGCGCATGCAGGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSAWETT*RMQVSG
Trigger: ACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGC...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCTTTCCCCATCCCCACTaGGCCGGCCTGTCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: SVLTLLWYHGSTRPRNVAFPHPH*AGLSSG
Trigger: ACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAA...GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCAGCTCTCCCAGCTCCGGTGTCGCTGGCTGGAATaGCCTTCAGGATCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVPRVYAAQERSQLSQLRCRWLE*PSGSAQ
Trigger: CTGGGCTGATCCTGAAGGCCATTCCAGCCAGCGACA...CCGGAGCTGGGAGAGCTGGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGTGTCGCTGGCTGGAATaGCCTTCAGGATCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLCRWLE*PSGSAQ
Trigger: CTGGGCTGATCCTGAAGGCCATTCCAGCCAGCGACA...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTCCCAGAACATGGTTCTaGGCAGGGAGCAACCTCGAA +
Preference number: 4 (lower is better)
Translates to: AGCRQLISPRGKVPLNAAPRTWF*AGSNLE
Trigger: TTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGG...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCCTGGGCCCCAGAACATaGTTCTGGGCAGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLDAPFALQPGSLHLRAALGPRT*FWAGSN
Trigger: GTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAG...GGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCGGTGCCTTGGACTTCTaGGCCCCAGAACATGGTTCT +
Preference number: 4 (lower is better)
Translates to: DSTETRANSRSGRRPCRSGALDF*APEHGS
Trigger: AGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACC...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGGTGCCTTGGACTTCTaGGCCCCAGAACATGGTTCT +
Preference number: 4 (lower is better)
Translates to: AGCRQLISPRGKVPLNAAGALDF*APEHGS
Trigger: AGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACC...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CGCTCAATGCCGCTGTCAGTGGACAGCACAGAAACCCGGGCCAACTCCCGGTCCGCACTCGCTGGCTCCTaGTCAAGGCCAAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RSMPLSVDSTETRANSRSALAGS*SRPKLP
Trigger: CGGCAGCTTTGGCCTTGACCAGGAGCCAGCGAGTGC...GGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGAGCGACAGCATTGCCTaGGCCATCCGTAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: PVRPEALQIQDLQVSTEASDSIA*AIRRPP
Trigger: TGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCT...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp ATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTaGACGTTGCTCTGGTACCACGGGTCTACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ISASLWMAGHSV*TLLWYHGSTRP
Trigger: GGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp ACCCAGCAGCGAGCAGTAAATCTCCTCCAGCCTCTCTACGTGTCCCTCCCGGCTTCCCGGAGCACAGCCTaGACGCTCCTCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TQQRAVNLLQPLYVSLPASRSTA*TLLWRS
Trigger: GGACCTCCAGAGGAGCGTGCAGGCTGTGCTCCGGGA...AGCCGGGAGGGACACGTAGAGAGGCTGGAGGAGATTTACTGCTCGCTGCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR GCA 90 bp GCTGCCTGGATGCTGCAGGCTTCTCAGGCGCCAGCACGGGGATGTAGTAGAGCTATGCCTTGGTTGCTCTaGAGGGCAGGGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AAWMLQASQAPARGCSRAMPWLL*RAGAWV
Trigger: CACCCAGGCCCCTGCCCTGCAGAGCAACCAAGGCAT...AGCTCTACTACATCCCCGTGCTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTACGCTCGACCTTCTTGTaGAGGGACCACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: GACRSLVSAAPGPPRSPVRSTFL*RDHLHM
Trigger: CATGTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCG...TACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACCCAGGACTGAGCCCCTaGCCAATTGGCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VCCAWAASISSSRALHTDPGLSP*PIGPSL
Trigger: AAGAGAGGGGCCAATTGGGCAGGGGCTCAGTCCTGG...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTGGGCTTGGCTTTGATTaGTTCCACCTCCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LMPPLRCSPARSISGLPGGLGFD*FHLLLP
Trigger: GGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCC...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCTTGGGAGGGAGGTGGTaGTGTTGCTGTTCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: DSTETRANSRSGRRPCRSLGGRW*CCCSLL
Trigger: AAGCAAGGAACAGCAACAGCACCACCTCCCTCCCAA...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGCTTGGTGGCCGCTCTTaGACAAGGTCACCACCGCAG +
Preference number: 4 (lower is better)
Translates to: VDGGAQRVDVALVPRVYALGGRS*TRSPPQ
Trigger: CTGCGGTGGTGACCTTGTCCAAGAGCGGCCACCAAG...CGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGCTTGGTGGCCGCTCTTaGACAAGGTCACCACCGCAG +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLLGGRS*TRSPPQ
Trigger: CTGCGGTGGTGACCTTGTCCAAGAGCGGCCACCAAG...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTCAATGCCGCTGTCAGTaGACAGCACAGAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCQCRCQ*TAQKPG
Trigger: CCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTG...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGTGTTGACGTTGCTCTaGTACCACGGGTCTACGCGG +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALVLTLL*YHGSTR
Trigger: CCGCGTAGACCCGTGGTACCAGAGCAACGTCAACAC...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp ATCAGCCCAGTGGCCCGCAGGGAAACGGTGACCTCTCGGGGCCGGTGGCTAAGCGCAGGCAGGGGGCAATaGCTAGACCCTGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: ISPVARRETVTSRGRWLSAGRGQ*LDPETS
Trigger: AGAAGTTTCAGGGTCTAGCCATTGCCCCCTGCCTGC...GCTTAGCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGGCCACTGGGCTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CCCAGCATCCTGTCATCTCCGAGCACAAGTACCCGGGCTGTGTGCAGCCGGGACAGTGTCAGCAGCCTCTaGTCCCGGCTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PSILSSPSTSTRAVCSRDSVSSL*SRLWIW
Trigger: CCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACT...GTCCCGGCTGCACACAGCCCGGGTACTTGTGCTCGGAGATGACAGGATGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGGTGCAGCCCGTTGGTGTGAGTGTTTaGAGTTGGTGGGGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: AGQHFPIPTGPACPPVQPVGVSV*SWWGSV
Trigger: TACACTACCCCACCAACTCCAAACACTCACACCAAC...GGGCTGCACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGACATGCCGGAGGTCCTaGCTTTCCGCCTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALTCRRS*LSAFSS
Trigger: ACTGGAGAAGGCGGAAAGCCAGGACCTCCGGCATGT...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619866.5
CDS-3UTR TCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGCAGGGGCCTGGGTGCTaGGCTCCCGGAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLQGPGC*APGAQP
Trigger: AGGCTGTGCTCCGGGAGCTCAGCACCCAGGCCCCTG...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCCTTCTCCAGTTCTCTaGGAAGAATGCGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: DHVAHAGLWCLLRLGRLDPSPVL*EECGPA
Trigger: TGCTGGTCCGCATTCTTCTCAGAGAACTGGAGAAGG...ATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGTGCAGAGCGCCTGCGTaGCAGGCCTCCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLCRAPA*QASPRA
Trigger: GGCTCTGGGGGAGGCCTGTCACGCAGGCGCTCTGCA...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTCCACAAGTGGAAGGTaGTGTAGGGGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GISASLWMAGHSVLTLLWSTSGR*CRGWAG
Trigger: CCCTGCCCAGCCCCTACATCACCTTCCACTTGTGGA...CCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTACCCGCAGGGAAACGGTaGCCTCTCGGGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALPAGKR*PLGAGG
Trigger: GCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGG...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCGTCTCTGGTGTCTGCTaGGCCTGGGCCGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVVSGVC*AWAASI
Trigger: GATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGAC...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAGGCTGGGCAGGGGAATaGTTGGTGGCCGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSGWAGE*LVAALG
Trigger: TCCAAGAGCGGCCACCAAGCATTCCCCTGCCCAGCC...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTAGTTCCTTCCAGAGCTaGTCCTCACCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCSSFQS*SSPVHK
Trigger: CTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACT...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAACCTCCTGTTGCCCATaGAAATTGAGCCACGGTGCC +
Preference number: 4 (lower is better)
Translates to: GACRSLVSAAPGPPRSPVTSCCP*KLSHGA
Trigger: GGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGT...TACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCGGGAGGTGGTGCTGTTaGTGTTCCTTGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: DSTETRANSRSGRRPCRSGRWCC*CSLLPI
Trigger: AATTGGAAGCAAGGAACAGCAACAGCACCACCTCCC...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGCACAGAGGTGGTTCTTaGTTCGGTGGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALHRGGS*FGGSFW
Trigger: CCAGAAGCTGCCACCGAACCAAGAACCACCTCTGTG...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTACACAGAGGTGGTTCTTaGTTCGGTGGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GACRSLVSAAPGPPRSPVHRGGS*FGGSFW
Trigger: CCAGAAGCTGCCACCGAACCAAGAACCACCTCTGTG...TACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCGCCTGCACGCTCCTCTaGAGGTCCAGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLACTLL*RSSSTS
Trigger: AGATGTGGAGCTGGACCTCCAGAGGAGCGTGCAGGC...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCCACCTCCACATGCCTTaGTTGCTCTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLHLHMP*LLCRAG
Trigger: CCCTGCCCTGCAGAGCAACCAAGGCATGTGGAGGTG...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGTTCCTACAGAAGGTGTaGAGGCTTTTGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PVRPEALQIQDLQVSTEAFLQKV*RLLSSP
Trigger: CGGGGAGCTCAAAAGCCTCCACACCTTCTGTAGGAA...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTGCCGCCTGCAGGGCGTaGGAGACCACGTGGCGCATG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAAACRA*ETTWRM
Trigger: CATGCGCCACGTGGTCTCCCACGCCCTGCAGGCGGC...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGCAGGGGAATGCTTGGTaGCCGCTCTTGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLQGNAW*PLLDKV
Trigger: GACCTTGTCCAAGAGCGGCCACCAAGCATTCCCCTG...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTGTGAGGCAGAACTTCTaGGTCTCCCGTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LMPPLRCSPARSISGLPGVRQNF*VSRFLS
Trigger: ACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCAC...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGAGATCTGGAAATAGATaGGTTGGGTGCCCATGCGGA +
Preference number: 4 (lower is better)
Translates to: LDAPFALQPGSLHLRAAGRSGNR*VGCPCG
Trigger: TCCGCATGGGCACCCAACCCATCTATTTCCAGATCT...CCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAACCTCTCGGGGCCGGTaGCTAAGCAAGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSTSRGR*LSKAFW
Trigger: CCAGAAGGCCTTGCTTAGCCACCGGCCCCGAGAGGT...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGGTGCCTTGGACTTCTaGGCCCCAGAACATGGTTCT +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALGALDF*APEHGS
Trigger: AGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACC...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GGCATCTCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGCTCCCAGGCACTCGCTaGCTCCTGGTCAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GISASLWMAGHSVLTLLWLPGTR*LLVKAK
Trigger: TTTGGCCTTGACCAGGAGCCAGCGAGTGCCTGGGAG...CCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGTTTTAAGGGCTGGATaGGGAGCTTGGGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALVLRAG*GAWVGE
Trigger: CTCTCCCACCCAAGCTCCCCATCCAGCCCTTAAAAC...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCTTGGTACAGTGTCCCTaGGACAGCCATCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: DSTETRANSRSGRRPCRSLVQCP*DSHLRF
Trigger: AAAACGGAGATGGCTGTCCCAGGGACACTGTACCAA...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR TCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTACAGGGGCCTGGGTGCTaGGCTCCCGGAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALQGPGC*APGAQP
Trigger: AGGCTGTGCTCCGGGAGCTCAGCACCCAGGCCCCTG...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAGCCATGCACGCTTCTTaGTGCCCCCTTTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSAMHAS*CPLCAA
Trigger: TGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGC...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GATGACATGCCGGAGGTCCTGGCTTTCCGCCTTCTGTTTCTGACAAGTGATGCGCAGGTCTCTGGTGTCTaGTGCGCCTGGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: DDMPEVLAFRLLFLTSDAQVSGV*CAWAAS
Trigger: CGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTG...CGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGCAGGTCTCTGGTGTCTaGTGCGCCTGGGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLQVSGV*CAWAAS
Trigger: CGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTG...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGGAGCAACCTCGAATCTGACCACATCCCTGAAAGTGCGTTGATCGTCCTTGTCTCCCCCAGAGCCGCCTaGAGGGCGTGGGAGACCACG +
Preference number: 4 (lower is better)
Translates to: GSNLESDHIPESALIVLVSPRAA*RAWETT
Trigger: CGTGGTCTCCCACGCCCTGCAGGCGGCTCTGGGGGA...GACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR GCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGGCCTCGCTGGCCATCTaGTCCAAGGCGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLASLAI*SKAATT
Trigger: CGTGGTGGCCGCCTTGGAGCAGATGGCCAGCGAGGC...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR GCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCTCCGGCCGGAGGCCCTaGAGATCCAAGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVSGRRP*RSKTSK
Trigger: CTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGA...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGTTTTCTGCACAGAGGTaGTTCTTGGTTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PVRPEALQIQDLQVSTEAFSAQR*FLVRWQ
Trigger: CTGCCACCGAACCAAGAACCACCTCTGTGCAGAAAA...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGAGGAGGAGGAGGATGTaGTTGTCTCGGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLRRRRM*LSRAAE
Trigger: TTCTGCTGCCCGAGACAACCACATCCTCCTCCTCCT...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGAGCTCCCCGGTATCCTaGGACAGCCATCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLSSPVS*DSHLRF
Trigger: AAAACGGAGATGGCTGTCCCAGGATACCGGGGAGCT...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTCGGGCTGGCCTCGCTaGCCATCTGCTCCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGASGWPR*PSAPRR
Trigger: CCGCCTTGGAGCAGATGGCCAGCGAGGCCAGCCCGA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CTCAGGCGCCAGCACGGGGATGTAGTAGAGCTGCAGGCTGAGTCTGGGAGTGAGCAGGGGAATGCTTGGTaGCCGCTCTTGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LRRQHGDVVELQAESGSEQGNAW*PLLDKV
Trigger: GACCTTGTCCAAGAGCGGCCACCAAGCATTCCCCTG...CTCACTCCCAGACTCAGCCTGCAGCTCTACTACATCCCCGTGCTGGCGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCCAGGGGAATGCTTGGTaGCCGCTCTTGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: SVLTLLWYHGSTRPRNVAQGNAW*PLLDKV
Trigger: GACCTTGTCCAAGAGCGGCCACCAAGCATTCCCCTG...GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAATCTCAGCCAGCTTGTaGATGGCGGGGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSISASL*MAGHSV
Trigger: CACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGAT...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGAAACTTCTGTGTCGCTaGCTGGAATGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLKLLCR*LEWPSG
Trigger: TCCTGAAGGCCATTCCAGCCAGCGACACAGAAGTTT...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGACATTCAGACATGTGTaGTCTGTGACAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRGRPRGACRSLVSAAPGTFRHV*SVTGAA
Trigger: TGCTGCTCCTGTCACAGACCACACATGTCTGAATGT...CCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACTCCCTGCAGGCTCACTaGACAATACCAGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: HRNPGQLPVRPEALQIQDSLQAH*TIPENV
Trigger: CACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGA...GTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCAGCGACAGCATTGCCTaGGCCATCCGTAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLSDSIA*AIRRPP
Trigger: TGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCT...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCGATGGGGAGCTTGGGTaGGAGAGGACAGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLDGELG*ERTVGE
Trigger: TTCTCCCACTGTCCTCTCCCACCCAAGCTCCCCATC...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCCCTGGTTTTAAGGGCTaGATGGGGAGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SVLTLLWYHGSTRPRNVAPGFKG*MGSLGG
Trigger: CCCACCCAAGCTCCCCATCCAGCCCTTAAAACCAGG...GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGAACTCCCCACGGTCCTaGGCGAGGTCCCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLNSPRS*ARSPVP
Trigger: TGGGACTGGGGACCTCGCTCAGGACCGTGGGGAGTT...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACCCTTCTCCAGTTCTCTaGGAAGAATGCGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: VCCAWAASISSSRALHTDPSPVL*EECGPA
Trigger: TGCTGGTCCGCATTCTTCTCAGAGAACTGGAGAAGG...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp AGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: RAAGCRQLISPRGKVPLNSSVRQ*PSFGTV
Trigger: CACTGTACCAAAGGATGGTCATTGCCGAACAGAACT...ATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTCAACCTCTGTCACGTTaGCATTCAGACATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LMPPLRCSPARSISGLPGQPLSR*HSDMCG
Trigger: ACCACACATGTCTGAATGTCAACGTGACAGAGGTTG...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp ACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCACAACCTCTGTCACGTTaGCATTCAGACATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TAQKPGPTPGPAGGPADPQPLSR*HSDMCG
Trigger: ACCACACATGTCTGAATGTCAACGTGACAGAGGTTG...TGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCAGCTCTCCCAGCTCCGGAGAGAACAAGGTGGTTaGTTTTCTGCACAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVPRVYAAQERSQLSQLRREQGG*FSAQRW
Trigger: CCACCTCTGTGCAGAAAAGCAACCACCTTGTTCTCT...CCGGAGCTGGGAGAGCTGGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCTCCACATGCCTTGGTTaGTCTGCAGGGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVSTCLG*SAGQGP
Trigger: AGGCCCCTGCCCTGCAGAGCAACCAAGGCATGTGGA...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTACGGCGAGGGCTGGCCTaGAGCTTCCTGTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALRRGLA*SFLCRA
Trigger: CGCTCTGCACAGGAAGCTGCAGGCCAGCCCTCGCCG...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR GCA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGATGCCCCCTTTGCGCTaGAGCCCGGCTCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLMPPLR*SPARSI
Trigger: GATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCAT...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCGAAGTCCAGGGGCCATaGACGCTTCTTGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: ATVSAASGPGSGSGYCSSEVQGP*TLLDAP
Trigger: GGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTC...GGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCAATAGATGGGTTGGGTaGCCATGCGGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLDAPFALQPGSLHLRAANRWVG*PCGCSR
Trigger: CCTACTACATCCGCATGGGCACCCAACCCATCTATT...GGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTAGGGTAGGCTCCCTGTaGTCCCAGGCACTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGARVGSL*SQALAG
Trigger: GCCAGCGAGTGCCTGGGAGCACAGGGAGCCTACCCT...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CTCAGGCGCCAGCACGGGGATGTAGTAGAGCTGCAGGCTGAGTCTGGGAGTGAGTTGGACAAGGTCACCTaGAGCTTCCTGTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LRRQHGDVVELQAESGSELDKVT*SFLCRA
Trigger: CGCTCTGCACAGGAAGCTGCAGGTGACCTTGTCCAA...CTCACTCCCAGACTCAGCCTGCAGCTCTACTACATCCCCGTGCTGGCGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACTGTGCAGTAGGGGGTaGGCAGGGTCAGTAACCTTG +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSLCSRG*AGSVTL
Trigger: CAAGGTTACTGACCCTGCCCACCCCCTACTGCACAG...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTTTCCCCATCCCCACTaGGCCGGCCTGTCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAFPHPH*AGLSSG
Trigger: ACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAGTGTTGACGTTGCTCTaGTACCACGGGTCTACGCGG +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSVLTLL*YHGSTR
Trigger: CCGCGTAGACCCGTGGTACCAGAGCAACGTCAACAC...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCATCTCAGCCAGCTTGTaGATGGCGGGGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SEAELLGLPFPESVVGLGISASL*MAGHSV
Trigger: CACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGAT...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp ATGACGTCTAGGATGAAGGGGTCCACAGTCCGGGATGTGTCCAGGGAAGGAGGCAGTGTCAGCAGCCTCTaGTCCCGGCTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: MTSRMKGSTVRDVSREGGSVSSL*SRLWIW
Trigger: CCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACT...GCCTCCTTCCCTGGACACATCCCGGACTGTGGACCCCTTCATCCTAGACGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGGTCCCGCTCAATGCCGCTGTCAGTGGACAGCACAGAAACCCGGGCCAACTCCCCCAGAACATGGTTCTaGGCAGGGAGCAACCTCGAA +
Preference number: 4 (lower is better)
Translates to: RSRSMPLSVDSTETRANSPRTWF*AGSNLE
Trigger: TTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGG...GGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGAGTGTTTGGAGTTGGTaGGGTAGTGTATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLSVWSW*GSVSFL
Trigger: GAGGAAGGATACACTACCCCACCAACTCCAAACACT...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp ACCCTGAAACTTCTGTGTCGCTGGCTGGAATGGCCTTCAGGATCAGCCCAGTGGGCACTCGCTGGCTCCTaGTCAAGGCCAAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TLKLLCRWLEWPSGSAQWALAGS*SRPKLP
Trigger: CGGCAGCTTTGGCCTTGACCAGGAGCCAGCGAGTGC...CCACTGGGCTGATCCTGAAGGCCATTCCAGCCAGCGACACAGAAGTTTCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCATGAGAAGCTGGGCTTaGTGTGTATGTTCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: DSTETRANSRSGRRPCRSMRSWA*CVCSQA
Trigger: TGCTTGAGAACATACACACCAAGCCCAGCTTCTCAT...GGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACCTGGTTTTAAGGGCTaGATGGGGAGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSPGFKG*MGSLGG
Trigger: CCCACCCAAGCTCCCCATCCAGCCCTTAAAACCAGG...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GCTGCCTGGATGCTGCAGGCTTCTCAGGCGCCAGCACGGGGATGTAGTAGAGCTGACTTGGGAGGGAGGTaGTGCTGTTGCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: AAWMLQASQAPARGCSRADLGGR*CCCCSL
Trigger: CAAGGAACAGCAACAGCACCACCTCCCTCCCAAGTC...AGCTCTACTACATCCCCGTGCTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGACAGGTCAGCCTGTGTaGGAGGGGCCCGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLTGQPV*EGPVPA
Trigger: TGCAGGCACGGGCCCCTCCCACACAGGCTGACCTGT...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR TCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTGGGTCTCCCGTTTCCTaGGTCTGTGGTAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAGSPVS*VCGRPG
Trigger: CCCAGGCCTACCACAGACTCAGGAAACGGGAGACCC...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGGGGTCTCCCGTTTCCTaGGTCTGTGGTAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLGSPVS*VCGRPG
Trigger: CCCAGGCCTACCACAGACTCAGGAAACGGGAGACCC...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GATCTTGACTGTGTAGATCTGGAAATAGATGGGTTGGGTGCCCATGCGGATGTACCCGCAGGGAAACGGTaGCCTCTCGGGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: DLDCVDLEIDGLGAHADVPAGKR*PLGAGG
Trigger: GCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGG...TACATCCGCATGGGCACCCAACCCATCTATTTCCAGATCTACACAGTCAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGCAACCTCTGTCACGTTaGCATTCAGACATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALQPLSR*HSDMCG
Trigger: ACCACACATGTCTGAATGTCAACGTGACAGAGGTTG...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp TCAGCCAGCTTGTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACCTCTGGCTGTTGGTGTaGGTGTTTGGAGTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SASLWMAGHSVLTLLWYHLWLLV*VFGVGG
Trigger: CCCACCAACTCCAAACACTCACACCAACAGCCAGAG...GTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCACAAGCTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACTCTGGCTGTTGGTGTaGGTGTTTGGAGTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSLWLLV*VFGVGG
Trigger: CCCACCAACTCCAAACACTCACACCAACAGCCAGAG...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGATGCCTTGGTTGCTCTaGAGGGCAGGGGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLMPWLL*RAGAWV
Trigger: CACCCAGGCCCCTGCCCTGCAGAGCAACCAAGGCAT...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCCGCTCGACCTTCTTGTaGAGGGACCACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVRSTFL*RDHLHM
Trigger: CATGTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCG...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CCAGTGGCCCGCAGGGAAACGGTGACCTCTCGGGGCCGGTGGCTAAGCAAGGCCGGGTCAGTAACCTTGTaGAAAAGGCATAGATTCTCT +
Preference number: 4 (lower is better)
Translates to: PVARRETVTSRGRWLSKAGSVTL*KRHRFS
Trigger: AGAGAATCTATGCCTTTTGCACAAGGTTACTGACCC...GGCCTTGCTTAGCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGGCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCCCAGTAGCAGAGCACTaGACACAGACGCAGACACCA +
Preference number: 4 (lower is better)
Translates to: GIKKSRGHARFLMPPLRCPVAEH*TQTQTP
Trigger: TGGTGTCTGCGTCTGTGTGCAGTGCTCTGCTACTGG...GCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGTTCCTTCCAGAGCTaGTCCTCACCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: GIKKSRGHARFLMPPLRCSSFQS*SSPVHK
Trigger: CTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACT...GCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTCCGGCCGGAGGCCCTaGAGATCCAAGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGASGRRP*RSKTSK
Trigger: CTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp ATGACGTCTAGGATGAAGGGGTCCACAGTCCGGGATGTGTCCAGGGAAGGAGGCGAAGGTCCCGCTCAATaGCGCTGTCAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: MTSRMKGSTVRDVSREGGEGPAQ*RCQWTA
Trigger: TGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTC...GCCTCCTTCCCTGGACACATCCCGGACTGTGGACCCCTTCATCCTAGACGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGTCTCCCAGCTCCGGCTaGCTGGATGCTGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLSPSSG*LDAAGF
Trigger: GAAGCCTGCAGCATCCAGGCAGCCGGAGCTGGGAGA...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGGGCCTGCTGTCCCTaGAGGCTCACTGGACAATAC +
Preference number: 4 (lower is better)
Translates to: ATVSAASGPGSGSGYCSSWACCP*RLTGQY
Trigger: GTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCA...GGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCTTGGGAGGGAGGTGGTaGTGTTGCTGTTCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLLGGRW*CCCSLL
Trigger: AAGCAAGGAACAGCAACAGCACCACCTCCCTCCCAA...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAGGTGTCTGCTGCGCCTaGGCCGCCTCGATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALGVCCA*AASISS
Trigger: ACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACC...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CCTGGGCCTGCTGTCCCTGCAGGCTCACTGGACAATACCAGAGAATGTGTTGATGCGTGGGAGACCACGTaGCGCATGCAGGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGPAVPAGSLDNTRECVDAWETT*RMQVSG
Trigger: ACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGC...ATCAACACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGGCGTGGGAGACCACGTaGCGCATGCAGGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLAWETT*RMQVSG
Trigger: ACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGC...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCCCTCCCGGCTCGGGCTaGCCTCGCTGGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAPPGSG*PRWPSA
Trigger: AGCAGATGGCCAGCGAGGCCAGCCCGAGCCGGGAGG...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GATGACATGCCGGAGGTCCTGGCTTTCCGCCTTCTGTTTCTGACAAGTGATGCGGCACTGAGGCGCAGCTaGGATCTTGGGCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DDMPEVLAFRLLFLTSDAALRRS*DLGRRK
Trigger: CTTCCTCCGCCCAAGATCCCAGCTGCGCCTCAGTGC...CGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGGCACTGAGGCGCAGCTaGGATCTTGGGCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLALRRS*DLGRRK
Trigger: CTTCCTCCGCCCAAGATCCCAGCTGCGCCTCAGTGC...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCCAATGCCGCTGTCAGTaGACAGCACAGAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVQCRCQ*TAQKPG
Trigger: CCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTG...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GATGACATGCCGGAGGTCCTGGCTTTCCGCCTTCTGTTTCTGACAAGTGATGCGGCTCATCAGCCCCCGTaGGAAGGTCCCGCTCAATGC +
Preference number: 4 (lower is better)
Translates to: DDMPEVLAFRLLFLTSDAAHQPP*EGPAQC
Trigger: GCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGC...CGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTATTTCCCCATCCCCACTaGGCCGGCCTGTCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALFPHPH*AGLSSG
Trigger: ACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAA...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCGTGTTGACGTTGCTCTaGTACCACGGGTCTACGCGG +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVVLTLL*YHGSTR
Trigger: CCGCGTAGACCCGTGGTACCAGAGCAACGTCAACAC...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTTCCCGGCTCTGGATCTaGATATTGTTCGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSSRLWI*ILFVLK
Trigger: CTTCAGGACGAACAATATCCAGATCCAGAGCCGGGA...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCCTCTGGTCCCGGCTCTaGATCTGGATATTGTTCGTC +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLLWSRL*IWILFV
Trigger: GACGAACAATATCCAGATCCAGAGCCGGGACCAGAG...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTCCACAAGTGGAAGGTaGTGTAGGGGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGASTSGR*CRGWAG
Trigger: CCCTGCCCAGCCCCTACATCACCTTCCACTTGTGGA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTGCCATGCACGCTTCTTaGTGCCCCCTTTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGAMHAS*CPLCAA
Trigger: TGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGC...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGGCCATGCACGCTTCTTaGTGCCCCCTTTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLAMHAS*CPLCAA
Trigger: TGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGC...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp ATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTGGACAGCACAGATACCAGAGAATGTGTTaGTGGGCATCAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ISPRGKVPLNAAVSGQHRYQRMC*WASEGA
Trigger: AGCCCCTTCTGATGCCCATCAACACATTCTCTGGTA...TCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCCTCTGGCTGTTGGTGTaGGTGTTTGGAGTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVLWLLV*VFGVGG
Trigger: CCCACCAACTCCAAACACTCACACCAACAGCCAGAG...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGGCTGGGCAGGGGAATaGTTGGTGGCCGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LWSRLWIWILFVLKVLVTGWAGE*LVAALG
Trigger: TCCAAGAGCGGCCACCAAGCATTCCCCTGCCCAGCC...AGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGTGGAGCCGGGCCTTaGTCTGGCTGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGACGAGP*SGCWCE
Trigger: CTCACACCAACAGCCAGAGCAAGGCCCGGCTCCACA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AAGAGCACCAGTTCCTTCCAGAGCTGCTCCTCACCGGTCCACAAGTGGAAGGTGGAGAAGCAGATGTCTTaGGGGAGCCTCCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: KSTSSFQSCSSPVHKWKVEKQMS*GSLHGC
Trigger: ACACCCGTGGAGGCTCCCCCAAGACATCTGCTTCTC...CACCTTCCACTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACTGGTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCACATGCCGGAGGTCCTaGCTTTCCGCCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ATVSAASGPGSGSGYCSSTCRRS*LSAFCF
Trigger: GAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGT...GGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AAGAGCACCAGTTCCTTCCAGAGCTGCTCCTCACCGGTCCACAAGTGGAAGGTGCTGTGCAGTAGGGGGTaGGCAGGGTCAGTAACCTTG +
Preference number: 4 (lower is better)
Translates to: KSTSSFQSCSSPVHKWKVLCSRG*AGSVTL
Trigger: CAAGGTTACTGACCCTGCCCACCCCCTACTGCACAG...CACCTTCCACTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACTGGTGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGCCCAGGAACGTAGCCAGATCTGGAAATAGATaGGTTGGGTGCCCATGCGGA +
Preference number: 4 (lower is better)
Translates to: SVLTLLWYHGSTRPRNVARSGNR*VGCPCG
Trigger: TCCGCATGGGCACCCAACCCATCTATTTCCAGATCT...GGCTACGTTCCTGGGCCGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCGCAGGCAGGGGGCAATaGCTAGACCCTGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVAGRGQ*LDPETS
Trigger: AGAAGTTTCAGGGTCTAGCCATTGCCCCCTGCCTGC...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACACATTCAGACATGTGTaGTCTGTGACAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VCCAWAASISSSRALHTDTFRHV*SVTGAA
Trigger: TGCTGCTCCTGTCACAGACCACACATGTCTGAATGT...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGAGTGTCAGCAGCCTCTaGTCCCGGCTCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLSVSSL*SRLWIW
Trigger: CCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACT...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGCTGGGCCCCAGAACATaGTTCTGGGCAGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLLGPRT*FWAGSN
Trigger: GTTGCTCCCTGCCCAGAACCATGTTCTGGGGCCCAG...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGAGTGTTTGGAGTTGGTaGGGTAGTGTATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLSVWSW*GSVSFL
Trigger: GAGGAAGGATACACTACCCCACCAACTCCAAACACT...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGGTTGGTGTGAGTGTTTaGAGTTGGTGGGGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: VDGGAQRVDVALVPRVYAVGVSV*SWWGSV
Trigger: TACACTACCCCACCAACTCCAAACACTCACACCAAC...CGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTATGAGAAGCTGGGCTTaGTGTGTATGTTCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCMRSWA*CVCSQA
Trigger: TGCTTGAGAACATACACACCAAGCCCAGCTTCTCAT...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCTTGGTACAGTGTCCCTaGGACAGCCATCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLLVQCP*DSHLRF
Trigger: AAAACGGAGATGGCTGTCCCAGGGACACTGTACCAA...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613555.4
ENST00000619866.5
3UTR CAA 72 bp ACCTCCTGTTGCCCATGCAAATTGAGCCACGGTGCCTaGGACTTCTGGGCCCCAGAACATGGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSCCPCKLSHGA*DFWAPEHGSGQ
Trigger: CTGCCCAGAACCATGTTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp TGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATaGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: WAWCVCSQAATA*PGPSVDLHVGP
Trigger: AGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTCAGCCCCCAAGTCTCTaGCTCCCATTCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGQPPSL*LPFSTF
Trigger: GAAGGTGGAGAATGGGAGTCAGAGACTTGGGGGCTG...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR GCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGTCTCTGGTGTCTGCTaGGCCTGGGCCGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAVSGVC*AWAASI
Trigger: GATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGAC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp AAGAGCACCAGTTCCTTCCAGAGCTGCTCCTCACCGGTCCACAAGTGGAAGGTGAGTTCCTTCCAGAGCTaGTCCTCACCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: KSTSSFQSCSSPVHKWKVSSFQS*SSPVHK
Trigger: CTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACT...CACCTTCCACTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACTGGTGCTCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGGAAGGTCCCGCTCAATaGCGCTGTCAGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLEGPAQ*RCQWTA
Trigger: TGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTC...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGCAAATTGAGCCACGGTaGCTTGGACTTCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLQIEPR*LGLLGP
Trigger: GGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTG...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGTGGGCCTGCTGTCCCTaGAGGCTCACTGGACAATAC +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLWACCP*RLTGQY
Trigger: GTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCA...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAGGGAGGTGGTGCTGTTaGTGTTCCTTGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSGRWCC*CSLLPI
Trigger: AATTGGAAGCAAGGAACAGCAACAGCACCACCTCCC...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGGAGAAGCAGATGTCTTaGGGGAGCCTCCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLEKQMS*GSLHGC
Trigger: ACACCCGTGGAGGCTCCCCCAAGACATCTGCTTCTC...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GATGACATGCCGGAGGTCCTGGCTTTCCGCCTTCTGTTTCTGACAAGTGATGCGAATGCGGACCAGCACTaGGCTCTTACCGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: DDMPEVLAFRLLFLTSDANADQH*ALTGIS
Trigger: CGAGATCCCGGTAAGAGCCCAGTGCTGGTCCGCATT...CGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTAATGCGGACCAGCACTaGGCTCTTACCGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGNADQH*ALTGIS
Trigger: CGAGATCCCGGTAAGAGCCCAGTGCTGGTCCGCATT...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCCAAACCAGACCACTTTaGCCAAACAGCCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SEAELLGLPFPESVVGLGQTRPL*PNSPQV
Trigger: GACTTGGGGGCTGTTTGGCCAAAGTGGTCTGGTTTG...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGGTGTCTGCTGCGCCTaGGCCGCCTCGATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAGVCCA*AASISS
Trigger: ACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAAAACTTCTGTGTCGCTaGCTGGAATGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSKLLCR*LEWPSG
Trigger: TCCTGAAGGCCATTCCAGCCAGCGACACAGAAGTTT...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GGGAGCAACCTCGAATCTGACCACATCCCTGAAAGTGCGTTGATCGTCCTTGTCGTGTATCCTTCCTCCTaGGCCTGCTGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSNLESDHIPESALIVLVVYPSS*ACCPCR
Trigger: CCTGCAGGGACAGCAGGCCCAGGAGGAAGGATACAC...GACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp ATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTGGACAGCACAGAGTGAGTGTTTGGAGTTaGTGGGGTAGTGTATCCTTC +
Preference number: 4 (lower is better)
Translates to: ISPRGKVPLNAAVSGQHRVSVWS*WGSVSF
Trigger: GAAGGATACACTACCCCACCAACTCCAAACACTCAC...TCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCGTGAGTGTTTGGAGTTaGTGGGGTAGTGTATCCTTC +
Preference number: 4 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLVSVWS*WGSVSF
Trigger: GAAGGATACACTACCCCACCAACTCCAAACACTCAC...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGAGCGACAGCATTGCCTaGGCCATCCGTAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLSDSIA*AIRRPP
Trigger: TGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCT...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTATTTGTATGAGAAGCTaGGCTTGGTGTGTATGTTCT +
Preference number: 4 (lower is better)
Translates to: LMPPLRCSPARSISGLPGICMRS*AWCVCS
Trigger: AGAACATACACACCAAGCCCAGCTTCTCATACAAAT...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAGTCCAGCTCCACATCTaGGCTCTCCATGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALVQLHI*ALHGSL
Trigger: AAGGCTCCCATGGAGAGCTCAGATGTGGAGCTGGAC...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTCGGGGCACAGCGTGTTaGCGTTGCTCTGGTACCACG +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPRGTAC*RCSGTT
Trigger: CGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCG...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTCCCTGAAAGTGCGTTaGTCGTCCTTGTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGASLKVR*SSLSSD
Trigger: GTCGCTGGACAAGGACGATCAACGCACTTTCAGGGA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp ACCCTGAAACTTCTGTGTCGCTGGCTGGAATGGCCTTCAGGATCAGCCCAGTGGAAGGGAATGATGACATaGCGGAGGTCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TLKLLCRWLEWPSGSAQWKGMMT*RRSWLS
Trigger: GGAAAGCCAGGACCTCCGGCATGTCATCATTCCCTT...CCACTGGGCTGATCCTGAAGGCCATTCCAGCCAGCGACACAGAAGTTTCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTAGTCCAAGGCGACTGTaGAGTAGGGGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPSPRRL*SRGWAG
Trigger: CCCTGCCCACCCCCTACTGCACAGTCGCCTTGGACT...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTCCAGTAGCAGAGCACTaGACACAGACGCAGACACCA +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAPVAEH*TQTQTP
Trigger: TGGTGTCTGCGTCTGTGTGCAGTGCTCTGCTACTGG...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GATCCACGAAGAGGAACACTCTCTCCTGGTAGGGATACAGCTCATTCGTCAAGTAATAGTGCTCCAGGGTaGGGCGAGGGCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: DPRRGTLSPGRDTAHSSSNSAPG*GEGWPA
Trigger: TGCAGGCCAGCCCTCGCCGCACCCTGGAGCACTATT...ACTTGACGAATGAGCTGTATCCCTACCAGGAGAGAGTGTTCCTCTTCGTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR GCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTACAAATTGAGCCACGGTaGCTTGGACTTCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALQIEPR*LGLLGP
Trigger: GGGGCCCAGAAGTCCAAGGCACCGTGGCTCAATTTG...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CCTGGGCCTGCTGTCCCTGCAGGCTCACTGGACAATACCAGAGAATGTGTTGATACCTCCTGTTGCCCATaGAAATTGAGCCACGGTGCC +
Preference number: 4 (lower is better)
Translates to: PGPAVPAGSLDNTRECVDTSCCP*KLSHGA
Trigger: GGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGT...ATCAACACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGACCTCCTGTTGCCCATaGAAATTGAGCCACGGTGCC +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLTSCCP*KLSHGA
Trigger: GGCACCGTGGCTCAATTTGCATGGGCAACAGGAGGT...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGAGGAGGAGGAGGATGTaGTTGTCTCGGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLRRRRM*LSRAAE
Trigger: TTCTGCTGCCCGAGACAACCACATCCTCCTCCTCCT...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAAATGCGGACCAGCACTaGGCTCTTACCGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALNADQH*ALTGIS
Trigger: CGAGATCCCGGTAAGAGCCCAGTGCTGGTCCGCATT...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTGCTCATCAGCCCCCGTaGGAAGGTCCCGCTCAATGC +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPAHQPP*EGPAQC
Trigger: GCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGC...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCAAACTTCTGTGTCGCTaGCTGGAATGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SEAELLGLPFPESVVGLGKLLCR*LEWPSG
Trigger: TCCTGAAGGCCATTCCAGCCAGCGACACAGAAGTTT...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTCCCAGAACATGGTTCTaGGCAGGGAGCAACCTCGAA +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGPRTWF*AGSNLE
Trigger: TTCGAGGTTGCTCCCTGCCCAGAACCATGTTCTGGG...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCTCCCTGCAGGCTCACTaGACAATACCAGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVSLQAH*TIPENV
Trigger: CACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGA...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGCACTCGCTGGCTCCTaGTCAAGGCCAAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAALAGS*SRPKLP
Trigger: CGGCAGCTTTGGCCTTGACCAGGAGCCAGCGAGTGC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CCTGGGCCTGCTGTCCCTGCAGGCTCACTGGACAATACCAGAGAATGTGTTGATGTTTTAAGGGCTGGATaGGGAGCTTGGGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGPAVPAGSLDNTRECVDVLRAG*GAWVGE
Trigger: CTCTCCCACCCAAGCTCCCCATCCAGCCCTTAAAAC...ATCAACACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTGTTTTAAGGGCTGGATaGGGAGCTTGGGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGVLRAG*GAWVGE
Trigger: CTCTCCCACCCAAGCTCCCCATCCAGCCCTTAAAAC...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGGACTTGGGAGGGAGGTaGTGCTGTTGCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLDLGGR*CCCCSL
Trigger: CAAGGAACAGCAACAGCACCACCTCCCTCCCAAGTC...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGCCTGCAGAGGGGACTaGATCAGGAGGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAACRGD*IRRLQA
Trigger: AGCCTGCAGCCTCCTGATCCAGTCCCCTCTGCAGGC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR TCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGCCTTCTCCAGTTCTCTaGGAAGAATGCGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLPSPVL*EECGPA
Trigger: TGCTGGTCCGCATTCTTCTCAGAGAACTGGAGAAGG...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTCCTCCAAGTCAGCACTaGGGCGCAGCTGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPPPSQH*GAAGIL
Trigger: CAAGATCCCAGCTGCGCCTCAGTGCTGACTTGGAGG...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp GATTCTCTGGTAGAGCTCTTCTGTGATTCCTGTGGCATTACAGTGTGCAGCAAGGGGTCTCCCGTTTCCTaGGTCTGTGGTAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DSLVELFCDSCGITVCSKGSPVS*VCGRPG
Trigger: CCCAGGCCTACCACAGACTCAGGAAACGGGAGACCC...CTTGCTGCACACTGTAATGCCACAGGAATCACAGAAGAGCTCTACCAGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR GCA 90 bp CCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCAAGTTGGAGGACTTAGACCACGTGGCGCATaGAGGTCTCTGGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PEGVGHCREGLSRQVGGLRPRGA*RSLVSA
Trigger: AGCAGACACCAGAGACCTGCATGCGCCACGTGGTCT...AAGTCCTCCAACTTGGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAGGGCTTGGCTTTGATTaGTTCCACCTCCTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALGLGFD*FHLLLP
Trigger: GGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCC...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTACTGGATCAGGAGGCTaGAGGCTGAGTGTATGCAGA +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGATGSGG*RLSVCR
Trigger: TCTGCATACACTCAGCCTGCAGCCTCCTGATCCAGT...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp CGACTGTGCAGTAGGGGGTGGGCAGGGTCAGTAACCTTGTGCAAAAGGCATAGACATCTGAGCTCTCCATaGGAGCCTTTGGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RLCSRGWAGSVTLCKRHRHLSSP*EPLGVG
Trigger: TCCTACACCCAAAGGCTCCCATGGAGAGCTCAGATG...TCTATGCCTTTTGCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTCATCTGAGCTCTCCATaGGAGCCTTTGGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAHLSSP*EPLGVG
Trigger: TCCTACACCCAAAGGCTCCCATGGAGAGCTCAGATG...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GATCCACGAAGAGGAACACTCTCTCCTGGTAGGGATACAGCTCATTCGTCAAGTCACCTCCACATGCCTTaGTTGCTCTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DPRRGTLSPGRDTAHSSSHLHMP*LLCRAG
Trigger: CCCTGCCCTGCAGAGCAACCAAGGCATGTGGAGGTG...ACTTGACGAATGAGCTGTATCCCTACCAGGAGAGAGTGTTCCTCTTCGTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp CGTCAAGTTCTGTTCGGCAATGACCATCCTTTGGTACAGTGTCCCTGGGACAGCACATGCCGGAGGTCCTaGCTTTCCGCCTTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RQVLFGNDHPLVQCPWDSTCRRS*LSAFCF
Trigger: GAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGT...GCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCGCAATGACCATCCTTTaGTACAGTGTCCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SEAELLGLPFPESVVGLGAMTIL*YSVPAN
Trigger: GTTTGCAGGGACACTGTACCAAAGGATGGTCATTGC...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp GATCCACGAAGAGGAACACTCTCTCCTGGTAGGGATACAGCTCATTCGTCAAGTATCTCAGCCAGCTTGTaGATGGCGGGGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: DPRRGTLSPGRDTAHSSSISASL*MAGHSV
Trigger: CACGCTGTGCCCCGCCATCCACAAGCTGGCTGAGAT...ACTTGACGAATGAGCTGTATCCCTACCAGGAGAGAGTGTTCCTCTTCGTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GATTCTCTGGTAGAGCTCTTCTGTGATTCCTGTGGCATTACAGTGTGCAGCAAGACCTCTCGGGGCCGGTaGCTAAGCAAGGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DSLVELFCDSCGITVCSKTSRGR*LSKAFW
Trigger: CCAGAAGGCCTTGCTTAGCCACCGGCCCCGAGAGGT...CTTGCTGCACACTGTAATGCCACAGGAATCACAGAAGAGCTCTACCAGAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp CGACTGTGCAGTAGGGGGTGGGCAGGGTCAGTAACCTTGTGCAAAAGGCATAGATTCTGTGTCGCTGGCTaGAATGGCCTTCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: RLCSRGWAGSVTLCKRHRFCVAG*NGLQDQ
Trigger: CTGATCCTGAAGGCCATTCCAGCCAGCGACACAGAA...TCTATGCCTTTTGCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTCTCTGGTCCCGGCTCTaGATCTGGATATTGTTCGTC +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGALWSRL*IWILFV
Trigger: GACGAACAATATCCAGATCCAGAGCCGGGACCAGAG...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTGTGTATCCTTCCTCCTaGGCCTGCTGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPVYPSS*ACCPCR
Trigger: CCTGCAGGGACAGCAGGCCCAGGAGGAAGGATACAC...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTCTCCCAGGCACTCGCTaGCTCCTGGTCAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPLPGTR*LLVKAK
Trigger: TTTGGCCTTGACCAGGAGCCAGCGAGTGCCTGGGAG...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGACTTGGGAGGGAGGTaGTGCTGTTGCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LWSRLWIWILFVLKVLVTDLGGR*CCCCSL
Trigger: CAAGGAACAGCAACAGCACCACCTCCCTCCCAAGTC...AGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp GTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATaGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VSSLWSRLWIWI*FVLKVLVTVEK
Trigger: CTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp AGCAACCTCGAATCTGACCACATCCCTGAAAGTGCGTaGATCGTCCTTGTCCAGCGACAGTGTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SNLESDHIPESA*IVLVQRQCQQP
Trigger: AGGCTGCTGACACTGTCGCTGGACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CAA 72 bp TATGCAGAGGCATCTGACCACATCCCTGAAAGTGCGTaGATCGTCCTTGTCCAGCGACAGTGTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YAEASDHIPESA*IVLVQRQCQQP
Trigger: AGGCTGCTGACACTGTCGCTGGACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATGCCTCTGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR TCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTTTCCTGTGGCCTTGGTaGGCACGTACATTACAGTGT +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGFLWPW*ARTLQC
Trigger: ACACTGTAATGTACGTGCTCACCAAGGCCACAGGAA...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTCGCTCGACCTTCTTGTaGAGGGACCACCTCCACATG +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPRSTFL*RDHLHM
Trigger: CATGTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCG...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCAGACCACGTGGCGCATaGAGGTCTCTGGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIARPRGA*RSLVSA
Trigger: AGCAGACACCAGAGACCTGCATGCGCCACGTGGTCT...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCGGCTGCCTGGATGCTaGAGGCTTCTCAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: WIWILFVLKVLVTVEKDFRLPGC*RLLRRQ
Trigger: CTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGCCG...AAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGAATAGATGGGTTGGGTaGCCATGCGGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLNRWVG*PCGCSR
Trigger: CCTACTACATCCGCATGGGCACCCAACCCATCTATT...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GATCTTGACTGTGTAGATCTGGAAATAGATGGGTTGGGTGCCCATGCGGATGTATGTGGAGCCGGGCCTTaGTCTGGCTGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DLDCVDLEIDGLGAHADVCGAGP*SGCWCE
Trigger: CTCACACCAACAGCCAGAGCAAGGCCCGGCTCCACA...TACATCCGCATGGGCACCCAACCCATCTATTTCCAGATCTACACAGTCAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTGAGAAGCAGATGTCTTaGGGGAGCCTCCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPEKQMS*GSLHGC
Trigger: ACACCCGTGGAGGCTCCCCCAAGACATCTGCTTCTC...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTTTTTCTGCACAGAGGTaGTTCTTGGTTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGFSAQR*FLVRWQ
Trigger: CTGCCACCGAACCAAGAACCACCTCTGTGCAGAAAA...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTTTTCTGCACAGAGGTaGTTCTTGGTTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAFSAQR*FLVRWQ
Trigger: CTGCCACCGAACCAAGAACCACCTCTGTGCAGAAAA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCCTGTGCAGTAGGGGGTaGGCAGGGTCAGTAACCTTG +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIALCSRG*AGSVTL
Trigger: CAAGGTTACTGACCCTGCCCACCCCCTACTGCACAG...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CGTCAAGTTCTGTTCGGCAATGACCATCCTTTGGTACAGTGTCCCTGGGACAGCGTGAGGCAGAACTTCTaGGTCTCCCGTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RQVLFGNDHPLVQCPWDSVRQNF*VSRFLS
Trigger: ACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCAC...GCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGAGATCTGGAAATAGATaGGTTGGGTGCCCATGCGGA +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLRSGNR*VGCPCG
Trigger: TCCGCATGGGCACCCAACCCATCTATTTCCAGATCT...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTGTCGCTGGCTGGAATaGCCTTCAGGATCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIACRWLE*PSGSAQ
Trigger: CTGGGCTGATCCTGAAGGCCATTCCAGCCAGCGACA...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTACTCTGGTCCCGGCTCTaGATCTGGATATTGTTCGTC +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALLWSRL*IWILFV
Trigger: GACGAACAATATCCAGATCCAGAGCCGGGACCAGAG...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GATTCTCTGGTAGAGCTCTTCTGTGATTCCTGTGGCATTACAGTGTGCAGCAAGGTGTATCCTTCCTCCTaGGCCTGCTGTCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DSLVELFCDSCGITVCSKVYPSS*ACCPCR
Trigger: CCTGCAGGGACAGCAGGCCCAGGAGGAAGGATACAC...CTTGCTGCACACTGTAATGCCACAGGAATCACAGAAGAGCTCTACCAGAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGGCAATGACCATCCTTTaGTACAGTGTCCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLAMTIL*YSVPGT
Trigger: TGTCCCAGGGACACTGTACCAAAGGATGGTCATTGC...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613555.4
ENST00000619866.5
3UTR CAA 72 bp CGACTGTGCAGTAGGGGGTGGGCAGGGTCAGTAACCTaGTGCAAAAGGCATAGATTCTCTGGTAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RLCSRGWAGSVT*CKRHRFSGRAL
Trigger: AAGAGCTCTACCAGAGAATCTATGCCTTTTGCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp CCCGCCAAGTTGGAGGACTTGACAACCTCTGTCACGTaGACATTCAGACATGTGTGGTCTGTGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PAKLEDLTTSVT*TFRHVWSVTGA
Trigger: TGCTCCTGTCACAGACCACACATGTCTGAATGTCAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp GTGTTGATGGGCATCAGAAGGGGCTTGGGCTTGGCTTaGATTGCTTCCACCTCCTGTTGCCCATGCAAATTG +
Preference number: 4 (lower is better)
Translates to: VLMGIRRGLGLA*IASTSCCPCKL
Trigger: CAATTTGCATGGGCAACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCCCCTTCTGATGCCCATCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGSSVRQ*PSFGTV
Trigger: CACTGTACCAAAGGATGGTCATTGCCGAACAGAACT...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR TCA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCTCCCTGAAAGTGCGTTaGTCGTCCTTGTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: WILFVLKVLVTVEKDFPASLKVR*SSLSSD
Trigger: GTCGCTGGACAAGGACGATCAACGCACTTTCAGGGA...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp CGACTGTGCAGTAGGGGGTGGGCAGGGTCAGTAACCTTGTGCAAAAGGCATAGAAGAGAACAAGGTGGTTaGTTTTCTGCACAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RLCSRGWAGSVTLCKRHRREQGG*FSAQRW
Trigger: CCACCTCTGTGCAGAAAAGCAACCACCTTGTTCTCT...TCTATGCCTTTTGCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTAGAGAACAAGGTGGTTaGTTTTCTGCACAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAREQGG*FSAQRW
Trigger: CCACCTCTGTGCAGAAAAGCAACCACCTTGTTCTCT...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCACGTACATTACAGTGTaGAGCAAGGGAATGATGACA +
Preference number: 4 (lower is better)
Translates to: ATVSAASGPGSGSGYCSSTYITV*SKGMMT
Trigger: TGTCATCATTCCCTTGCTGCACACTGTAATGTACGT...GGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR GCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTCCAGTAGCAGAGCACTaGACACAGACGCAGACACCA +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPPVAEH*TQTQTP
Trigger: TGGTGTCTGCGTCTGTGTGCAGTGCTCTGCTACTGG...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp CAGACACCAGCTCAGGATCCACGAAGAGGAACACTCTCTCCTGGTAGGGATACAAATAGATGGGTTGGGTaGCCATGCGGATGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: QTPAQDPRRGTLSPGRDTNRWVG*PCGCSR
Trigger: CCTACTACATCCGCATGGGCACCCAACCCATCTATT...TGTATCCCTACCAGGAGAGAGTGTTCCTCTTCGTGGATCCTGAGCTGGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTAGGAGGAGGAGGATGTaGTTGTCTCGGGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPRRRRM*LSRAAE
Trigger: TTCTGCTGCCCGAGACAACCACATCCTCCTCCTCCT...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp CAGCTCATTCGTCAAGTTCTGTTCGGCAATGACCATCCTTTGGTACAGTGTCCCGCAGGCAGGGGGCAATaGCTAGACCCTGAAACTTCT +
Preference number: 4 (lower is better)
Translates to: QLIRQVLFGNDHPLVQCPAGRGQ*LDPETS
Trigger: AGAAGTTTCAGGGTCTAGCCATTGCCCCCTGCCTGC...GGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGACATTCAGACATGTGTaGTCTGTGACAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLTFRHV*SVTGAA
Trigger: TGCTGCTCCTGTCACAGACCACACATGTCTGAATGT...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GGGAGCAACCTCGAATCTGACCACATCCCTGAAAGTGCGTTGATCGTCCTTGTCTCCCGGCTCTGGATCTaGATATTGTTCGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSNLESDHIPESALIVLVSRLWI*ILFVLK
Trigger: CTTCAGGACGAACAATATCCAGATCCAGAGCCGGGA...GACAAGGACGATCAACGCACTTTCAGGGATGTGGTCAGATTCGAGGTTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTGTGAGTGTTTGGAGTTaGTGGGGTAGTGTATCCTTC +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAVSVWS*WGSVSF
Trigger: GAAGGATACACTACCCCACCAACTCCAAACACTCAC...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GATTCTCTGGTAGAGCTCTTCTGTGATTCCTGTGGCATTACAGTGTGCAGCAAGCCTGGTTTTAAGGGCTaGATGGGGAGCTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DSLVELFCDSCGITVCSKPGFKG*MGSLGG
Trigger: CCCACCCAAGCTCCCCATCCAGCCCTTAAAACCAGG...CTTGCTGCACACTGTAATGCCACAGGAATCACAGAAGAGCTCTACCAGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR TCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAAGTTCTGTTCGGCAATaGCCATCCTTTGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALSSVRQ*PSFGTV
Trigger: CACTGTACCAAAGGATGGTCATTGCCGAACAGAACT...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp GATCCACGAAGAGGAACACTCTCTCCTGGTAGGGATACAGCTCATTCGTCAAGTAAGGGAATGATGACATaGCGGAGGTCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: DPRRGTLSPGRDTAHSSSKGMMT*RRSWLS
Trigger: GGAAAGCCAGGACCTCCGGCATGTCATCATTCCCTT...ACTTGACGAATGAGCTGTATCCCTACCAGGAGAGAGTGTTCCTCTTCGTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCAAGGGAATGATGACATaGCGGAGGTCCTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAKGMMT*RRSWLS
Trigger: GGAAAGCCAGGACCTCCGGCATGTCATCATTCCCTT...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCCATCTGAGCTCTCCATaGGAGCCTTTGGGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: WILFVLKVLVTVEKDFPAHLSSP*EPLGVG
Trigger: TCCTACACCCAAAGGCTCCCATGGAGAGCTCAGATG...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGTGAGGCAGAACTTCTaGGTCTCCCGTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAVRQNF*VSRFLS
Trigger: ACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCAC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCAGGGAATTTAGAATCTTaGATCTTCACCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSGNLES*IFTFSS
Trigger: TGAACTGAAGGTGAAGATCCAAGATTCTAAATTCCC...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTTCTGTGTCGCTGGCTaGAATGGCCTTCAGGATCAG +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAFCVAG*NGLQDQ
Trigger: CTGATCCTGAAGGCCATTCCAGCCAGCGACACAGAA...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp GCAAAAGGCATAGATTCTCTGGTAGAGCTCTTCTGTGATTCCTGTGGCATTACACTCCCAGGCACTCGCTaGCTCCTGGTCAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: AKGIDSLVELFCDSCGITLPGTR*LLVKAK
Trigger: TTTGGCCTTGACCAGGAGCCAGCGAGTGCCTGGGAG...TGTAATGCCACAGGAATCACAGAAGAGCTCTACCAGAGAATCTATGCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTATGAGAAGCTGGGCTTaGTGTGTATGTTCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAMRSWA*CVCSQA
Trigger: TGCTTGAGAACATACACACCAAGCCCAGCTTCTCAT...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp AGTGAGGCAGAACTTCTGGGTCTCCCGTTTCCTGAGTCTGTGGTAGGCCTGGGCATTTGTATGAGAAGCTaGGCTTGGTGTGTATGTTCT +
Preference number: 4 (lower is better)
Translates to: SEAELLGLPFPESVVGLGICMRS*AWCVCS
Trigger: AGAACATACACACCAAGCCCAGCTTCTCATACAAAT...GCCCAGGCCTACCACAGACTCAGGAAACGGGAGACCCAGAAGTTCTGCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR TCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTACCAGAGAATGTGTTaGTGGGCATCAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAYQRMC*WASEGA
Trigger: AGCCCCTTCTGATGCCCATCAACACATTCTCTGGTA...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGGGGTCAGTAACCTTGTaGAAAAGGCATAGATTCTCT +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLGSVTL*KRHRFS
Trigger: AGAGAATCTATGCCTTTTGCACAAGGTTACTGACCC...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR GCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTTGGTACAGTGTCCCTaGAAACCAGACCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIALVQCP*KPDHFG
Trigger: GCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAA...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR GCA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCGGGAGGTGGTGCTGTTaGTGTTCCTTGCTTCCAATT +
Preference number: 4 (lower is better)
Translates to: WILFVLKVLVTVEKDFPAGRWCC*CSLLPI
Trigger: AATTGGAAGCAAGGAACAGCAACAGCACCACCTCCC...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR GCA 90 bp GATTCTCTGGTAGAGCTCTTCTGTGATTCCTGTGGCATTACAGTGTGCAGCAAGTTGGGAGGGAGGTGGTaGTGTTGCTGTTCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: DSLVELFCDSCGITVCSKLGGRW*CCCSLL
Trigger: AAGCAAGGAACAGCAACAGCACCACCTCCCTCCCAA...CTTGCTGCACACTGTAATGCCACAGGAATCACAGAAGAGCTCTACCAGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR GCA 90 bp CGTCAAGTTCTGTTCGGCAATGACCATCCTTTGGTACAGTGTCCCTGGGACAGCTGTGGCATTACAGTGTaGAGCAAGGGAATGATGACA +
Preference number: 4 (lower is better)
Translates to: RQVLFGNDHPLVQCPWDSCGITV*SKGMMT
Trigger: TGTCATCATTCCCTTGCTGCACACTGTAATGCCACA...GCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTTCCCGGCTCTGGATCTaGATATTGTTCGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPSRLWI*ILFVLK
Trigger: CTTCAGGACGAACAATATCCAGATCCAGAGCCGGGA...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTTCCCTGCAGGCTCACTaGACAATACCAGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPSLQAH*TIPENV
Trigger: CACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGA...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTGATGGGGAGCTTGGGTaGGAGAGGACAGTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WIWILFVLKVLVTVEKDFDGELG*ERTVGE
Trigger: TTCTCCCACTGTCCTCTCCCACCCAAGCTCCCCATC...AAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCAGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp CTCATTCGTCAAGTTCTGTTCGGCAATGACCATCCTTaGGTACAGTGTCCCTGCAAACCAGACCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: LIRQVLFGNDHP*VQCPCKPDHFG
Trigger: GCCAAAGTGGTCTGGTTTGCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
3UTR CAA 72 bp GTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCAAGTaGGAGGACTTGACAACCTCTGTCACGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: VLVTVEKDFPAK*EDLTTSVTLTF
Trigger: GAATGTCAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTCCTTCTCTACAGTGACCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
3UTR CAA 72 bp CTCATTCGTCAAGTTCTGTTCGGCAATGACCATCCTTaGGTACAGTGTCCCTGGGACAGCCATCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LIRQVLFGNDHP*VQCPWDSHLRF
Trigger: AAAACGGAGATGGCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACGAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR TCA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCGGTAGAGCTCTTCTGTaGTTCCTGTGGCATTACAGT +
Preference number: 4 (lower is better)
Translates to: WILFVLKVLVTVEKDFPAGRALL*FLWHYS
Trigger: ACTGTAATGCCACAGGAATCACAGAAGAGCTCTACC...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR GCA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACGTACATTACAGTGTaGAGCAAGGGAATGATGACA +
Preference number: 4 (lower is better)
Translates to: LASNFPLGHRALAKTAALTYITV*SKGMMT
Trigger: TGTCATCATTCCCTTGCTGCACACTGTAATGTACGT...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCAGTGTTTGGAGTTGGTaGGGTAGTGTATCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIASVWSW*GSVSFL
Trigger: GAGGAAGGATACACTACCCCACCAACTCCAAACACT...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CCA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGTTGGTGTGAGTGTTTaGAGTTGGTGGGGTAGTGTA +
Preference number: 4 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAVGVSV*SWWGSV
Trigger: TACACTACCCCACCAACTCCAAACACTCACACCAAC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR CAA 72 bp ACTGTAGAGAAGGACTTTCCCGCCAAGTTGGAGGACTaGACAACCTCTGTCACGTTGACATTCAGACATGTG +
Preference number: 4 (lower is better)
Translates to: TVEKDFPAKLED*TTSVTLTFRHV
Trigger: CACATGTCTGAATGTCAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTCCTTCTCTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGGGGAATTTAGAATCTTaGATCTTCACCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SNFPLGHRALAKTAALTLGNLES*IFTFSS
Trigger: TGAACTGAAGGTGAAGATCCAAGATTCTAAATTCCC...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
3UTR CAA 72 bp AAAGATCTTGACTGTGTAGATCTGGAAATAGATGGGTaGGGTGCCCATGCGGATGTAGTAGGTGATGACGTC +
Preference number: 4 (lower is better)
Translates to: KDLDCVDLEIDG*GAHADVVGDDV
Trigger: GACGTCATCACCTACTACATCCGCATGGGCACCCAACCCATCTATTTCCAGATCTACACAGTCAAGATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CCA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTATTTGTATGAGAAGCTaGGCTTGGTGTGTATGTTCT +
Preference number: 4 (lower is better)
Translates to: CMRSWAWCVCSQAATALPICMRS*AWCVCS
Trigger: AGAACATACACACCAAGCCCAGCTTCTCATACAAAT...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGGTGCAGCCCTGGGCAGGGGAATGCTaGGTGGCCGCTCTTGGACAA +
Preference number: 5 (lower is better)
Translates to: AGQHFPIPTGPACPPVQPWAGEC*VAALGQ
Trigger: TTGTCCAAGAGCGGCCACCAAGCATTCCCCTGCCCA...GGGCTGCACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp ACAGCACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCATTCTTGATGCCCCCTTaGCGCTGCAGCCCGGCTCGC +
Preference number: 5 (lower is better)
Translates to: TAQKPGPTPGPAGGPADPFLMPP*RCSPAR
Trigger: GCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAA...TGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCCACCTCCACATGCCTaGGTTGCTCTGCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: VQGPCTLLDAPFALQPGSPPPHA*VALQGR
Trigger: CCTGCCCTGCAGAGCAACCAAGGCATGTGGAGGTGG...CGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACTCTCGCTCGACCTTCTaGTGCAGGGACCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: HRNPGQLPVRPEALQIQDSRSTF*CRDHLH
Trigger: GTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCGAGA...GTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGTTCTTGATGCCCCCTTaGCGCTGCAGCCCGGCTCGC +
Preference number: 5 (lower is better)
Translates to: VSGVCCAWAASISSSRALFLMPP*RCSPAR
Trigger: GCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAA...CAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTGCGGGGCACAGCGTGTaGACGTTGCTCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCAGHSV*TLLWYH
Trigger: GTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGC...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGGTGCAGCCCATCCCTGAAAGTGCGTaGATCGTCCTTGTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: AGQHFPIPTGPACPPVQPIPESA*IVLVQR
Trigger: TCGCTGGACAAGGACGATCAACGCACTTTCAGGGAT...GGGCTGCACCGGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp ATCAGCCCAGTGGCCCGCAGGGAAACGGTGACCTCTCGGGGCCGGTGGCTAAGCCAAGCAGCGACAGCATaGCCTGGGCCATCCGTAGAC +
Preference number: 5 (lower is better)
Translates to: ISPVARRETVTSRGRWLSQAATA*PGPSVD
Trigger: GTCTACGGATGGCCCAGGCAATGCTGTCGCTGCTTG...GCTTAGCCACCGGCCCCGAGAGGTCACCGTTTCCCTGCGGGCCACTGGGCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTCTCGCTCGACCTTCTaGTGCAGGGACCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCSRSTF*CRDHLH
Trigger: GTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCGAGA...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTGCTTGGTGGCCGCTCTaGGACAAGGTCACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSAWWPL*DKVTCS
Trigger: GCTGCAGGTGACCTTGTCCAAGAGCGGCCACCAAGC...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS GCA 90 bp CGGACCAGCACTGGGCTCTTACCGGGATCTCGCTCGACCTTCTTGTaGAGGGACCACCTCCACATGCCTTGGTTGCTCTGCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RTSTGLLPGSRSTFL*RDHLHMPWLLCRAG
Trigger: CCCTGCCCTGCAGAGCAACCAAGGCATGTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCGAGATCCCGGTAAGAGCCCAGTGCTGGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTAGAGAAGCAGATGTCTaGGGGGAGCCTCCACGGGTG +
Preference number: 5 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSREADV*GEPPRV
Trigger: CACCCGTGGAGGCTCCCCCAAGACATCTGCTTCTCT...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGTCTCGCTCGACCTTCTaGTGCAGGGACCACCTCCAC +
Preference number: 5 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLSRSTF*CRDHLH
Trigger: GTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCGAGA...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CCATCTCAGGGCTGCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCCTGGAAATAGATGGGTaGGGTGCCCATGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: PSQGCRVQAAHQPPWEGPLEIDG*GAHADV
Trigger: TACATCCGCATGGGCACCCAACCCATCTATTTCCAG...GGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGCAGCCCTGAGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCCAAGTCAGCACTGAGGCGGGCTTGGGCTTGGCTTaGATTGCTTCCACCTCCTGT +
Preference number: 5 (lower is better)
Translates to: PVRPEALQIQDLQVSTEAGLGLA*IASTSC
Trigger: ACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCC...CGCCTCAGTGCTGACTTGGAGGTCTTGGATCTGCAGGGCCTCCGGCCGGACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CCACCACGGCGTGGAAATAGTGCTCCAGGGTGCGGCGAGGGCTGGCCTGCAGCTGGCATCAGAAGGGGCTaGGGCTTGGCTTTGATTGCT +
Preference number: 5 (lower is better)
Translates to: PPRRGNSAPGCGEGWPAAGIRRG*GLALIA
Trigger: AGCAATCAAAGCCAAGCCCAAGCCCCTTCTGATGCC...AGCTGCAGGCCAGCCCTCGCCGCACCCTGGAGCACTATTTCCACGCCGTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp AGGTCCCGCTCAATGCCGCTGTCAGTGGACAGCACAGAAACCCGGGCCAACTCCAGAGAAGCAGATGTCTaGGGGGAGCCTCCACGGGTG +
Preference number: 5 (lower is better)
Translates to: RSRSMPLSVDSTETRANSREADV*GEPPRV
Trigger: CACCCGTGGAGGCTCCCCCAAGACATCTGCTTCTCT...GGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCAAACCAGACCACTTaGGCCAAACAGCCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALANQTT*AKQPPS
Trigger: ACTTGGGGGCTGTTTGGCCAAAGTGGTCTGGTTTGC...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp ACCCAGCAGCGAGCAGTAAATCTCCTCCAGCCTCTCTACGTGTCCCTCCCGGCTGCGGGGCACAGCGTGTaGACGTTGCTCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: TQQRAVNLLQPLYVSLPAAGHSV*TLLWYH
Trigger: GTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGC...AGCCGGGAGGGACACGTAGAGAGGCTGGAGGAGATTTACTGCTCGCTGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp GGCATCAAGAAGTCCAGGGGCCATGCACGCTTCTTGATGCCCCCTTTGCGCTGCGCGGGGCACAGCGTGTaGACGTTGCTCTGGTACCAC +
Preference number: 5 (lower is better)
Translates to: GIKKSRGHARFLMPPLRCAGHSV*TLLWYH
Trigger: GTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGC...GCAGCGCAAAGGGGGCATCAAGAAGCGTGCATGGCCCCTGGACTTCTTGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GCCGGGTGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCCTCAGTAGGGTCTaGGCTCAGGTCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: AGCRQLISPRGKVPLNAAVLSRV*AQVTEK
Trigger: TTTTTCAGTGACCTGAGCCAAGACCCTACTGAGGAC...AGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCACCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGGACTTTCCCGCCAAGTaGGAGGACTTGACAACCTCT +
Preference number: 5 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLDFPAK*EDLTTS
Trigger: AGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTC...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGATCCCTGAAAGTGCGTaGATCGTCCTTGTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLIPESA*IVLVQR
Trigger: TCGCTGGACAAGGACGATCAACGCACTTTCAGGGAT...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTAGAAGGGGCTTGGGCTaGGCTTTGATTGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCRRGLG*ALIAST
Trigger: GGTGGAAGCAATCAAAGCCAAGCCCAAGCCCCTTCT...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGAGAAGGGGCTTGGGCTaGGCTTTGATTGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALRRGLG*ALIAST
Trigger: GGTGGAAGCAATCAAAGCCAAGCCCAAGCCCCTTCT...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp AGCAGCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCCAAGCAGCGACAGCATaGCCTGGGCCATCCGTAGAC +
Preference number: 5 (lower is better)
Translates to: SSDSIAWAIRRPPCGPFLQAATA*PGPSVD
Trigger: GTCTACGGATGGCCCAGGCAATGCTGTCGCTGCTTG...GAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGAGGGAGGTGGTGCTGTaGCTGTTCCTTGCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLREVVL*LFLASN
Trigger: ATTGGAAGCAAGGAACAGCAACAGCACCACCTCCCT...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTGGCAATGACCATCCTTaGGTACAGTGTCCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCGNDHP*VQCPWD
Trigger: GTCCCAGGGACACTGTACCAAAGGATGGTCATTGCC...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GCTGCCTGGATGCTGCAGGCTTCTCAGGCGCCAGCACGGGGATGTAGTAGAGCTAAGGTGTGGAGGCTTTaGAGCTCCCCGGTATCCTGG +
Preference number: 5 (lower is better)
Translates to: AAWMLQASQAPARGCSRAKVWRL*SSPVSW
Trigger: CCAGGATACCGGGGAGCTCAAAAGCCTCCACACCTT...AGCTCTACTACATCCCCGTGCTGGCGCCTGAGAAGCCTGCAGCATCCAGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp CAGAAGGTGTGGAGGCTTTTGAGCTCCCCGGTATCCTGGGACAGCCATCTCCGTGCTTGGTGGCCGCTCTaGGACAAGGTCACCACCGCA +
Preference number: 5 (lower is better)
Translates to: QKVWRLLSSPVSWDSHLRAWWPL*DKVTTA
Trigger: TGCGGTGGTGACCTTGTCCAAGAGCGGCCACCAAGC...ACGGAGATGGCTGTCCCAGGATACCGGGGAGCTCAAAAGCCTCCACACCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp CTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCCTGGAAATAGATGGGTaGGGTGCCCATGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: LLDAPFALQPGSLHLRAALEIDG*GAHADV
Trigger: TACATCCGCATGGGCACCCAACCCATCTATTTCCAG...GGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GCCGGGACACGCCGGGCAGCATTTCCCCATCCCCACTGGGCCGGCCTGTCCTCCGGGGAATTTAGAATCTaGGATCTTCACCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: AGTRRAAFPHPHWAGLSSGEFRI*DLHLQF
Trigger: GAACTGAAGGTGAAGATCCAAGATTCTAAATTCCCC...GGAGGACAGGCCGGCCCAGTGGGGATGGGGAAATGCTGCCCGGCGTGTCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTGCCAAGTTGGAGGACTaGACAACCTCTGTCACGTTG +
Preference number: 5 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCAKLED*TTSVTL
Trigger: CAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGC...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGACTTTCCCGCCAAGTaGGAGGACTTGACAACCTCT +
Preference number: 5 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALDFPAK*EDLTTS
Trigger: AGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTC...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTGACTTTCCCGCCAAGTaGGAGGACTTGACAACCTCT +
Preference number: 5 (lower is better)
Translates to: GSWSRPKLPCGAGPCSGCDFPAK*EDLTTS
Trigger: AGAGGTTGTCAAGTCCTCCAACTTGGCGGGAAAGTC...ACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGGGTTTCGTCCTGAAGGTGTaGGTCACTGTAGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: LMPPLRCSPARSISGLPGFVLKV*VTVEKD
Trigger: GTCCTTCTCTACAGTGACCAACACCTTCAGGACGAA...ACCCGGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TCGCTGGCTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGAGGGAGGTGGTGCTGTaGCTGTTCCTTGCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: SLAPGQGQSCRVEPGLALREVVL*LFLASN
Trigger: ATTGGAAGCAAGGAACAGCAACAGCACCACCTCCCT...CAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAGCCAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGTTCTTGATGCCCCCTTaGCGCTGCAGCCCGGCTCGC +
Preference number: 5 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLFLMPP*RCSPAR
Trigger: GCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAA...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CCTGGGCCTGCTGTCCCTGCAGGCTCACTGGACAATACCAGAGAATGTGTTGATGGCATCTCAGCCAGCTaGTGGATGGCGGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: PGPAVPAGSLDNTRECVDGISAS*WMAGHS
Trigger: GCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC...ATCAACACATTCTCTGGTATTGTCCAGTGAGCCTGCAGGGACAGCAGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTGGCATCTCAGCCAGCTaGTGGATGGCGGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAGISAS*WMAGHS
Trigger: GCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGCGCCTGGGCCGCCTCGATACAACCTCTGTCACGTaGACATTCAGACATGTGTGG +
Preference number: 5 (lower is better)
Translates to: DHVAHAGLWCLLRLGRLDTTSVT*TFRHVW
Trigger: CCACACATGTCTGAATGTCAACGTGACAGAGGTTGT...ATCGAGGCGGCCCAGGCGCAGCAGACACCAGAGACCTGCATGCGCCACGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTGCCAAGTTGGAGGACTaGACAACCTCTGTCACGTTG +
Preference number: 5 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSAKLED*TTSVTL
Trigger: CAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGC...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CACAGAAACCCGGGCCAACTCCCGGTCCGGCCGGAGGCCCTGCAGATCCAAGACCTCTGGATCTGGATATaGTTCGTCCTGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: HRNPGQLPVRPEALQIQDLWIWI*FVLKVL
Trigger: CAACACCTTCAGGACGAACAATATCCAGATCCAGAG...GTCTTGGATCTGCAGGGCCTCCGGCCGGACCGGGAGTTGGCCCGGGTTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCTTGAGCCACGGTGCCTaGGACTTCTGGGCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVLSHGA*DFWAPE
Trigger: TTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAA...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp AGGTCCCGCTCAATGCCGCTGTCAGTGGACAGCACAGAAACCCGGGCCAACTCCAGAAGGGGCTTGGGCTaGGCTTTGATTGCTTCCACC +
Preference number: 5 (lower is better)
Translates to: RSRSMPLSVDSTETRANSRRGLG*ALIAST
Trigger: GGTGGAAGCAATCAAAGCCAAGCCCAAGCCCCTTCT...GGAGTTGGCCCGGGTTTCTGTGCTGTCCACTGACAGCGGCATTGAGCGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TGCAGGCAGCTCATCAGCCCCCGTGGGAAGGTCCCGCTCAATGCCGCTGTCAGTAGGGAGGTGGTGCTGTaGCTGTTCCTTGCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: CRQLISPRGKVPLNAAVSREVVL*LFLASN
Trigger: ATTGGAAGCAAGGAACAGCAACAGCACCACCTCCCT...ACTGACAGCGGCATTGAGCGGGACCTTCCCACGGGGGCTGATGAGCTGCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CAGAAGGTGTGGAGGCTTTTGAGCTCCCCGGTATCCTGGGACAGCCATCTCCGTTCTCCATGGGAGCCTTaGGGTGTAGGAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: QKVWRLLSSPVSWDSHLRSPWEP*GVGGGG
Trigger: TCCTCCTCCTCCTACACCCAAAGGCTCCCATGGAGA...ACGGAGATGGCTGTCCCAGGATACCGGGGAGCTCAAAAGCCTCCACACCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTCCACCTCCACATGCCTaGGTTGCTCTGCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAPPPHA*VALQGR
Trigger: CCTGCCCTGCAGAGCAACCAAGGCATGTGGAGGTGG...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGCCACCTCCACATGCCTaGGTTGCTCTGCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SNFPLGHRALAKTAALTLPPPHA*VALQGR
Trigger: CCTGCCCTGCAGAGCAACCAAGGCATGTGGAGGTGG...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CTTCTTGATGCCCCCTTTGCGCTGCAGCCCGGCTCGCTCCATCTCAGGGCTGCCGCAGGGTCAGTAACCTaGTGCAAAAGGCATAGATTC +
Preference number: 5 (lower is better)
Translates to: LLDAPFALQPGSLHLRAAAGSVT*CKRHRF
Trigger: GAATCTATGCCTTTTGCACAAGGTTACTGACCCTGC...GGCAGCCCTGAGATGGAGCGAGCCGGGCTGCAGCGCAAAGGGGGCATCAAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GTCTGCTGCGCCTGGGCCGCCTCGATCTCCAGTAGCAGAGCACTGCACACAGACGGCAATGACCATCCTTaGGTACAGTGTCCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: VCCAWAASISSSRALHTDGNDHP*VQCPCK
Trigger: TTTGCAGGGACACTGTACCAAAGGATGGTCATTGCC...GTCTGTGTGCAGTGCTCTGCTACTGGAGATCGAGGCGGCCCAGGCGCAGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTGCTTGGTGGCCGCTCTaGGACAAGGTCACCACCGCA +
Preference number: 5 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGAWWPL*DKVTTA
Trigger: TGCGGTGGTGACCTTGTCCAAGAGCGGCCACCAAGC...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CAA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCCACAGCGTGTTGACGTaGCTCTGGTACCACGGGTCT +
Preference number: 5 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVHSVLT*LWYHGS
Trigger: AGACCCGTGGTACCAGAGCAACGTCAACACGCTGTG...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGGCATCTCAGCCAGCTaGTGGATGGCGGGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LWSRLWIWILFVLKVLVTGISAS*WMAGHS
Trigger: GCTGTGCCCCGCCATCCACAAGCTGGCTGAGATGCC...AGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CCCAGCATCCTGTCATCTCCGAGCACAAGTACCCGGGCTGTGTGCAGCCGGGACGTCCTCAGTAGGGTCTaGGCTCAGGTCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: PSILSSPSTSTRAVCSRDVLSRV*AQVTEK
Trigger: TTTTTCAGTGACCTGAGCCAAGACCCTACTGAGGAC...GTCCCGGCTGCACACAGCCCGGGTACTTGTGCTCGGAGATGACAGGATGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp AAGAGCACCAGTTCCTTCCAGAGCTGCTCCTCACCGGTCCACAAGTGGAAGGTGTTGAGCCACGGTGCCTaGGACTTCTGGGCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: KSTSSFQSCSSPVHKWKVLSHGA*DFWAPE
Trigger: TTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAA...CACCTTCCACTTGTGGACCGGTGAGGAGCAGCTCTGGAAGGAACTGGTGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS TCA 90 bp CCGTCTTCCTCCCTGAGGTCCAGGAACTCACCTTCTCCAGTTCTCTaGGAAGAATGCGGACCAGCACTGGGCTCTTACCGGGATCTCGCT +
Preference number: 5 (lower is better)
Translates to: PSSSLRSRNSPSPVL*EECGPALGSYRDLA
Trigger: AGCGAGATCCCGGTAAGAGCCCAGTGCTGGTCCGCATTCTTCTCAGAGAACTGGAGAAGGTGAGTTCCTGGACCTCAGGGAGGAAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS CCA 90 bp GCTTTCCGCCTTCTCCAGTTCTCTGAGAAGAATGCGGACCAGCACTaGGCTCTTACCGGGATCTCGCTCGACCTTCTTGTGCAGGGACCA +
Preference number: 5 (lower is better)
Translates to: AFRLLQFSEKNADQH*ALTGISLDLLVQGP
Trigger: TGGTCCCTGCACAAGAAGGTCGAGCGAGATCCCGGTAAGAGCCCAGTGCTGGTCCGCATTCTTCTCAGAGAACTGGAGAAGGCGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619866.5
CDS-3UTR CAA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTAGAGAAGCAGATGTCTaGGGGGAGCCTCCACGGGTG +
Preference number: 5 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGREADV*GEPPRV
Trigger: CACCCGTGGAGGCTCCCCCAAGACATCTGCTTCTCT...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CATCCTGTCATCTCCGAGCACAAGTACCCGGGCTGTGTGCAGCCGGGACACGCCGCAGGGTCAGTAACCTaGTGCAAAAGGCATAGATTC +
Preference number: 5 (lower is better)
Translates to: HPVISEHKYPGCVQPGHAAGSVT*CKRHRF
Trigger: GAATCTATGCCTTTTGCACAAGGTTACTGACCCTGC...GGCGTGTCCCGGCTGCACACAGCCCGGGTACTTGTGCTCGGAGATGACAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CTCCTGGTCAAGGCCAAAGCTGCCGTGTGGAGCCGGGCCTTGCTCTGGCTGTTGGCAGGGTCAGTAACCTaGTGCAAAAGGCATAGATTC +
Preference number: 5 (lower is better)
Translates to: LLVKAKAAVWSRALLWLLAGSVT*CKRHRF
Trigger: GAATCTATGCCTTTTGCACAAGGTTACTGACCCTGC...CAACAGCCAGAGCAAGGCCCGGCTCCACACGGCAGCTTTGGCCTTGACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGTGGGCAGGGGAATGCTaGGTGGCCGCTCTTGGACAA +
Preference number: 5 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLWAGEC*VAALGQ
Trigger: TTGTCCAAGAGCGGCCACCAAGCATTCCCCTGCCCA...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GCTCTGGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGCAGGGGAATGCTaGGTGGCCGCTCTTGGACAA +
Preference number: 5 (lower is better)
Translates to: ALAKTAALTLVLRAGWGAWAGEC*VAALGQ
Trigger: TTGTCCAAGAGCGGCCACCAAGCATTCCCCTGCCCA...AGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CGCCTGCAGGGCGTGGGAGACCACGTGGCGCATGCAGGTCTCTGGTGTCTGCTGGGGGAATTTAGAATCTaGGATCTTCACCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: RLQGVGDHVAHAGLWCLLGEFRI*DLHLQF
Trigger: GAACTGAAGGTGAAGATCCAAGATTCTAAATTCCCC...CAGCAGACACCAGAGACCTGCATGCGCCACGTGGTCTCCCACGCCCTGCAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CATCCTGTCATCTCCGAGCACAAGTACCCGGGCTGTGTGCAGCCGGGACACGCCACAACCTCTGTCACGTaGACATTCAGACATGTGTGG +
Preference number: 5 (lower is better)
Translates to: HPVISEHKYPGCVQPGHATTSVT*TFRHVW
Trigger: CCACACATGTCTGAATGTCAACGTGACAGAGGTTGT...GGCGTGTCCCGGCTGCACACAGCCCGGGTACTTGTGCTCGGAGATGACAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GTGGATGGCGGGGCACAGCGTGTTGACGTTGCTCTGGTACCACGGGTCTACGCGCTCTGGATCTGGATATaGTTCGTCCTGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: VDGGAQRVDVALVPRVYALWIWI*FVLKVL
Trigger: CAACACCTTCAGGACGAACAATATCCAGATCCAGAG...CGCGTAGACCCGTGGTACCAGAGCAACGTCAACACGCTGTGCCCCGCCATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp CGACTGTGCAGTAGGGGGTGGGCAGGGTCAGTAACCTTGTGCAAAAGGCATAGATTGAGCCACGGTGCCTaGGACTTCTGGGCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RLCSRGWAGSVTLCKRHRLSHGA*DFWAPE
Trigger: TTCTGGGGCCCAGAAGTCCAAGGCACCGTGGCTCAA...TCTATGCCTTTTGCACAAGGTTACTGACCCTGCCCACCCCCTACTGCACAGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GCGACAGTGTCAGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCGGCATCAGAAGGGGCTaGGGCTTGGCTTTGATTGCT +
Preference number: 5 (lower is better)
Translates to: ATVSAASGPGSGSGYCSSGIRRG*GLALIA
Trigger: AGCAATCAAAGCCAAGCCCAAGCCCCTTCTGATGCC...GGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCTGACACTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGCAAGCAGCGACAGCATaGCCTGGGCCATCCGTAGAC +
Preference number: 5 (lower is better)
Translates to: SNFPLGHRALAKTAALTLQAATA*PGPSVD
Trigger: GTCTACGGATGGCCCAGGCAATGCTGTCGCTGCTTG...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp AGCAGCCTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGCACAGAGGTGGTTCTaGGTTCGGTGGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SSLWSRLWIWILFVLKVLAQRWF*VRWQLL
Trigger: CAGAAGCTGCCACCGAACCAAGAACCACCTCTGTGC...CAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTTCTCCATGGGAGCCTTaGGGTGTAGGAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGSPWEP*GVGGGG
Trigger: TCCTCCTCCTCCTACACCCAAAGGCTCCCATGGAGA...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GCGACAGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCATTCGTCCTGAAGGTGTaGGTCACTGTAGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: ATALPGPSVDLHVGPSSSFVLKV*VTVEKD
Trigger: GTCCTTCTCTACAGTGACCAACACCTTCAGGACGAA...TGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCTGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCGTGATTCCTGTGGCCTaGGTGAGCACGTACATTACA +
Preference number: 5 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVVIPVA*VSTYIT
Trigger: TGTAATGTACGTGCTCACCAAGGCCACAGGAATCAC...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000619866.5
CDS-3UTR CAA 90 bp CGTCAAGTTCTGTTCGGCAATGACCATCCTTTGGTACAGTGTCCCTGGGACAGCCACAGCGTGTTGACGTaGCTCTGGTACCACGGGTCT +
Preference number: 5 (lower is better)
Translates to: RQVLFGNDHPLVQCPWDSHSVLT*LWYHGS
Trigger: AGACCCGTGGTACCAGAGCAACGTCAACACGCTGTG...GCTGTCCCAGGGACACTGTACCAAAGGATGGTCATTGCCGAACAGAACTTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CAA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTGGCTTGGGCTTGGCTTaGATTGCTTCCACCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGGLGLA*IASTSC
Trigger: ACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCC...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GATGACATGCCGGAGGTCCTGGCTTTCCGCCTTCTGTTTCTGACAAGTGATGCGGGCAATGACCATCCTTaGGTACAGTGTCCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: DDMPEVLAFRLLFLTSDAGNDHP*VQCPWD
Trigger: GTCCCAGGGACACTGTACCAAAGGATGGTCATTGCC...CGCATCACTTGTCAGAAACAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613555.4
CDS-3UTR CAA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCACAACCTCTGTCACGTaGACATTCAGACATGTGTGG +
Preference number: 5 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVTTSVT*TFRHVW
Trigger: CCACACATGTCTGAATGTCAACGTGACAGAGGTTGT...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGGCCAAGTTGGAGGACTaGACAACCTCTGTCACGTTG +
Preference number: 5 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLAKLED*TTSVTL
Trigger: CAACGTGACAGAGGTTGTCAAGTCCTCCAACTTGGC...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GGCCAAGACAGCAGCTTTAACCCTGGTTTTAAGGGCTGGATGGGGAGCTTGGGTATCCCTGAAAGTGCGTaGATCGTCCTTGTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: GQDSSFNPGFKGWMGSLGIPESA*IVLVQR
Trigger: TCGCTGGACAAGGACGATCAACGCACTTTCAGGGAT...ACCCAAGCTCCCCATCCAGCCCTTAAAACCAGGGTTAAAGCTGCTGTCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS GCA 90 bp GGAGGATGTGGTTGTCTCGGGCAGCAGAATAGAGAACAAGGTGGTTaGTTTTCTGCACAGAGGTGGTTCTTGGTTCGGTGGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GGCGCLGQQNREQGG*FSAQRWFLVRWQLL
Trigger: CAGAAGCTGCCACCGAACCAAGAACCACCTCTGTGCAGAAAAGCAACCACCTTGTTCTCTATTCTGCTGCCCGAGACAACCACATCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGCACAGAGGTGGTTCTaGGTTCGGTGGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAAQRWF*VRWQLL
Trigger: CAGAAGCTGCCACCGAACCAAGAACCACCTCTGTGC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCTCTCCATGGGAGCCTTaGGGTGTAGGAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: WILFVLKVLVTVEKDFPASPWEP*GVGGGG
Trigger: TCCTCCTCCTCCTACACCCAAAGGCTCCCATGGAGA...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTCACAGCGTGTTGACGTaGCTCTGGTACCACGGGTCT +
Preference number: 5 (lower is better)
Translates to: CMRSWAWCVCSQAATALPHSVLT*LWYHGS
Trigger: AGACCCGTGGTACCAGAGCAACGTCAACACGCTGTG...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS GCA 90 bp TTGGTGAGCACGTACATTACAGTGTGCAGCAAGGGAATGATGACATaGCGGAGGTCCTGGCTTTCCGCCTTCTCCAGTTCTCTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LVSTYITVCSKGMMT*RRSWLSAFSSSLRR
Trigger: TCTTCTCAGAGAACTGGAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATCATTCCCTTGCTGCACACTGTAATGTACGTGCTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619866.5
CDS-3UTR CAA 90 bp CTCTGGTCCCGGCTCTGGATCTGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTGATTCCTGTGGCCTaGGTGAGCACGTACATTACA +
Preference number: 5 (lower is better)
Translates to: LWSRLWIWILFVLKVLVTVIPVA*VSTYIT
Trigger: TGTAATGTACGTGCTCACCAAGGCCACAGGAATCAC...AGTGACCAACACCTTCAGGACGAACAATATCCAGATCCAGAGCCGGGACCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611951.4
CDS-3UTR CAA 90 bp CTTGCTTCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAGTCCTCAGTAGGGTCTaGGCTCAGGTCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LASNFPLGHRALAKTAALVLSRV*AQVTEK
Trigger: TTTTTCAGTGACCTGAGCCAAGACCCTACTGAGGAC...TAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGAAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp AGCATTGCCTGGGCCATCCGTAGACCTCCATGTGGGCCCTTCCTCATCACAGTCGGTGAAAAGCCATCTTaGGGGAATTTAGAATCTTGG +
Preference number: 5 (lower is better)
Translates to: SIAWAIRRPPCGPFLITVGEKPS*GNLESW
Trigger: CCAAGATTCTAAATTCCCCAAAGATGGCTTTTCACC...GACTGTGATGAGGAAGGGCCCACATGGAGGTCTACGGATGGCCCAGGCAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TCCAATTTTCCCCTAGGCCACAGGGCTCTGGCCAAGACAGCAGCTTTAACCCTGCTCTGGATCTGGATATaGTTCGTCCTGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SNFPLGHRALAKTAALTLLWIWI*FVLKVL
Trigger: CAACACCTTCAGGACGAACAATATCCAGATCCAGAG...CAGGGTTAAAGCTGCTGTCTTGGCCAGAGCCCTGTGGCCTAGGGGAAAATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TGGATATTGTTCGTCCTGAAGGTGTTGGTCACTGTAGAGAAGGACTTTCCCGCCGGCTTGGGCTTGGCTTaGATTGCTTCCACCTCCTGT +
Preference number: 5 (lower is better)
Translates to: WILFVLKVLVTVEKDFPAGLGLA*IASTSC
Trigger: ACAGGAGGTGGAAGCAATCAAAGCCAAGCCCAAGCC...GGCGGGAAAGTCCTTCTCTACAGTGACCAACACCTTCAGGACGAACAATATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCTGGCATCAGAAGGGGCTaGGGCTTGGCTTTGATTGCT +
Preference number: 5 (lower is better)
Translates to: CMRSWAWCVCSQAATALPGIRRG*GLALIA
Trigger: AGCAATCAAAGCCAAGCCCAAGCCCCTTCTGATGCC...AGGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCCTGGAAATAGATGGGTaGGGTGCCCATGCGGATGTA +
Preference number: 5 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIALEIDG*GAHADV
Trigger: TACATCCGCATGGGCACCCAACCCATCTATTTCCAG...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GTTGGTGTGAGTGTTTGGAGTTGGTGGGGTAGTGTATCCTTCCTCCTGGGCCTGGGGGAATTTAGAATCTaGGATCTTCACCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: VGVSVWSWWGSVSFLLGLGEFRI*DLHLQF
Trigger: GAACTGAAGGTGAAGATCCAAGATTCTAAATTCCCC...CAGGCCCAGGAGGAAGGATACACTACCCCACCAACTCCAAACACTCACACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS-3UTR CAA 90 bp GATCTTGACTGTGTAGATCTGGAAATAGATGGGTTGGGTGCCCATGCGGATGTATTCGTCCTGAAGGTGTaGGTCACTGTAGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DLDCVDLEIDGLGAHADVFVLKV*VTVEKD
Trigger: GTCCTTCTCTACAGTGACCAACACCTTCAGGACGAA...TACATCCGCATGGGCACCCAACCCATCTATTTCCAGATCTACACAGTCAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp GATCCACGAAGAGGAACACTCTCTCCTGGTAGGGATACAGCTCATTCGTCAAGTGGTGAAAAGCCATCTTaGGGGAATTTAGAATCTTGG +
Preference number: 5 (lower is better)
Translates to: DPRRGTLSPGRDTAHSSSGEKPS*GNLESW
Trigger: CCAAGATTCTAAATTCCCCAAAGATGGCTTTTCACC...ACTTGACGAATGAGCTGTATCCCTACCAGGAGAGAGTGTTCCTCTTCGTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS-3UTR CAA 90 bp TTGTATGAGAAGCTGGGCTTGGTGTGTATGTTCTCAAGCAGCGACAGCATTGCCGGTGAAAAGCCATCTTaGGGGAATTTAGAATCTTGG +
Preference number: 5 (lower is better)
Translates to: LYEKLGLVCMFSSSDSIAGEKPS*GNLESW
Trigger: CCAAGATTCTAAATTCCCCAAAGATGGCTTTTCACC...GGCAATGCTGTCGCTGCTTGAGAACATACACACCAAGCCCAGCTTCTCATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS CAA 90 bp ATGCGGACCAGCACTGGGCTCTTACCGGGATCTCGCTCGACCTTCTaGTGCAGGGACCACCTCCACATGCCTTGGTTGCTCTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: MRTSTGLLPGSRSTF*CRDHLHMPWLLCRA
Trigger: TGCCCTGCAGAGCAACCAAGGCATGTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCGAGATCCCGGTAAGAGCCCAGTGCTGGTCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS CCA 72 bp CTGCACAGAGGTGGTTCTTGGTTCGGTGGCAGCTTCTaGGCTCCCCAAGTCCTTCAGCCAACTCCCCACGGT +
Preference number: 6 (lower is better)
Translates to: LHRGGSWFGGSF*APQVLQPTPHG
Trigger: ACCGTGGGGAGTTGGCTGAAGGACTTGGGGAGCCCAGAAGCTGCCACCGAACCAAGAACCACCTCTGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS GCA 72 bp ACTGGGCTCTTACCGGGATCTCGCTCGACCTTCTTGTaGAGGGACCACCTCCACATGCCTTGGTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: TGLLPGSRSTFL*RDHLHMPWLLC
Trigger: GCAGAGCAACCAAGGCATGTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCGAGATCCCGGTAAGAGCCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS CAA 72 bp GGTCCAGCTCCACATCTGAGCTCTCCATGGGAGCCTTaGGGTGTAGGAGGAGGAGGATGTGGTTGTCTCGGG +
Preference number: 6 (lower is better)
Translates to: GPAPHLSSPWEP*GVGGGGCGCLG
Trigger: CCCGAGACAACCACATCCTCCTCCTCCTACACCCAAAGGCTCCCATGGAGAGCTCAGATGTGGAGCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS CAA 72 bp AGCACTGGGCTCTTACCGGGATCTCGCTCGACCTTCTaGTGCAGGGACCACCTCCACATGCCTTGGTTGCTC +
Preference number: 6 (lower is better)
Translates to: STGLLPGSRSTF*CRDHLHMPWLL
Trigger: GAGCAACCAAGGCATGTGGAGGTGGTCCCTGCACAAGAAGGTCGAGCGAGATCCCGGTAAGAGCCCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS TCA 72 bp TCCCTGAGGTCCAGGAACTCACCTTCTCCAGTTCTCTaGGAAGAATGCGGACCAGCACTGGGCTCTTACCGG +
Preference number: 6 (lower is better)
Translates to: SLRSRNSPSPVL*EECGPALGSYR
Trigger: CCGGTAAGAGCCCAGTGCTGGTCCGCATTCTTCTCAGAGAACTGGAGAAGGTGAGTTCCTGGACCTCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611951.4
ENST00000613555.4
CDS CCA 72 bp CTTCTCCAGTTCTCTGAGAAGAATGCGGACCAGCACTaGGCTCTTACCGGGATCTCGCTCGACCTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: LLQFSEKNADQH*ALTGISLDLLV
Trigger: CACAAGAAGGTCGAGCGAGATCCCGGTAAGAGCCCAGTGCTGGTCCGCATTCTTCTCAGAGAACTGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS GCA 72 bp GGTTGTCTCGGGCAGCAGAATAGAGAACAAGGTGGTTaGTTTTCTGCACAGAGGTGGTTCTTGGTTCGGTGG +
Preference number: 6 (lower is better)
Translates to: GCLGQQNREQGG*FSAQRWFLVRW
Trigger: CCACCGAACCAAGAACCACCTCTGTGCAGAAAAGCAACCACCTTGTTCTCTATTCTGCTGCCCGAGACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611951.4
ENST00000613555.4
ENST00000619866.5
CDS GCA 72 bp ACGTACATTACAGTGTGCAGCAAGGGAATGATGACATaGCGGAGGTCCTGGCTTTCCGCCTTCTCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: TYITVCSKGMMT*RRSWLSAFSSS
Trigger: AGAACTGGAGAAGGCGGAAAGCCAGGACCTCCGGCATGTCATCATTCCCTTGCTGCACACTGTAATGTACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619866.5