RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3R3 (Homo sapiens)

Ensembl gene IDs: ENSG00000117461

Ensembl transcript IDs: ENST00000262741.10, ENST00000372006.5, ENST00000420542.5, ENST00000423209.5, ENST00000425892.2, ENST00000488808.1, ENST00000493202.1

Found 605 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGCCAAGACCTGCTCCCAAGTCATGGGCGTAGAGAAGCACCTTaGTACCCTCTCCCCCTCTACACACCAGGCCCAGTGGGTAGTAGA +
Preference number: 1 (lower is better)
Translates to: GGQDLLPSHGRREAP*YPLPLYTPGPVGSR
Trigger: TCTACTACCCACTGGGCCTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTGGGAGCAGGTCTTGGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp GCTACCCTCTCCCCCTCTACACACCAGGCCCAGTGGGTAGTAGACTaGTCCCTATGCCATTTCCACAGGCTCAGGGTCAAGCAAGTCATG +
Preference number: 1 (lower is better)
Translates to: ATLSPSTHQAQWVVD*SLCHFHRLRVKQVM
Trigger: CATGACTTGCTTGACCCTGAGCCTGTGGAAATGGCATAGGGACCAGTCTACTACCCACTGGGCCTGGTGTGTAGAGGGGGAGAGGGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 90 bp TCCCCCTCTACACACCAGGCCCAGTGGGTAGTAGACTGGTCCCTATaGCATTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTG +
Preference number: 1 (lower is better)
Translates to: SPSTHQAQWVVDWSL*HFHRLRVKQVMWQL
Trigger: CAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAATGGCATAGGGACCAGTCTACTACCCACTGGGCCTGGTGTGTAGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 90 bp AGTCCTAGAGAACCTCAGGCCTCTAATGCCCCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTTCACATTCACAAAATCACTTCTTGT +
Preference number: 1 (lower is better)
Translates to: SPREPQASNAPIPAG*CSASPLHIHKITSC
Trigger: ACAAGAAGTGATTTTGTGAATGTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGGGGCATTAGAGGCCTGAGGTTCTCTAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp AGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTaGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: SPSPQASPSVDKDGT*SLPAHRWCLPNKEQ
Trigger: CTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 90 bp GAAACAATGGGCCTAGTACCTGTGTCCAGCCAGCCCCAAGCTGCTTaGATGTCAGTAGCTGGGTTCTCTAGCCAGGGGTATAATGAACCC +
Preference number: 1 (lower is better)
Translates to: ETMGLVPVSSQPQAA*MSVAGFSSQGYNEP
Trigger: GGGTTCATTATACCCCTGGCTAGAGAACCCAGCTACTGACATGCAAGCAGCTTGGGGCTGGCTGGACACAGGTACTAGGCCCATTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp CTTCACTCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTaGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCACAT +
Preference number: 1 (lower is better)
Translates to: LHSAGRLKPHGAEDS*PKIKATGAGGQTAH
Trigger: ATGTGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGAGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTaGTGTGACTCTCACCCTGGACCACAGGGCCCCTGGGTCTGTGAT +
Preference number: 1 (lower is better)
Translates to: LQKLQKPLYGSTCVM*CDSHPGPQGPWVCD
Trigger: ATCACAGACCCAGGGGCCCTGTGGTCCAGGGTGAGAGTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR TCA 90 bp GACCCGTGGAAGACACATTGGCTCTCAAAGCTTCTTCAAAGCACATaGGGCCTAAATAAGTGGAGGTCCCATCAAGGCTTGGAGAGGGAG +
Preference number: 1 (lower is better)
Translates to: DPWKTHWLSKLLQST*GLNKWRSHQGLERE
Trigger: CTCCCTCTCCAAGCCTTGATGGGACCTCCACTTATTTAGGCCTCATGTGCTTTGAAGAAGCTTTGAGAGCCAATGTGTCTTCCACGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp GCAGTCTATCCAGGCCCGAATCATGGCGTGCCATCTAAGGCCAGGTaGAGACAACACTGTTCTGTGATGAAAGCTTCACCTGGAAACAAT +
Preference number: 1 (lower is better)
Translates to: AVYPGPNHGVPSKAR*RQHCSVMKASPGNN
Trigger: ATTGTTTCCAGGTGAAGCTTTCATCACAGAACAGTGTTGTCTCCACCTGGCCTTAGATGGCACGCCATGATTCGGGCCTGGATAGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp TATGCCATTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTaGTCAGAAAAGATACTGTCAAACCTCTCAAATGACCCCTGGGTC +
Preference number: 1 (lower is better)
Translates to: YAISTGSGSSKSCGN*SEKILSNLSNDPWV
Trigger: GACCCAGGGGTCATTTGAGAGGTTTGACAGTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAATGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 90 bp CTGCTGCTCGGCCTCTCCACTTCACATTCACAAAATCACTTCTTGTaGAAAACAAGCAGTCTATGTAGAAAGAATGCCCTCATCGTAGTC +
Preference number: 1 (lower is better)
Translates to: LLLGLSTSHSQNHFL*KTSSLCRKNALIVV
Trigger: GACTACGATGAGGGCATTCTTTCTACATAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGAATGTGAAGTGGAGAGGCCGAGCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 90 bp ACCTGCTTCAGCAGGTTCAACACCAGGTGCAAAGCCATCCAGGTGTaGCCAACAGCAATTAGCTTGGTATTATTCAGTAAAACTTTCAGT +
Preference number: 1 (lower is better)
Translates to: TCFSRFNTRCKAIQV*PTAISLVLFSKTFS
Trigger: ACTGAAAGTTTTACTGAATAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTTGAACCTGCTGAAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR TCA 90 bp CCTACCCTCCCCAACAATTGCACAGCAATGTCTGAACACATCTGGTaGCAAGAACAATTTGTAAAGTGGTCTAGCAACTACATTATGAAC +
Preference number: 1 (lower is better)
Translates to: PTLPNNCTAMSEHIW*QEQFVKWSSNYIMN
Trigger: GTTCATAATGTAGTTGCTAGACCACTTTACAAATTGTTCTTGTCACCAGATGTGTTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp ACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTaGTATTATTCAGTAAAACTTTCAGTTAAGATTTCAATTGACAGT +
Preference number: 1 (lower is better)
Translates to: TPGAKPSRCAQQQLA*YYSVKLSVKISIDS
Trigger: ACTGTCAATTGAAATCTTAACTGAAAGTTTTACTGAATAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 90 bp ATACATTCAACTATGAGTGCCACGTTTTCCCATCAAACATTGGTCTaGCAACAAACTGTTTTGTTGGCTTCTGAACATAATACTTCTTCA +
Preference number: 1 (lower is better)
Translates to: IHSTMSATFSHQTLV*QQTVLLASEHNTSS
Trigger: TGAAGAAGTATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGGCACTCATAGTTGAATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTT +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEPIPAG*CSASPL
Trigger: AAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGCCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTT +
Preference number: 2 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQPIPAG*CSASPL
Trigger: AAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGG...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATATCCCGGCCGGCTGCTaGTCGGCCTCTCCACTTCAC +
Preference number: 2 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHIPAGC*SASPLH
Trigger: GTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGAT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAATACTTGGTCTCTCCCTaGACACCGCTGGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEYLVSP*TPLVSA
Trigger: GGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTA...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAGGCACTAGACTCTCATaGAGGAGGCCAAGACCTGCT +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEGTRLS*RRPRPA
Trigger: AGCAGGTCTTGGCCTCCTTCATGAGAGTCTAGTGCC...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAATGCCCCCACTCCATTTaGCTAGCTTCACTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATECPHSI*LASLSW
Trigger: CCAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCA...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCACACCGCTGGTGTCTaGCCAACAAGGAGCAGACAC +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRHTAGV*PTRSRH
Trigger: GTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTAAGGAGGCCAAGACCTaGTCCCAAGTCATGGGCGTA +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRKEAKT*SQVMGV
Trigger: TACGCCCATGACTTGGGAGCAGGTCTTGGCCTCCTT...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGGGACCACAGGGCCCCTaGGTCTGTGATTTACTGAGG +
Preference number: 2 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQGPQGP*VCDLLR
Trigger: CCTCAGTAAATCACAGACCCAGGGGCCCTGTGGTCC...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTACACACCAGGCCCAGTaGGTAGTAGACTGGTCCCTA +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRTHQAQ*VVDWSL
Trigger: TAGGGACCAGTCTACTACCCACTGGGCCTGGTGTGT...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTACAGCTGACTCACTCTaGGCCTATTATGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRTADSL*AYYGPR
Trigger: CCTGGGACCATAATAGGCTCAGAGTGAGTCAGCTGT...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTT +
Preference number: 2 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAPIPAG*CSASPL
Trigger: AAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGTGCCCCCACTCCATTTaGCTAGCTTCACTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQCPHSI*LASLSW
Trigger: CCAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCA...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTGTCAAACCTCTCAAATaGCCCCTGGGTCTTAGATCC +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRVKPLK*PLGLRS
Trigger: GGATCTAAGACCCAGGGGTCATTTGAGAGGTTTGAC...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGATCCCGGCCGGCTGCTaGTCGGCCTCTCCACTTCAC +
Preference number: 2 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKIPAGC*SASPLH
Trigger: GTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGAT...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATAGGTTCAACACCAGGTaGAAAGCCATCCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHRFNTR*KAIQVC
Trigger: GCACACCTGGATGGCTTTGCACCTGGTGTTGAACCT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAATACTTGGTCTCTCCCTaGACACCGCTGGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEYLVSP*TPLVSA
Trigger: GGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTA...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAAAACTGCAGTTAAGATaGCAAGACAGTCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEKLQLR*QDSPRV
Trigger: GACCCTGGGACTGTCTTGGCATCTTAACTGCAGTTT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAGCAGGTTTGAGCAGTTaGCAGCAGAGGGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEAGLSS*QQRAQA
Trigger: TGCTTGGGCCCTCTGCTGCCAACTGCTCAAACCTGC...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATATGTGTAATGTGGTGTaGCTCTCACCCTGGACCACA +
Preference number: 2 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHMCNVV*LSPWTT
Trigger: TGTGGTCCAGGGTGAGAGTCACACCACATTACACAT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGGTCAAACCTCTCAAATaGCCCCTGGGTCTTAGATCC +
Preference number: 2 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQVKPLK*PLGLRS
Trigger: GGATCTAAGACCCAGGGGTCATTTGAGAGGTTTGAC...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAGGCACTAGACTCTCATaGAGGAGGCCAAGACCTGCT +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEGTRLS*RRPRPA
Trigger: AGCAGGTCTTGGCCTCCTTCATGAGAGTCTAGTGCC...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAACAGCCCCAAGCTGCTTaGATGTCAGTAGCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEQPQAA*MSVAGF
Trigger: GAACCCAGCTACTGACATGCAAGCAGCTTGGGGCTG...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAACACACCAGGCCCAGTaGGTAGTAGACTGGTCCCTA +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSETHQAQ*VVDWSL
Trigger: TAGGGACCAGTCTACTACCCACTGGGCCTGGTGTGT...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAGTATACATTCAACTATaGGTGCCACGTTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEVYIQL*VPRFPI
Trigger: GATGGGAAAACGTGGCACTCATAGTTGAATGTATAC...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTGAGCAGACACATTACTaGATACTACAGCCCTGTATC +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWREQTHY*ILQPCI
Trigger: GATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTC...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAAGCTTAGTATGTCAGTaGAGCGGCATGGCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSESLVCQ*SGMAES
Trigger: GGACTCAGCCATGCCGCTGCACTGACATACTAAGCT...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGGGGGGCAGGAATAGATaGCTGCCCCCACTCCATTTG +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLGGRNR*LPPLHL
Trigger: CAAATGGAGTGGGGGCAGGCATCTATTCCTGCCCCC...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTGGGGGCAGGAATAGATaGCTGCCCCCACTCCATTTG +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSGGRNR*LPPLHL
Trigger: CAAATGGAGTGGGGGCAGGCATCTATTCCTGCCCCC...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGTACTTGGTCTCTCCCTaGACACCGCTGGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLYLVSP*TPLVSA
Trigger: GGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTA...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTGGACCACAGGGCCCCTaGGTCTGTGATTTACTGAGG +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSGPQGP*VCDLLR
Trigger: CCTCAGTAAATCACAGACCCAGGGGCCCTGTGGTCC...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAAATTTTAGTACCAGATaGGAGGGATTCCTTGCACGT +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATENFSTR*EGFLAR
Trigger: ACGTGCAAGGAATCCCTCCCATCTGGTACTAAAATT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCTCCCTGCACACCGCTaGTGTCTGCCCAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGALPAHR*CLPNKE
Trigger: CTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCTCTCAAATGACCCCTaGGTCTTAGATCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRLSNDP*VLDPTK
Trigger: TTTTGTGGGATCTAAGACCCAGGGGTCATTTGAGAG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAGGGCTGGTGAGATGCTaGAGCCTAAATTATGTTGGT +
Preference number: 2 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAGLVRC*SLNYVG
Trigger: ACCAACATAATTTAGGCTTCAGCATCTCACCAGCCC...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCAAAGGAGGGGGAAATaGAGGGAAATTAAACCATGT +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRQRRGK*REIKPC
Trigger: ACATGGTTTAATTTCCCTTCATTTCCCCCTCCTTTG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAGTCAAACCTCTCAAATaGCCCCTGGGTCTTAGATCC +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEVKPLK*PLGLRS
Trigger: GGATCTAAGACCCAGGGGTCATTTGAGAGGTTTGAC...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAGGGGGCAGGAATAGATaGCTGCCCCCACTCCATTTG +
Preference number: 2 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLGGRNR*LPPLHL
Trigger: CAAATGGAGTGGGGGCAGGCATCTATTCCTGCCCCC...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCTAGCTCAGCCAGGGTaGCTGACTGCACAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGALAQPG*LTAQLW
Trigger: CCAAAGCTGTGCAGTCAGGCACCCTGGCTGAGCTAG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGAAGGAGGCCAAGACCTaGTCCCAAGTCATGGGCGTA +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLKEAKT*SQVMGV
Trigger: TACGCCCATGACTTGGGAGCAGGTCTTGGCCTCCTT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATTTTCAATTGACAGTTTaGGGAAGGGATGTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHFQLTV*GRDVLA
Trigger: AGCCAGCACATCCCTTCCCCAAACTGTCAATTGAAA...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACTTAGATTATTTAAATaGAATCCCAAGCCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: RGPKQAPYLDPLVSEATELRLFK*NPKPPH
Trigger: ATGGGGAGGCTTGGGATTTCATTTAAATAATCTAAG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGCAAAGGAGGGGGAAATaGAGGGAAATTAAACCATGT +
Preference number: 2 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQQRRGK*REIKPC
Trigger: ACATGGTTTAATTTCCCTTCATTTCCCCCTCCTTTG...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCACCTGACCACAATCTaGCTCCCCTCCTTAGCAACC +
Preference number: 2 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYHLTTI*LPSLAT
Trigger: GGTTGCTAAGGAGGGGAGTCAGATTGTGGTCAGGTG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGACAGCTGACTCACTCTaGGCCTATTATGGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLTADSL*AYYGPR
Trigger: CCTGGGACCATAATAGGCTCAGAGTGAGTCAGCTGT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCATGTTTACTATTTCTaGAGGGCCTTTAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRHVYYF*RAFKLG
Trigger: CCCAAGTTTAAAGGCCCTGCAGAAATAGTAAACATG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAGCCATCTTCTCTCCCTaGAAAAGCTTCAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEAIFSP*KSFRNH
Trigger: GTGGTTTCTGAAGCTTTTGCAGGGAGAGAAGATGGC...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTAAGGAGGCCAAGACCTaGTCCCAAGTCATGGGCGTA +
Preference number: 2 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAKEAKT*SQVMGV
Trigger: TACGCCCATGACTTGGGAGCAGGTCTTGGCCTCCTT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTGTCAGTGCAGCGGCATaGCTGAGTCCTAGAGAACCT +
Preference number: 2 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAVSAAA*LSPREP
Trigger: AGGTTCTCTAGGACTCAGCCATGCCGCTGCACTGAC...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAAGCACATGTGTAATGTaGTGTGACTCTCACCCTGGA +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSESTCVM*CDSHPG
Trigger: TCCAGGGTGAGAGTCACACCACATTACACATGTGCT...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGTTATGGTCCCAGGATTaGCTCAGAGGCAGCTGGACT +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLLWSQD*LRGSWT
Trigger: AGTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAA...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTAAGTCATGTGGCAACTaGTCAGAAAAGATACTGTCA +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRKSCGN*SEKILS
Trigger: TGACAGTATCTTTTCTGACCAGTTGCCACATGACTT...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 90 bp CGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTaGCCACAAGTGGCTGGAGCTAAAGCAGGTTTGAGCAGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: RHQSHMLEFVRKRGC*PQVAGAKAGLSSWQ
Trigger: CTGCCAACTGCTCAAACCTGCTTTAGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCAAATGAGTGTTGACTaGTGGGTGTGGGGCATGATG +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSQMSVD*WVWGMM
Trigger: CATCATGCCCCACACCCATCAGTCAACACTCATTTG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAATTGGGTTCAAACAGCTaGCTCACTCTGAGCCTATTA +
Preference number: 2 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSELGSNS*LTLSLL
Trigger: TAATAGGCTCAGAGTGAGTCAGCTGTTTGAACCCAA...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGAGCTTAGTATGTCAGTaGAGCGGCATGGCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKSLVCQ*SGMAES
Trigger: GGACTCAGCCATGCCGCTGCACTGACATACTAAGCT...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAGCAGGAATAGATGCCTaGCCCCACTCCATTTGCCTA +
Preference number: 2 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLAGIDA*PHSICL
Trigger: TAGGCAAATGGAGTGGGGGCAGGCATCTATTCCTGC...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGCAGGAATAGATGCCTaGCCCCACTCCATTTGCCTA +
Preference number: 2 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYAGIDA*PHSICL
Trigger: TAGGCAAATGGAGTGGGGGCAGGCATCTATTCCTGC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCTAGCTCAGCCAGGGTaGCTGACTGCACAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLLAQPG*LTAQLW
Trigger: CCAAAGCTGTGCAGTCAGGCACCCTGGCTGAGCTAG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGCCCGAATCATGGCGTaGCATCTAAGGCCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLARIMA*HLRPGG
Trigger: TCCACCTGGCCTTAGATGGCACGCCATGATTCGGGC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGTCTGTTGAGGGTGTCTaGCTAAACAAAACAAAAACC +
Preference number: 2 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQSVEGV*LNKTKT
Trigger: GGTTTTTGTTTTGTTTAGCCAGACACCCTCAACAGA...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAAACAGCCTTCTTCGTaGGGGGAAGAGAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: FPQAQGQASHVATGQKRYKQPSS*GEERLP
Trigger: TGGCAGTCTCTCTTCCCCCCACGAAGAAGGCTGTTT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCATCAAACATTGGTCTaGCAACAAACTGTTTTGTTG +
Preference number: 2 (lower is better)
Translates to: GQISGKDAGSLSRPESWRHQTLV*QQTVLL
Trigger: CAACAAAACAGTTTGTTGCCAGACCAATGTTTGATG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGGACCACAGGGCCCCTaGGTCTGTGATTTACTGAGG +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLGPQGP*VCDLLR
Trigger: CCTCAGTAAATCACAGACCCAGGGGCCCTGTGGTCC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGAAGTCATGTGGCAACTaGTCAGAAAAGATACTGTCA +
Preference number: 2 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQKSCGN*SEKILS
Trigger: TGACAGTATCTTTTCTGACCAGTTGCCACATGACTT...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCAGTGGGTAGTAGACTaGTCCCTATGCCATTTCCAC +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLQWVVD*SLCHFH
Trigger: GTGGAAATGGCATAGGGACCAGTCTACTACCCACTG...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGAGCAGGCCCCCTATCTaGACCCTCTGGTTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLSRPPI*TLWFLR
Trigger: CCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCT...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGCAGGTTTGAGCAGTTaGCAGCAGAGGGCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLAGLSS*QQRAQA
Trigger: TGCTTGGGCCCTCTGCTGCCAACTGCTCAAACCTGC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 90 bp GGGTTCAAACAGCTGACTCACTCTGAGCCTATTATGGTCCCAGGATaGGCTCAGAGGCAGCTGGACTCTATTTGTCAAATGAGTGTTGAC +
Preference number: 2 (lower is better)
Translates to: GFKQLTHSEPIMVPG*AQRQLDSICQMSVD
Trigger: GTCAACACTCATTTGACAAATAGAGTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAATAGGCTCAGAGTGAGTCAGCTGTTTGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 90 bp ATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCCCTCTGCCTCATaGAAACTGCAGTTAAGATGCCAAGACAGTCCCAGGGTCCAGATC +
Preference number: 2 (lower is better)
Translates to: IMNPSDLGLSLPSAS*KLQLRCQDSPRVQI
Trigger: GATCTGGACCCTGGGACTGTCTTGGCATCTTAACTGCAGTTTCAATGAGGCAGAGGGCAAAGAGAGACCAAGATCAGAGGGGTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCTTAGATTATTTAAATaGAATCCCAAGCCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHLRLFK*NPKPPH
Trigger: ATGGGGAGGCTTGGGATTTCATTTAAATAATCTAAG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCACCTGACCACAATCTaGCTCCCCTCCTTAGCAACC +
Preference number: 2 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPHLTTI*LPSLAT
Trigger: GGTTGCTAAGGAGGGGAGTCAGATTGTGGTCAGGTG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAATGTGTAATGTGGTGTaGCTCTCACCCTGGACCACA +
Preference number: 2 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLMCNVV*LSPWTT
Trigger: TGTGGTCCAGGGTGAGAGTCACACCACATTACACAT...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGAAAGCCATCCAGGTGTaGCCAACAGCAATTAGCTTG +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLKAIQV*PTAISL
Trigger: CAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGTCAGTGCAGCGGCATaGCTGAGTCCTAGAGAACCT +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLVSAAA*LSPREP
Trigger: AGGTTCTCTAGGACTCAGCCATGCCGCTGCACTGAC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTACTCTGAGCCTATTATaGTCCCAGGATTGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSTLSLL*SQDWLR
Trigger: TCTGAGCCAATCCTGGGACCATAATAGGCTCAGAGT...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGACTCTGAGCCTATTATaGTCCCAGGATTGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLTLSLL*SQDWLR
Trigger: TCTGAGCCAATCCTGGGACCATAATAGGCTCAGAGT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCTGACTGCACAGCTTTaGGTTCAAACAGCTGACTCA +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSLTAQL*VQTADS
Trigger: TGAGTCAGCTGTTTGAACCCAAAGCTGTGCAGTCAG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGATAAAGATGGTACTTaGTCTCTCCCTGCACACCGC +
Preference number: 2 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYDKDGT*SLPAHR
Trigger: GCGGTGTGCAGGGAGAGACCAAGTACCATCTTTATC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCAGTGGGTAGTAGACTaGTCCCTATGCCATTTCCAC +
Preference number: 2 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYQWVVD*SLCHFH
Trigger: GTGGAAATGGCATAGGGACCAGTCTACTACCCACTG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCCATCTAAGGCCAGGTaGAGACAACACTGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAPSKAR*RQHCSV
Trigger: CACAGAACAGTGTTGTCTCCACCTGGCCTTAGATGG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACACCTGACCACAATCTaGCTCCCCTCCTTAGCAACC +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPHLTTI*LPSLAT
Trigger: GGTTGCTAAGGAGGGGAGTCAGATTGTGGTCAGGTG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGTTGGGTTCAAACAGCTaGCTCACTCTGAGCCTATTA +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLLGSNS*LTLSLL
Trigger: TAATAGGCTCAGAGTGAGTCAGCTGTTTGAACCCAA...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTATGTCTCACCCAATCCTaGAACTGCAGTGTAACCAAG +
Preference number: 2 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLCLTQS*NCSVTK
Trigger: CTTGGTTACACTGCAGTTTCAGGATTGGGTGAGACA...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCAGCTTAGTATGTCAGTaGAGCGGCATGGCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSSLVCQ*SGMAES
Trigger: GGACTCAGCCATGCCGCTGCACTGACATACTAAGCT...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAGCCAGGGTGCCTGACTaGACAGCTTTGGGTTCAAAC +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPARVPD*TALGSN
Trigger: GTTTGAACCCAAAGCTGTGCAGTCAGGCACCCTGGC...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGAGGTTCAACACCAGGTaGAAAGCCATCCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLRFNTR*KAIQVC
Trigger: GCACACCTGGATGGCTTTGCACCTGGTGTTGAACCT...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAAAACTGCAGTTAAGATaGCAAGACAGTCCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: YCITGASWPDCPLLGKVLKLQLR*QDSPRV
Trigger: GACCCTGGGACTGTCTTGGCATCTTAACTGCAGTTT...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGTCAGTGCAGCGGCATaGCTGAGTCCTAGAGAACCT +
Preference number: 2 (lower is better)
Translates to: QVTAPKSHAGICKETRLFVSAAA*LSPREP
Trigger: AGGTTCTCTAGGACTCAGCCATGCCGCTGCACTGAC...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACAAACAGCCTTCTTCGTaGGGGGAAGAGAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDKQPSS*GEERLP
Trigger: TGGCAGTCTCTCTTCCCCCCACGAAGAAGGCTGTTT...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCATTTCCCATCAAACATTaGTCTGGCAACAAACTGTTT +
Preference number: 2 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAFPIKH*SGNKLF
Trigger: AAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAA...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCTCTCAAATGACCCCTaGGTCTTAGATCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLLSNDP*VLDPTK
Trigger: TTTTGTGGGATCTAAGACCCAGGGGTCATTTGAGAG...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 90 bp CGGCTGCTGCTCGGCCTCTCCACTTCACATTCACAAAATCACTTCTaGTGCAAAACAAGCAGTCTATGTAGAAAGAATGCCCTCATCGTA +
Preference number: 2 (lower is better)
Translates to: RLLLGLSTSHSQNHF*CKTSSLCRKNALIV
Trigger: TACGATGAGGGCATTCTTTCTACATAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGAATGTGAAGTGGAGAGGCCGAGCAGCAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTGTATACATTCAACTATaGGTGCCACGTTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSVYIQL*VPRFPI
Trigger: GATGGGAAAACGTGGCACTCATAGTTGAATGTATAC...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCAAAGGAGGGGGAAATaGAGGGAAATTAAACCATGT +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLQRRGK*REIKPC
Trigger: ACATGGTTTAATTTCCCTTCATTTCCCCCTCCTTTG...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAAAACAGCCTTCTTCGTaGGGGGAAGAGAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPKQPSS*GEERLP
Trigger: TGGCAGTCTCTCTTCCCCCCACGAAGAAGGCTGTTT...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCATTATGGTCCCAGGATTaGCTCAGAGGCAGCTGGACT +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPLWSQD*LRGSWT
Trigger: AGTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAA...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCTCTCAAATGACCCCTaGGTCTTAGATCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYLSNDP*VLDPTK
Trigger: TTTTGTGGGATCTAAGACCCAGGGGTCATTTGAGAG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 90 bp AGTGCCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTaGTTGGCTTCTGAACATAATACTTCTTCAGAGGGAGGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: SATFSHQTLVWQQTV*LASEHNTSSEGGAG
Trigger: ACCAGCCCCTCCCTCTGAAGAAGTATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACAAATGAGTGTTGACTaGTGGGTGTGGGGCATGATG +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPQMSVD*WVWGMM
Trigger: CATCATGCCCCACACCCATCAGTCAACACTCATTTG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGACATTCAACTATGAGTaGCACGTTTTCCCATCAAAC +
Preference number: 2 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLTFNYE*HVFPSN
Trigger: GTTTGATGGGAAAACGTGGCACTCATAGTTGAATGT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCATGTTTACTATTTCTaGAGGGCCTTTAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSHVYYF*RAFKLG
Trigger: CCCAAGTTTAAAGGCCCTGCAGAAATAGTAAACATG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGCCATCTTCTCTCCCTaGAAAAGCTTCAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: SQVTAPKSHAGICKETRLAIFSP*KSFRNH
Trigger: GTGGTTTCTGAAGCTTTTGCAGGGAGAGAAGATGGC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTAGCACATGTGTAATGTaGTGTGACTCTCACCCTGGA +
Preference number: 2 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPSTCVM*CDSHPG
Trigger: TCCAGGGTGAGAGTCACACCACATTACACATGTGCT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGGGCTGGTGAGATGCTaGAGCCTAAATTATGTTGGT +
Preference number: 2 (lower is better)
Translates to: QVTAPKSHAGICKETRLFGLVRC*SLNYVG
Trigger: ACCAACATAATTTAGGCTTCAGCATCTCACCAGCCC...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTTGTCAAATGAGTGTTaGCTGATGGGTGTGGGGCAT +
Preference number: 2 (lower is better)
Translates to: QVTAPKSHAGICKETRLFLSNEC*LMGVGH
Trigger: ATGCCCCACACCCATCAGTCAACACTCATTTGACAA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAGGCACTAGACTCTCATaGAGGAGGCCAAGACCTGCT +
Preference number: 2 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTGTRLS*RRPRPA
Trigger: AGCAGGTCTTGGCCTCCTTCATGAGAGTCTAGTGCC...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAGCCATCTTCTCTCCCTaGAAAAGCTTCAGAAACCAC +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPAIFSP*KSFRNH
Trigger: GTGGTTTCTGAAGCTTTTGCAGGGAGAGAAGATGGC...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTAAAGCCATCCAGGTGTaGCCAACAGCAATTAGCTTG +
Preference number: 2 (lower is better)
Translates to: QVTAPKSHAGICKETRLFKAIQV*PTAISL
Trigger: CAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTT...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTTTAGAAAACAGGAATTaGCCAGGTGCAATTCTCAGT +
Preference number: 2 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGALENRN*PGAILS
Trigger: ACTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAA...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCATCAAACATTGGTCTaGCAACAAACTGTTTTGTTG +
Preference number: 2 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSHQTLV*QQTVLL
Trigger: CAACAAAACAGTTTGTTGCCAGACCAATGTTTGATG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTTTCAATTGACAGTTTaGGGAAGGGATGTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: QVTAPKSHAGICKETRLFFQLTV*GRDVLA
Trigger: AGCCAGCACATCCCTTCCCCAAACTGTCAATTGAAA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAGTATACATTCAACTATaGGTGCCACGTTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPVYIQL*VPRFPI
Trigger: GATGGGAAAACGTGGCACTCATAGTTGAATGTATAC...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAATGTGTAATGTGGTGTaGCTCTCACCCTGGACCACA +
Preference number: 2 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTMCNVV*LSPWTT
Trigger: TGTGGTCCAGGGTGAGAGTCACACCACATTACACAT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACACAAATGAGTGTTGACTaGTGGGTGTGGGGCATGATG +
Preference number: 2 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTQMSVD*WVWGMM
Trigger: CATCATGCCCCACACCCATCAGTCAACACTCATTTG...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCACATTCAACTATGAGTaGCACGTTTTCCCATCAAAC +
Preference number: 2 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSTFNYE*HVFPSN
Trigger: GTTTGATGGGAAAACGTGGCACTCATAGTTGAATGT...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGCTAAAAGCACTGCATTaGACCTTTTCTTTACTCATA +
Preference number: 2 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKLKALH*TFSLLI
Trigger: TATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAG...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCTAAAAGCACTGCATTaGACCTTTTCTTTACTCATA +
Preference number: 2 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYLKALH*TFSLLI
Trigger: TATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCTCTGTTGAGGGTGTCTaGCTAAACAAAACAAAAACC +
Preference number: 2 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSSVEGV*LNKTKT
Trigger: GGTTTTTGTTTTGTTTAGCCAGACACCCTCAACAGA...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR TCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCCTTAGATTATTTAAATaGAATCCCAAGCCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSLRLFK*NPKPPH
Trigger: ATGGGGAGGCTTGGGATTTCATTTAAATAATCTAAG...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTACATTCAACTATGAGTaGCACGTTTTCCCATCAAAC +
Preference number: 2 (lower is better)
Translates to: QVTAPKSHAGICKETRLFTFNYE*HVFPSN
Trigger: GTTTGATGGGAAAACGTGGCACTCATAGTTGAATGT...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAAGCACATGTGTAATGTaGTGTGACTCTCACCCTGGA +
Preference number: 2 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTSTCVM*CDSHPG
Trigger: TCCAGGGTGAGAGTCACACCACATTACACATGTGCT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTTTCCCATCAAACATTaGTCTGGCAACAAACTGTTT +
Preference number: 2 (lower is better)
Translates to: QVTAPKSHAGICKETRLFFPIKH*SGNKLF
Trigger: AAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR GCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACTAAAAGCACTGCATTaGACCTTTTCTTTACTCATA +
Preference number: 2 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPLKALH*TFSLLI
Trigger: TATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAAATTTTAGTACCAGATaGGAGGGATTCCTTGCACGT +
Preference number: 2 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTNFSTR*EGFLAR
Trigger: ACGTGCAAGGAATCCCTCCCATCTGGTACTAAAATT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 90 bp AGAAGTATACATTCAACTATGAGTGCCACGTTTTCCCATCAAACATaGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGAACATAATACT +
Preference number: 2 (lower is better)
Translates to: RSIHSTMSATFSHQT*VWQQTVLLASEHNT
Trigger: AGTATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGGCACTCATAGTTGAATGTATACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACTGCCCCCACTCCATTaGCCTAGCTTCACTCAGCTG +
Preference number: 3 (lower is better)
Translates to: RGPKQAPYLDPLVSEATELPPLH*PSFTQL
Trigger: CAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCAG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACCAGCCCCAAGCTGCTaGCATGTCAGTAGCTGGGTT +
Preference number: 3 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEPAPSC*HVSSWV
Trigger: AACCCAGCTACTGACATGCAAGCAGCTTGGGGCTGG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 72 bp CCTCAGGCCTCTAATGCCCCCATCCCGGCCGGCTGCTaGTCGGCCTCTCCACTTCACATTCACAAAATCACT +
Preference number: 3 (lower is better)
Translates to: PQASNAPIPAGC*SASPLHIHKIT
Trigger: AGTGATTTTGTGAATGTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGGGGCATTAGAGGCCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 72 bp GAACCTCAGGCCTCTAATGCCCCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTTCACATTCACAAAATC +
Preference number: 3 (lower is better)
Translates to: EPQASNAPIPAG*CSASPLHIHKI
Trigger: GATTTTGTGAATGTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGGGGCATTAGAGGCCTGAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCTGCCCCCACTCCATTaGCCTAGCTTCACTCAGCTG +
Preference number: 3 (lower is better)
Translates to: GQISGKDAGSLSRPESWRLPPLH*PSFTQL
Trigger: CAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCAG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 72 bp CTTGCTACCCTCTCCCCCTCTACACACCAGGCCCAGTaGGTAGTAGACTGGTCCCTATGCCATTTCCACAGG +
Preference number: 3 (lower is better)
Translates to: LATLSPSTHQAQ*VVDWSLCHFHR
Trigger: CCTGTGGAAATGGCATAGGGACCAGTCTACTACCCACTGGGCCTGGTGTGTAGAGGGGGAGAGGGTAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTTCCTTGCACGTAATCTaGAGCATCCACCTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: GQISGKDAGSLSRPESWRSLHVI*SIHLLQ
Trigger: CTGAAGCAGGTGGATGCTCAAGATTACGTGCAAGGA...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 72 bp ACACACCAGGCCCAGTGGGTAGTAGACTGGTCCCTATaGCATTTCCACAGGCTCAGGGTCAAGCAAGTCATG +
Preference number: 3 (lower is better)
Translates to: THQAQWVVDWSL*HFHRLRVKQVM
Trigger: CATGACTTGCTTGACCCTGAGCCTGTGGAAATGGCATAGGGACCAGTCTACTACCCACTGGGCCTGGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 72 bp GCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTaGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: AGRLKPHGAEDS*PKIKATGAGGQ
Trigger: CTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 72 bp CCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTaGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAAC +
Preference number: 3 (lower is better)
Translates to: PQASPSVDKDGT*SLPAHRWCLPN
Trigger: GTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTATTTCAATTGACAGTTaGGGGAAGGGATGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: GQISGKDAGSLSRPESWRISIDS*GKGCAG
Trigger: GCCAGCACATCCCTTCCCCAAACTGTCAATTGAAAT...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTTTGCCCTCTGCCTCATaGAAACTGCAGTTAAGATGC +
Preference number: 3 (lower is better)
Translates to: GQISGKDAGSLSRPESWRLPSAS*KLQLRC
Trigger: GCATCTTAACTGCAGTTTCAATGAGGCAGAGGGCAA...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGATTATGGTCCCAGGATaGGCTCAGAGGCAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLIMVPG*AQRQLD
Trigger: GTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAAT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAATCCTTGCACGTAATCTaGAGCATCCACCTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSESLHVI*SIHLLQ
Trigger: CTGAAGCAGGTGGATGCTCAAGATTACGTGCAAGGA...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAATTATGGTCCCAGGATaGGCTCAGAGGCAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLIMVPG*AQRQLD
Trigger: GTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAAT...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 72 bp ATGGTACTTGGTCTCTCCCTGCACACCGCTGGTGTCTaGCCAACAAGGAGCAGACACATTACTGAATACTAC +
Preference number: 3 (lower is better)
Translates to: MVLGLSLHTAGV*PTRSRHITEYY
Trigger: GTAGTATTCAGTAATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 72 bp TCTTTGCCCTCTGCCTCATTGAAACTGCAGTTAAGATaGCAAGACAGTCCCAGGGTCCAGATCATGGGACAG +
Preference number: 3 (lower is better)
Translates to: SLPSASLKLQLR*QDSPRVQIMGQ
Trigger: CTGTCCCATGATCTGGACCCTGGGACTGTCTTGGCATCTTAACTGCAGTTTCAATGAGGCAGAGGGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTTGGCAACAAACTGTTTaGTTGGCTTCTGAACATAAT +
Preference number: 3 (lower is better)
Translates to: GQISGKDAGSLSRPESWRWQQTV*LASEHN
Trigger: ATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCA...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATTCACAAAATCACTTCTaGTGCAAAACAAGCAGTCTA +
Preference number: 3 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHSQNHF*CKTSSL
Trigger: TAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGA...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATTCTAAAAGCACTGCATaGCACCTTTTCTTTACTCAT +
Preference number: 3 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHSKSTA*HLFFTH
Trigger: ATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAGA...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGGAGCTAAAGCAGGTTaGAGCAGTTGGCAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: SQVTAPKSHAGICKETRLGAKAG*SSWQQR
Trigger: CCTCTGCTGCCAACTGCTCAAACCTGCTTTAGCTCC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAATTTTCCCATCAAACATaGGTCTGGCAACAAACTGTT +
Preference number: 3 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEFSHQT*VWQQTV
Trigger: AACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAA...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCATCTAAAAGCACTGCATaGCACCTTTTCTTTACTCAT +
Preference number: 3 (lower is better)
Translates to: AEDSWPKIKATGAGGQTASKSTA*HLFFTH
Trigger: ATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAGA...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATATTTCAATTGACAGTTaGGGGAAGGGATGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYISIDS*GKGCAG
Trigger: GCCAGCACATCCCTTCCCCAAACTGTCAATTGAAAT...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAGATCTTGGTCTCTCTTaGCCCTCTGCCTCATTGAAA +
Preference number: 3 (lower is better)
Translates to: YCITGASWPDCPLLGKVLDLGLS*PSASLK
Trigger: TTTCAATGAGGCAGAGGGCAAAGAGAGACCAAGATC...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCTTAGAAAACAGGAATaGCCCAGGTGCAATTCTCAG +
Preference number: 3 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYLRKQE*PRCNSQ
Trigger: CTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAAG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGATGGGAGGGATTCCTaGCACGTAATCTTGAGCATC +
Preference number: 3 (lower is better)
Translates to: QVTAPKSHAGICKETRLFDGRDS*HVILSI
Trigger: GATGCTCAAGATTACGTGCAAGGAATCCCTCCCATC...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGATCTTGGTCTCTCTTaGCCCTCTGCCTCATTGAAA +
Preference number: 3 (lower is better)
Translates to: SQVTAPKSHAGICKETRLDLGLS*PSASLK
Trigger: TTTCAATGAGGCAGAGGGCAAAGAGAGACCAAGATC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 72 bp AGCAGGTTCAACACCAGGTGCAAAGCCATCCAGGTGTaGCCAACAGCAATTAGCTTGGTATTATTCAGTAAA +
Preference number: 3 (lower is better)
Translates to: SRFNTRCKAIQV*PTAISLVLFSK
Trigger: TTTACTGAATAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTTGAACCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR GCA 72 bp AGCAGAGACCACCTTAGAAAACAGGAATTGCCCAGGTaGAATTCTCAGTTTAAGAGAACACATGGGGCTGAT +
Preference number: 3 (lower is better)
Translates to: SRDHLRKQELPR*NSQFKRTHGAD
Trigger: ATCAGCCCCATGTGTTCTCTTAAACTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAAGGTGGTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTTGGCAACAAACTGTTTaGTTGGCTTCTGAACATAAT +
Preference number: 3 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSWQQTV*LASEHN
Trigger: ATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCA...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTTTTCCCATCAAACATaGGTCTGGCAACAAACTGTT +
Preference number: 3 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYFSHQT*VWQQTV
Trigger: AACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAA...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAACTACACGAATTTTCTaGGACACATCAAAGACAACA +
Preference number: 3 (lower is better)
Translates to: YCITGASWPDCPLLGKVLTTRIF*DTSKTT
Trigger: TGTTGTCTTTGATGTGTCCAAGAAAATTCGTGTAGT...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 72 bp TTATTGCAATGTCTTTATTGCATTACTGGAGCAAGTTaGCCAGACTGTCCCCTCTTGGGGAAGGTATTAAAC +
Preference number: 3 (lower is better)
Translates to: LLQCLYCITGAS*PDCPLLGKVLN
Trigger: GTTTAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAAGACATTGCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAGATGGGAGGGATTCCTaGCACGTAATCTTGAGCATC +
Preference number: 3 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTDGRDS*HVILSI
Trigger: GATGCTCAAGATTACGTGCAAGGAATCCCTCCCATC...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR TCA 72 bp CCCAACAATTGCACAGCAATGTCTGAACACATCTGGTaGCAAGAACAATTTGTAAAGTGGTCTAGCAACTAC +
Preference number: 3 (lower is better)
Translates to: PNNCTAMSEHIW*QEQFVKWSSNY
Trigger: GTAGTTGCTAGACCACTTTACAAATTGTTCTTGTCACCAGATGTGTTCAGACATTGCTGTGCAATTGTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTCACAAAATCACTTCTaGTGCAAAACAAGCAGTCTA +
Preference number: 3 (lower is better)
Translates to: SQVTAPKSHAGICKETRLSQNHF*CKTSSL
Trigger: TAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGA...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTCACAAAATCACTTCTaGTGCAAAACAAGCAGTCTA +
Preference number: 3 (lower is better)
Translates to: QVTAPKSHAGICKETRLFSQNHF*CKTSSL
Trigger: TAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR-3UTR CAA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTCTAAAAGCACTGCATaGCACCTTTTCTTTACTCAT +
Preference number: 3 (lower is better)
Translates to: QVTAPKSHAGICKETRLFSKSTA*HLFFTH
Trigger: ATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAGA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR TCA 72 bp TGTTCAAGTTTTGGTACAGAAGTATACATTCAACTATaGGTGCCACGTTTTCCCATCAAACATTGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: CSSFGTEVYIQL*VPRFPIKHWSG
Trigger: GCCAGACCAATGTTTGATGGGAAAACGTGGCACTCATAGTTGAATGTATACTTCTGTACCAAAACTTGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CCA 72 bp ACTATGAGTGCCACGTTTTCCCATCAAACATTGGTCTaGCAACAAACTGTTTTGTTGGCTTCTGAACATAAT +
Preference number: 3 (lower is better)
Translates to: TMSATFSHQTLV*QQTVLLASEHN
Trigger: ATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGGCACTCATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRPIPAG*CSASPL
Trigger: AAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCATGTACATCGCGCCGCTaGGGCGCCACCCAACCGCGC +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTACTSRR*GATQPR
Trigger: GCGCGGTTGGGTGGCGCCTCAGCGGCGCGATGTACA...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372006.5
CDS-3UTR GCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCACTCCAGGAGTCAGTaGCGGGAGCACGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRHSRSQ*REHASQ
Trigger: CTGGCTCGCGTGCTCCCGGCACTGACTCCTGGAGTG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS-3UTR CCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGTCAGCTCGGCTTGTCTaGGCGCTCCCGCCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQSARLV*ALPPGC
Trigger: ACACCCCGGCGGGAGCGCCCAGACAAGCCGAGCTGA...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCACCGCAGCCTCGGGAATaGGGCCGGCCGGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAPQPRE*GRPEKS
Trigger: GGACTTCTCCGGCCGGCCCCATTCCCGAGGCTGCGG...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACAGGTTGTAGGGCTCTaGAAAGCCATAGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEQVVGL*KAIAPS
Trigger: GCTCGGGGCTATGGCTTTGCAGAGCCCTACAACCTG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACACACCGCTGGTGTCTaGCCAACAAGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEHTAGV*PTRSRH
Trigger: GTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACAGCCAGCCCCAAGCTaGTTGCATGTCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEQPAPS*LHVSSW
Trigger: CCAGCTACTGACATGCAAGCAGCTTGGGGCTGGCTG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAAAGGGGGCTGGAGATTaGGTTCAAGTTTCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEKGAGD*VQVSGS
Trigger: GGACCCCGAAACTTGAACGCAATCTCCAGCCCCCTT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCTCCCTGCACACCGCTaGTGTCTGCCCAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHLPAHR*CLPNKE
Trigger: CTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCACCTCCCTCCAGTCTaGGTCATCGCGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHHLPPV*VIAVHT
Trigger: AGTATGGACCGCGATGACGCAGACTGGAGGGAGGTG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACATAGCCCCGAGCAGTaGTGTAGATCACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEHSPEQ*CRSHSA
Trigger: AGCACTGTGTGATCTACAGCACTGCTCGGGGCTATG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGCTAGCTCAGCCAGGGTaGCTGACTGCACAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQLAQPG*LTAQLW
Trigger: CCAAAGCTGTGCAGTCAGGCACCCTGGCTGAGCTAG...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGAGGGAGTCGTTGTGCTaGACCAAGGATGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQRESLC*TKDVCW
Trigger: CCAGCAGACATCCTTGGTTCAGCACAACGACTCCCT...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACCCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYPIPAG*CSASPL
Trigger: AAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGG...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAGGACCACAGGGCCCCTaGGTCTGTGATTTACTGAGG +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAGPQGP*VCDLLR
Trigger: CCTCAGTAAATCACAGACCCAGGGGCCCTGTGGTCC...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAGATAAAGATGGTACTTaGTCTCTCCCTGCACACCGC +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEDKDGT*SLPAHR
Trigger: GCGGTGTGCAGGGAGAGACCAAGTACCATCTTTATC...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACCATCTAAGGCCAGGTaGAGACAACACTGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEPSKAR*RQHCSV
Trigger: CACAGAACAGTGTTGTCTCCACCTGGCCTTAGATGG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 72 bp GATGGGGGCAGGAATAGATGCCTGCCCCCACTCCATTaGCCTAGCTTCACTCAGCTGGAAGGCTTAAGCCAC +
Preference number: 4 (lower is better)
Translates to: DGGRNRCLPPLH*PSFTQLEGLSH
Trigger: GTGGCTTAAGCCTTCCAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCAGGCATCTATTCCTGCCCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCATAGCCCCGAGCAGTaGTGTAGATCACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHHSPEQ*CRSHSA
Trigger: AGCACTGTGTGATCTACAGCACTGCTCGGGGCTATG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAAAAGCCATCCAGGTGTaGCCAACAGCAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEKAIQV*PTAISL
Trigger: CAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAACCCTCCCCAACAATTaGACAGCAATGTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATETLPNN*TAMSEH
Trigger: GTGTTCAGACATTGCTGTGCAATTGTTGGGGAGGGT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCGGATCTTTCGCAGCTaGATCAGGTCAGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRRIFRS*IRSGLM
Trigger: CATCAAACCTGACCTGATCCAGCTGCGAAAGATCCG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGTTATGGTCCCAGGATTaGCTCAGAGGCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQLWSQD*LRGSWT
Trigger: AGTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAA...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAACTCTGAGCCTATTATaGTCCCAGGATTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATETLSLL*SQDWLR
Trigger: TCTGAGCCAATCCTGGGACCATAATAGGCTCAGAGT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCAGTGGGTAGTAGACTaGTCCCTATGCCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRQWVVD*SLCHFH
Trigger: GTGGAAATGGCATAGGGACCAGTCTACTACCCACTG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCCATCTAAGGCCAGGTaGAGACAACACTGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRPSKAR*RQHCSV
Trigger: CACAGAACAGTGTTGTCTCCACCTGGCCTTAGATGG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTTCCATTTGGAACTGCTaGAGTCATTGGCTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRSIWNC*SHWLRW
Trigger: CCACCTAAGCCAATGACTTCAGCAGTTCCAAATGGA...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGAGCCATACAAGGTGTTaGTCTCGGATCTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQSHTRC*SRIFRS
Trigger: GCTGCGAAAGATCCGAGATCAACACCTTGTATGGCT...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGCAAATGAGTGTTGACTaGTGGGTGTGGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQQMSVD*WVWGMM
Trigger: CATCATGCCCCACACCCATCAGTCAACACTCATTTG...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTTGTCTCACCCAATCCTaGAACTGCAGTGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRCLTQS*NCSVTK
Trigger: CTTGGTTACACTGCAGTTTCAGGATTGGGTGAGACA...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATGTCAAACCTCTCAAATaGCCCCTGGGTCTTAGATCC +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHVKPLK*PLGLRS
Trigger: GGATCTAAGACCCAGGGGTCATTTGAGAGGTTTGAC...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTATCTCGGAACCGAAGCTaGCGCAGCCTCGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLSRNRS*RSLGNG
Trigger: CCCATTCCCGAGGCTGCGGCAGCTTCGGTTCCGAGA...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGGGGGTCCCACTGGTCTaGAGAGAGCGAATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKGVPLV*RERIPQ
Trigger: CTGGGGGATTCGCTCTCTGCAGACCAGTGGGACCCC...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR GCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCCCCCAGTACCATTCTaGATCCTGAAGAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRPPVPF*ILKRNR
Trigger: TCTGTTTCTCTTCAGGATGCAGAATGGTACTGGGGG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAAAGCGAGGGCATCTGTaGATGAACAGGGTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAKRGHL*MNRVGK
Trigger: CTTGCCTACCCTGTTCATGCACAGATGCCCTCGCTT...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAAGGTTCAACACCAGGTaGAAAGCCATCCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTARFNTR*KAIQVC
Trigger: GCACACCTGGATGGCTTTGCACCTGGTGTTGAACCT...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTACCCTCCCCAACAATTaGACAGCAATGTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRTLPNN*TAMSEH
Trigger: GTGTTCAGACATTGCTGTGCAATTGTTGGGGAGGGT...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATGGTCCCATCAAGGCTTaGAGAGGGAGTGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHGPIKA*RGSESV
Trigger: AACACTTTCACTCCCTCTCCAAGCCTTGATGGGACC...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCACCTATCTGGACCCTCTaGTTTCTGAGGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAPIWTL*FLRPLK
Trigger: CTTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGG...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGTCCCTGCATTTTTGTTaGGGCATCTCGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQSLHFC*GISDQE
Trigger: TTCTTGGTCCGAGATGCCTCAACAAAAATGCAGGGA...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGATCCCGGCCGGCTGCTaGTCGGCCTCTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLIPAGC*SASPLH
Trigger: GTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGAT...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTATCCCGGCCGGCTGCTaGTCGGCCTCTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPIPAGC*SASPLH
Trigger: GTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGAT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACCCATCCCGGCCGGCTaGTGCTCGGCCTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPPIPAG*CSASPL
Trigger: AAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGATGGG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTTACTTGGTCTCTCCCTaGACACCGCTGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSYLVSP*TPLVSA
Trigger: GGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTA...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATAAACTGCAGTTAAGATaGCAAGACAGTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHKLQLR*QDSPRV
Trigger: GACCCTGGGACTGTCTTGGCATCTTAACTGCAGTTT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCAAGAAGGTCCCATCTaGCATATCCCGCAATTTGTC +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHQEGPI*HIPQFV
Trigger: GACAAATTGCGGGATATGCCAGATGGGACCTTCTTG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAGCTTCACATCAAGTTTaGGATTGTACTGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEASHQV*DCTEQE
Trigger: CTCTTGCTCAGTACAATCCCAAACTTGATGTGAAGC...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTACTCCCTGCACACCGCTaGTGTCTGCCCAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLLPAHR*CLPNKE
Trigger: CTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAG...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACGTACGATCCGGGCGCTaGCCGCACTCCAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDVRSGR*PHSRSQ
Trigger: CTGACTCCTGGAGTGCGGCCAGCGCCCGGATCGTAC...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGCGCATTTTGCTATCATaGATCTCACCCAGACGTGAT +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQRILLS*ISPRRD
Trigger: ATCACGTCTGGGTGAGATTCATGATAGCAAAATGCG...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGCTGCTTGTACTCGATTaGTATCCTCAACAAACCAGG +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQLLVLD*YPQQTR
Trigger: CCTGGTTTGTTGAGGATATCAATCGAGTACAAGCAG...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCTGCTTGTACTCGATTaGTATCCTCAACAAACCAGG +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHLLVLD*YPQQTR
Trigger: CCTGGTTTGTTGAGGATATCAATCGAGTACAAGCAG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGCAGGTTGTAGGGCTCTaGAAAGCCATAGCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKQVVGL*KAIAPS
Trigger: GCTCGGGGCTATGGCTTTGCAGAGCCCTACAACCTG...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAACATTCAACTATGAGTaGCACGTTTTCCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATETFNYE*HVFPSN
Trigger: GTTTGATGGGAAAACGTGGCACTCATAGTTGAATGT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAAAAGCCATCCAGGTGTaGCCAACAGCAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAKAIQV*PTAISL
Trigger: CAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTT...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGCCCGAATCATGGCGTaGCATCTAAGGCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYARIMA*HLRPGG
Trigger: TCCACCTGGCCTTAGATGGCACGCCATGATTCGGGC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGGCCCGAATCATGGCGTaGCATCTAAGGCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKARIMA*HLRPGG
Trigger: TCCACCTGGCCTTAGATGGCACGCCATGATTCGGGC...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAGGACCACAGGGCCCCTaGGTCTGTGATTTACTGAGG +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLGPQGP*VCDLLR
Trigger: CCTCAGTAAATCACAGACCCAGGGGCCCTGTGGTCC...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGGGACCACAGGGCCCCTaGGTCTGTGATTTACTGAGG +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKGPQGP*VCDLLR
Trigger: CCTCAGTAAATCACAGACCCAGGGGCCCTGTGGTCC...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAAAGTCATGTGGCAACTaGTCAGAAAAGATACTGTCA +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEKSCGN*SEKILS
Trigger: TGACAGTATCTTTTCTGACCAGTTGCCACATGACTT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTACACACCAGGCCCAGTaGGTAGTAGACTGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSTHQAQ*VVDWSL
Trigger: TAGGGACCAGTCTACTACCCACTGGGCCTGGTGTGT...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAGCAGGCCCCCTATCTaGACCCTCTGGTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYSRPPI*TLWFLR
Trigger: CCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAAGCAGGCCCCCTATCTaGACCCTCTGGTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLSRPPI*TLWFLR
Trigger: CCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCT...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTGCAGGTTTGAGCAGTTaGCAGCAGAGGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAAGLSS*QQRAQA
Trigger: TGCTTGGGCCCTCTGCTGCCAACTGCTCAAACCTGC...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATTCTTCTTTTACCAACTaGTCCTGTTGGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHSSFTN*SCWYLD
Trigger: GTCCAGATACCAACAGGATCAGTTGGTAAAAGAAGA...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCATGTCTCACTCCTTTGTaGTTGAGCCATACAAGGTGT +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTACLTPL*LSHTRC
Trigger: ACACCTTGTATGGCTCAATCACAAAGGAGTGAGACA...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGCACCTGACCACAATCTaGCTCCCCTCCTTAGCAACC +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKHLTTI*LPSLAT
Trigger: GGTTGCTAAGGAGGGGAGTCAGATTGTGGTCAGGTG...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAATGTCTCACCCAATCCTaGAACTGCAGTGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSECLTQS*NCSVTK
Trigger: CTTGGTTACACTGCAGTTTCAGGATTGGGTGAGACA...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAGAGCTAAAGCAGGTTTaGGCAGTTGGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLELKQV*AVGSRG
Trigger: CCCTCTGCTGCCAACTGCTCAAACCTGCTTTAGCTC...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAGAGCTAAAGCAGGTTTaGGCAGTTGGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLELKQV*AVGSRG
Trigger: CCCTCTGCTGCCAACTGCTCAAACCTGCTTTAGCTC...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAATAAAGCAAGTCCTCTaGTTGTACTCGATTGATATC +
Preference number: 4 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEIKQVL*LYSIDI
Trigger: GATATCAATCGAGTACAAGCAGAGGACTTGCTTTAT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGAGCTTAGTATGTCAGTaGAGCGGCATGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLSLVCQ*SGMAES
Trigger: GGACTCAGCCATGCCGCTGCACTGACATACTAAGCT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTATGCCCCCACTCCATTTaGCTAGCTTCACTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLCPHSI*LASLSW
Trigger: CCAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCA...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTGCCAGGGTGCCTGACTaGACAGCTTTGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAARVPD*TALGSN
Trigger: GTTTGAACCCAAAGCTGTGCAGTCAGGCACCCTGGC...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTAGGTTCAACACCAGGTaGAAAGCCATCCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSRFNTR*KAIQVC
Trigger: GCACACCTGGATGGCTTTGCACCTGGTGTTGAACCT...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGGTAGACTGGTCCCTATaGCATTTCCACAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLVDWSL*HFHRLR
Trigger: CCTGAGCCTGTGGAAATGGCATAGGGACCAGTCTAC...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCGTAGAGAAGCACCTTaGTACCCTCTCCCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGARREAP*YPLPLY
Trigger: GTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAAGGAGGCCAAGACCTaGTCCCAAGTCATGGGCGTA +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYKEAKT*SQVMGV
Trigger: TACGCCCATGACTTGGGAGCAGGTCTTGGCCTCCTT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCAGCCCCAAGCTGCTTaGATGTCAGTAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYQPQAA*MSVAGF
Trigger: GAACCCAGCTACTGACATGCAAGCAGCTTGGGGCTG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAACAAGAAGGTCCCATCTaGCATATCCCGCAATTTGTC +
Preference number: 4 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEQEGPI*HIPQFV
Trigger: GACAAATTGCGGGATATGCCAGATGGGACCTTCTTG...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAGATCCTGTTGGTATCTaGACACTGGGTACATCAGCT +
Preference number: 4 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEDPVGI*TLGTSA
Trigger: AGCTGATGTACCCAGTGTCCAGATACCAACAGGATC...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGTCAGTGCAGCGGCATaGCTGAGTCCTAGAGAACCT +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYVSAAA*LSPREP
Trigger: AGGTTCTCTAGGACTCAGCCATGCCGCTGCACTGAC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAGTTGTTTGCCACAAGTaGCTGGAGCTAAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEVVCHK*LELKQV
Trigger: AACCTGCTTTAGCTCCAGCCACTTGTGGCAAACAAC...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTCTTAGATTATTTAAATaGAATCCCAAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GQISGKDAGSLSRPESWRLRLFK*NPKPPH
Trigger: ATGGGGAGGCTTGGGATTTCATTTAAATAATCTAAG...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTATGTGTAATGTGGTGTaGCTCTCACCCTGGACCACA +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSMCNVV*LSPWTT
Trigger: TGTGGTCCAGGGTGAGAGTCACACCACATTACACAT...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATATTCTGTCAAGTGCCTaGGAACATGTTCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHILSSA*EHVQKA
Trigger: AGCTTTTTGAACATGTTCTCAGGCACTTGACAGAAT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS-3UTR GCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAGCTCTAGACGCATTTTaGTATCATGAATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAALDAF*YHESHP
Trigger: TGGGTGAGATTCATGATAGCAAAATGCGTCTAGAGC...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAAAGCGAGGGCATCTGTaGATGAACAGGGTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLKRGHL*MNRVGK
Trigger: CTTGCCTACCCTGTTCATGCACAGATGCCCTCGCTT...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATACATTCAACTATGAGTaGCACGTTTTCCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHTFNYE*HVFPSN
Trigger: GTTTGATGGGAAAACGTGGCACTCATAGTTGAATGT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGCATGTTTACTATTTCTaGAGGGCCTTTAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQHVYYF*RAFKLG
Trigger: CCCAAGTTTAAAGGCCCTGCAGAAATAGTAAACATG...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCATGTTTACTATTTCTaGAGGGCCTTTAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHHVYYF*RAFKLG
Trigger: CCCAAGTTTAAAGGCCCTGCAGAAATAGTAAACATG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTGCAGGAATAGATGCCTaGCCCCACTCCATTTGCCTA +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAAGIDA*PHSICL
Trigger: TAGGCAAATGGAGTGGGGGCAGGCATCTATTCCTGC...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACGCAGGAATAGATGCCTaGCCCCACTCCATTTGCCTA +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYAGIDA*PHSICL
Trigger: TAGGCAAATGGAGTGGGGGCAGGCATCTATTCCTGC...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGGGGGCAGGAATAGATaGCTGCCCCCACTCCATTTG +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLGGRNR*LPPLHL
Trigger: CAAATGGAGTGGGGGCAGGCATCTATTCCTGCCCCC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTGGGGGCAGGAATAGATaGCTGCCCCCACTCCATTTG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPGGRNR*LPPLHL
Trigger: CAAATGGAGTGGGGGCAGGCATCTATTCCTGCCCCC...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCTAGCTCAGCCAGGGTaGCTGACTGCACAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPLAQPG*LTAQLW
Trigger: CCAAAGCTGTGCAGTCAGGCACCCTGGCTGAGCTAG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAGGTTCAACACCAGGTaGAAAGCCATCCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYRFNTR*KAIQVC
Trigger: GCACACCTGGATGGCTTTGCACCTGGTGTTGAACCT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCCACACCGCTGGTGTCTaGCCAACAAGGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSHTAGV*PTRSRH
Trigger: GTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTG...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGTACTTGGTCTCTCCCTaGACACCGCTGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLYLVSP*TPLVSA
Trigger: GGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGTA...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAGTAGACTGGTCCCTATaGCATTTCCACAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLVDWSL*HFHRLR
Trigger: CCTGAGCCTGTGGAAATGGCATAGGGACCAGTCTAC...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTGTAGACTGGTCCCTATaGCATTTCCACAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAVDWSL*HFHRLR
Trigger: CCTGAGCCTGTGGAAATGGCATAGGGACCAGTCTAC...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCAGCCAGCCCCAAGCTaGTTGCATGTCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLQPAPS*LHVSSW
Trigger: CCAGCTACTGACATGCAAGCAGCTTGGGGCTGGCTG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGCAGCCAGCCCCAAGCTaGTTGCATGTCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLQPAPS*LHVSSW
Trigger: CCAGCTACTGACATGCAAGCAGCTTGGGGCTGGCTG...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTGTTTCGGGGTCCCACTaGTCTGCAGAGAGCGAATCC +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPVSGSH*SAESES
Trigger: GGATTCGCTCTCTGCAGACCAGTGGGACCCCGAAAC...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGAGTCATTGGCTTAGGTaGCTTTGGTGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLSHWLR*LWWKSW
Trigger: CCAGCTCTTCCACCAAAGCCACCTAAGCCAATGACT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCGGATCTTTCGCAGCTaGATCAGGTCAGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLRIFRS*IRSGLM
Trigger: CATCAAACCTGACCTGATCCAGCTGCGAAAGATCCG...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTTTATGGTCCCAGGATTaGCTCAGAGGCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGALWSQD*LRGSWT
Trigger: AGTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAA...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTCTCCCTGCACACCGCTaGTGTCTGCCCAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: QVTAPKSHAGICKETRLFLPAHR*CLPNKE
Trigger: CTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAG...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCCTATCTGGACCCTCTaGTTTCTGAGGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYPIWTL*FLRPLK
Trigger: CTTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTAGCAGGCCCCCTATCTaGACCCTCTGGTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPSRPPI*TLWFLR
Trigger: CCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCAGCCTCAATCAGAATaGTACGATCCGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLQPQSE*YDPGAG
Trigger: GCCAGCGCCCGGATCGTACCATTCTGATTGAGGCTG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420542.5
3UTR CAA 72 bp CAGCTGACTCACTCTGAGCCTATTATGGTCCCAGGATaGGCTCAGAGGCAGCTGGACTCTATTTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: QLTHSEPIMVPG*AQRQLDSICQM
Trigger: CATTTGACAAATAGAGTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAATAGGCTCAGAGTGAGTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGTCCATTTGGAACTGCTaGAGTCATTGGCTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLSIWNC*SHWLRW
Trigger: CCACCTAAGCCAATGACTTCAGCAGTTCCAAATGGA...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAGCCATACAAGGTGTTaGTCTCGGATCTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYSHTRC*SRIFRS
Trigger: GCTGCGAAAGATCCGAGATCAACACCTTGTATGGCT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCAGGGAGTCGTTGTGCTaGACCAAGGATGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSRESLC*TKDVCW
Trigger: CCAGCAGACATCCTTGGTTCAGCACAACGACTCCCT...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACAGGGAGTCGTTGTGCTaGACCAAGGATGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDRESLC*TKDVCW
Trigger: CCAGCAGACATCCTTGGTTCAGCACAACGACTCCCT...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTATGTGTAATGTGGTGTaGCTCTCACCCTGGACCACA +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAMCNVV*LSPWTT
Trigger: TGTGGTCCAGGGTGAGAGTCACACCACATTACACAT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCAAATGAGTGTTGACTaGTGGGTGTGGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAQMSVD*WVWGMM
Trigger: CATCATGCCCCACACCCATCAGTCAACACTCATTTG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGGCACTAGACTCTCATaGAGGAGGCCAAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLGTRLS*RRPRPA
Trigger: AGCAGGTCTTGGCCTCCTTCATGAGAGTCTAGTGCC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGGGCACTAGACTCTCATaGAGGAGGCCAAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLGTRLS*RRPRPA
Trigger: AGCAGGTCTTGGCCTCCTTCATGAGAGTCTAGTGCC...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCGGCACTAGACTCTCATaGAGGAGGCCAAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSGTRLS*RRPRPA
Trigger: AGCAGGTCTTGGCCTCCTTCATGAGAGTCTAGTGCC...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTGAGCTAAAGCAGGTTTaGGCAGTTGGCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPELKQV*AVGSRG
Trigger: CCCTCTGCTGCCAACTGCTCAAACCTGCTTTAGCTC...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCCCCCAGTACCATTCTaGATCCTGAAGAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLPPVPF*ILKRNR
Trigger: TCTGTTTCTCTTCAGGATGCAGAATGGTACTGGGGG...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAAGCTCTAGACGCATTTTaGTATCATGAATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEALDAF*YHESHP
Trigger: TGGGTGAGATTCATGATAGCAAAATGCGTCTAGAGC...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAATCCCGGCCGGCTGCTaGTCGGCCTCTCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTIPAGC*SASPLH
Trigger: GTGAAGTGGAGAGGCCGAGCAGCAGCCGGCCGGGAT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTTGCCCCCACTCCATTTaGCTAGCTTCACTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPCPHSI*LASLSW
Trigger: CCAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCA...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTGCCAGGGTGCCTGACTaGACAGCTTTGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPARVPD*TALGSN
Trigger: GTTTGAACCCAAAGCTGTGCAGTCAGGCACCCTGGC...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCCGTAGAGAAGCACCTTaGTACCCTCTCCCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSRREAP*YPLPLY
Trigger: GTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACG...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTAAGGAGGCCAAGACCTaGTCCCAAGTCATGGGCGTA +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPKEAKT*SQVMGV
Trigger: TACGCCCATGACTTGGGAGCAGGTCTTGGCCTCCTT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCAGCCCCAAGCTGCTTaGATGTCAGTAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDQPQAA*MSVAGF
Trigger: GAACCCAGCTACTGACATGCAAGCAGCTTGGGGCTG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCATTAGAAAACAGGAATTaGCCAGGTGCAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTALENRN*PGAILS
Trigger: ACTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAA...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGGAAACGAGGTTGTTTaGCACAAGTGGCTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYGNEVV*HKWLEL
Trigger: TAGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTGGAAACGAGGTTGTTTaGCACAAGTGGCTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAGNEVV*HKWLEL
Trigger: TAGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCC...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTAGTCATTGGCTTAGGTaGCTTTGGTGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGASHWLR*LWWKSW
Trigger: CCAGCTCTTCCACCAAAGCCACCTAAGCCAATGACT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTACGGATCTTTCGCAGCTaGATCAGGTCAGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLRIFRS*IRSGLM
Trigger: CATCAAACCTGACCTGATCCAGCTGCGAAAGATCCG...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGGTCAGTGCAGCGGCATaGCTGAGTCCTAGAGAACCT +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLVSAAA*LSPREP
Trigger: AGGTTCTCTAGGACTCAGCCATGCCGCTGCACTGAC...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGGTCCCATCAAGGCTTaGAGAGGGAGTGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYGPIKA*RGSESV
Trigger: AACACTTTCACTCCCTCTCCAAGCCTTGATGGGACC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCAGGTTTGAGCAGTTaGCAGCAGAGGGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QVTAPKSHAGICKETRLFAGLSS*QQRAQA
Trigger: TGCTTGGGCCCTCTGCTGCCAACTGCTCAAACCTGC...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTATTACTGGAGCAAGTTaGCCAGACTGTCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAITGAS*PDCPLL
Trigger: CAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAAT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCGCATTTTGCTATCATaGATCTCACCCAGACGTGAT +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLRILLS*ISPRRD
Trigger: ATCACGTCTGGGTGAGATTCATGATAGCAAAATGCG...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAGGGCTGGTGAGATGCTaGAGCCTAAATTATGTTGGT +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLGLVRC*SLNYVG
Trigger: ACCAACATAATTTAGGCTTCAGCATCTCACCAGCCC...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGGGCTGGTGAGATGCTaGAGCCTAAATTATGTTGGT +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYGLVRC*SLNYVG
Trigger: ACCAACATAATTTAGGCTTCAGCATCTCACCAGCCC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTCACCTGACCACAATCTaGCTCCCCTCCTTAGCAACC +
Preference number: 4 (lower is better)
Translates to: QVTAPKSHAGICKETRLFHLTTI*LPSLAT
Trigger: GGTTGCTAAGGAGGGGAGTCAGATTGTGGTCAGGTG...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTTGTCAAATGAGTGTTaGCTGATGGGTGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYLSNEC*LMGVGH
Trigger: ATGCCCCACACCCATCAGTCAACACTCATTTGACAA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGTTGTCAAATGAGTGTTaGCTGATGGGTGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKLSNEC*LMGVGH
Trigger: ATGCCCCACACCCATCAGTCAACACTCATTTGACAA...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGACAGCTGACTCACTCTaGGCCTATTATGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLTADSL*AYYGPR
Trigger: CCTGGGACCATAATAGGCTCAGAGTGAGTCAGCTGT...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTACAGCTGACTCACTCTaGGCCTATTATGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPTADSL*AYYGPR
Trigger: CCTGGGACCATAATAGGCTCAGAGTGAGTCAGCTGT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTTTGGGTTCAAACAGCTaGCTCACTCTGAGCCTATTA +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSLGSNS*LTLSLL
Trigger: TAATAGGCTCAGAGTGAGTCAGCTGTTTGAACCCAA...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTACCCCCAGTACCATTCTaGATCCTGAAGAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLPPVPF*ILKRNR
Trigger: TCTGTTTCTCTTCAGGATGCAGAATGGTACTGGGGG...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCCATAGCCCCGAGCAGTaGTGTAGATCACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSHSPEQ*CRSHSA
Trigger: AGCACTGTGTGATCTACAGCACTGCTCGGGGCTATG...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACAAGCGAGGGCATCTGTaGATGAACAGGGTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDKRGHL*MNRVGK
Trigger: CTTGCCTACCCTGTTCATGCACAGATGCCCTCGCTT...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATGCCATCTTCTCTCCCTaGAAAAGCTTCAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYAIFSP*KSFRNH
Trigger: GTGGTTTCTGAAGCTTTTGCAGGGAGAGAAGATGGC...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTGCAGGAATAGATGCCTaGCCCCACTCCATTTGCCTA +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPAGIDA*PHSICL
Trigger: TAGGCAAATGGAGTGGGGGCAGGCATCTATTCCTGC...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCAGGGTGCCTGACTaGACAGCTTTGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QVTAPKSHAGICKETRLFARVPD*TALGSN
Trigger: GTTTGAACCCAAAGCTGTGCAGTCAGGCACCCTGGC...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTCGTAGAGAAGCACCTTaGTACCCTCTCCCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: QVTAPKSHAGICKETRLFRREAP*YPLPLY
Trigger: GTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACG...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAAACTGCAGTTAAGATaGCAAGACAGTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYKLQLR*QDSPRV
Trigger: GACCCTGGGACTGTCTTGGCATCTTAACTGCAGTTT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGAAACTGCAGTTAAGATaGCAAGACAGTCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKKLQLR*QDSPRV
Trigger: GACCCTGGGACTGTCTTGGCATCTTAACTGCAGTTT...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAACCCTCCCCAACAATTaGACAGCAATGTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLTLPNN*TAMSEH
Trigger: GTGTTCAGACATTGCTGTGCAATTGTTGGGGAGGGT...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTGATCCTGTTGGTATCTaGACACTGGGTACATCAGCT +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGADPVGI*TLGTSA
Trigger: AGCTGATGTACCCAGTGTCCAGATACCAACAGGATC...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAGATCCTGTTGGTATCTaGACACTGGGTACATCAGCT +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLDPVGI*TLGTSA
Trigger: AGCTGATGTACCCAGTGTCCAGATACCAACAGGATC...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAATCTGTTGAGGGTGTCTaGCTAAACAAAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSESVEGV*LNKTKT
Trigger: GGTTTTTGTTTTGTTTAGCCAGACACCCTCAACAGA...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGAAACAGCCTTCTTCGTaGGGGGAAGAGAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLKQPSS*GEERLP
Trigger: TGGCAGTCTCTCTTCCCCCCACGAAGAAGGCTGTTT...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTAAACAGCCTTCTTCGTaGGGGGAAGAGAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPKQPSS*GEERLP
Trigger: TGGCAGTCTCTCTTCCCCCCACGAAGAAGGCTGTTT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAGCACATGTGTAATGTaGTGTGACTCTCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYSTCVM*CDSHPG
Trigger: TCCAGGGTGAGAGTCACACCACATTACACATGTGCT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAAGCACATGTGTAATGTaGTGTGACTCTCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLSTCVM*CDSHPG
Trigger: TCCAGGGTGAGAGTCACACCACATTACACATGTGCT...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTTTATGGTCCCAGGATTaGCTCAGAGGCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPLWSQD*LRGSWT
Trigger: AGTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAA...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTACTCTGAGCCTATTATaGTCCCAGGATTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGATLSLL*SQDWLR
Trigger: TCTGAGCCAATCCTGGGACCATAATAGGCTCAGAGT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGCTGACTGCACAGCTTTaGGTTCAAACAGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKLTAQL*VQTADS
Trigger: TGAGTCAGCTGTTTGAACCCAAAGCTGTGCAGTCAG...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACCTGACTGCACAGCTTTaGGTTCAAACAGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYLTAQL*VQTADS
Trigger: TGAGTCAGCTGTTTGAACCCAAAGCTGTGCAGTCAG...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCCTATCTGGACCCTCTaGTTTCTGAGGCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPPIWTL*FLRPLK
Trigger: CTTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCGCATTTTGCTATCATaGATCTCACCCAGACGTGAT +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGARILLS*ISPRRD
Trigger: ATCACGTCTGGGTGAGATTCATGATAGCAAAATGCG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTAGCCATACAAGGTGTTaGTCTCGGATCTTTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPSHTRC*SRIFRS
Trigger: GCTGCGAAAGATCCGAGATCAACACCTTGTATGGCT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTATGTCTCACTCCTTTGTaGTTGAGCCATACAAGGTGT +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLCLTPL*LSHTRC
Trigger: ACACCTTGTATGGCTCAATCACAAAGGAGTGAGACA...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACATGTGTAATGTGGTGTaGCTCTCACCCTGGACCACA +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDMCNVV*LSPWTT
Trigger: TGTGGTCCAGGGTGAGAGTCACACCACATTACACAT...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCAAATGAGTGTTGACTaGTGGGTGTGGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPQMSVD*WVWGMM
Trigger: CATCATGCCCCACACCCATCAGTCAACACTCATTTG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACGAGCAGACACATTACTaGATACTACAGCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYEQTHY*ILQPCI
Trigger: GATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTC...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAACAGTTGGCTTTCTTGTaGGTCAGATATTTTTACGTA +
Preference number: 4 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEQLAFL*VRYFYV
Trigger: TACGTAAAAATATCTGACTCACAAGAAAGCCAACTG...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCTAGCAACTACATTATaGACTGTCCCATCACAAGAC +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSLATTL*TVPSQD
Trigger: GTCTTGTGATGGGACAGTTCATAATGTAGTTGCTAG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCATTATTAACTTATTATTaGCTCCCTTCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTALLTYY*LPSAKS
Trigger: TGACTTTGCGGAAGGGAGGCAATAATAAGTTAATAA...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTGCTCTAGACGCATTTTaGTATCATGAATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSALDAF*YHESHP
Trigger: TGGGTGAGATTCATGATAGCAAAATGCGTCTAGAGC...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAAGCTTAGTATGTCAGTaGAGCGGCATGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPSLVCQ*SGMAES
Trigger: GGACTCAGCCATGCCGCTGCACTGACATACTAAGCT...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCACTAAAAGCACTGCATTaGACCTTTTCTTTACTCATA +
Preference number: 4 (lower is better)
Translates to: AEDSWPKIKATGAGGQTALKALH*TFSLLI
Trigger: TATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAG...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCAGGAATTGCCCAGGTaGAATTCTCAGTTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSQELPR*NSQFKR
Trigger: TCTCTTAAACTGAGAATTGCACCTGGGCAATTCCTG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGAGTCATTGGCTTAGGTaGCTTTGGTGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLSHWLR*LWWKSW
Trigger: CCAGCTCTTCCACCAAAGCCACCTAAGCCAATGACT...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGGCTTCACATCAAGTTTaGGATTGTACTGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLASHQV*DCTEQE
Trigger: CTCTTGCTCAGTACAATCCCAAACTTGATGTGAAGC...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTATTGGTATCTGGACACTaGGTACATCAGCTTCACATC +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLLVSGH*VHQLHI
Trigger: GATGTGAAGCTGATGTACCCAGTGTCCAGATACCAA...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTATTTCAATTGACAGTTTaGGGAAGGGATGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLFQLTV*GRDVLA
Trigger: AGCCAGCACATCCCTTCCCCAAACTGTCAATTGAAA...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGGATAAAGATGGTACTTaGTCTCTCCCTGCACACCGC +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLDKDGT*SLPAHR
Trigger: GCGGTGTGCAGGGAGAGACCAAGTACCATCTTTATC...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACGATAAAGATGGTACTTaGTCTCTCCCTGCACACCGC +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDDKDGT*SLPAHR
Trigger: GCGGTGTGCAGGGAGAGACCAAGTACCATCTTTATC...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGCTCTCAAATGACCCCTaGGTCTTAGATCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKLSNDP*VLDPTK
Trigger: TTTTGTGGGATCTAAGACCCAGGGGTCATTTGAGAG...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCAGTGGGTAGTAGACTaGTCCCTATGCCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLQWVVD*SLCHFH
Trigger: GTGGAAATGGCATAGGGACCAGTCTACTACCCACTG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCAGTGGGTAGTAGACTaGTCCCTATGCCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDQWVVD*SLCHFH
Trigger: GTGGAAATGGCATAGGGACCAGTCTACTACCCACTG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCCATCTAAGGCCAGGTaGAGACAACACTGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDPSKAR*RQHCSV
Trigger: CACAGAACAGTGTTGTCTCCACCTGGCCTTAGATGG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACATTACTGGAGCAAGTTaGCCAGACTGTCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDITGAS*PDCPLL
Trigger: CAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAAT...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 72 bp CACACTGAAATTTTAGTACCAGATGGGAGGGATTCCTaGCACGTAATCTTGAGCATCCACCTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HTEILVPDGRDS*HVILSIHLLQQ
Trigger: CTGCTGAAGCAGGTGGATGCTCAAGATTACGTGCAAGGAATCCCTCCCATCTGGTACTAAAATTTCAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCTCCATTTGGAACTGCTaGAGTCATTGGCTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSSIWNC*SHWLRW
Trigger: CCACCTAAGCCAATGACTTCAGCAGTTCCAAATGGA...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTCCCTGCATTTTTGTTaGGGCATCTCGGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDSLHFC*GISDQE
Trigger: TTCTTGGTCCGAGATGCCTCAACAAAAATGCAGGGA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTCTTCTTTTACCAACTaGTCCTGTTGGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYSSFTN*SCWYLD
Trigger: GTCCAGATACCAACAGGATCAGTTGGTAAAAGAAGA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGTCTTCTTTTACCAACTaGTCCTGTTGGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKSSFTN*SCWYLD
Trigger: GTCCAGATACCAACAGGATCAGTTGGTAAAAGAAGA...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCAAAGGAGGGGGAAATaGAGGGAAATTAAACCATGT +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAQRRGK*REIKPC
Trigger: ACATGGTTTAATTTCCCTTCATTTCCCCCTCCTTTG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACCAAAGGAGGGGGAAATaGAGGGAAATTAAACCATGT +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYQRRGK*REIKPC
Trigger: ACATGGTTTAATTTCCCTTCATTTCCCCCTCCTTTG...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGTTGTCAAATGAGTGTTaGCTGATGGGTGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLLSNEC*LMGVGH
Trigger: ATGCCCCACACCCATCAGTCAACACTCATTTGACAA...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTGTCTCACCCAATCCTaGAACTGCAGTGTAACCAAG +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLCLTQS*NCSVTK
Trigger: CTTGGTTACACTGCAGTTTCAGGATTGGGTGAGACA...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAGTCAAACCTCTCAAATaGCCCCTGGGTCTTAGATCC +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPVKPLK*PLGLRS
Trigger: GGATCTAAGACCCAGGGGTCATTTGAGAGGTTTGAC...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCTAGCAACTACATTATaGACTGTCCCATCACAAGAC +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYLATTL*TVPSQD
Trigger: GTCTTGTGATGGGACAGTTCATAATGTAGTTGCTAG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCAGAACACAACAAAATaGCCCCGAACTTTCAAGCTA +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAQNTTK*PRTFKL
Trigger: TAGCTTGAAAGTTCGGGGGCATTTTGTTGTGTTCTG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTGCCATCTTCTCTCCCTaGAAAAGCTTCAGAAACCAC +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPAIFSP*KSFRNH
Trigger: GTGGTTTCTGAAGCTTTTGCAGGGAGAGAAGATGGC...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACACTAGCTCAGCCAGGGTaGCTGACTGCACAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTLAQPG*LTAQLW
Trigger: CCAAAGCTGTGCAGTCAGGCACCCTGGCTGAGCTAG...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTACTCTGAGCCTATTATaGTCCCAGGATTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPTLSLL*SQDWLR
Trigger: TCTGAGCCAATCCTGGGACCATAATAGGCTCAGAGT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATAATTTTAGTACCAGATaGGAGGGATTCCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYNFSTR*EGFLAR
Trigger: ACGTGCAAGGAATCCCTCCCATCTGGTACTAAAATT...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAATTTTAGTACCAGATaGGAGGGATTCCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYNFSTR*EGFLAR
Trigger: ACGTGCAAGGAATCCCTCCCATCTGGTACTAAAATT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAGGTCCCATCAAGGCTTaGAGAGGGAGTGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPGPIKA*RGSESV
Trigger: AACACTTTCACTCCCTCTCCAAGCCTTGATGGGACC...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCGTTGTTTGCCACAAGTaGCTGGAGCTAAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSVVCHK*LELKQV
Trigger: AACCTGCTTTAGCTCCAGCCACTTGTGGCAAACAAC...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTATCTTTATTGCATTACTaGAGCAAGTTGGCCAGACTG +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLSLLHY*SKLARL
Trigger: CAGTCTGGCCAACTTGCTCCAGTAATGCAATAAAGA...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTTCTTTATTGCATTACTaGAGCAAGTTGGCCAGACTG +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGASLLHY*SKLARL
Trigger: CAGTCTGGCCAACTTGCTCCAGTAATGCAATAAAGA...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCTTAGATTATTTAAATaGAATCCCAAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSLRLFK*NPKPPH
Trigger: ATGGGGAGGCTTGGGATTTCATTTAAATAATCTAAG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTGGGTTCAAACAGCTaGCTCACTCTGAGCCTATTA +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLLGSNS*LTLSLL
Trigger: TAATAGGCTCAGAGTGAGTCAGCTGTTTGAACCCAA...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGAGCAGACACATTACTaGATACTACAGCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: SQVTAPKSHAGICKETRLEQTHY*ILQPCI
Trigger: GATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTCATAGCATCCTTTCTTaGTACTCTCACGAATTAAGA +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSHSILS*YSHELR
Trigger: TCTTAATTCGTGAGAGTAGCAAGAAAGGATGCTATG...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACACAGCCCCAAGCTGCTTaGATGTCAGTAGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTQPQAA*MSVAGF
Trigger: GAACCCAGCTACTGACATGCAAGCAGCTTGGGGCTG...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTTAGAAAACAGGAATTaGCCAGGTGCAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYLENRN*PGAILS
Trigger: ACTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTACATGTTCAAAAAGCTaGTCTCCATCTCGACTTTCA +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGATCSKS*SPSRLS
Trigger: TGAAAGTCGAGATGGAGAGCAGCTTTTTGAACATGT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACCTTTGGTGGAAGAGCTaGAGGATCCATTTCAATATA +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYLWWKS*RIHFNI
Trigger: TATATTGAAATGGATCCTCCAGCTCTTCCACCAAAG...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTTGGTATCTGGACACTaGGTACATCAGCTTCACATC +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDLVSGH*VHQLHI
Trigger: GATGTGAAGCTGATGTACCCAGTGTCCAGATACCAA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTTTTCCCATCAAACATTaGTCTGGCAACAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSFPIKH*SGNKLF
Trigger: AAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAA...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACTGACTGCACAGCTTTaGGTTCAAACAGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPLTAQL*VQTADS
Trigger: TGAGTCAGCTGTTTGAACCCAAAGCTGTGCAGTCAG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGTTTCAATTGACAGTTTaGGGAAGGGATGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLFQLTV*GRDVLA
Trigger: AGCCAGCACATCCCTTCCCCAAACTGTCAATTGAAA...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCTTTCAATTGACAGTTTaGGGAAGGGATGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSFQLTV*GRDVLA
Trigger: AGCCAGCACATCCCTTCCCCAAACTGTCAATTGAAA...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGCTCTCAAATGACCCCTaGGTCTTAGATCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLLSNDP*VLDPTK
Trigger: TTTTGTGGGATCTAAGACCCAGGGGTCATTTGAGAG...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCCTCTCAAATGACCCCTaGGTCTTAGATCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSLSNDP*VLDPTK
Trigger: TTTTGTGGGATCTAAGACCCAGGGGTCATTTGAGAG...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGAAGTCATGTGGCAACTaGTCAGAAAAGATACTGTCA +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKKSCGN*SEKILS
Trigger: TGACAGTATCTTTTCTGACCAGTTGCCACATGACTT...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAGTTGTTTGCCACAAGTaGCTGGAGCTAAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPVVCHK*LELKQV
Trigger: AACCTGCTTTAGCTCCAGCCACTTGTGGCAAACAAC...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTGTCTCACTCCTTTGTaGTTGAGCCATACAAGGTGT +
Preference number: 4 (lower is better)
Translates to: QVTAPKSHAGICKETRLFCLTPL*LSHTRC
Trigger: ACACCTTGTATGGCTCAATCACAAAGGAGTGAGACA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACTGCTTGTACTCGATTaGTATCCTCAACAAACCAGG +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPLLVLD*YPQQTR
Trigger: CCTGGTTTGTTGAGGATATCAATCGAGTACAAGCAG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTGTATACATTCAACTATaGGTGCCACGTTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPVYIQL*VPRFPI
Trigger: GATGGGAAAACGTGGCACTCATAGTTGAATGTATAC...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGCAAAGGAGGGGGAAATaGAGGGAAATTAAACCATGT +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLQRRGK*REIKPC
Trigger: ACATGGTTTAATTTCCCTTCATTTCCCCCTCCTTTG...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCATTGGGTTCAAACAGCTaGCTCACTCTGAGCCTATTA +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPLGSNS*LTLSLL
Trigger: TAATAGGCTCAGAGTGAGTCAGCTGTTTGAACCCAA...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGCTAGCAACTACATTATaGACTGTCCCATCACAAGAC +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLLATTL*TVPSQD
Trigger: GTCTTGTGATGGGACAGTTCATAATGTAGTTGCTAG...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTATCTGAACACATCTGGTaGCAAGAACAATTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLSEHIW*QEQFVK
Trigger: CTTTACAAATTGTTCTTGTCACCAGATGTGTTCAGA...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTCTGAACACATCTGGTaGCAAGAACAATTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYSEHIW*QEQFVK
Trigger: CTTTACAAATTGTTCTTGTCACCAGATGTGTTCAGA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGTTTCATTCCCCTCTCTaGGAAATCGCTCAATATATT +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKFHSPL*EIAQYI
Trigger: AATATATTGAGCGATTTCGCAGAGAGGGGAATGAAA...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTATAAAGCAAGTCCTCTaGTTGTACTCGATTGATATC +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAIKQVL*LYSIDI
Trigger: GATATCAATCGAGTACAAGCAGAGGACTTGCTTTAT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCAGGAATTGCCCAGGTaGAATTCTCAGTTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDQELPR*NSQFKR
Trigger: TCTCTTAAACTGAGAATTGCACCTGGGCAATTCCTG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCAGGAATTGCCCAGGTaGAATTCTCAGTTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPQELPR*NSQFKR
Trigger: TCTCTTAAACTGAGAATTGCACCTGGGCAATTCCTG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTTGCAATGTCTTTATTaGATTACTGGAGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYLQCLY*ITGASW
Trigger: CCAACTTGCTCCAGTAATGCAATAAAGACATTGCAA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTTTGCAATGTCTTTATTaGATTACTGGAGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGALQCLY*ITGASW
Trigger: CCAACTTGCTCCAGTAATGCAATAAAGACATTGCAA...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAAAACAGCCTTCTTCGTaGGGGGAAGAGAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTKQPSS*GEERLP
Trigger: TGGCAGTCTCTCTTCCCCCCACGAAGAAGGCTGTTT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATCATCAAACATTGGTCTaGCAACAAACTGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYHQTLV*QQTVLL
Trigger: CAACAAAACAGTTTGTTGCCAGACCAATGTTTGATG...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGCATCAAACATTGGTCTaGCAACAAACTGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKHQTLV*QQTVLL
Trigger: CAACAAAACAGTTTGTTGCCAGACCAATGTTTGATG...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTTTCCCATCAAACATTaGTCTGGCAACAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYFPIKH*SGNKLF
Trigger: AAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAA...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACAATTTTAGTACCAGATaGGAGGGATTCCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDNFSTR*EGFLAR
Trigger: ACGTGCAAGGAATCCCTCCCATCTGGTACTAAAATT...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 72 bp CTCGGCCTCTCCACTTCACATTCACAAAATCACTTCTaGTGCAAAACAAGCAGTCTATGTAGAAAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LGLSTSHSQNHF*CKTSSLCRKNA
Trigger: GGCATTCTTTCTACATAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGAATGTGAAGTGGAGAGGCCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 72 bp TCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTaGGCTTCTGAACATAATACTTCTTCAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SHQTLVWQQTVL*ASEHNTSSEGG
Trigger: CCCTCCCTCTGAAGAAGTATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTATTATTAACTTATTATTaGCTCCCTTCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: YCITGASWPDCPLLGKVLLLTYY*LPSAKS
Trigger: TGACTTTGCGGAAGGGAGGCAATAATAAGTTAATAA...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTTATTAACTTATTATTaGCTCCCTTCCGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FPQAQGQASHVATGQKRYLLTYY*LPSAKS
Trigger: TGACTTTGCGGAAGGGAGGCAATAATAAGTTAATAA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTACATTCAACTATGAGTaGCACGTTTTCCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPTFNYE*HVFPSN
Trigger: GTTTGATGGGAAAACGTGGCACTCATAGTTGAATGT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTACTAAAAGCACTGCATTaGACCTTTTCTTTACTCATA +
Preference number: 4 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLLKALH*TFSLLI
Trigger: TATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAG...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAGGAAACGAGGTTGTTTaGCACAAGTGGCTGGAGCTA +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTGNEVV*HKWLEL
Trigger: TAGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCC...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGTCTGTTGAGGGTGTCTaGCTAAACAAAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLSVEGV*LNKTKT
Trigger: GGTTTTTGTTTTGTTTAGCCAGACACCCTCAACAGA...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGAAGTCATGTGGCAACTaGTCAGAAAAGATACTGTCA +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLKSCGN*SEKILS
Trigger: TGACAGTATCTTTTCTGACCAGTTGCCACATGACTT...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCATCTTTATTGCATTACTaGAGCAAGTTGGCCAGACTG +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPSLLHY*SKLARL
Trigger: CAGTCTGGCCAACTTGCTCCAGTAATGCAATAAAGA...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 72 bp CATTCAACTATGAGTGCCACGTTTTCCCATCAAACATaGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HSTMSATFSHQT*VWQQTVLLASE
Trigger: TTCAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGGCACTCATAGTTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 72 bp TTTATTGCAATGTCTTTATTGCATTACTGGAGCAAGTaGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAAA +
Preference number: 4 (lower is better)
Translates to: FIAMSLLHYWSK*ARLSPLGEGIK
Trigger: TTTAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAAGACATTGCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCTTAGATTATTTAAATaGAATCCCAAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPLRLFK*NPKPPH
Trigger: ATGGGGAGGCTTGGGATTTCATTTAAATAATCTAAG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCAGTTGGCTTTCTTGTaGGTCAGATATTTTTACGTA +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDQLAFL*VRYFYV
Trigger: TACGTAAAAATATCTGACTCACAAGAAAGCCAACTG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTCTGAACACATCTGGTaGCAAGAACAATTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDSEHIW*QEQFVK
Trigger: CTTTACAAATTGTTCTTGTCACCAGATGTGTTCAGA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTTTCATTCCCCTCTCTaGGAAATCGCTCAATATATT +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDFHSPL*EIAQYI
Trigger: AATATATTGAGCGATTTCGCAGAGAGGGGAATGAAA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCATAGCATCCTTTCTTaGTACTCTCACGAATTAAGA +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDHSILS*YSHELR
Trigger: TCTTAATTCGTGAGAGTAGCAAGAAAGGATGCTATG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAAAAGCCATCCAGGTGTaGCCAACAGCAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTKAIQV*PTAISL
Trigger: CAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGTTGCAATGTCTTTATTaGATTACTGGAGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLLQCLY*ITGASW
Trigger: CCAACTTGCTCCAGTAATGCAATAAAGACATTGCAA...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCATCTGTTGAGGGTGTCTaGCTAAACAAAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPSVEGV*LNKTKT
Trigger: GGTTTTTGTTTTGTTTAGCCAGACACCCTCAACAGA...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCATCAAACATTGGTCTaGCAACAAACTGTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDHQTLV*QQTVLL
Trigger: CAACAAAACAGTTTGTTGCCAGACCAATGTTTGATG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCCTACACGAATTTTCTTaGACACATCAAAGACAACAG +
Preference number: 4 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSLHEFS*THQRQQ
Trigger: CTGTTGTCTTTGATGTGTCCAAGAAAATTCGTGTAG...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCTACACGAATTTTCTTaGACACATCAAAGACAACAG +
Preference number: 4 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDLHEFS*THQRQQ
Trigger: CTGTTGTCTTTGATGTGTCCAAGAAAATTCGTGTAG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR TCA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTCAGTTGGCTTTCTTGTaGGTCAGATATTTTTACGTA +
Preference number: 4 (lower is better)
Translates to: QVTAPKSHAGICKETRLFQLAFL*VRYFYV
Trigger: TACGTAAAAATATCTGACTCACAAGAAAGCCAACTG...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGCTAAAAGCACTGCATTaGACCTTTTCTTTACTCATA +
Preference number: 4 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLLKALH*TFSLLI
Trigger: TATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAG...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACACGAACTTTCAAGCTATaGGCTTTTCTCCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTRTFKL*AFLLRG
Trigger: TCCTCTGAGGAGAAAAGCCCATAGCTTGAAAGTTCG...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CCA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACTACACGAATTTTCTTaGACACATCAAAGACAACAG +
Preference number: 4 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPLHEFS*THQRQQ
Trigger: CTGTTGTCTTTGATGTGTCCAAGAAAATTCGTGTAG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
3UTR CAA 72 bp TTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTaGTTGGCTTCTGAACATAATACTTCTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FSHQTLVWQQTV*LASEHNTSSEG
Trigger: TCCCTCTGAAGAAGTATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACATTAGAAAACAGGAATTaGCCAGGTGCAATTCTCAGT +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTLENRN*PGAILS
Trigger: ACTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAA...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAATAAAGCAAGTCCTCTaGTTGTACTCGATTGATATC +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTIKQVL*LYSIDI
Trigger: GATATCAATCGAGTACAAGCAGAGGACTTGCTTTAT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR GCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACACATAGCATCCTTTCTTaGTACTCTCACGAATTAAGA +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTHSILS*YSHELR
Trigger: TCTTAATTCGTGAGAGTAGCAAGAAAGGATGCTATG...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CCA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACATTTCCCATCAAACATTaGTCTGGCAACAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTFPIKH*SGNKLF
Trigger: AAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAA...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS GCA 90 bp AGGCCGGGACTCGGGCTCCTCTCCGGTCGGTCTCGGAACCGAAGCTaGCGCAGCCTCGGGAATGGGGCCGGCCGGAGAAGTCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: RPGLGLLSGRSRNRS*RSLGNGAGRRSPVS
Trigger: GCTGACTGGACTTCTCCGGCCGGCCCCATTCCCGAGGCTGCGGCAGCTTCGGTTCCGAGACCGACCGGAGAGGAGCCCGAGTCCCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CCA 90 bp CCTCTCCGGTCGGTCTCGGAACCGAAGCTGCCGCAGCCTCGGGAATaGGGCCGGCCGGAGAAGTCCAGTCAGCTCGGCTTGTCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: PLRSVSEPKLPQPRE*GRPEKSSQLGLSGR
Trigger: GCGCCCAGACAAGCCGAGCTGACTGGACTTCTCCGGCCGGCCCCATTCCCGAGGCTGCGGCAGCTTCGGTTCCGAGACCGACCGGAGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CCA 90 bp CCGCGCTCTCCCCCAGCCTCAATCAGAATGGTACGATCCGGGCGCTaGCCGCACTCCAGGAGTCAGTGCCGGGAGCACGCGAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PRSPPASIRMVRSGR*PHSRSQCREHASQA
Trigger: CGCCTGGCTCGCGTGCTCCCGGCACTGACTCCTGGAGTGCGGCCAGCGCCCGGATCGTACCATTCTGATTGAGGCTGGGGGAGAGCGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS GCA 90 bp ATCAGAATGGTACGATCCGGGCGCTGGCCGCACTCCAGGAGTCAGTaGCGGGAGCACGCGAGCCAGGCGAGGAGGGAGTGGGGCGAGGGA +
Preference number: 5 (lower is better)
Translates to: IRMVRSGRWPHSRSQ*REHASQARREWGEG
Trigger: TCCCTCGCCCCACTCCCTCCTCGCCTGGCTCGCGTGCTCCCGGCACTGACTCCTGGAGTGCGGCCAGCGCCCGGATCGTACCATTCTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS CCA 90 bp TCGGGAATGGGGCCGGCCGGAGAAGTCCAGTCAGCTCGGCTTGTCTaGGCGCTCCCGCCGGGGTGTAAGAACCAACCCGACCGCACCAAC +
Preference number: 5 (lower is better)
Translates to: SGMGPAGEVQSARLV*ALPPGCKNQPDRTN
Trigger: GTTGGTGCGGTCGGGTTGGTTCTTACACCCCGGCGGGAGCGCCCAGACAAGCCGAGCTGACTGGACTTCTCCGGCCGGCCCCATTCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CCA 90 bp GCTCCCCAATCAGCCATCCGCGCTCTCCCCCAGCCTCAATCAGAATaGTACGATCCGGGCGCTGGCCGCACTCCAGGAGTCAGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: APQSAIRALPQPQSE*YDPGAGRTPGVSAG
Trigger: CCCGGCACTGACTCCTGGAGTGCGGCCAGCGCCCGGATCGTACCATTCTGATTGAGGCTGGGGGAGAGCGCGGATGGCTGATTGGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS-3UTR CAA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAAAAAGGGGGCTGGAGATaGCGTTCAAGTTTCGGGGTC +
Preference number: 5 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEKGGWR*RSSFGV
Trigger: GACCCCGAAACTTGAACGCAATCTCCAGCCCCCTTT...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTGGAGCTAAAGCAGGTTaGAGCAGTTGGCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GQISGKDAGSLSRPESWRGAKAG*SSWQQR
Trigger: CCTCTGCTGCCAACTGCTCAAACCTGCTTTAGCTCC...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAACCCGTGGAAGACACATaGGCTCTCAAAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RGPKQAPYLDPLVSEATEPVEDT*ALKASS
Trigger: TGAAGAAGCTTTGAGAGCCAATGTGTCTTCCACGGG...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTCCAGTCAGCTCGGCTaGTCTGGGCGCTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDSSQLG*SGRSRR
Trigger: CCGGCGGGAGCGCCCAGACAAGCCGAGCTGACTGGA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTGAGCCATACAAGGTGTaGATCTCGGATCTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: GQISGKDAGSLSRPESWREPYKV*ISDLSQ
Trigger: CTGCGAAAGATCCGAGATCAACACCTTGTATGGCTC...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAATTATGGTCCCAGGATaGGCTCAGAGGCAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAIMVPG*AQRQLD
Trigger: GTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAAT...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAACCAGCCCCAAGCTGCTaGCATGTCAGTAGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSEPAPSC*HVSSWV
Trigger: AACCCAGCTACTGACATGCAAGCAGCTTGGGGCTGG...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp GGCCAGATCAGTGGTAAGGACGCAGGCAGTCTATCCAGGCCCGAATCATGGCGTTACCAACTGATCCTGTaGGTATCTGGACACTGGGTA +
Preference number: 5 (lower is better)
Translates to: GQISGKDAGSLSRPESWRYQLIL*VSGHWV
Trigger: TACCCAGTGTCCAGATACCAACAGGATCAGTTGGTA...ACGCCATGATTCGGGCCTGGATAGACTGCCTGCGTCCTTACCACTGATCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGGAGCCATACAAGGTGTaGATCTCGGATCTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQEPYKV*ISDLSQ
Trigger: CTGCGAAAGATCCGAGATCAACACCTTGTATGGCTC...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGGAGGCCTACTCTGGGTaGTTAAATAGCAGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQEAYSG*LNSSRD
Trigger: GTCTCTGCTGCTATTTAACAACCCAGAGTAGGCCTC...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAAGGAAACGAGGTTGTTaGCCACAAGTGGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: AEDSWPKIKATGAGGQTARKRGC*PQVAGA
Trigger: AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCT...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATTGTAAGGAAACGAGGTaGTTTGCCACAAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHCKETR*FATSGW
Trigger: CCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACA...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS CCA 90 bp TTCCCCCGTCTCAGATCCAGGGATGGAAACACACATGGCCCAGACTaGCCAATAAGAATATTCCACTCTATCCCATCCCTACCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: FPRLRSRDGNTHGPD*PIRIFHSIPSLPSG
Trigger: GCCTGAGGGTAGGGATGGGATAGAGTGGAATATTCTTATTGGCCAGTCTGGGCCATGTGTGTTTCCATCCCTGGATCTGAGACGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATATTTCAATTGACAGTTaGGGGAAGGGATGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHISIDS*GKGCAG
Trigger: GCCAGCACATCCCTTCCCCAAACTGTCAATTGAAAT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCATCCTTGCACGTAATCTaGAGCATCCACCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: AEDSWPKIKATGAGGQTASLHVI*SIHLLQ
Trigger: CTGAAGCAGGTGGATGCTCAAGATTACGTGCAAGGA...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAGATGGGAGGGATTCCTaGCACGTAATCTTGAGCATC +
Preference number: 5 (lower is better)
Translates to: AEDSWPKIKATGAGGQTADGRDS*HVILSI
Trigger: GATGCTCAAGATTACGTGCAAGGAATCCCTCCCATC...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATGATCTTGGTCTCTCTTaGCCCTCTGCCTCATTGAAA +
Preference number: 5 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHDLGLS*PSASLK
Trigger: TTTCAATGAGGCAGAGGGCAAAGAGAGACCAAGATC...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATCCAGACTGTCCCCTCTaGGGGAAGGTATTAAACAAA +
Preference number: 5 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHPDCPL*GKVLNK
Trigger: TTTGTTTAATACCTTCCCCAAGAGGGGACAGTCTGG...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS GCA 90 bp AAATATCAGTTCTGTCGAATAGGGCATCATCACCTCCCTCCAGTCTaGGTCATCGCGGTCCATACTCCACACCGTATTGTACATCGCGCC +
Preference number: 5 (lower is better)
Translates to: KYQFCRIGHHHLPPV*VIAVHTPHRIVHRA
Trigger: GGCGCGATGTACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTGGAGGGAGGTGATGATGCCCTATTCGACAGAACTGATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372006.5
CDS GCA 90 bp AAATATCAGTTCTGTCGAATAGGGCATCATCACCTCCCTCCAGTCTaGGTCATCGCGGTCCATACTCCACACCGTATTGTACATCGCGCG +
Preference number: 5 (lower is better)
Translates to: KYQFCRIGHHHLPPV*VIAVHTPHRIVHRA
Trigger: CGCGCGATGTACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTGGAGGGAGGTGATGATGCCCTATTCGACAGAACTGATATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420542.5
ENST00000425892.2
CDS-3UTR CAA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACCCGCGGAAGCCACTTTaGTGTCCTTCGAAGGAGGGA +
Preference number: 5 (lower is better)
Translates to: FPQAQGQASHVATGQKRYPRKPL*CPSKEG
Trigger: TCCCTCCTTCGAAGGACACAAAAGTGGCTTCCGCGG...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CAA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTCTGCCCCCACTCCATTaGCCTAGCTTCACTCAGCTG +
Preference number: 5 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGALPPLH*PSFTQL
Trigger: CAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCAG...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCAATTTCAATTGACAGTTaGGGGAAGGGATGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: AEDSWPKIKATGAGGQTAISIDS*GKGCAG
Trigger: GCCAGCACATCCCTTCCCCAAACTGTCAATTGAAAT...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACCCAGCCCCAAGCTGCTaGCATGTCAGTAGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: FPQAQGQASHVATGQKRYPAPSC*HVSSWV
Trigger: AACCCAGCTACTGACATGCAAGCAGCTTGGGGCTGG...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS GCA 90 bp AAATATCAGTTCTGTCGAATAGGGCATCATCACCTCCCTCCAGTCTaGGTCATCGCGGTCCATACTCCACACCGTATTGTACATCGCGCT +
Preference number: 5 (lower is better)
Translates to: KYQFCRIGHHHLPPV*VIAVHTPHRIVHRA
Trigger: AGCGCGATGTACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTGGAGGGAGGTGATGATGCCCTATTCGACAGAACTGATATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS-3UTR CAA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTATACTCCACACCGTATaGTACATCGCGCTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSILHTV*YIALSG
Trigger: CCCTGACAGCGCGATGTACAATACGGTGTGGAGTAT...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262741.10
CDS-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATTTTGCTATGTTGTTCTaGTGTGTGACACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHFAMLF*CVTLLF
Trigger: GAAGAGCAGTGTCACACACAAGAACAACATAGCAAA...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAAGTCATGGGCGTAGAGAAGCACCTTGCTACCCTCTCCCCCTCTACACACCAGTCTGCTTGTACTCGATaGATATCCTCAACAAACCAG +
Preference number: 5 (lower is better)
Translates to: QVMGVEKHLATLSPSTHQSACTR*ISSTNQ
Trigger: CTGGTTTGTTGAGGATATCAATCGAGTACAAGCAGA...CTGGTGTGTAGAGGGGGAGAGGGTAGCAAGGTGCTTCTCTACGCCCATGACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGAGGGCCCAAGCAGGCCCCCTATCTGGACCCTCTGGTTTCTGAGGCCACTGAATCTAAAAGCACTGCATaGCACCTTTTCTTTACTCAT +
Preference number: 5 (lower is better)
Translates to: RGPKQAPYLDPLVSEATESKSTA*HLFFTH
Trigger: ATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAGA...TTCAGTGGCCTCAGAAACCAGAGGGTCCAGATAGGGGGCCTGCTTGGGCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTATTATGGTCCCAGGATaGGCTCAGAGGCAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGAIMVPG*AQRQLD
Trigger: GTCCAGCTGCCTCTGAGCCAATCCTGGGACCATAAT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp GCAGAAGATTCCTGGCCTAAAATCAAGGCCACTGGAGCAGGAGGGCAGACTGCACTTAGAAAACAGGAATaGCCCAGGTGCAATTCTCAG +
Preference number: 5 (lower is better)
Translates to: AEDSWPKIKATGAGGQTALRKQE*PRCNSQ
Trigger: CTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAAG...TGCAGTCTGCCCTCCTGCTCCAGTGGCCTTGATTTTAGGCCAGGAATCTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTAGGAGCTAAAGCAGGTTaGAGCAGTTGGCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: YCITGASWPDCPLLGKVLGAKAG*SSWQQR
Trigger: CCTCTGCTGCCAACTGCTCAAACCTGCTTTAGCTCC...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS GCA 90 bp TATCAGGGGTTTCTGCTTTTGCATCTTCCTCATTCTCTCTTTGCCTaGTGCCATCCATGTAAGACGGGACTTGCTCCTCTCCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: YQGFLLLHLPHSLFA*CHPCKTGLAPLLAF
Trigger: GAAGGCAAGGAGAGGAGCAAGTCCCGTCTTACATGGATGGCAGCAGGCAAAGAGAGAATGAGGAAGATGCAAAAGCAGAAACCCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS-3UTR CAA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGCTCCCTGCATTTTTGTaGAGGCATCTCGGACCAAGA +
Preference number: 5 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLLPAFL*RHLGPR
Trigger: TCTTGGTCCGAGATGCCTCAACAAAAATGCAGGGAG...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCTGCCCCCACTCCATTaGCCTAGCTTCACTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDLPPLH*PSFTQL
Trigger: CAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCAG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCTGCCCCCACTCCATTaGCCTAGCTTCACTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPLPPLH*PSFTQL
Trigger: CAGCTGAGTGAAGCTAGGCAAATGGAGTGGGGGCAG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTTCCTTGCACGTAATCTaGAGCATCCACCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSSLHVI*SIHLLQ
Trigger: CTGAAGCAGGTGGATGCTCAAGATTACGTGCAAGGA...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTAGGAAACGAGGTTGTTaGCCACAAGTGGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGARKRGC*PQVAGA
Trigger: AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAGGAAACGAGGTTGTTaGCCACAAGTGGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: FPQAQGQASHVATGQKRYRKRGC*PQVAGA
Trigger: AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGCATTACTGGAGCAAGTaGGCCAGACTGTCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKHYWSK*ARLSPL
Trigger: AAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATG...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS TCA 90 bp TTTTTGCCTGGCCCATATCCATTCCCATTTCTGGTATTAGCACCCTaGTGTTCCCTGGAGGTAAGGATTCATTCCCCCGTCTCAGATCCA +
Preference number: 5 (lower is better)
Translates to: FLPGPYPFPFLVLAP*CSLEVRIHSPVSDP
Trigger: TGGATCTGAGACGGGGGAATGAATCCTTACCTCCAGGGAACATCAGGGTGCTAATACCAGAAATGGGAATGGATATGGGCCAGGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS-3UTR CAA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTACTCCCTGCATTTTTGTaGAGGCATCTCGGACCAAGA +
Preference number: 5 (lower is better)
Translates to: YCITGASWPDCPLLGKVLLPAFL*RHLGPR
Trigger: TCTTGGTCCGAGATGCCTCAACAAAAATGCAGGGAG...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGGAGCCATACAAGGTGTaGATCTCGGATCTTTCGCAG +
Preference number: 5 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKEPYKV*ISDLSQ
Trigger: CTGCGAAAGATCCGAGATCAACACCTTGTATGGCTC...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTCCTTGCACGTAATCTaGAGCATCCACCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYSLHVI*SIHLLQ
Trigger: CTGAAGCAGGTGGATGCTCAAGATTACGTGCAAGGA...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCACCAGCCCCAAGCTGCTaGCATGTCAGTAGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPPAPSC*HVSSWV
Trigger: AACCCAGCTACTGACATGCAAGCAGCTTGGGGCTGG...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGTGTAAGGAAACGAGGTaGTTTGCCACAAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKCKETR*FATSGW
Trigger: CCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACA...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp ACTTGGTCTCTCCCTGCACACCGCTGGTGTCTGCCCAACAAGGAGCAGACACATATTGCAATGTCTTTATaGCATTACTGGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: TWSLPAHRWCLPNKEQTHIAMSL*HYWSKL
Trigger: CAACTTGCTCCAGTAATGCAATAAAGACATTGCAAT...ATGTGTCTGCTCCTTGTTGGGCAGACACCAGCGGTGTGCAGGGAGAGACCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGATACTCCACACCGTATaGTACATCGCGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLILHTV*YIAPLR
Trigger: CCTCAGCGGCGCGATGTACAATACGGTGTGGAGTAT...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372006.5
CDS-3UTR CAA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTACCAACTGATCCTGTaGGTATCTGGACACTGGGTA +
Preference number: 5 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYYQLIL*VSGHWV
Trigger: TACCCAGTGTCCAGATACCAACAGGATCAGTTGGTA...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTTGCCCTCTGCCTCATaGAAACTGCAGTTAAGATGC +
Preference number: 5 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYLPSAS*KLQLRC
Trigger: GCATCTTAACTGCAGTTTCAATGAGGCAGAGGGCAA...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGGAGCTAAAGCAGGTTaGAGCAGTTGGCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: QVTAPKSHAGICKETRLFGAKAG*SSWQQR
Trigger: CCTCTGCTGCCAACTGCTCAAACCTGCTTTAGCTCC...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACCATTACTGGAGCAAGTaGGCCAGACTGTCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDHYWSK*ARLSPL
Trigger: AAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATG...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCATTACTGGAGCAAGTaGGCCAGACTGTCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SQVTAPKSHAGICKETRLHYWSK*ARLSPL
Trigger: AAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS TCA 90 bp ATCCTGAAGAGAAACAGAACTGTCCTTCATTCCATTTGGAACTGCTaGAGTCATTGGCTTAGGTGGCTTTGGTGGAAGAGCTGGAGGATC +
Preference number: 5 (lower is better)
Translates to: ILKRNRTVLHSIWNC*SHWLRWLWWKSWRI
Trigger: GATCCTCCAGCTCTTCCACCAAAGCCACCTAAGCCAATGACTTCAGCAGTTCCAAATGGAATGAAGGACAGTTCTGTTTCTCTTCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000425892.2
CDS TCA 90 bp ATCCTGAAGAGAAACAGAACTGTCCTTCATTCCATTTGGAACTGCTaGAGTCATTGGCTTAGGTGGCTTTGGTGGAAGAGCGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: ILKRNRTVLHSIWNC*SHWLRWLWWKSGIL
Trigger: CAGAATCCCGCTCTTCCACCAAAGCCACCTAAGCCAATGACTTCAGCAGTTCCAAATGGAATGAAGGACAGTTCTGTTTCTCTTCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493202.1
CDS GCA 90 bp TCACTTCCCCATCGGCCACCACAGAGCAAGCATAGCATCCTTTCTTaGTACTCTCACGAATTAAGAATGCACCATCAGGTTTCCCATAAA +
Preference number: 5 (lower is better)
Translates to: SLPHRPPQSKHSILS*YSHELRMHHQVSHK
Trigger: TTTATGGGAAACCTGATGGTGCATTCTTAATTCGTGAGAGTAGCAAGAAAGGATGCTATGCTTGCTCTGTGGTGGCCGATGGGGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000488808.1
CDS-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCTCCCTGCATTTTTGTaGAGGCATCTCGGACCAAGA +
Preference number: 5 (lower is better)
Translates to: SQVTAPKSHAGICKETRLLPAFL*RHLGPR
Trigger: TCTTGGTCCGAGATGCCTCAACAAAAATGCAGGGAG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACAAGCAAGTCCTCTGCTaGTACTCGATTGATATCCTC +
Preference number: 5 (lower is better)
Translates to: FPQAQGQASHVATGQKRYKQVLC*YSIDIL
Trigger: GAGGATATCAATCGAGTACAAGCAGAGGACTTGCTT...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCTCCTCTCGCCTTTCCCCCTACCCTCCCCAACAATTGCACAGCAATGTCTGAATCTAAAAGCACTGCATaGCACCTTTTCTTTACTCAT +
Preference number: 5 (lower is better)
Translates to: SPLAFPPTLPNNCTAMSESKSTA*HLFFTH
Trigger: ATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAGA...TTCAGACATTGCTGTGCAATTGTTGGGGAGGGTAGGGGGAAAGGCGAGAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGGATGGGAGGGATTCCTaGCACGTAATCTTGAGCATC +
Preference number: 5 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLDGRDS*HVILSI
Trigger: GATGCTCAAGATTACGTGCAAGGAATCCCTCCCATC...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGGATGGGAGGGATTCCTaGCACGTAATCTTGAGCATC +
Preference number: 5 (lower is better)
Translates to: SQVTAPKSHAGICKETRLDGRDS*HVILSI
Trigger: GATGCTCAAGATTACGTGCAAGGAATCCCTCCCATC...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCCCGTGGAAGACACATaGGCTCTCAAAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPPVEDT*ALKASS
Trigger: TGAAGAAGCTTTGAGAGCCAATGTGTCTTCCACGGG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGCCCGTGGAAGACACATaGGCTCTCAAAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLPVEDT*ALKASS
Trigger: TGAAGAAGCTTTGAGAGCCAATGTGTCTTCCACGGG...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACCTTAGAAAACAGGAATaGCCCAGGTGCAATTCTCAG +
Preference number: 5 (lower is better)
Translates to: FPQAQGQASHVATGQKRYLRKQE*PRCNSQ
Trigger: CTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAAG...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACGAGGCCTACTCTGGGTaGTTAAATAGCAGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDEAYSG*LNSSRD
Trigger: GTCTCTGCTGCTATTTAACAACCCAGAGTAGGCCTC...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTATACTCCACACCGTATaGTACATCGCGCGGGATTCT +
Preference number: 5 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPILHTV*YIARDS
Trigger: AGAATCCCGCGCGATGTACAATACGGTGTGGAGTAT...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS-3UTR CAA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCTTGCCCTCTGCCTCATaGAAACTGCAGTTAAGATGC +
Preference number: 5 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSLPSAS*KLQLRC
Trigger: GCATCTTAACTGCAGTTTCAATGAGGCAGAGGGCAA...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAGAGGCCTACTCTGGGTaGTTAAATAGCAGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPEAYSG*LNSSRD
Trigger: GTCTCTGCTGCTATTTAACAACCCAGAGTAGGCCTC...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTGTAAGGAAACGAGGTaGTTTGCCACAAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: QVTAPKSHAGICKETRLFCKETR*FATSGW
Trigger: CCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCCAGACTGTCCCCTCTaGGGGAAGGTATTAAACAAA +
Preference number: 5 (lower is better)
Translates to: SQVTAPKSHAGICKETRLPDCPL*GKVLNK
Trigger: TTTGTTTAATACCTTCCCCAAGAGGGGACAGTCTGG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTCCAGACTGTCCCCTCTaGGGGAAGGTATTAAACAAA +
Preference number: 5 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPPDCPL*GKVLNK
Trigger: TTTGTTTAATACCTTCCCCAAGAGGGGACAGTCTGG...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS TCA 90 bp CACCATCAGGTTTCCCATAAAGCAAGTCCTCTGCTTGTACTCGATTaGTATCCTCAACAAACCAGGTTTTCTCATCATAATGGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: HHQVSHKASPLLVLD*YPQQTRFSHHNGAG
Trigger: ACCTGCCCCATTATGATGAGAAAACCTGGTTTGTTGAGGATATCAATCGAGTACAAGCAGAGGACTTGCTTTATGGGAAACCTGATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000488808.1
CDS-3UTR CAA 90 bp AGCAGCCCTTCTCCACAAGCCAGCCCAAGTGTAGATAAAGATGGTACTTGGTCTATATTCTTTGCTATGTaGTTCTTGTGTGTGACACTG +
Preference number: 5 (lower is better)
Translates to: SSPSPQASPSVDKDGTWSIFFAM*FLCVTL
Trigger: CAGTGTCACACACAAGAACAACATAGCAAAGAATAT...AGACCAAGTACCATCTTTATCTACACTTGGGCTGGCTTGTGGAGAAGGGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGATATTCTTTGCTATGTaGTTCTTGTGTGTGACACTG +
Preference number: 5 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLIFFAM*FLCVTL
Trigger: CAGTGTCACACACAAGAACAACATAGCAAAGAATAT...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGAAGCAAGTCCTCTGCTaGTACTCGATTGATATCCTC +
Preference number: 5 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLKQVLC*YSIDIL
Trigger: GAGGATATCAATCGAGTACAAGCAGAGGACTTGCTT...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGGGTTCTCTAGCCAGGGGTATAATGAACCCCTCTGATCTTGGTCTCTCTTTGTGGCAACAAACTGTTTaGTTGGCTTCTGAACATAAT +
Preference number: 5 (lower is better)
Translates to: LGSLARGIMNPSDLGLSLWQQTV*LASEHN
Trigger: ATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCA...CAAAGAGAGACCAAGATCAGAGGGGTTCATTATACCCCTGGCTAGAGAACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTATTTTCCCATCAAACATaGGTCTGGCAACAAACTGTT +
Preference number: 5 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLFSHQT*VWQQTV
Trigger: AACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAA...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCAGCTGGAAGGCTTAAGCCACATGGAGCAGAAGATTCCTGGCCTAAAATCAAGTTTTCCCATCAAACATaGGTCTGGCAACAAACTGTT +
Preference number: 5 (lower is better)
Translates to: SAGRLKPHGAEDSWPKIKFSHQT*VWQQTV
Trigger: AACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAA...CTTGATTTTAGGCCAGGAATCTTCTGCTCCATGTGGCTTAAGCCTTCCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTTGCCCTCTGCCTCATaGAAACTGCAGTTAAGATGC +
Preference number: 5 (lower is better)
Translates to: QVTAPKSHAGICKETRLFLPSAS*KLQLRC
Trigger: GCATCTTAACTGCAGTTTCAATGAGGCAGAGGGCAA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGCTTAGAAAACAGGAATaGCCCAGGTGCAATTCTCAG +
Preference number: 5 (lower is better)
Translates to: SQVTAPKSHAGICKETRLLRKQE*PRCNSQ
Trigger: CTGAGAATTGCACCTGGGCAATTCCTGTTTTCTAAG...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS TCA 90 bp AATAAGAATATTCCACTCTATCCCATCCCTACCCTCAGGCCACAGTaGCGGTTCAGGAATAGGAATAAAACTCAAACTGACCCAATGAGA +
Preference number: 5 (lower is better)
Translates to: NKNIPLYPIPTLRPQ*RFRNRNKTQTDPMR
Trigger: TCTCATTGGGTCAGTTTGAGTTTTATTCCTATTCCTGAACCGTCACTGTGGCCTGAGGGTAGGGATGGGATAGAGTGGAATATTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS-3UTR CAA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTGTCCTTCATTCCATTaGGAACTGCTGAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDCPSFH*ELLKSL
Trigger: CAATGACTTCAGCAGTTCCAAATGGAATGAAGGACA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTTTGCTATGTTGTTCTaGTGTGTGACACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDFAMLF*CVTLLF
Trigger: GAAGAGCAGTGTCACACACAAGAACAACATAGCAAA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AGCTTCCAGATGGCTTCTACTAACAGTCTAAACACTAAGCCATCTTCTCTCCCTTCTGCTTGTACTCGATaGATATCCTCAACAAACCAG +
Preference number: 5 (lower is better)
Translates to: SFQMASTNSLNTKPSSLPSACTR*ISSTNQ
Trigger: CTGGTTTGTTGAGGATATCAATCGAGTACAAGCAGA...AGGGAGAGAAGATGGCTTAGTGTTTAGACTGTTAGTAGAAGCCATCTGGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCTCTGCTTGTACTCGATaGATATCCTCAACAAACCAG +
Preference number: 5 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSSACTR*ISSTNQ
Trigger: CTGGTTTGTTGAGGATATCAATCGAGTACAAGCAGA...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCAACAAGGAGCAGACACATTACTGAATACTACAGCCCTGTATCTGTATTTCCAAAGCAAGTCCTCTGCTaGTACTCGATTGATATCCTC +
Preference number: 5 (lower is better)
Translates to: PTRSRHITEYYSPVSVFPKQVLC*YSIDIL
Trigger: GAGGATATCAATCGAGTACAAGCAGAGGACTTGCTT...TGGAAATACAGATACAGGGCTGTAGTATTCAGTAATGTGTCTGCTCCTTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTCACAAAATCACTTCTaGTGCAAAACAAGCAGTCTA +
Preference number: 5 (lower is better)
Translates to: FPQAQGQASHVATGQKRYSQNHF*CKTSSL
Trigger: TAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTATCACAAAATCACTTCTaGTGCAAAACAAGCAGTCTA +
Preference number: 5 (lower is better)
Translates to: YCITGASWPDCPLLGKVLSQNHF*CKTSSL
Trigger: TAGACTGCTTGTTTTGCACAAGAAGTGATTTTGTGA...TAATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTCCACAGGCTCAGGGTCAAGCAAGTCATGTGGCAACTGGTCAGAAAAGATACTGGCAACAAACTGTTTaGTTGGCTTCTGAACATAAT +
Preference number: 5 (lower is better)
Translates to: FPQAQGQASHVATGQKRYWQQTV*LASEHN
Trigger: ATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCA...GTATCTTTTCTGACCAGTTGCCACATGACTTGCTTGACCCTGAGCCTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TTTATTGCATTACTGGAGCAAGTTGGCCAGACTGTCCCCTCTTGGGGAAGGTATTGGCAACAAACTGTTTaGTTGGCTTCTGAACATAAT +
Preference number: 5 (lower is better)
Translates to: FIALLEQVGQTVPSWGRYWQQTV*LASEHN
Trigger: ATTATGTTCAGAAGCCAACAAAACAGTTTGTTGCCA...ATACCTTCCCCAAGAGGGGACAGTCTGGCCAACTTGCTCCAGTAATGCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp AACACCAGGTGCAAAGCCATCCAGGTGTGCCCAACAGCAATTAGCTTGGTATTAACTACACGAATTTTCTaGGACACATCAAAGACAACA +
Preference number: 5 (lower is better)
Translates to: NTRCKAIQVCPTAISLVLTTRIF*DTSKTT
Trigger: TGTTGTCTTTGATGTGTCCAAGAAAATTCGTGTAGT...TAATACCAAGCTAATTGCTGTTGGGCACACCTGGATGGCTTTGCACCTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTGCCACAAGTGGCTGGAGCTACTACACGAATTTTCTaGGACACATCAAAGACAACA +
Preference number: 5 (lower is better)
Translates to: HMLEFVRKRGCLPQVAGATTRIF*DTSKTT
Trigger: TGTTGTCTTTGATGTGTCCAAGAAAATTCGTGTAGT...AGCTCCAGCCACTTGTGGCAAACAACCTCGTTTCCTTACAAATTCCAGCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTTTTTTGCTATGTTGTTCTaGTGTGTGACACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QVTAPKSHAGICKETRLFFAMLF*CVTLLF
Trigger: GAAGAGCAGTGTCACACACAAGAACAACATAGCAAA...AAACAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CTGCAAAAGCTTCAGAAACCACTGTATGGAAGCACATGTGTAATGTGGTGTGACTTTTCCCATCAAACATaGGTCTGGCAACAAACTGTT +
Preference number: 5 (lower is better)
Translates to: LQKLQKPLYGSTCVMWCDFSHQT*VWQQTV
Trigger: AACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAA...GTCACACCACATTACACATGTGCTTCCATACAGTGGTTTCTGAAGCTTTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CCACGTTTTCCCATCAAACATTGGTCTGGCAACAAACTGTTTTGTTGGCTTCTGTTTATTAACTTATTATaGCCTCCCTTCCGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: PRFPIKHWSGNKLFCWLLFINLL*PPFRKV
Trigger: GACTTTGCGGAAGGGAGGCAATAATAAGTTAATAAA...CAGAAGCCAACAAAACAGTTTGTTGCCAGACCAATGTTTGATGGGAAAACGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGTCTAAAAGCACTGCATaGCACCTTTTCTTTACTCAT +
Preference number: 5 (lower is better)
Translates to: SQVTAPKSHAGICKETRLSKSTA*HLFFTH
Trigger: ATGAGTAAAGAAAAGGTGCAATGCAGTGCTTTTAGA...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp TCACAAGTAACGGCACCAAAGTCACATGCTGGAATTTGTAAGGAAACGAGGTTGACTACACGAATTTTCTaGGACACATCAAAGACAACA +
Preference number: 5 (lower is better)
Translates to: SQVTAPKSHAGICKETRLTTRIF*DTSKTT
Trigger: TGTTGTCTTTGATGTGTCCAAGAAAATTCGTGTAGT...CAACCTCGTTTCCTTACAAATTCCAGCATGTGACTTTGGTGCCGTTACTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS-3UTR CAA 90 bp CAGAGAAACAGGCAGGAAGGACAGAAGGGGTTAGTTACAGTGATCAATTTTAGCATTGCAATGTCTTTATaGCATTACTGGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: QRNRQEGQKGLVTVINFSIAMSL*HYWSKL
Trigger: CAACTTGCTCCAGTAATGCAATAAAGACATTGCAAT...GCTAAAATTGATCACTGTAACTAACCCCTTCTGTCCTTCCTGCCTGTTTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS TCA 90 bp TGGGCCCTGAATCCAGCAATGACTGAACAAGTAAAGCTATACATTTaGTATTCCAGAGGTAGCATAACACAACAGTTAAGAACAATGGTT +
Preference number: 5 (lower is better)
Translates to: WALNPAMTEQVKLYI*YSRGSITQQLRTMV
Trigger: AACCATTGTTCTTAACTGTTGTGTTATGCTACCTCTGGAATATCAAATGTATAGCTTTACTTGTTCAGTCATTGCTGGATTCAGGGCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS-3UTR CAA 90 bp ACACATCAAAGACAACAGAATAGATTTTTCACAAGTAACGGCACCAAAGTCACAATTGCAATGTCTTTATaGCATTACTGGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: THQRQQNRFFTSNGTKVTIAMSL*HYWSKL
Trigger: CAACTTGCTCCAGTAATGCAATAAAGACATTGCAAT...TGTGACTTTGGTGCCGTTACTTGTGAAAAATCTATTCTGTTGTCTTTGATGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
CDS GCA 72 bp GTACGATCCGGGCGCTGGCCGCACTCCAGGAGTCAGTaGCGGGAGCACGCGAGCCAGGCGAGGAGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: VRSGRWPHSRSQ*REHASQARREW
Trigger: CCACTCCCTCCTCGCCTGGCTCGCGTGCTCCCGGCACTGACTCCTGGAGTGCGGCCAGCGCCCGGATCGTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS GCA 72 bp CTCGGGCTCCTCTCCGGTCGGTCTCGGAACCGAAGCTaGCGCAGCCTCGGGAATGGGGCCGGCCGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: LGLLSGRSRNRS*RSLGNGAGRRS
Trigger: ACTTCTCCGGCCGGCCCCATTCCCGAGGCTGCGGCAGCTTCGGTTCCGAGACCGACCGGAGAGGAGCCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CAA 90 bp CAGCCTCGGGAATGGGGCCGGCCGGAGAAGTCCAGTCAGCTCGGCTaGTCTGGGCGCTCCCGCCGGGGTGTAAGAACCAACCCGACCGCA +
Preference number: 6 (lower is better)
Translates to: QPREWGRPEKSSQLG*SGRSRRGVRTNPTA
Trigger: TGCGGTCGGGTTGGTTCTTACACCCCGGCGGGAGCGCCCAGACAAGCCGAGCTGACTGGACTTCTCCGGCCGGCCCCATTCCCGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CCA 72 bp GGGCCGGCCGGAGAAGTCCAGTCAGCTCGGCTTGTCTaGGCGCTCCCGCCGGGGTGTAAGAACCAACCCGAC +
Preference number: 6 (lower is better)
Translates to: GPAGEVQSARLV*ALPPGCKNQPD
Trigger: GTCGGGTTGGTTCTTACACCCCGGCGGGAGCGCCCAGACAAGCCGAGCTGACTGGACTTCTCCGGCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CCA 72 bp TCGGTCTCGGAACCGAAGCTGCCGCAGCCTCGGGAATaGGGCCGGCCGGAGAAGTCCAGTCAGCTCGGCTTG +
Preference number: 6 (lower is better)
Translates to: SVSEPKLPQPRE*GRPEKSSQLGL
Trigger: CAAGCCGAGCTGACTGGACTTCTCCGGCCGGCCCCATTCCCGAGGCTGCGGCAGCTTCGGTTCCGAGACCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CCA 72 bp CCCCCAGCCTCAATCAGAATGGTACGATCCGGGCGCTaGCCGCACTCCAGGAGTCAGTGCCGGGAGCACGCG +
Preference number: 6 (lower is better)
Translates to: PPASIRMVRSGR*PHSRSQCREHA
Trigger: CGCGTGCTCCCGGCACTGACTCCTGGAGTGCGGCCAGCGCCCGGATCGTACCATTCTGATTGAGGCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS CAA 72 bp GAATGGGGCCGGCCGGAGAAGTCCAGTCAGCTCGGCTaGTCTGGGCGCTCCCGCCGGGGTGTAAGAACCAAC +
Preference number: 6 (lower is better)
Translates to: EWGRPEKSSQLG*SGRSRRGVRTN
Trigger: GTTGGTTCTTACACCCCGGCGGGAGCGCCCAGACAAGCCGAGCTGACTGGACTTCTCCGGCCGGCCCCATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CCA 72 bp TCAGCCATCCGCGCTCTCCCCCAGCCTCAATCAGAATaGTACGATCCGGGCGCTGGCCGCACTCCAGGAGTC +
Preference number: 6 (lower is better)
Translates to: SAIRALPQPQSE*YDPGAGRTPGV
Trigger: GACTCCTGGAGTGCGGCCAGCGCCCGGATCGTACCATTCTGATTGAGGCTGGGGGAGAGCGCGGATGGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420542.5
CDS CAA 72 bp CAGTCTGCGTCATCGCGGTCCATACTCCACACCGTATaGTACATCGCGCCGCTGAGGCGCCACCCAACCGCG +
Preference number: 6 (lower is better)
Translates to: QSASSRSILHTV*YIAPLRRHPTA
Trigger: CGCGGTTGGGTGGCGCCTCAGCGGCGCGATGTACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372006.5
CDS GCA 72 bp TGGAGATTGCGTTCAAGTTTCGGGGTCCCACTGGTCTaGAGAGAGCGAATCCCCCAGAGGCCGGGACTCGGG +
Preference number: 6 (lower is better)
Translates to: WRLRSSFGVPLV*RERIPQRPGLG
Trigger: CCCGAGTCCCGGCCTCTGGGGGATTCGCTCTCTGCAGACCAGTGGGACCCCGAAACTTGAACGCAATCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CAA 72 bp CAGTCTGCGTCATCGCGGTCCATACTCCACACCGTATaGTACATCGCGCTGTCAGGGGCAGGTCGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: QSASSRSILHTV*YIALSGAGRQE
Trigger: CTCCTGGCGACCTGCCCCTGACAGCGCGATGTACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CAA 90 bp ACCTCCCTCCAGTCTGCGTCATCGCGGTCCATACTCCACACCGTATaGTACATCGCGCTGTCAGGGGCAGGTCGCCAGGAGATATATAGA +
Preference number: 6 (lower is better)
Translates to: TSLQSASSRSILHTV*YIALSGAGRQEIYR
Trigger: TCTATATATCTCCTGGCGACCTGCCCCTGACAGCGCGATGTACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTGGAGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262741.10
ENST00000423209.5
CDS CAA 72 bp CAGTCTGCGTCATCGCGGTCCATACTCCACACCGTATaGTACATCGCGCGGGATTCTGTCAAGTGCCTGAGA +
Preference number: 6 (lower is better)
Translates to: QSASSRSILHTV*YIARDSVKCLR
Trigger: TCTCAGGCACTTGACAGAATCCCGCGCGATGTACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420542.5
ENST00000425892.2
CDS CAA 90 bp TCTTTGCCTGCTGCCATCCATGTAAGACGGGACTTGCTCCTCTCCTaGCCTTCCACCATGATTGTGAGGCTTCCCAAGCCACGTGGAACT +
Preference number: 6 (lower is better)
Translates to: SLPAAIHVRRDLLLS*PSTMIVRLPKPRGT
Trigger: AGTTCCACGTGGCTTGGGAAGCCTCACAATCATGGTGGAAGGCAAGGAGAGGAGCAAGTCCCGTCTTACATGGATGGCAGCAGGCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS GCA 72 bp TTCTGTCGAATAGGGCATCATCACCTCCCTCCAGTCTaGGTCATCGCGGTCCATACTCCACACCGTATTGTA +
Preference number: 6 (lower is better)
Translates to: FCRIGHHHLPPV*VIAVHTPHRIV
Trigger: TACAATACGGTGTGGAGTATGGACCGCGATGACGCAGACTGGAGGGAGGTGATGATGCCCTATTCGACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000425892.2
CDS TCA 72 bp GGCCCATATCCATTCCCATTTCTGGTATTAGCACCCTaGTGTTCCCTGGAGGTAAGGATTCATTCCCCCGTC +
Preference number: 6 (lower is better)
Translates to: GPYPFPFLVLAP*CSLEVRIHSPV
Trigger: GACGGGGGAATGAATCCTTACCTCCAGGGAACATCAGGGTGCTAATACCAGAAATGGGAATGGATATGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS TCA 72 bp CCGTATTGTACATCGCGCGGGATTCTGTCAAGTGCCTaGGAACATGTTCAAAAAGCTGCTCTCCATCTCGAC +
Preference number: 6 (lower is better)
Translates to: PYCTSRGILSSA*EHVQKAALHLD
Trigger: GTCGAGATGGAGAGCAGCTTTTTGAACATGTTCTCAGGCACTTGACAGAATCCCGCGCGATGTACAATACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420542.5
ENST00000425892.2
CDS TCA 72 bp TGGCTTTGGTGGAAGAGCGGGATTCTGTCAAGTGCCTaGGAACATGTTCAAAAAGCTGCTCTCCATCTCGAC +
Preference number: 6 (lower is better)
Translates to: WLWWKSGILSSA*EHVQKAALHLD
Trigger: GTCGAGATGGAGAGCAGCTTTTTGAACATGTTCTCAGGCACTTGACAGAATCCCGCTCTTCCACCAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493202.1
CDS GCA 72 bp GATTCTGTCAAGTGCCTGAGAACATGTTCAAAAAGCTaGTCTCCATCTCGACTTTCACGTCTCCCCACCGCT +
Preference number: 6 (lower is better)
Translates to: DSVKCLRTCSKS*SPSRLSRLPTA
Trigger: AGCGGTGGGGAGACGTGAAAGTCGAGATGGAGAGCAGCTTTTTGAACATGTTCTCAGGCACTTGACAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420542.5
ENST00000425892.2
ENST00000493202.1
CDS GCA 72 bp CTCATCCCAGCAGCTATACTGTCACTTCACCGGCAATaGCTGCCTGAGGATAAAATCAACCCAGAGAAAAAC +
Preference number: 6 (lower is better)
Translates to: LIPAAILSLHRQ*LPEDKINPEKN
Trigger: GTTTTTCTCTGGGTTGATTTTATCCTCAGGCAGGCATTGCCGGTGAAGTGACAGTATAGCTGCTGGGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS CCA 72 bp ATTCCCCCGTCTCAGATCCAGGGATGGAAACACACATaGCCCAGACTGGCCAATAAGAATATTCCACTCTAT +
Preference number: 6 (lower is better)
Translates to: IPPSQIQGWKHT*PRLANKNIPLY
Trigger: ATAGAGTGGAATATTCTTATTGGCCAGTCTGGGCCATGTGTGTTTCCATCCCTGGATCTGAGACGGGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS TCA 72 bp ATTCCACTCTATCCCATCCCTACCCTCAGGCCACAGTaGCGGTTCAGGAATAGGAATAAAACTCAAACTGAC +
Preference number: 6 (lower is better)
Translates to: IPLYPIPTLRPQ*RFRNRNKTQTD
Trigger: GTCAGTTTGAGTTTTATTCCTATTCCTGAACCGTCACTGTGGCCTGAGGGTAGGGATGGGATAGAGTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS TCA 72 bp AGAAACAGAACTGTCCTTCATTCCATTTGGAACTGCTaGAGTCATTGGCTTAGGTGGCTTTGGTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: RNRTVLHSIWNC*SHWLRWLWWKS
Trigger: GCTCTTCCACCAAAGCCACCTAAGCCAATGACTTCAGCAGTTCCAAATGGAATGAAGGACAGTTCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000425892.2
ENST00000493202.1
CDS GCA 72 bp ATGGTTTTGCAATTAGCCTACCTACATCTGAATCTCTaGTGTCACTTGCTGTGGGGCCATGGGCAAGTTATT +
Preference number: 6 (lower is better)
Translates to: MVLQLAYLHLNL*CHLLWGHGQVI
Trigger: AATAACTTGCCCATGGCCCCACAGCAAGTGACAGCAGAGATTCAGATGTAGGTAGGCTAATTGCAAAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS GCA 72 bp GAATGCACCATCAGGTTTCCCATAAAGCAAGTCCTCTaGTTGTACTCGATTGATATCCTCAACAAACCAGGT +
Preference number: 6 (lower is better)
Translates to: ECTIRFPIKQVL*LYSIDILNKPG
Trigger: ACCTGGTTTGTTGAGGATATCAATCGAGTACAAGCAGAGGACTTGCTTTATGGGAAACCTGATGGTGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000488808.1
CDS CCA 72 bp ATCTGGACACTGGGTACATCAGCTTCACATCAAGTTTaGGATTGTACTGAGCAAGAGATTCATGGTGATAGT +
Preference number: 6 (lower is better)
Translates to: IWTLGTSASHQV*DCTEQEIHGDS
Trigger: ACTATCACCATGAATCTCTTGCTCAGTACAATCCCAAACTTGATGTGAAGCTGATGTACCCAGTGTCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000425892.2
ENST00000493202.1
CDS CAA 72 bp TGCACCATCAGGTTTCCCATAAAGCAAGTCCTCTGCTaGTACTCGATTGATATCCTCAACAAACCAGGTTTT +
Preference number: 6 (lower is better)
Translates to: CTIRFPIKQVLC*YSIDILNKPGF
Trigger: AAAACCTGGTTTGTTGAGGATATCAATCGAGTACAAGCAGAGGACTTGCTTTATGGGAAACCTGATGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000488808.1
CDS TCA 72 bp GTTTCCCATAAAGCAAGTCCTCTGCTTGTACTCGATTaGTATCCTCAACAAACCAGGTTTTCTCATCATAAT +
Preference number: 6 (lower is better)
Translates to: VSHKASPLLVLD*YPQQTRFSHHN
Trigger: ATTATGATGAGAAAACCTGGTTTGTTGAGGATATCAATCGAGTACAAGCAGAGGACTTGCTTTATGGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000423209.5
ENST00000488808.1
CDS GCA 72 bp AAGCTTGATTCTTCAAATCCTGCTCTAGACGCATTTTaGTATCATGAATCTCACCCAGACGTGATTTCAATT +
Preference number: 6 (lower is better)
Translates to: KLDSSNPALDAF*YHESHPDVISI
Trigger: AATTGAAATCACGTCTGGGTGAGATTCATGATAGCAAAATGCGTCTAGAGCAGGATTTGAAGAATCAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262741.10
ENST00000372006.5
ENST00000420542.5
ENST00000488808.1
CDS TCA 72 bp GGTTCAGGAATAGGAATAAAACTCAAACTGACCCAATaGGAGTCAATTCTAGAACATTTGCTAGAACTGTAT +
Preference number: 6 (lower is better)
Translates to: GSGIGIKLKLTQ*ESILEHLLELY
Trigger: ATACAGTTCTAGCAAATGTTCTAGAATTGACTCTCATTGGGTCAGTTTGAGTTTTATTCCTATTCCTGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS TCA 72 bp AATCCAGCAATGACTGAACAAGTAAAGCTATACATTTaGTATTCCAGAGGTAGCATAACACAACAGTTAAGA +
Preference number: 6 (lower is better)
Translates to: NPAMTEQVKLYI*YSRGSITQQLR
Trigger: TCTTAACTGTTGTGTTATGCTACCTCTGGAATATCAAATGTATAGCTTTACTTGTTCAGTCATTGCTGGATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488808.1
CDS TCA 72 bp AATAAATTCTCTCTTTCCACACAAATTGCTAAATTATaGATATGCAGTTCTCATCCCAGCAGCTATACTGTC +
Preference number: 6 (lower is better)
Translates to: NKFSLSTQIAKL*ICSSHPSSYTV
Trigger: GACAGTATAGCTGCTGGGATGAGAACTGCATATTCATAATTTAGCAATTTGTGTGGAAAGAGAGAATTTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488808.1