RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3R2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105647

Ensembl transcript IDs: ENST00000222254.13, ENST00000426902.5, ENST00000459743.2, ENST00000464016.3, ENST00000474310.1, ENST00000600533.2, ENST00000617130.5, ENST00000617642.2, ENST00000672815.1, ENST00000674682.1, ENST00000675271.1

Found 817 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTGGTCCGTaGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGCCCAGGGGCG +
Preference number: 1 (lower is better)
Translates to: RAGEMRTPGCGWSGP*LPPPQPPAQTGPGA
Trigger: CGCCCCTGGGCCCGTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CCA 90 bp AAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTaGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGCCC +
Preference number: 1 (lower is better)
Translates to: KSQSRRNEDPWMWLV*SVAPAAAASGADGP
Trigger: GGGCCCGTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CCA 90 bp CAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTaGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACG +
Preference number: 1 (lower is better)
Translates to: QTRARAGEMRTPGCG*SGPWLPPPQPPAQT
Trigger: CGTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCA +
Preference number: 1 (lower is better)
Translates to: TPNKSQSRRNEDPWM*LVWSVAPAAAASGA
Trigger: TGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CCA 90 bp GAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTaGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCC +
Preference number: 1 (lower is better)
Translates to: ERTPNKSQSRRNEDP*MWLVWSVAPAAAAS
Trigger: GGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR GCA 90 bp CGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGAC +
Preference number: 1 (lower is better)
Translates to: RLSISLLSEAWARSC*SSFVRLSWISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 90 bp ATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGG +
Preference number: 1 (lower is better)
Translates to: MRLSISLLSEAWARS*CSSFVRLSWISAMR
Trigger: CCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CCA 90 bp GCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCC +
Preference number: 1 (lower is better)
Translates to: ACVRLILPTYQVRSS*CGRSSSSSMSAYWS
Trigger: GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CCA 90 bp TTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCCAGCTTCGTGCGGCTCTCATGGATC +
Preference number: 1 (lower is better)
Translates to: LRLFMRLSISLLSEA*ARSCCSSFVRLSWI
Trigger: GATCCATGAGAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 90 bp TGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCA +
Preference number: 1 (lower is better)
Translates to: CVRLILPTYQVRSSW*GRSSSSSMSAYWSS
Trigger: TGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR TCA 90 bp GCTCCAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGT +
Preference number: 1 (lower is better)
Translates to: APASCGSHGSRQCGT*AARSSAGSFASLSR
Trigger: ACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 90 bp AGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCCACTCGTT +
Preference number: 1 (lower is better)
Translates to: SAFLVVREIVLVLHE*VLVLSLIFNPQPLV
Trigger: AACGAGTGGCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 90 bp CTTGTCCTGGTACTGCTGGTGATAGACCTTAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTTGACAATCTGGTCCTGCTGGTATTT +
Preference number: 1 (lower is better)
Translates to: LVLVLLVIDLKLGAH*LHAVLLDNLVLLVF
Trigger: AAATACCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTTAAGGTCTATCACCAGCAGTACCAGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR GCA 90 bp ATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGGCGCAGCTCAGCACCTCCTGGGACT +
Preference number: 1 (lower is better)
Translates to: ILIVSLKASIAVRFI*SSWRRGRSSAPPGT
Trigger: AGTCCCAGGAGGTGCTGAGCTGCGCCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR TCA 90 bp GTAGTGATTGATGAGGTCCACAACGGAGCAGAAGGTGAGTGGCTCTaGGAAGCCATAGTGCCCATCTCGGTGGAAGACCTTGATCAGCTT +
Preference number: 1 (lower is better)
Translates to: VVIDEVHNGAEGEWL*EAIVPISVEDLDQL
Trigger: AAGCTGATCAAGGTCTTCCACCGAGATGGGCACTATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTGTGGACCTCATCAATCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCGCCCAGGGGCGGCTCTaGTTGGGGCGGGTCCTCGGT +
Preference number: 2 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCAQGRL*LGRVLG
Trigger: ACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGC...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGGAAGTTGGAGTCTGTaGGGCGGGTCCCGCCCGGCC +
Preference number: 2 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQGSWSL*GGSRPA
Trigger: GGCCGGGCGGGACCCGCCCCACAGACTCCAACTTCC...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTTTTTCGGGGGTGGGTaGACTTCTCGCAGCGGCCCC +
Preference number: 2 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCFFGGG*TSRSGP
Trigger: GGGGCCGCTGCGAGAAGTTCACCCACCCCCGAAAAA...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCT +
Preference number: 2 (lower is better)
Translates to: GPGAALLGAGPRCSAGGREDPWM*LVWSVA
Trigger: AGCCACGGACCAGACCAGCCACATCCAGGGGTCCTC...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCCCATTTTGGCCAGGCTaGCCTCCAACTCCCGACCTC +
Preference number: 2 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCPFWPG*PPTPDL
Trigger: GAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGG...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTGCCCAGGGGCGGCTCTaGTTGGGGCGGGTCCTCGGT +
Preference number: 2 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLAAQGRL*LGRVLG
Trigger: ACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGC...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 2 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGAGACAGAGGGAGATCTaGAGAATGGGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: GPGAALLGAGPRCSAGGRRQREI*RMGEGR
Trigger: CCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCT...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAG +
Preference number: 2 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRLPACG*SCPRTK
Trigger: CTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAG...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGATGCCCACGTACCAAGTaGGTTCCTCGTGGTGCGGGA +
Preference number: 2 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRCPRTK*VPRGAG
Trigger: TCCCGCACCACGAGGAACGCACTTGGTACGTGGGCA...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGGGCTGGTCTGGTCCGTaGCTCCCGCCGCCGCAGCCT +
Preference number: 2 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRGWSGP*LPPPQP
Trigger: AGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCC...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAAGCCTCCCAAGTAGCTaGGATTACAGGCGGCCGCCA +
Preference number: 2 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRSLPSS*DYRRPP
Trigger: TGGCGGCCGCCTGTAATCCCAGCTACTTGGGAGGCT...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRSHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTTGGATGTGGCTGGTCTaGTCCGTGGCTCCCGCCGCC +
Preference number: 2 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVWMWLV*SVAPAA
Trigger: GGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGGCCCAGGGGCGGCTCTaGTTGGGGCGGGTCCTCGGT +
Preference number: 2 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWAQGRL*LGRVLG
Trigger: ACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGC...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 2 (lower is better)
Translates to: RLFMRLSISLLSEAWARSWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp TTCTTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGG +
Preference number: 2 (lower is better)
Translates to: FFCRAPFWVSHTRYWSRIAWARS*CSSFVR
Trigger: CCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGC...GATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGGGCTGGTCTGGTCCGTaGCTCCCGCCGCCGCAGCCT +
Preference number: 2 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWGWSGP*LPPPQP
Trigger: AGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCC...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTGGCTGGTCTGGTCCGTaGCTCCCGCCGCCGCAGCCT +
Preference number: 2 (lower is better)
Translates to: AGSFASLSRCPHAGSAPGGWSGP*LPPPQP
Trigger: AGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCC...ACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAGGCTGGTCTGGTCCGTaGCTCCCGCCGCCGCAGCCT +
Preference number: 2 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPGWSGP*LPPPQP
Trigger: AGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCC...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGACCCCTGGATGTGGCTaGTCTGGTCCGTGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLATPGCG*SGPWLP
Trigger: CGGGAGCCACGGACCAGACCAGCCACATCCAGGGGT...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RAALMDLGNAGLEPLGVQLLSEA*ARSCCS
Trigger: GGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAG...CTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAAAGGGGCGGCTCTGCTTaGGGCGGGTCCTCGGTGCTC +
Preference number: 2 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKRGGSA*GGSSVL
Trigger: GAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCT...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGGCTGCTCTCGCGGATaGGGAAGGTGCCATCCCGCT +
Preference number: 2 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVGCSRG*GRCHPA
Trigger: AGCGGGATGGCACCTTCCTCATCCGCGAGAGCAGCC...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 2 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLAASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTAGGTGCCATCCCGCTTaGCACTCAGCATCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLARCHPA*HSASPL
Trigger: CAGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCT...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGACCCCTGGATGTGGCTaGTCTGGTCCGTGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: RAALMDLGNAGLEPLGVQTPGCG*SGPWLP
Trigger: CGGGAGCCACGGACCAGACCAGCCACATCCAGGGGT...CTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCT +
Preference number: 2 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGEDPWM*LVWSVA
Trigger: AGCCACGGACCAGACCAGCCACATCCAGGGGTCCTC...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCAGAGCCGGAGAAATaGGGACCCCTGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVPEPEK*GPLDVA
Trigger: AGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: RAALMDLGNAGLEPLGVQRQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...CTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR TCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: RLFMRLSISLLSEAWARSRQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATGCCCAGGGGCGGCTCTaGTTGGGGCGGGTCCTCGGT +
Preference number: 2 (lower is better)
Translates to: RILCISFSLPSRRKRSRYAQGRL*LGRVLG
Trigger: ACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGC...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLAAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTCTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPLLSEA*ARSCCS
Trigger: GGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAG...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CAA 90 bp ATCTTGCGCAGCTGCATGAGGTCCGGCTTGAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: ILRSCMRSGLRLFMR*SISLLSEAWARSCC
Trigger: GCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCAGCTGCGCAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CAA 90 bp CGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTG +
Preference number: 2 (lower is better)
Translates to: RAPFWVSHTRYWSRI*RSCMRSGLRLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CAA 90 bp TCCCGCTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCC +
Preference number: 2 (lower is better)
Translates to: SRLPLSISSACVRLI*PTYQVRSSWCGRSS
Trigger: GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSRPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp CGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: RAALMDLGNAGLEPLGVQAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...CTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCT +
Preference number: 2 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRAPGIP*CISLES
Trigger: AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGC...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTGCTGCTCCAGCTTCGTaGGGCTCTCATGGATCTCGG +
Preference number: 2 (lower is better)
Translates to: SCACRSLCCPRPGPAAAAAAPAS*GSHGSR
Trigger: CCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGC...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTAGCGCGTCGTTGTGCTaGACCAGCGAGGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPSASLC*TSEACW
Trigger: CCAGCACGCCTCGCTGGTGCAGCACAACGACGCGCT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSKLGAH*LHAVLL
Trigger: AAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTT...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLASHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR TCA 90 bp GGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCGTGGCGGTAGTCCAGAGCCGGAGAAATaGGGACCCCTGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: GAVCPAWHCTGPETRGGSPEPEK*GPLDVA
Trigger: AGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGG...ACTACCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTTTTTCGGGGGTGGGTaGACTTCTCGCAGCGGCCCC +
Preference number: 2 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWFFGGG*TSRSGP
Trigger: GGGGCCGCTGCGAGAAGTTCACCCACCCCCGAAAAA...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSRPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR TCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCCTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAG +
Preference number: 2 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSLPACG*SCPRTK
Trigger: CTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAG...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATGTAAACATGGCAGGTaGAGCCAGAAGGGGCTTCCG +
Preference number: 2 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTCKHGR*SQKGLP
Trigger: CGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 2 (lower is better)
Translates to: GLRLFMRLSISLLSEAWARILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp CAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAAGCATCTCCTCTGCCTaGGTGCGGTTGATCTTGCCC +
Preference number: 2 (lower is better)
Translates to: QLRAALMDLGNAGLEPLGSISSA*VRLILP
Trigger: GGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCT...TCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCT +
Preference number: 2 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYEDPWM*LVWSVA
Trigger: AGCCACGGACCAGACCAGCCACATCCAGGGGTCCTC...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTAGAAATGAGGACCCCTaGATGTGGCTGGTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVRNEDP*MWLVWS
Trigger: GGACCAGACCAGCCACATCCAGGGGTCCTCATTTCT...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATTAGGACCCCCAACATaGAGAGAGACAGGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTLGPPT*RETGAK
Trigger: CTTGGCCCCTGTCTCTCTCCATGTTGGGGGTCCTAA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGTGGGGGTAACCCGGTaGCGGGTTTCACTTCGGGGT +
Preference number: 2 (lower is better)
Translates to: FAILARLASNSRPQKIRPVGVTR*RVSLRG
Trigger: ACCCCGAAGTGAAACCCGCCACCGGGTTACCCCCAC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGACAGTGGCACGATCTCTaGTCACTGCAACCTCCATCT +
Preference number: 2 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGQWHDL*SLQPPS
Trigger: AGATGGAGGTTGCAGTGAGCAGAGATCGTGCCACTG...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 2 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTACTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVLVLHE*VLVLSL
Trigger: GAGACTGAGGACCAGTACGCACTCATGGAGGACGAG...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCCTCGGACTAGGAAGGTaGCATCGGGAGTGTCCCGGA +
Preference number: 2 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVLGLGR*HRECPG
Trigger: TCCGGGACACTCCCGATGGCACCTTCCTAGTCCGAG...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCAGACAGAGGGAGATCTaGAGAATGGGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RLFMRLSISLLSEAWARSRQREI*RMGEGR
Trigger: CCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCT...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCCCATTTTGGCCAGGCTaGCCTCCAACTCCCGACCTC +
Preference number: 2 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVPFWPG*PPTPDL
Trigger: GAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGG...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp ATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGAGCCTCCCAAGTAGCTaGGATTACAGGCGGCCGCCA +
Preference number: 2 (lower is better)
Translates to: ISSACVRLILPTYQVRSSSLPSS*DYRRPP
Trigger: TGGCGGCCGCCTGTAATCCCAGCTACTTGGGAGGCT...CGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTAGCCTCCCAAGTAGCTaGGATTACAGGCGGCCGCCA +
Preference number: 2 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPSLPSS*DYRRPP
Trigger: TGGCGGCCGCCTGTAATCCCAGCTACTTGGGAGGCT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCG +
Preference number: 2 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSQVRSS*CGRSSS
Trigger: CGAGGACGATCTCCCGCACCACGAGGAACGCACTTG...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCAGCGTGTACTCGCCCTaGATCTTGCTAGAAGCATCT +
Preference number: 2 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVSVYSP*ILLEAS
Trigger: AGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCT...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAAAGCTTGGCATTGTACTaGGCCAGAGACTCGTGGCGG +
Preference number: 2 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKSLALY*ARDSWR
Trigger: CCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCT...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGCAGCTCAGCACCTCCTaGGACTCCCCAAAAGGCCCT +
Preference number: 2 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWQLSTS*DSPKGP
Trigger: AGGGCCTTTTGGGGAGTCCCAGGAGGTGCTGAGCTG...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMRPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp TTCTTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCCAACGGAGCAGAAGGTaGGTGGCTCTGAGAAGCCAT +
Preference number: 2 (lower is better)
Translates to: FFCRAPFWVSHTRYWSRIQRSRR*VALRSH
Trigger: ATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTG...GATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp TCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 2 (lower is better)
Translates to: SSSSMSAYWSSVSFLIPSWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...GCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCGGGGCGCGCACTGGGTaGGCCAGGGTGACGGTGAGC +
Preference number: 2 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIGARTG*ARVTVS
Trigger: GCTCACCGTCACCCTGGCGCACCCAGTGCGCGCCCC...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCAGAAATGAGGACCCCTaGATGTGGCTGGTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: GLRLFMRLSISLLSEAWARNEDP*MWLVWS
Trigger: GGACCAGACCAGCCACATCCAGGGGTCCTCATTTCT...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTAGACAGAGGGAGATCTaGAGAATGGGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSRQREI*RMGEGR
Trigger: CCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCT...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCATTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 2 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: FAILARLASNSRPQKIRPSHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAGCCGTGTGTCCAGCTTaGCATTGTACTGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPAVCPA*HCTGPE
Trigger: CTCTGGCCCAGTACAATGCCAAGCTGGACACACGGC...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGCTCCCCAAAAGGCCCTaGGAGGTCCGTGTGTACTCT +
Preference number: 2 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWLPKRP*EVRVYS
Trigger: AGAGTACACACGGACCTCCCAGGGCCTTTTGGGGAG...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR CAA 90 bp TGCTCCAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCG +
Preference number: 2 (lower is better)
Translates to: CSSFVRLSWISAMRD*SRSEFSRILCISFS
Trigger: CGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR TCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATCCAGAGCCGGAGAAATaGGGACCCCTGGATGTGGCT +
Preference number: 2 (lower is better)
Translates to: RILCISFSLPSRRKRSRYPEPEK*GPLDVA
Trigger: AGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGG...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTCAACGGAGCAGAAGGTaGGTGGCTCTGAGAAGCCAT +
Preference number: 2 (lower is better)
Translates to: LSISSACVRLILPTYQVRQRSRR*VALRSH
Trigger: ATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTG...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: CPHAGSAPGIPCCISLESAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGTTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 2 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGCTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: FAILARLASNSRPQKIRPLVLHE*VLVLSL
Trigger: GAGACTGAGGACCAGTACGCACTCATGGAGGACGAG...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGAGCATCTCCTCTGCCTaGGTGCGGTTGATCTTGCCC +
Preference number: 2 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLSISSA*VRLILP
Trigger: GGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCT...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTTAGGACCCCCAACATaGAGAGAGACAGGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: FAILARLASNSRPQKIRPLGPPT*RETGAK
Trigger: CTTGGCCCCTGTCTCTCTCCATGTTGGGGGTCCTAA...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp CAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGATTTCACTTCGGGGTTTaGAGGGGAAGTTGGAGTCTG +
Preference number: 2 (lower is better)
Translates to: QLRAALMDLGNAGLEPLGFHFGV*RGSWSL
Trigger: CAGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAA...TCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCACTCGGTGGAAGACCTTaGTCAGCTTATTGTTCCCGC +
Preference number: 2 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPLGGRP*SAYCSR
Trigger: GCGGGAACAATAAGCTGATCAAGGTCTTCCACCGAG...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp TCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGAGGGGGCCCAAAAGGCCCTCGTaGGGGGTAAAGGCACATCTC +
Preference number: 2 (lower is better)
Translates to: SLKASIAVRFICSSWRRGPKRPS*GVKAHL
Trigger: GAGATGTGCCTTTACCCCTCACGAGGGCCTTTTGGG...CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672815.1
3UTR-3UTR GCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 2 (lower is better)
Translates to: RILCISFSLPSRRKRSRYASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 2 (lower is better)
Translates to: CPHAGSAPGIPCCISLESASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGTTAGGACCCCCAACATaGAGAGAGACAGGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLLGPPT*RETGAK
Trigger: CTTGGCCCCTGTCTCTCTCCATGTTGGGGGTCCTAA...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAAGCAACCTCCATCTCCTaGGTTCAAGAGATTCTCACG +
Preference number: 2 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKATSIS*VQEILT
Trigger: CGTGAGAATCTCTTGAACCCAGGAGATGGAGGTTGC...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGTTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 2 (lower is better)
Translates to: MRSGLRLFMRLSISLLSEFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGGCCGTGTGTCCAGCTTaGCATTGTACTGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RDLSRSEFSRILCISFSLAVCPA*HCTGPE
Trigger: CTCTGGCCCAGTACAATGCCAAGCTGGACACACGGC...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTTTGCTGCATTTCTCTTaGGTCTGGCCCTGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSLLHFS*VWPCSS
Trigger: TGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAA...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGACGATCTCTGCTCACTaGAACCTCCATCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLTISAH*NLHLLG
Trigger: ACCCAGGAGATGGAGGTTGCAGTGAGCAGAGATCGT...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp CAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCT +
Preference number: 2 (lower is better)
Translates to: QLRAALMDLGNAGLEPLGAPGIP*CISLES
Trigger: AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGC...TCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 2 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTAGCGTGTACTCGCCCTaGATCTTGCTAGAAGCATCT +
Preference number: 2 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPSVYSP*ILLEAS
Trigger: AGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR TCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTCTCGGTGGAAGACCTTaGTCAGCTTATTGTTCCCGC +
Preference number: 2 (lower is better)
Translates to: CPHAGSAPGIPCCISLESLGGRP*SAYCSR
Trigger: GCGGGAACAATAAGCTGATCAAGGTCTTCCACCGAG...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGCCAGGTATTCCTTGCTaGATTTCTCTTGAGTCTGGC +
Preference number: 2 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWPGIPC*ISLESG
Trigger: GCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGG...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGCAACCTCCATCTCCTaGGTTCAAGAGATTCTCACG +
Preference number: 2 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLATSIS*VQEILT
Trigger: CGTGAGAATCTCTTGAACCCAGGAGATGGAGGTTGC...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: LSISSACVRLILPTYQVRIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCGCTGCTCCAGCTTCGTaGGGCTCTCATGGATCTCGG +
Preference number: 2 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIAAPAS*GSHGSR
Trigger: CCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGC...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 2 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR TCA 90 bp GGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTGGCCCTGCTCTTTTGCTGCATTTCTCTTaGGTCTGGCCCTGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: GSAPGIPCCISLESGPALLLHFS*VWPCSS
Trigger: TGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAA...AAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR TCA 90 bp TCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCGGCACATCTCAACTCTaGTACGGAGACTGCTCAAGC +
Preference number: 2 (lower is better)
Translates to: SSSSSMSAYWSSVSFLIPGTSQL*YGDCSS
Trigger: GCTTGAGCAGTCTCCGTATCAGAGTTGAGATGTGCC...GGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672815.1
3UTR-3UTR GCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: VQQDPLHLFLVALTPEALIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp TCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCTTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 2 (lower is better)
Translates to: SSSSMSAYWSSVSFLIPSFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...GCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CCA 90 bp TCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCTCCTCCTTGACAATCTaGTCCTGCTGGTATTTGGAC +
Preference number: 2 (lower is better)
Translates to: SSSSSMSAYWSSVSFLIPSSLTI*SCWYLD
Trigger: GTCCAAATACCAGCAGGACCAGATTGTCAAGGAGGA...GGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp GTGTGTACTCTTCATAAAGCTGGTCATACTCGCGGCTCTTGTCCTGGTACTGCTATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 2 (lower is better)
Translates to: VCTLHKAGHTRGSCPGTAIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...AGCAGTACCAGGACAAGAGCCGCGAGTATGACCAGCTTTATGAAGAGTACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR GCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCTTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 2 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR GCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCT +
Preference number: 2 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIAPGIP*CISLES
Trigger: AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGC...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGTGCATGAGGTCCGGCTaGAGGCTGTTCATGCGCTTG +
Preference number: 3 (lower is better)
Translates to: GPGAALLGAGPRCSAGGRCMRSG*RLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCA...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CCA 72 bp GCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTaGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCG +
Preference number: 3 (lower is better)
Translates to: ARAGEMRTPGCG*SGPWLPPPQPP
Trigger: CGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 3 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR TCA 72 bp GCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATaGCGCAGTGCTTGGTGTCGCCGTCCACTACCACGG +
Preference number: 3 (lower is better)
Translates to: APRSRSRWPCGR*RSAWCRRPLPR
Trigger: CCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
3UTR CCA 72 bp AAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCC +
Preference number: 3 (lower is better)
Translates to: KSQSRRNEDPWM*LVWSVAPAAAA
Trigger: GGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR TCA 72 bp AGCAGGCGTAGCAGCCCCGCTGGCTGCTCTCGCGGATaGGGAAGGTGCCATCCCGCTTGCCACTCAGCATCT +
Preference number: 3 (lower is better)
Translates to: SRRSSPAGCSRG*GRCHPACHSAS
Trigger: AGATGCTGAGTGGCAAGCGGGATGGCACCTTCCTCATCCGCGAGAGCAGCCAGCGGGGCTGCTACGCCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 3 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGATCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGTTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 3 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRLSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGTTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 3 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLALSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 72 bp ATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTCTCATGGATCTCGGCA +
Preference number: 3 (lower is better)
Translates to: ISLLSEAWARSC*SSFVRLSWISA
Trigger: TGCCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 72 bp TCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGGCTCTCATGGATCTCG +
Preference number: 3 (lower is better)
Translates to: SISLLSEAWARS*CSSFVRLSWIS
Trigger: CGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGATGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGT +
Preference number: 3 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGCVRLI*PTYQVR
Trigger: ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGGTGTCCAGCTTGGCATaGTACTGGGCCAGAGACTCG +
Preference number: 3 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRVSSLA*YWARDS
Trigger: CGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACAC...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAAGCCGTGTGTCCAGCTaGGCATTGTACTGGGCCAGA +
Preference number: 3 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGSRVSS*ALYWAR
Trigger: TCTGGCCCAGTACAATGCCAAGCTGGACACACGGCT...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 3 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPCISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTTGCATGAGGTCCGGCTaGAGGCTGTTCATGCGCTTG +
Preference number: 3 (lower is better)
Translates to: SCACRSLCCPRPGPAAAACMRSG*RLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCA...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTATACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 3 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 3 (lower is better)
Translates to: RLFMRLSISLLSEAWARSYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCTGCCTGCGTGCGGTaGATCTTGCCCACGTACCAA +
Preference number: 3 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSSACVR*ILPTYQ
Trigger: TTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGA...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CCA 72 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCG +
Preference number: 3 (lower is better)
Translates to: RLILPTYQVRSS*CGRSSSSSMSA
Trigger: CGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAGTTTCACTTCGGGGTTaGGAGGGGAAGTTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGVSLRG*EGKLES
Trigger: AGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAAC...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCTTGCTGCATTTCTCTaGAGTCTGGCCCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVLAAFL*SLALLF
Trigger: GAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 3 (lower is better)
Translates to: FAILARLASNSRPQKIRPCISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 3 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSCISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVRLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR TCA 72 bp GCTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAGTGCGTTCCTCGTGGT +
Preference number: 3 (lower is better)
Translates to: ACHSASPLPACG*SCPRTKCVPRG
Trigger: ACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGCGGGGTTTTGCCATTTaGGCCAGGCTGGCCTCCAAC +
Preference number: 3 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLRGFAI*ARLASN
Trigger: GTTGGAGGCCAGCCTGGCCAAAATGGCAAAACCCCG...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 3 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 3 (lower is better)
Translates to: SCACRSLCCPRPGPAAAAVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTACCTTGATCAGCTTATaGTTCCCGCCTTTCCTGAGG +
Preference number: 3 (lower is better)
Translates to: SCACRSLCCPRPGPAAAATLISL*FPPFLR
Trigger: CCTCAGGAAAGGCGGGAACAATAAGCTGATCAAGGT...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR TCA 72 bp TCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCT +
Preference number: 3 (lower is better)
Translates to: SCGSHGSRQCGT*AARSSAGSFAS
Trigger: AGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 72 bp TTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCCTCCATGAGTGCGTAC +
Preference number: 3 (lower is better)
Translates to: LILPTYQVRSSW*GRSSSSSMSAY
Trigger: GTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 72 bp GTACTGCTGGTGATAGACCTTAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTTGACAATCTGGTCCTG +
Preference number: 3 (lower is better)
Translates to: VLLVIDLKLGAH*LHAVLLDNLVL
Trigger: CAGGACCAGATTGTCAAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTTAAGGTCTATCACCAGCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCGTTTCACTTCGGGGTTaGGAGGGGAAGTTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVVSLRG*EGKLES
Trigger: AGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAAC...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTCTTGCTGCATTTCTCTaGAGTCTGGCCCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPLAAFL*SLALLF
Trigger: GAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCCTTGCTGCATTTCTCTaGAGTCTGGCCCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLLAAFL*SLALLF
Trigger: GAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 72 bp CGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCTGGCCCTGCTCTTCAA +
Preference number: 3 (lower is better)
Translates to: RCPHAGSAPGIP*CISLESGPALQ
Trigger: TTGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 72 bp CGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGC +
Preference number: 3 (lower is better)
Translates to: RSSAGSFASLSR*PHAGSAPGIPC
Trigger: GCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CCA 72 bp AGCCACTCGTTGATTTTCTTCTGCCGGGCGCCTTTCTaGGTGAGCCACACGAGGTACTGGTCTCGGATCTTG +
Preference number: 3 (lower is better)
Translates to: SHSLIFFCRAPF*VSHTRYWSRIL
Trigger: CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAAGAAAATCAACGAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CCA 72 bp ATTTGGACACAGGGTAGAGGAGCCGTGTGTCCAGCTTaGCATTGTACTGGGCCAGAGACTCGTGGCGGTAGT +
Preference number: 3 (lower is better)
Translates to: IWTQGRGAVCPA*HCTGPETRGGS
Trigger: ACTACCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGTCCAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTTTCACTTCGGGGTTaGGAGGGGAAGTTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLVSLRG*EGKLES
Trigger: AGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAAC...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 3 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLRLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCTCTCGGTGGAAGACCTaGATCAGCTTATTGTTCCCG +
Preference number: 3 (lower is better)
Translates to: HRVEEPCVQLGIVLGQRLSRWKT*ISLLFP
Trigger: CGGGAACAATAAGCTGATCAAGGTCTTCCACCGAGA...GAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR GCA 72 bp CTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTCATTTTTAATCCCCAG +
Preference number: 3 (lower is better)
Translates to: LVVREIVLVLHE*VLVLSLIFNPQ
Trigger: CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CCA 72 bp TGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTaGTCCTCAGTCTCATTTTTAATCCCCAGCCACTCG +
Preference number: 3 (lower is better)
Translates to: CGRSSSSSMSAY*SSVSFLIPSHS
Trigger: CGAGTGGCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp TCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 3 (lower is better)
Translates to: SSSSSMSAYWSSVSFLIPYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...GGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGTACTCGCCCTGGATCTaGCTAGAAGCATCTCGGACT +
Preference number: 3 (lower is better)
Translates to: MRSGLRLFMRLSISLLSEYSPWI*LEASRT
Trigger: AGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTA...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR TCA 72 bp AAGGCCCTCGTGAGGGGTAAAGGCACATCTCAACTCTaGTACGGAGACTGCTCAAGCTGGTCCCTCTATCAG +
Preference number: 3 (lower is better)
Translates to: KALVRGKGTSQL*YGDCSSWSLYQ
Trigger: CTGATAGAGGGACCAGCTTGAGCAGTCTCCGTATCAGAGTTGAGATGTGCCTTTACCCCTCACGAGGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672815.1
3UTR-3UTR CAA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTTGCTCTTCAAAGATCTaGATAGTCTCATTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSCSSKI*IVSLKA
Trigger: GGCCTTCAATGAGACTATCAAGATCTTTGAAGAGCA...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGTCTCGGTGGAAGACCTaGATCAGCTTATTGTTCCCG +
Preference number: 3 (lower is better)
Translates to: RDLSRSEFSRILCISFSLSRWKT*ISLLFP
Trigger: CGGGAACAATAAGCTGATCAAGGTCTTCCACCGAGA...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTGCTCTTCAAAGATCTaGATAGTCTCATTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWCSSKI*IVSLKA
Trigger: GGCCTTCAATGAGACTATCAAGATCTTTGAAGAGCA...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp GGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTGGCCCTGCTCTTGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 3 (lower is better)
Translates to: GSAPGIPCCISLESGPALVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...AAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCTGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGT +
Preference number: 3 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLICVRLI*PTYQVR
Trigger: ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR-3UTR CAA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGTGCTCTTCAAAGATCTaGATAGTCTCATTGAAGGCC +
Preference number: 3 (lower is better)
Translates to: RDLSRSEFSRILCISFSLCSSKI*IVSLKA
Trigger: GGCCTTCAATGAGACTATCAAGATCTTTGAAGAGCA...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR GCA 72 bp TTCAAAGATCTTGATAGTCTCATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAGCTCCTGGAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: FKDLDSLIEGLN*STLHLQLLEEG
Trigger: CCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR-3UTR CAA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCATCTTGATAGTCTCATaGAAGGCCTCAATTGCAGTA +
Preference number: 3 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIILIVS*KASIAV
Trigger: TACTGCAATTGAGGCCTTCAATGAGACTATCAAGAT...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CAA 72 bp AGCCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTaGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLRRRRAQGRLC*GRVLGAQRAAG
Trigger: GCCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGGCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGGCCGTGTGCGCTCGTTaGGGCCGGGCATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GPGAALLGAGPRCSAGGRAVCAR*GRASSP
Trigger: TGGGCTGGATGCCCGGCCTCAACGAGCGCACACGGC...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCGCCAAGGGTGCAGGCTaGCACCATGCTCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCAKGAG*HHARPA
Trigger: AGCTGGCCGAGCATGGTGGCAGCCTGCACCCTTGGC...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGCCAAGGGTGCAGGCTaGCACCATGCTCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQAKGAG*HHARPA
Trigger: AGCTGGCCGAGCATGGTGGCAGCCTGCACCCTTGGC...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCGGCTGGCGGCTCTGCTaGCTGCACCAGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCGWRLC*LHQTRE
Trigger: CTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCC...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTACAGAGCGCGGTACTaGAAGCCCTCAGGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCYRARY*KPSGPA
Trigger: GGCGGGCCCTGAGGGCTTCCAGTACCGCGCTCTGTA...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTGGCCGTGCGGTAGATaGCGCAGTGCTTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCWPCGR*RSAWCR
Trigger: GCGACACCAAGCACTGCGTCATCTACCGCACGGCCA...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGGGCGGCTCTGCTGGCTaGACCAGACAAGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GPGAALLGAGPRCSAGGRGGSAG*TRQGSQ
Trigger: TTGGCTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCC...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCGGATGGTTAGGTGGCTaGTTGGAGCCCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCGWLGG*LEPHWP
Trigger: GGGCCAGTGGGGCTCCAAGCAGCCACCTAACCATCC...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCCCATGGCCGCGTGAGTaGGGTGGGGTCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCPWPRE*GGVWMV
Trigger: AACCATCCAGACCCCACCCCACTCACGCGGCCATGG...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGATCCTGCAGGGAGGGTaGGCTCCCTCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQILQGG*APSIGQ
Trigger: CTGGCCAATGGAGGGAGCCCACCCTCCCTGCAGGAT...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGCTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAG +
Preference number: 4 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQLPACG*SCPRTK
Trigger: CTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAG...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCCCAGAGCCGGAGAAATaGGGACCCCTGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCPEPEK*GPLDVA
Trigger: AGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGG...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGCTGCTCCAGCTTCGTaGGGCTCTCATGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQAAPAS*GSHGSR
Trigger: CCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGC...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGTGCCCACGTACCAAGTaGGTTCCTCGTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GPGAALLGAGPRCSAGGRCPRTK*VPRGAG
Trigger: TCCCGCACCACGAGGAACGCACTTGGTACGTGGGCA...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCGGGGTGGGGTCTGGATaGTTAGGTGGCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCGVGSG*LGGCLE
Trigger: CTCCAAGCAGCCACCTAACCATCCAGACCCCACCCC...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRLLSEA*ARSCCS
Trigger: GGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAG...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGTTGGCTTGGGGTGCTaGGACCTCTATCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQVGLGC*DLYLQQ
Trigger: CTGCTGGAGATAGAGGTCCCAGCACCCCAAGCCAAC...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCGCCGTGTGTCCAGCTTaGCATTGTACTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCAVCPA*HCTGPE
Trigger: CTCTGGCCCAGTACAATGCCAAGCTGGACACACGGC...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGGCCGTGTGTCCAGCTTaGCATTGTACTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GPGAALLGAGPRCSAGGRAVCPA*HCTGPE
Trigger: CTCTGGCCCAGTACAATGCCAAGCTGGACACACGGC...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGTTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 4 (lower is better)
Translates to: GPRGGSAWGGSSVLSGRQFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...CTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAACTGGCCCCATTGGTTaGAGCAGGGCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRTGPIG*SRAGRV
Trigger: GACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGT...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGAAGTCACCTCGCTaGCGTGTGCGCTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADGKSPR*RVRSLR
Trigger: CCTCAACGAGCGCACACGGCAGCGAGGTGACTTCCC...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGAWARS*CSSFVR
Trigger: CCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGC...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCTCAGCGGGCGGCAGGCTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GPGAALLGAGPRCSAGGRLVLHE*VLVLSL
Trigger: GAGACTGAGGACCAGTACGCACTCATGGAGGACGAG...CCTGCCGCCCGCTGAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADVRSSW*GRSSSS
Trigger: GGACGAGGACGATCTCCCGCACCACGAGGAACGCAC...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCCCAGCCCACGCTCTGTaGGCAGCGCTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGPAHAL*AALATL
Trigger: GAGGGTGGCGAGCGCTGCCCACAGAGCGTGGGCTGG...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGTGGGGGTAACCCGGTaGCGGGTTTCACTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADVGVTR*RVSLRG
Trigger: ACCCCGAAGTGAAACCCGCCACCGGGTTACCCCCAC...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAGCAGGAAGCGCAGCGTaGGCGCGCGGTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGAGSAA*ARGAAA
Trigger: TGCCGCTGCACCGCGCGCTCACGCTGCGCTTCCTGC...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCCACAGGGGCCGCTCATaGCTCGCTTCAAATTATTCC +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCHRGRS*LASNYS
Trigger: GGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGTG...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAAGCGTGAGCGCGCGGTaGAGCGGCAGCGTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGSVSAR*SGSVGG
Trigger: GCCACCGACGCTGCCGCTGCACCGCGCGCTCACGCT...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS-3UTR GCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACCTCGGACTAGGAAGGTaGCATCGGGAGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADLGLGR*HRECPG
Trigger: TCCGGGACACTCCCGATGGCACCTTCCTAGTCCGAG...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGCTGCTCCAGCTTCGTaGGGCTCTCATGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADAAPAS*GSHGSR
Trigger: CCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGC...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: AEAGGRAVDDAVLGVAVHWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...GTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCACTCAGCATCTCCTCTaGCTGCGTGCGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCTQHLL*LRAVDL
Trigger: AAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGT...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCCAGTGGCACGATCTCTaGTCACTGCAACCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCQWHDL*SLQPPS
Trigger: AGATGGAGGTTGCAGTGAGCAGAGATCGTGCCACTG...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGGGTGGGGTCTGGATaGTTAGGTGGCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADGVGSG*LGGCLE
Trigger: CTCCAAGCAGCCACCTAACCATCCAGACCCCACCCC...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGCCTCAGGGCCCGCCATaGCCGCGTGAGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRPQGPP*PREWGG
Trigger: CCCACCCCACTCACGCGGCCATGGCGGGCCCTGAGG...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCCGCCATGGCCGCGTaGGTGGGGTGGGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVPAMAA*VGWGLD
Trigger: ATCCAGACCCCACCCCACTCACGCGGCCATGGCGGG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGCCGTGTGCGCTCGTTaGGGCCGGGCATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGAAVCAR*GRASSP
Trigger: TGGGCTGGATGCCCGGCCTCAACGAGCGCACACGGC...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAGCAAGTCGGGGAGTGTaGGGCCTGGCTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGASRGV*GLAQGP
Trigger: GGGCCCCTGAGCCAGGCCTCACACTCCCCGACTTGC...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTGCTGCCGTGTCCCACTaGTCCACGTCGCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLAAAVSH*STSLRD
Trigger: GTCCCTGAGCGACGTGGATCAGTGGGACACGGCAGC...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426902.5
ENST00000617130.5
CDS-3UTR TCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACCACGCTGTCCTCCTTaGCAATCTGGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRPRCPP*QSGPAG
Trigger: ACCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGG...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGCCGTCAGCCAGGGCTaGCGTGTCCCACTGATCCAC +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGAVSQG*RVPLIH
Trigger: GTGGATCAGTGGGACACGGCAGCCCTGGCTGACGGC...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAGCCACGCGGCCCAGGTaGTGGAGCAGGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTATRPR*WSRKRS
Trigger: GCTGCGCTTCCTGCTCCAGCACCTGGGCCGCGTGGC...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS-3UTR GCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAAGCATCTCCTCTGCCTaGGTGCGGTTGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRSISSA*VRLILP
Trigger: GGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCT...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACAGGTGCCATCCCGCTTaGCACTCAGCATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADRCHPA*HSASPL
Trigger: CAGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCT...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGCCTCAGGGCCCGCCATaGCCGCGTGAGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQPQGPP*PREWGG
Trigger: CCCACCCCACTCACGCGGCCATGGCGGGCCCTGAGG...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCAGCCCACGCTCTGTaGGCAGCGCTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVPAHAL*AALATL
Trigger: GAGGGTGGCGAGCGCTGCCCACAGAGCGTGGGCTGG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACAGCTTGGCATTGTACTaGGCCAGAGACTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADSLALY*ARDSWR
Trigger: CCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCT...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAAGGGGCGGCTCTGCTTaGGGCGGGTCCTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTRGGSA*GGSSVL
Trigger: GAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCT...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGAAGTTGGAGTCTGTaGGGCGGGTCCCGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGAGSWSL*GGSRPA
Trigger: GGCCGGGCGGGACCCGCCCCACAGACTCCAACTTCC...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLARQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGGCTGCTCTCGCGGATaGGGAAGGTGCCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVGCSRG*GRCHPA
Trigger: AGCGGGATGGCACCTTCCTCATCCGCGAGAGCAGCC...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAAGTTCCTTCCTGCCCTaGCCCCAGGTCTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRSSFLP*PQVYGL
Trigger: TAAGCCATAGACCTGGGGTCAGGGCAGGAAGGAACT...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGACCAGTCTGTACGCGGTaGGGGCAGCTCCGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGPVCTR*GQLRAV
Trigger: TACCGCCCGGAGCTGCCCGCACCGCGTACAGACTGG...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCAGCGTGAGCGCGCGGTaGAGCGGCAGCGTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWASVSAR*SGSVGG
Trigger: GCCACCGACGCTGCCGCTGCACCGCGCGCTCACGCT...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426902.5
CDS-3UTR GCA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLAVRSSW*GRSSSS
Trigger: GGACGAGGACGATCTCCCGCACCACGAGGAACGCAC...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCGTGAGCGCGTCGTTGTaGTGCACCAGCGAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: EAEAGGRAVDDAVLGVAVVSASL*CTSEAC
Trigger: GCACGCCTCGCTGGTGCAGCACAACGACGCGCTCAC...GACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCGGGGCGCGCACTGGGTaGGCCAGGGTGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWAGARTG*ARVTVS
Trigger: GCTCACCGTCACCCTGGCGCACCCAGTGCGCGCCCC...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACTTACCCAGGCTGGAGTaGAGTGGCACGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADLPRLE*SGTISA
Trigger: AGCAGAGATCGTGCCACTGCACTCCAGCCTGGGTAA...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCACACTCCTGTACGCGGTaGGGGCAGCTCCGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGAHSCTR*GQLRAV
Trigger: TACCGCCCGGAGCTGCCCGCACCGCGTACAGGAGTG...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGGCTGGCGGCTCTGCTaGCTGCACCAGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVGWRLC*LHQTRE
Trigger: CTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCC...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTTCACACGGAGGGCCATaGGCGCCCAAGGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SCACRSLCCPRPGPAAAASHGGP*APKAGG
Trigger: GCCGCCAGCCTTGGGCGCCCATGGCCCTCCGTGTGA...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTCCTCAGGGCCCGCCATaGCCGCGTGAGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSPQGPP*PREWGG
Trigger: CCCACCCCACTCACGCGGCCATGGCGGGCCCTGAGG...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAACGCGGCCCAGGTGCTaGAGCAGGAAGCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGTRPRC*SRKRSV
Trigger: CACGCTGCGCTTCCTGCTCCAGCACCTGGGCCGCGT...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCGGGAAGTCAGGGCTaGGCTCACTCCCGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVPGSQG*AHSRRE
Trigger: CTCCCGACGGGAGTGAGCCCAGCCCTGACTTCCCGG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS-3UTR CCA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGCTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRLLSEA*ARSCCS
Trigger: GGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAG...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGATGGATGTGGCTGGTCTaGTCCGTGGCTCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGWMWLV*SVAPAA
Trigger: GGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGAAGACAGAGGGAGATCTaGAGAATGGGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRRQREI*RMGEGR
Trigger: CCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCT...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCGGAAGTTGGAGTCTGTaGGGCGGGTCCCGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RLFMRLSISLLSEAWARSGSWSL*GGSRPA
Trigger: GGCCGGGCGGGACCCGCCCCACAGACTCCAACTTCC...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCCCGCCATGGCCGCGTaGGTGGGGTGGGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILPAMAA*VGWGLD
Trigger: ATCCAGACCCCACCCCACTCACGCGGCCATGGCGGG...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAACCCGCCATGGCCGCGTaGGTGGGGTGGGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKPAMAA*VGWGLD
Trigger: ATCCAGACCCCACCCCACTCACGCGGCCATGGCGGG...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACCTCGGTGGAAGACCTTaGTCAGCTTATTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADLGGRP*SAYCSR
Trigger: GCGGGAACAATAAGCTGATCAAGGTCTTCCACCGAG...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCCTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAG +
Preference number: 4 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGLPACG*SCPRTK
Trigger: CTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAG...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCGGGAAGTCACCTCGCTaGCGTGTGCGCTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EAEAGGRAVDDAVLGVAVGKSPR*RVRSLR
Trigger: CCTCAACGAGCGCACACGGCAGCGAGGTGACTTCCC...GACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGGCCACGCGGCCCAGGTaGTGGAGCAGGAAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILATRPR*WSRKRS
Trigger: GCTGCGCTTCCTGCTCCAGCACCTGGGCCGCGTGGC...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426902.5
CDS-3UTR GCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGCTGCTCCAGCTTCGTaGGGCTCTCATGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGAAPAS*GSHGSR
Trigger: CCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGC...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWAAWARS*CSSFVR
Trigger: CCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGC...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILAWARS*CSSFVR
Trigger: CCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGC...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACACTCAGCATCTCCTCTaGCTGCGTGCGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: WMWLVWSVAPAAAASGADTQHLL*LRAVDL
Trigger: AAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGT...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAAGCGCGTCGTTGTGCTaGACCAGCGAGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGASASLC*TSEACW
Trigger: CCAGCACGCCTCGCTGGTGCAGCACAACGACGCGCT...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGCCCAGGGGCGGCTCTaGTTGGGGCGGGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPAQGRL*LGRVLG
Trigger: ACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGGGCTGGCGGCTCTGCTaGCTGCACCAGACAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLAGWRLC*LHQTRE
Trigger: CTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCC...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAGAGGGTCCGCTGGGTTaGCTTGGGGTGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTEGPLG*LGVLGP
Trigger: AGGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTC...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGGCTGGGAGGGTCCGCTaGGTTGGCTTGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RAALMDLGNAGLEPLGVQAGRVR*VGLGCW
Trigger: CCAGCACCCCAAGCCAACCCAGCGGACCCTCCCAGC...CTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGCCTCAGGGCCCGCCATaGCCGCGTGAGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWPQGPP*PREWGG
Trigger: CCCACCCCACTCACGCGGCCATGGCGGGCCCTGAGG...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCATTTAGGCGGCAGCGCTaGGGGCGCAACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGAFRRQR*GRNLLL
Trigger: GAGCAGGAGGTTGCGCCCCCAGCGCTGCCGCCTAAA...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAGTGGGCTCCCTCCATTaGCCAGGACTGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTVGSLH*PGLWRP
Trigger: CGGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCAC...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGGTGGGCTCCCTCCATTaGCCAGGACTGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRVGSLH*PGLWRP
Trigger: CGGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCAC...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTACTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVLLSEA*ARSCCS
Trigger: GGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAG...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCAGGGGCGGCTCTGCTTaGGGCGGGTCCTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSRGGSA*GGSSVL
Trigger: GAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCT...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGGCTGGTCTGGTCCGTaGCTCCCGCCGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPGWSGP*LPPPQP
Trigger: AGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGGGCTGGTCTGGTCCGTaGCTCCCGCCGCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ISSACVRLILPTYQVRSSGWSGP*LPPPQP
Trigger: AGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCC...CGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTGGATGTGGCTGGTCTaGTCCGTGGCTCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSWMWLV*SVAPAA
Trigger: GGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTACCCCTGGATGTGGCTaGTCTGGTCCGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVTPGCG*SGPWLP
Trigger: CGGGAGCCACGGACCAGACCAGCCACATCCAGGGGT...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTGGAAGTTGGAGTCTGTaGGGCGGGTCCCGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSGSWSL*GGSRPA
Trigger: GGCCGGGCGGGACCCGCCCCACAGACTCCAACTTCC...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACAGGTCACTGGGCCATTaGGTCCTCCATCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AEAGGRAVDDAVLGVAVHRSLGH*VLHQQV
Trigger: CACCTGCTGATGGAGGACTCAATGGCCCAGTGACCT...GTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTACTGGCCCCATTGGTTaGAGCAGGGCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVTGPIG*SRAGRV
Trigger: GACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGT...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTCCCGCCATGGCCGCGTaGGTGGGGTGGGGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LSISSACVRLILPTYQVRPAMAA*VGWGLD
Trigger: ATCCAGACCCCACCCCACTCACGCGGCCATGGCGGG...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCGCCGTGTGCGCTCGTTaGGGCCGGGCATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVAVCAR*GRASSP
Trigger: TGGGCTGGATGCCCGGCCTCAACGAGCGCACACGGC...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGGCCGTGTGCGCTCGTTaGGGCCGGGCATCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWAVCAR*GRASSP
Trigger: TGGGCTGGATGCCCGGCCTCAACGAGCGCACACGGC...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGCAAGTCGGGGAGTGTaGGGCCTGGCTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYASRGV*GLAQGP
Trigger: GGGCCCCTGAGCCAGGCCTCACACTCCCCGACTTGC...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGCAGGAAGCGCAGCGTaGGCGCGCGGTGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLAGSAA*ARGAAA
Trigger: TGCCGCTGCACCGCGCGCTCACGCTGCGCTTCCTGC...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS-3UTR TCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTTTTTTCGGGGGTGGGTaGACTTCTCGCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVFFGGG*TSRSGP
Trigger: GGGGCCGCTGCGAGAAGTTCACCCACCCCCGAAAAA...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTCGTCCTCGTCCTCCATaGGTGCGTATCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGRPRPP*VRILSL
Trigger: GAGACTGAGGATACGCACTCATGGAGGACGAGGACG...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464016.3
CDS-3UTR GCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVAWARS*CSSFVR
Trigger: CCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGC...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: EAEAGGRAVDDAVLGVAVRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...GACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCAGCATCTCCTCTGCCTaGGTGCGGTTGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGSISSA*VRLILP
Trigger: GGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCT...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTAGGTGCCATCCCGCTTaGCACTCAGCATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGRCHPA*HSASPL
Trigger: CAGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCT...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCGTGAGCGCGTCGTTGTaGTGCACCAGCGAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: RLFMRLSISLLSEAWARSVSASL*CTSEAC
Trigger: GCACGCCTCGCTGGTGCAGCACAACGACGCGCTCAC...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTGCCCAGGGGCGGCTCTaGTTGGGGCGGGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: TQGRGAVCPAWHCTGPETAQGRL*LGRVLG
Trigger: ACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGC...AGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCGAGGGTCCGCTGGGTTaGCTTGGGGTGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSEGPLG*LGVLGP
Trigger: AGGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTC...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGCCAGCCCACGCTCTGTaGGCAGCGCTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: ISSACVRLILPTYQVRSSPAHAL*AALATL
Trigger: GAGGGTGGCGAGCGCTGCCCACAGAGCGTGGGCTGG...CGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTGTGGGCTCCCTCCATTaGCCAGGACTGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SCACRSLCCPRPGPAAAAVGSLH*PGLWRP
Trigger: CGGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCAC...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTTTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGTGGGGGTAACCCGGTaGCGGGTTTCACTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGAVGVTR*RVSLRG
Trigger: ACCCCGAAGTGAAACCCGCCACCGGGTTACCCCCAC...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGCCATGCTCGGCCAGCTaGGGACGCCGACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLPCSAS*GRRPGR
Trigger: GCGACCAGGTCGGCGTCCTCAGCTGGCCGAGCATGG...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAACCATGCTCGGCCAGCTaGGGACGCCGACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: LGQRLVAVVIDEVHNGAEPCSAS*GRRPGR
Trigger: GCGACCAGGTCGGCGTCCTCAGCTGGCCGAGCATGG...TTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCCATGCTCGGCCAGCTaGGGACGCCGACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALPCSAS*GRRPGR
Trigger: GCGACCAGGTCGGCGTCCTCAGCTGGCCGAGCATGG...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCCTCCATCAGCAGGTaGGGCTGGGGCAGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWSSISR*GWGRPL
Trigger: GAGCGGCCTGCCCCAGCCTCACCTGCTGATGGAGGA...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTCCTCCATCAGCAGGTaGGGCTGGGGCAGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVSSISR*GWGRPL
Trigger: GAGCGGCCTGCCCCAGCCTCACCTGCTGATGGAGGA...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCGCAAGTCGGGGAGTGTaGGGCCTGGCTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALASRGV*GLAQGP
Trigger: GGGCCCCTGAGCCAGGCCTCACACTCCCCGACTTGC...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAAGCTGCCGTGTCCCACTaGTCCACGTCGCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKAAVSH*STSLRD
Trigger: GTCCCTGAGCGACGTGGATCAGTGGGACACGGCAGC...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
CDS-3UTR TCA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCCCACGCTGTCCTCCTTaGCAATCTGGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVPRCPP*QSGPAG
Trigger: ACCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGG...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQRQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAG +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTLPACG*SCPRTK
Trigger: CTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAG...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCGGCTGCTCTCGCGGATaGGGAAGGTGCCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWAGCSRG*GRCHPA
Trigger: AGCGGGATGGCACCTTCCTCATCCGCGAGAGCAGCC...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTATGGCCGTGCGGTAGATaGCGCAGTGCTTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVWPCGR*RSAWCR
Trigger: GCGACACCAAGCACTGCGTCATCTACCGCACGGCCA...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGTTTTTCGGGGGTGGGTaGACTTCTCGCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: RAALMDLGNAGLEPLGVQFFGGG*TSRSGP
Trigger: GGGGCCGCTGCGAGAAGTTCACCCACCCCCGAAAAA...CTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCTGGGTTGGCTTGGGGTaGTGGGACCTCTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: EAEAGGRAVDDAVLGVAVWVGLG*WDLYLQ
Trigger: CTGGAGATAGAGGTCCCAGCACCCCAAGCCAACCCA...GACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCGGAACTCCACATAGGTaGCAGGGAAGTCACCTCGCT +
Preference number: 4 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGGTPHR*QGSHLA
Trigger: AGCGAGGTGACTTCCCTGGCACCTATGTGGAGTTCC...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAGAGCGGCGCGGGCAGTaGCAGCAGGAAGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTERRGQ*QQEALN
Trigger: ATTAAGAGCTTCCTGCTGGCACTGCCCGCGCCGCTC...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAGAGCGGCGCGGGCAGTaGCAGCAGGAAGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGERRGQ*QQEALN
Trigger: ATTAAGAGCTTCCTGCTGGCACTGCCCGCGCCGCTC...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGATTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGGCCTGGGCCCGCAGCTaGTGCTCCAGCTTCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMAWARS*CSSFVR
Trigger: CCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCAGGC...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGATGCCCACGTACCAAGTaGGTTCCTCGTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGCPRTK*VPRGAG
Trigger: TCCCGCACCACGAGGAACGCACTTGGTACGTGGGCA...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGTGCCCACGTACCAAGTaGGTTCCTCGTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLACPRTK*VPRGAG
Trigger: TCCCGCACCACGAGGAACGCACTTGGTACGTGGGCA...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGAGCGCGTCGTTGTGCTaGACCAGCGAGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPSASLC*TSEACW
Trigger: CCAGCACGCCTCGCTGGTGCAGCACAACGACGCGCT...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGGGCGCGCACTGGGTaGGCCAGGGTGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VREPQTRARAGEMRTPGCGARTG*ARVTVS
Trigger: GCTCACCGTCACCCTGGCGCACCCAGTGCGCGCCCC...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTGGGGCGCGCACTGGGTaGGCCAGGGTGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CPHAGSAPGIPCCISLESGARTG*ARVTVS
Trigger: GCTCACCGTCACCCTGGCGCACCCAGTGCGCGCCCC...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTCACACGGAGGGCCATaGGCGCCCAAGGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMSHGGP*APKAGG
Trigger: GCCGCCAGCCTTGGGCGCCCATGGCCCTCCGTGTGA...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCAGGGAGTTGGTGGTGTaGTGTCAGGTCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVRELVV*CQVTGP
Trigger: TGGCCCAGTGACCTGACACCACACCACCAACTCCCT...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGTGGGAGGGAGTTGGTaGTGTGGTGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVVGGSW*CGVRSL
Trigger: CAGTGACCTGACACCACACCACCAACTCCCTCCCAC...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGGCTGGGAGGGTCCGCTaGGTTGGCTTGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWAGRVR*VGLGCW
Trigger: CCAGCACCCCAAGCCAACCCAGCGGACCCTCCCAGC...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAGCTGGGAGGGTCCGCTaGGTTGGCTTGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPAGRVR*VGLGCW
Trigger: CCAGCACCCCAAGCCAACCCAGCGGACCCTCCCAGC...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTTACAGAGCGCGGTACTaGAAGCCCTCAGGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSYRARY*KPSGPA
Trigger: GGCGGGCCCTGAGGGCTTCCAGTACCGCGCTCTGTA...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTACGCGGCCCAGGTGCTaGAGCAGGAAGCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSTRPRC*SRKRSV
Trigger: CACGCTGCGCTTCCTGCTCCAGCACCTGGGCCGCGT...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426902.5
CDS-3UTR CCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATCCGGGAAGTCAGGGCTaGGCTCACTCCCGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYPGSQG*AHSRRE
Trigger: CTCCCGACGGGAGTGAGCCCAGCCCTGACTTCCCGG...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTTTTAGGCGGCAGCGCTaGGGGCGCAACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSFRRQR*GRNLLL
Trigger: GAGCAGGAGGTTGCGCCCCCAGCGCTGCCGCCTAAA...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGTTTAGGCGGCAGCGCTaGGGGCGCAACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPFRRQR*GRNLLL
Trigger: GAGCAGGAGGTTGCGCCCCCAGCGCTGCCGCCTAAA...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCATTGGCCAGGACTGTaGAGGCCGGCTTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVHWPGL*RPALPW
Trigger: CCAAGGCAAAGCCGGCCTCCACAGTCCTGGCCAATG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCATCCTGCAGGGAGGGTaGGCTCCCTCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSILQGG*APSIGQ
Trigger: CTGGCCAATGGAGGGAGCCCACCCTCCCTGCAGGAT...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGATCCTCCTTGACAATCTaGTCCTGCTGGTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRSSLTI*SCWYLD
Trigger: GTCCAAATACCAGCAGGACCAGATTGTCAAGGAGGA...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGGGAAGTTGGAGTCTGTaGGGCGGGTCCCGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMGSWSL*GGSRPA
Trigger: GGCCGGGCGGGACCCGCCCCACAGACTCCAACTTCC...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGCAAGTCGGGGAGTGTaGGGCCTGGCTCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VREPQTRARAGEMRTPGCASRGV*GLAQGP
Trigger: GGGCCCCTGAGCCAGGCCTCACACTCCCCGACTTGC...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCGCTGCCGTGTCCCACTaGTCCACGTCGCTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVAAVSH*STSLRD
Trigger: GTCCCTGAGCGACGTGGATCAGTGGGACACGGCAGC...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
CDS-3UTR TCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTTCTTCCAAGTGTTCCTaGAGCAGCTTCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLASSKCS*SSFSTS
Trigger: GCTGGTGGAGAAGCTGCTTCAGGAACACTTGGAAGA...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILRQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCCTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAG +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSLPACG*SCPRTK
Trigger: CTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAG...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGGGCTGCTCTCGCGGATaGGGAAGGTGCCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWGCSRG*GRCHPA
Trigger: AGCGGGATGGCACCTTCCTCATCCGCGAGAGCAGCC...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGTGGCCGTGCGGTAGATaGCGCAGTGCTTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILWPCGR*RSAWCR
Trigger: GCGACACCAAGCACTGCGTCATCTACCGCACGGCCA...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGACCAGAGCCGGAGAAATaGGGACCCCTGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: QLRAALMDLGNAGLEPLGPEPEK*GPLDVA
Trigger: AGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGG...TCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATGGGTTGGCTTGGGGTaGTGGGACCTCTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTWVGLG*WDLYLQ
Trigger: CTGGAGATAGAGGTCCCAGCACCCCAAGCCAACCCA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTGGATGGTTAGGTGGCTaGTTGGAGCCCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSGWLGG*LEPHWP
Trigger: GGGCCAGTGGGGCTCCAAGCAGCCACCTAACCATCC...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGGCCGTCAGCCAGGGCTaGCGTGTCCCACTGATCCAC +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWAVSQG*RVPLIH
Trigger: GTGGATCAGTGGGACACGGCAGCCCTGGCTGACGGC...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSKLGAH*LHAVLL
Trigger: AAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTT...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RLFMRLSISLLSEAWARSRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAAGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKVRSSW*GRSSSS
Trigger: GGACGAGGACGATCTCCCGCACCACGAGGAACGCAC...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTATGCCCACGTACCAAGTaGGTTCCTCGTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVCPRTK*VPRGAG
Trigger: TCCCGCACCACGAGGAACGCACTTGGTACGTGGGCA...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTAGCATCTCCTCTGCCTaGGTGCGGTTGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVSISSA*VRLILP
Trigger: GGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCT...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGAGCGCGTCGTTGTGCTaGACCAGCGAGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPSASLC*TSEACW
Trigger: CCAGCACGCCTCGCTGGTGCAGCACAACGACGCGCT...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGTGAGCGCGTCGTTGTaGTGCACCAGCGAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYVSASL*CTSEAC
Trigger: GCACGCCTCGCTGGTGCAGCACAACGACGCGCTCAC...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGGTGAGCGCGTCGTTGTaGTGCACCAGCGAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWVSASL*CTSEAC
Trigger: GCACGCCTCGCTGGTGCAGCACAACGACGCGCTCAC...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTCAGTGGCACGATCTCTaGTCACTGCAACCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGQWHDL*SLQPPS
Trigger: AGATGGAGGTTGCAGTGAGCAGAGATCGTGCCACTG...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RLFMRLSISLLSEAWARSAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp CTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAAGCTGGGAGGGTCCGCTaGGTTGGCTTGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGQRLVAVVIDEVHNGAEAGRVR*VGLGCW
Trigger: CCAGCACCCCAAGCCAACCCAGCGGACCCTCCCAGC...TTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGTGCTTGGAGCCCCACTaGCCCCATTGGTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLACLEPH*PHWLKQ
Trigger: CTGCTTCAACCAATGGGGCCAGTGGGGCTCCAAGCA...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTGTCTGGATGGTTAGGTaGCTGCTTGGAGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVVWMVR*LLGAPL
Trigger: CAGTGGGGCTCCAAGCAGCCACCTAACCATCCAGAC...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAGAGTGGGGTGGGGTCTaGATGGTTAGGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTEWGGV*MVRWLL
Trigger: AAGCAGCCACCTAACCATCCAGACCCCACCCCACTC...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCCCATGGCCGCGTGAGTaGGGTGGGGTCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSPWPRE*GGVWMV
Trigger: AACCATCCAGACCCCACCCCACTCACGCGGCCATGG...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTTACAGAGCGCGGTACTaGAAGCCCTCAGGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPYRARY*KPSGPA
Trigger: GGCGGGCCCTGAGGGCTTCCAGTACCGCGCTCTGTA...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTTACAGAGCGCGGTACTaGAAGCCCTCAGGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSYRARY*KPSGPA
Trigger: GGCGGGCCCTGAGGGCTTCCAGTACCGCGCTCTGTA...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATTTTAGGCGGCAGCGCTaGGGGCGCAACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYFRRQR*GRNLLL
Trigger: GAGCAGGAGGTTGCGCCCCCAGCGCTGCCGCCTAAA...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGGTGGGCTCCCTCCATTaGCCAGGACTGTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWVGSLH*PGLWRP
Trigger: CGGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCAC...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTAGCTTGGCATTGTACTaGGCCAGAGACTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVSLALY*ARDSWR
Trigger: CCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCT...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAGCCGTGTGTCCAGCTTaGCATTGTACTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGAVCPA*HCTGPE
Trigger: CTCTGGCCCAGTACAATGCCAAGCTGGACACACGGC...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTTTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTSHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTACAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVQVRSS*CGRSSS
Trigger: CGAGGACGATCTCCCGCACCACGAGGAACGCACTTG...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSQVRSS*CGRSSS
Trigger: CGAGGACGATCTCCCGCACCACGAGGAACGCACTTG...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGAGGGGCGGCTCTGCTTaGGGCGGGTCCTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: MRSGLRLFMRLSISLLSERGGSA*GGSSVL
Trigger: GAGCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCT...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGACCCCTGGATGTGGCTaGTCTGGTCCGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWTPGCG*SGPWLP
Trigger: CGGGAGCCACGGACCAGACCAGCCACATCCAGGGGT...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTACCCCTGGATGTGGCTaGTCTGGTCCGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LSISSACVRLILPTYQVRTPGCG*SGPWLP
Trigger: CGGGAGCCACGGACCAGACCAGCCACATCCAGGGGT...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWAEDPWM*LVWSVA
Trigger: AGCCACGGACCAGACCAGCCACATCCAGGGGTCCTC...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCGTGGGGGTAACCCGGTaGCGGGTTTCACTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWAVGVTR*RVSLRG
Trigger: ACCCCGAAGTGAAACCCGCCACCGGGTTACCCCCAC...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGCAGCTCAGCACCTCCTaGGACTCCCCAAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQQLSTS*DSPKGP
Trigger: AGGGCCTTTTGGGGAGTCCCAGGAGGTGCTGAGCTG...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTCAGCTCAGCACCTCCTaGGACTCCCCAAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SCACRSLCCPRPGPAAAAQLSTS*DSPKGP
Trigger: AGGGCCTTTTGGGGAGTCCCAGGAGGTGCTGAGCTG...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CAA 72 bp AGCTGCATGAGGTCCGGCTTGAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SCMRSGLRLFMR*SISLLSEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
3UTR CAA 72 bp CCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: PLSISSACVRLI*PTYQVRSSWCG
Trigger: CCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTACTGGCCCCATTGGTTaGAGCAGGGCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: AGSFASLSRCPHAGSAPGTGPIG*SRAGRV
Trigger: GACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGT...ACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGACAACGGAGCAGAAGGTaGGTGGCTCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGQRSRR*VALRSH
Trigger: ATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTG...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGCAACGGAGCAGAAGGTaGGTGGCTCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLAQRSRR*VALRSH
Trigger: ATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTG...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTTGCTGCATTTCTCTTaGGTCTGGCCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGLLHFS*VWPCSS
Trigger: TGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAA...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWRQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWARPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCTGCCTGCGTGCGGTTaGTCTTGCCCACGTACCAAG +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWALPACG*SCPRTK
Trigger: CTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAG...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTGAGGGTCAGCGTGTACTCGCCCTGGATCTTGCTAGAAGCATCTCGGACTAGGGGCTGCTCTCGCGGATaGGGAAGGTGCCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: LRVSVYSPWILLEASRTRGCSRG*GRCHPA
Trigger: AGCGGGATGGCACCTTCCTCATCCGCGAGAGCAGCC...CCTAGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCTGACCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATTGGCCGTGCGGTAGATaGCGCAGTGCTTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYWPCGR*RSAWCR
Trigger: GCGACACCAAGCACTGCGTCATCTACCGCACGGCCA...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAAGTTCCTTCCTGCCCTaGCCCCAGGTCTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGSSFLP*PQVYGL
Trigger: TAAGCCATAGACCTGGGGTCAGGGCAGGAAGGAACT...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAAGCCAAGGGTGCAGGCTaGCACCATGCTCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGQRLVAVVIDEVHNGAEAKGAG*HHARPA
Trigger: AGCTGGCCGAGCATGGTGGCAGCCTGCACCCTTGGC...TTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGCGGCTCTGCTGGCTaGACCAGACAAGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYGGSAG*TRQGSQ
Trigger: TTGGCTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCC...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATCAAGGCTGGCGGCTCTaGTGGCTGCACCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYQGWRL*WLHQTR
Trigger: CCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCCTTG...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTGGAACTCCACATAGGTaGCAGGGAAGTCACCTCGCT +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVGTPHR*QGSHLA
Trigger: AGCGAGGTGACTTCCCTGGCACCTATGTGGAGTTCC...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATCCAGTCTGTACGCGGTaGGGGCAGCTCCGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: RILCISFSLPSRRKRSRYPVCTR*GQLRAV
Trigger: TACCGCCCGGAGCTGCCCGCACCGCGTACAGACTGG...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp TGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGGCCGTCAGCCAGGGCTaGCGTGTCCCACTGATCCAC +
Preference number: 4 (lower is better)
Translates to: CISFSLPSRRKRSRYSLLAVSQG*RVPLIH
Trigger: GTGGATCAGTGGGACACGGCAGCCCTGGCTGACGGC...CAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCTCGGACTAGGAAGGTaGCATCGGGAGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPLGLGR*HRECPG
Trigger: TCCGGGACACTCCCGATGGCACCTTCCTAGTCCGAG...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWKLGAH*LHAVLL
Trigger: AAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTT...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: RDLSRSEFSRILCISFSLWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSRILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGACTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGLVLHE*VLVLSL
Trigger: GAGACTGAGGACCAGTACGCACTCATGGAGGACGAG...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPVRSSW*GRSSSS
Trigger: GGACGAGGACGATCTCCCGCACCACGAGGAACGCAC...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGAGCATCTCCTCTGCCTaGGTGCGGTTGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQSISSA*VRLILP
Trigger: GGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCT...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGAGCGCGTCGTTGTGCTaGACCAGCGAGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLSASLC*TSEACW
Trigger: CCAGCACGCCTCGCTGGTGCAGCACAACGACGCGCT...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCAGGGAGTTGGTGGTGTaGTGTCAGGTCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLFMRLSISLLSEAWARSRELVV*CQVTGP
Trigger: TGGCCCAGTGACCTGACACCACACCACCAACTCCCT...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGTCTGGATGGTTAGGTaGCTGCTTGGAGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQVWMVR*LLGAPL
Trigger: CAGTGGGGCTCCAAGCAGCCACCTAACCATCCAGAC...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTGGGGTGGGGTCTGGATaGTTAGGTGGCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSGVGSG*LGGCLE
Trigger: CTCCAAGCAGCCACCTAACCATCCAGACCCCACCCC...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCGAGTGGGGTGGGGTCTaGATGGTTAGGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSEWGGV*MVRWLL
Trigger: AAGCAGCCACCTAACCATCCAGACCCCACCCCACTC...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCCCATGGCCGCGTGAGTaGGGTGGGGTCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLPWPRE*GGVWMV
Trigger: AACCATCCAGACCCCACCCCACTCACGCGGCCATGG...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGGGGAGCCACATCAGGTaGGGAGAACTGCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPGSHIR*GELLGQ
Trigger: TTGCCCGAGCAGTTCTCCCCACCTGATGTGGCTCCC...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATCCTGCAGGGAGGGTaGGCTCCCTCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWILQGG*APSIGQ
Trigger: CTGGCCAATGGAGGGAGCCCACCCTCCCTGCAGGAT...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTAGCGTGTACTCGCCCTaGATCTTGCTAGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGSVYSP*ILLEAS
Trigger: AGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCT...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGATTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 4 (lower is better)
Translates to: QLRAALMDLGNAGLEPLGFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...TCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTCTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCILLSEA*ARSCCS
Trigger: GGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAG...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVSHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTTGGATGTGGCTGGTCTaGTCCGTGGCTCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: CPHAGSAPGIPCCISLESWMWLV*SVAPAA
Trigger: GGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPEDPWM*LVWSVA
Trigger: AGCCACGGACCAGACCAGCCACATCCAGGGGTCCTC...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAAGAAATGAGGACCCCTaGATGTGGCTGGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGRNEDP*MWLVWS
Trigger: GGACCAGACCAGCCACATCCAGGGGTCCTCATTTCT...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGTGGGGGTAACCCGGTaGCGGGTTTCACTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSVGVTR*RVSLRG
Trigger: ACCCCGAAGTGAAACCCGCCACCGGGTTACCCCCAC...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGCTCCCCAAAAGGCCCTaGGAGGTCCGTGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQLPKRP*EVRVYS
Trigger: AGAGTACACACGGACCTCCCAGGGCCTTTTGGGGAG...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CAA 72 bp CGCTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTaGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RLPLSISSACVR*ILPTYQVRSSW
Trigger: CCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGAGGTCACTGGGCCATTaGGTCCTCCATCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPRSLGH*VLHQQV
Trigger: CACCTGCTGATGGAGGACTCAATGGCCCAGTGACCT...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATCTTCCAAGTGTTCCTaGAGCAGCTTCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTSSKCS*SSFSTS
Trigger: GCTGGTGGAGAAGCTGCTTCAGGAACACTTGGAAGA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWRPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTCCAGAGCCGGAGAAATaGGGACCCCTGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSISSACVRLILPTYQVRPEPEK*GPLDVA
Trigger: AGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGG...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGCAAGGCTGGCGGCTCTaGTGGCTGCACCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLQGWRL*WLHQTR
Trigger: CCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCCTTG...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACACAGGGGCCGCTCATaGCTCGCTTCAAATTATTCC +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTHRGRS*LASNYS
Trigger: GGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGTG...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCACAGGGGCCGCTCATaGCTCGCTTCAAATTATTCC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVHRGRS*LASNYS
Trigger: GGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGTG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTGGATGGTTAGGTGGCTaGTTGGAGCCCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: TQGRGAVCPAWHCTGPETGWLGG*LEPHWP
Trigger: GGGCCAGTGGGGCTCCAAGCAGCCACCTAACCATCC...AGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTTCAGGTGGGGAGAACTaGTCGGGCAAGTCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPSGGEN*SGKSGS
Trigger: ACTCCCCGACTTGCCCGAGCAGTTCTCCCCACCTGA...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLKLGAH*LHAVLL
Trigger: AAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTT...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTTTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLAFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCCTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSLVLHE*VLVLSL
Trigger: GAGACTGAGGACCAGTACGCACTCATGGAGGACGAG...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMVRSSW*GRSSSS
Trigger: GGACGAGGACGATCTCCCGCACCACGAGGAACGCAC...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTAGCATCTCCTCTGCCTaGGTGCGGTTGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSSISSA*VRLILP
Trigger: GGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCT...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAACTCAGCATCTCCTCTaGCTGCGTGCGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTTQHLL*LRAVDL
Trigger: AAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGT...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTAGCGCGTCGTTGTGCTaGACCAGCGAGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCISASLC*TSEACW
Trigger: CCAGCACGCCTCGCTGGTGCAGCACAACGACGCGCT...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTGTGTACTCTTCATAAAGCTGGTCATACTCGCGGCTCTTGTCCTGGTACTGCTGCCCAGGGGCGGCTCTaGTTGGGGCGGGTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: VCTLHKAGHTRGSCPGTAAQGRL*LGRVLG
Trigger: ACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGC...AGCAGTACCAGGACAAGAGCCGCGAGTATGACCAGCTTTATGAAGAGTACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACCTCGTCCTCCATGAGTaGGTATCCTCAGTCTCATTT +
Preference number: 4 (lower is better)
Translates to: AEAGGRAVDDAVLGVAVHLVLHE*VSSVSF
Trigger: AAATGAGACTGAGGATACGCACTCATGGAGGACGAG...GTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464016.3
CDS-3UTR CCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGTGGTGTCAGGTCACTaGGCCATTGAGTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQVVSGH*AIESSI
Trigger: GATGGAGGACTCAATGGCCCAGTGACCTGACACCAC...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCGTGGGAGGGAGTTGGTaGTGTGGTGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWAVGGSW*CGVRSL
Trigger: CAGTGACCTGACACCACACCACCAACTCCCTCCCAC...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCCCACCATTCGTCAGCTaGTGGGAGGGAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSPPFVS*WEGVGG
Trigger: ACCACCAACTCCCTCCCACCAGCTGACGAATGGTGG...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTAGGGCCACTCGTCACTaGGTCCACCATTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSRATRH*VHHSSA
Trigger: AGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCT...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGAGGGCCACTCGTCACTaGGTCCACCATTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILRATRH*VHHSSA
Trigger: AGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCT...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTGAGGGTCCGCTGGGTTaGCTTGGGGTGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: CPHAGSAPGIPCCISLESEGPLG*LGVLGP
Trigger: AGGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTC...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCCAGCCCACGCTCTGTaGGCAGCGCTCGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQPAHAL*AALATL
Trigger: GAGGGTGGCGAGCGCTGCCCACAGAGCGTGGGCTGG...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTGGGAGCCACATCAGGTaGGGAGAACTGCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPGSHIR*GELLGQ
Trigger: TTGCCCGAGCAGTTCTCCCCACCTGATGTGGCTCCC...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCGGGAGCCACATCAGGTaGGGAGAACTGCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVGSHIR*GELLGQ
Trigger: TTGCCCGAGCAGTTCTCCCCACCTGATGTGGCTCCC...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTCATTGGCCAGGACTGTaGAGGCCGGCTTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSHWPGL*RPALPW
Trigger: CCAAGGCAAAGCCGGCCTCCACAGTCCTGGCCAATG...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAAATCCTGCAGGGAGGGTaGGCTCCCTCCATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGQRLVAVVIDEVHNGAEILQGG*APSIGQ
Trigger: CTGGCCAATGGAGGGAGCCCACCCTCCCTGCAGGAT...TTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTGCCGTGTGTCCAGCTTaGCATTGTACTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSAVCPA*HCTGPE
Trigger: CTCTGGCCCAGTACAATGCCAAGCTGGACACACGGC...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATTCATCTGCAGCTCCTaGGAGGTCCGTGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTFICSS*EVRVYS
Trigger: AGAGTACACACGGACCTCCCAGGAGCTGCAGATGAA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222254.13
CDS-3UTR CCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWQVRSS*CGRSSS
Trigger: CGAGGACGATCTCCCGCACCACGAGGAACGCACTTG...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPQVRSS*CGRSSS
Trigger: CGAGGACGATCTCCCGCACCACGAGGAACGCACTTG...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGAGGGTCAGCGTGTACTCGCCCTGGATCTTGCTAGAAGCATCTCGGACTAGGGAGGACCCCTGGATGTaGCTGGTCTGGTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: LRVSVYSPWILLEASRTREDPWM*LVWSVA
Trigger: AGCCACGGACCAGACCAGCCACATCCAGGGGTCCTC...CCTAGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCTGACCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTAGAAATGAGGACCCCTaGATGTGGCTGGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SCACRSLCCPRPGPAAAARNEDP*MWLVWS
Trigger: GGACCAGACCAGCCACATCCAGGGGTCCTCATTTCT...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGAGACAGAGGGAGATCTaGAGAATGGGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQRQREI*RMGEGR
Trigger: CCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCT...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATCCATTTTGGCCAGGCTaGCCTCCAACTCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYPFWPG*PPTPDL
Trigger: GAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGG...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCCCATTTTGGCCAGGCTaGCCTCCAACTCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLPFWPG*PPTPDL
Trigger: GAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGG...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGCCATTTTGGCCAGGCTaGCCTCCAACTCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWPFWPG*PPTPDL
Trigger: GAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGG...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CAA 72 bp TTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCCGGCTTGAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FWVSHTRYWSRI*RSCMRSGLRLF
Trigger: GAACAGCCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGAGGTCACTGGGCCATTaGGTCCTCCATCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPRSLGH*VLHQQV
Trigger: CACCTGCTGATGGAGGACTCAATGGCCCAGTGACCT...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACCTTCAAATTATTCCATaGCCCTTACAAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: AEAGGRAVDDAVLGVAVHLQIIP*PLQGPL
Trigger: GAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAG...GTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGACTCGGTGGAAGACCTTaGTCAGCTTATTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: QLRAALMDLGNAGLEPLGLGGRP*SAYCSR
Trigger: GCGGGAACAATAAGCTGATCAAGGTCTTCCACCGAG...TCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALRPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp GGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTGGCCCTGCTCTTGGCTGCTCTCGCGGATaGGGAAGGTGCCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSAPGIPCCISLESGPALGCSRG*GRCHPA
Trigger: AGCGGGATGGCACCTTCCTCATCCGCGAGAGCAGCC...AAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTGGCCGTGCGGTAGATaGCGCAGTGCTTGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCIWPCGR*RSAWCR
Trigger: GCGACACCAAGCACTGCGTCATCTACCGCACGGCCA...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCGTGGCGGTAGTAGTTCCTTCCTGCCCTaGCCCCAGGTCTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: GAVCPAWHCTGPETRGGSSSFLP*PQVYGL
Trigger: TAAGCCATAGACCTGGGGTCAGGGCAGGAAGGAACT...ACTACCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTCAAGGCTGGCGGCTCTaGTGGCTGCACCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCIQGWRL*WLHQTR
Trigger: CCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCCTTG...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATGGATGGTTAGGTGGCTaGTTGGAGCCCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: RILCISFSLPSRRKRSRYGWLGG*LEPHWP
Trigger: GGGCCAGTGGGGCTCCAAGCAGCCACCTAACCATCC...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTTCAGGTGGGGAGAACTaGTCGGGCAAGTCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TQGRGAVCPAWHCTGPETSGGEN*SGKSGS
Trigger: ACTCCCCGACTTGCCCGAGCAGTTCTCCCCACCTGA...AGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCGAGCGGCGCGGGCAGTaGCAGCAGGAAGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALERRGQ*QQEALN
Trigger: ATTAAGAGCTTCCTGCTGGCACTGCCCGCGCCGCTC...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGCAGTACGCTTCATCTaGAGCTCCTGGGAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYAVRFI*SSWEVR
Trigger: ACGGACCTCCCAGGAGCTGCAGATGAAGCGTACTGC...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222254.13
CDS-3UTR GCA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCGCTGCTCCAGCTTCGTaGGGCTCTCATGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALAAPAS*GSHGSR
Trigger: CCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGC...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCCACTCTGGGCCCGCAGCTGCTaGTCCAGCTTCGTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VLHECVLVLSLIFNPQPLWARSC*SSFVRL
Trigger: GAGCCGCACGAAGCTGGAGCAGCAGCTGCGGGCCCA...GAGTGGCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAACTCAGCATCTCCTCTaGCTGCGTGCGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVTQHLL*LRAVDL
Trigger: AAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGT...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATGTAAACATGGCAGGTaGAGCCAGAAGGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKCKHGR*SQKGLP
Trigger: CGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCTGTAAACATGGCAGGTaGAGCCAGAAGGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWACKHGR*SQKGLP
Trigger: CGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACA...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTACAGTGGCACGATCTCTaGTCACTGCAACCTCCATCT +
Preference number: 4 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVQWHDL*SLQPPS
Trigger: AGATGGAGGTTGCAGTGAGCAGAGATCGTGCCACTG...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGTTACCCAGGCTGGAGTaGAGTGGCACGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPLPRLE*SGTISA
Trigger: AGCAGAGATCGTGCCACTGCACTCCAGCCTGGGTAA...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGTGGGAGGGAGTTGGTaGTGTGGTGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPVGGSW*CGVRSL
Trigger: CAGTGACCTGACACCACACCACCAACTCCCTCCCAC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGCCACCATTCGTCAGCTaGTGGGAGGGAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWPPFVS*WEGVGG
Trigger: ACCACCAACTCCCTCCCACCAGCTGACGAATGGTGG...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGCCACCATTCGTCAGCTaGTGGGAGGGAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: ISSACVRLILPTYQVRSSPPFVS*WEGVGG
Trigger: ACCACCAACTCCCTCCCACCAGCTGACGAATGGTGG...CGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGTTGGCTTGGGGTGCTaGGACCTCTATCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPVGLGC*DLYLQQ
Trigger: CTGCTGGAGATAGAGGTCCCAGCACCCCAAGCCAAC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCGTTGGCTTGGGGTGCTaGGACCTCTATCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVVGLGC*DLYLQQ
Trigger: CTGCTGGAGATAGAGGTCCCAGCACCCCAAGCCAAC...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTGTTGGCTTGGGGTGCTaGGACCTCTATCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSISSACVRLILPTYQVRVGLGC*DLYLQQ
Trigger: CTGCTGGAGATAGAGGTCCCAGCACCCCAAGCCAAC...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTTGCTTGGAGCCCCACTaGCCCCATTGGTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSCLEPH*PHWLKQ
Trigger: CTGCTTCAACCAATGGGGCCAGTGGGGCTCCAAGCA...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCGTCTGGATGGTTAGGTaGCTGCTTGGAGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVVWMVR*LLGAPL
Trigger: CAGTGGGGCTCCAAGCAGCCACCTAACCATCCAGAC...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCGAGTGGGGTGGGGTCTaGATGGTTAGGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLEWGGV*MVRWLL
Trigger: AAGCAGCCACCTAACCATCCAGACCCCACCCCACTC...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGAGTGGGGTGGGGTCTaGATGGTTAGGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPEWGGV*MVRWLL
Trigger: AAGCAGCCACCTAACCATCCAGACCCCACCCCACTC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGCCATGGCCGCGTGAGTaGGGTGGGGTCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: MRSGLRLFMRLSISLLSEPWPRE*GGVWMV
Trigger: AACCATCCAGACCCCACCCCACTCACGCGGCCATGG...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTAGCTTGGCATTGTACTaGGCCAGAGACTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPSLALY*ARDSWR
Trigger: CCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYSHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCCACTCTGGATGTGGCTGGTCTaGTCCGTGGCTCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: VLHECVLVLSLIFNPQPLWMWLV*SVAPAA
Trigger: GGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA...GAGTGGCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGTTAGGACCCCCAACATaGAGAGAGACAGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILLGPPT*RETGAK
Trigger: CTTGGCCCCTGTCTCTCTCCATGTTGGGGGTCCTAA...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGTTTCACTTCGGGGTTTaGAGGGGAAGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRFHFGV*RGSWSL
Trigger: CAGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAA...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGAGCCTCCCAAGTAGCTaGGATTACAGGCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMSLPSS*DYRRPP
Trigger: TGGCGGCCGCCTGTAATCCCAGCTACTTGGGAGGCT...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAAAGCCTCCCAAGTAGCTaGGATTACAGGCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LGQRLVAVVIDEVHNGAESLPSS*DYRRPP
Trigger: TGGCGGCCGCCTGTAATCCCAGCTACTTGGGAGGCT...TTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTGCAACCTCCATCTCCTaGGTTCAAGAGATTCTCACG +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVATSIS*VQEILT
Trigger: CGTGAGAATCTCTTGAACCCAGGAGATGGAGGTTGC...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGCTCCCCAAAAGGCCCTaGGAGGTCCGTGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: ISSACVRLILPTYQVRSSLPKRP*EVRVYS
Trigger: AGAGTACACACGGACCTCCCAGGGCCTTTTGGGGAG...CGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTCTCGGTGGAAGACCTTaGTCAGCTTATTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSLGGRP*SAYCSR
Trigger: GCGGGAACAATAAGCTGATCAAGGTCTTCCACCGAG...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATCAACGGAGCAGAAGGTaGGTGGCTCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYQRSRR*VALRSH
Trigger: ATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTG...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGCCACGCTGTCCTCCTTaGCAATCTGGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMPRCPP*QSGPAG
Trigger: ACCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGG...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTTGCTGCATTTCTCTTaGGTCTGGCCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSLLHFS*VWPCSS
Trigger: TGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAA...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCIRPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTTCCTTCCTGCCCTaGCCCCAGGTCTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPSSFLP*PQVYGL
Trigger: TAAGCCATAGACCTGGGGTCAGGGCAGGAAGGAACT...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCGGCACATCTCAACTCTaGTACGGAGACTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLRLFMRLSISLLSEAWAGTSQL*YGDCSS
Trigger: GCTTGAGCAGTCTCCGTATCAGAGTTGAGATGTGCC...GGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672815.1
CDS-3UTR GCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTCACAGGGGCCGCTCATaGCTCGCTTCAAATTATTCC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSHRGRS*LASNYS
Trigger: GGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGTG...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTTGGGTTGGCTTGGGGTaGTGGGACCTCTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQGRGAVCPAWHCTGPETWVGLG*WDLYLQ
Trigger: CTGGAGATAGAGGTCCCAGCACCCCAAGCCAACCCA...AGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGTCAGGTGGGGAGAACTaGTCGGGCAAGTCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RDLSRSEFSRILCISFSLSGGEN*SGKSGS
Trigger: ACTCCCCGACTTGCCCGAGCAGTTCTCCCCACCTGA...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCTCGGACTAGGAAGGTaGCATCGGGAGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RDLSRSEFSRILCISFSLLGLGR*HRECPG
Trigger: TCCGGGACACTCCCGATGGCACCTTCCTAGTCCGAG...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCAGGTATTCCTTGCTaGATTTCTCTTGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVPGIPC*ISLESG
Trigger: GCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTTTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGCGGATCTTGCGCAGCTaGATGAGGTCCGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: MRSGLRLFMRLSISLLSERILRS*MRSGLR
Trigger: CCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCG...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTGCCCACGTACCAAGTaGGTTCCTCGTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: RILCISFSLPSRRKRSRYCPRTK*VPRGAG
Trigger: TCCCGCACCACGAGGAACGCACTTGGTACGTGGGCA...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTTGTAAACATGGCAGGTaGAGCCAGAAGGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPCKHGR*SQKGLP
Trigger: CGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACA...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAAACGATCTCTGCTCACTaGAACCTCCATCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKTISAH*NLHLLG
Trigger: ACCCAGGAGATGGAGGTTGCAGTGAGCAGAGATCGT...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGCAGTACGCTTCATCTaGAGCTCCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VREPQTRARAGEMRTPGCAVRFI*SSWRRG
Trigger: CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGC...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGGTGGTGTCAGGTCACTaGGCCATTGAGTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWVVSGH*AIESSI
Trigger: GATGGAGGACTCAATGGCCCAGTGACCTGACACCAC...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTGAGGGTCAGCGTGTACTCGCCCTGGATCTTGCTAGAAGCATCTCGGACTAGGCCACCATTCGTCAGCTaGTGGGAGGGAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LRVSVYSPWILLEASRTRPPFVS*WEGVGG
Trigger: ACCACCAACTCCCTCCCACCAGCTGACGAATGGTGG...CCTAGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCTGACCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGAGGGCCACTCGTCACTaGGTCCACCATTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CISFSLPSRRKRSRYSLLRATRH*VHHSSA
Trigger: AGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCT...CAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCGTCTGGATGGTTAGGTaGCTGCTTGGAGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALVWMVR*LLGAPL
Trigger: CAGTGGGGCTCCAAGCAGCCACCTAACCATCCAGAC...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTGGGAGCCACATCAGGTaGGGAGAACTGCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCIGSHIR*GELLGQ
Trigger: TTGCCCGAGCAGTTCTCCCCACCTGATGTGGCTCCC...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTCATTGGCCAGGACTGTaGAGGCCGGCTTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VREPQTRARAGEMRTPGCHWPGL*RPALPW
Trigger: CCAAGGCAAAGCCGGCCTCCACAGTCCTGGCCAATG...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGATCCTCCTTGACAATCTaGTCCTGCTGGTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGSSLTI*SCWYLD
Trigger: GTCCAAATACCAGCAGGACCAGATTGTCAAGGAGGA...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGCTGTTGTCCGAGGCCTaGGCCCGCAGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLELLSEA*ARSCCS
Trigger: GGAGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAG...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RDLSRSEFSRILCISFSLQVRSS*CGRSSS
Trigger: CGAGGACGATCTCCCGCACCACGAGGAACGCACTTG...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATAGACAGAGGGAGATCTaGAGAATGGGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYRQREI*RMGEGR
Trigger: CCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCT...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGTTAGGACCCCCAACATaGAGAGAGACAGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWLGPPT*RETGAK
Trigger: CTTGGCCCCTGTCTCTCTCCATGTTGGGGGTCCTAA...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTTTTCACTTCGGGGTTTaGAGGGGAAGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SCACRSLCCPRPGPAAAAFHFGV*RGSWSL
Trigger: CAGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAA...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGCAGCTCAGCACCTCCTaGGACTCCCCAAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: MRSGLRLFMRLSISLLSEQLSTS*DSPKGP
Trigger: AGGGCCTTTTGGGGAGTCCCAGGAGGTGCTGAGCTG...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCCGGGAAGTCAGGGCTaGGCTCACTCCTGTACGCGG +
Preference number: 4 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQPGSQG*AHSCTR
Trigger: CCGCGTACAGGAGTGAGCCCAGCCCTGACTTCCCGG...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617642.2
CDS-3UTR CCA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGTCTTCTAACGCCTGCTaGGAGGTCCGTGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILSSNAC*EVRVYS
Trigger: AGAGTACACACGGACCTCCCAGCAGGCGTTAGAAGA...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672815.1
3UTR CAA 72 bp TTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: FVRLSWISAMRD*SRSEFSRILCI
Trigger: GATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp TCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCACTGGCCCCATTGGTTaGAGCAGGGCTGGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSSSMSAYWSSVSFLIPSTGPIG*SRAGRV
Trigger: GACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGT...GCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTCTTCCAAGTGTTCCTaGAGCAGCTTCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLSSKCS*SSFSTS
Trigger: GCTGGTGGAGAAGCTGCTTCAGGAACACTTGGAAGA...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGCAACGGAGCAGAAGGTaGGTGGCTCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMQRSRR*VALRSH
Trigger: ATGGCTTCTCAGAGCCACTCACCTTCTGCTCCGTTG...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp TCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGAGGGGGCCACGCTGTCCTCCTTaGCAATCTGGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLKASIAVRFICSSWRRGPRCPP*QSGPAG
Trigger: ACCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGG...CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTTGCTGCATTTCTCTTaGGTCTGGCCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSLLHFS*VWPCSS
Trigger: TGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAA...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp TCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCTTTTTCGGGGGTGGGTaGACTTCTCGCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSSSMSAYWSSVSFLIPSFFGGG*TSRSGP
Trigger: GGGGCCGCTGCGAGAAGTTCACCCACCCCCGAAAAA...GCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTTGGGTTGGCTTGGGGTaGTGGGACCTCTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: VREPQTRARAGEMRTPGCWVGLG*WDLYLQ
Trigger: CTGGAGATAGAGGTCCCAGCACCCCAAGCCAACCCA...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGGAACTCCACATAGGTaGCAGGGAAGTCACCTCGCT +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLGTPHR*QGSHLA
Trigger: AGCGAGGTGACTTCCCTGGCACCTATGTGGAGTTCC...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCAGTCTGTACGCGGTaGGGGCAGCTCCGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIPVCTR*GQLRAV
Trigger: TACCGCCCGGAGCTGCCCGCACCGCGTACAGACTGG...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426902.5
ENST00000617130.5
CDS-3UTR GCA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACAGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTAPGIP*CISLES
Trigger: AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGC...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCTCGTCCTCCATGAGTaGGTACTGGTCCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALLVLHE*VLVLSL
Trigger: GAGACTGAGGACCAGTACGCACTCATGGAGGACGAG...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTACTCAGCATCTCCTCTaGCTGCGTGCGGTTGATCTT +
Preference number: 4 (lower is better)
Translates to: LSISSACVRLILPTYQVRTQHLL*LRAVDL
Trigger: AAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGT...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGAGGTGCCATCCCGCTTaGCACTCAGCATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: MRSGLRLFMRLSISLLSERCHPA*HSASPL
Trigger: CAGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCT...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTAGGTGCCATCCCGCTTaGCACTCAGCATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VALTPEALQVFLAAFLLSRCHPA*HSASPL
Trigger: CAGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCT...ACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCGGGGCGCGCACTGGGTaGGCCAGGGTGACGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KILIVSLKASIAVRFICSGARTG*ARVTVS
Trigger: GCTCACCGTCACCCTGGCGCACCCAGTGCGCGCCCC...GCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCACGATCTCTGCTCACTaGAACCTCCATCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVTISAH*NLHLLG
Trigger: ACCCAGGAGATGGAGGTTGCAGTGAGCAGAGATCGT...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTTACCCAGGCTGGAGTaGAGTGGCACGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMLPRLE*SGTISA
Trigger: AGCAGAGATCGTGCCACTGCACTCCAGCCTGGGTAA...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTAGGGAGTTGGTGGTGTaGTGTCAGGTCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VREPQTRARAGEMRTPGCRELVV*CQVTGP
Trigger: TGGCCCAGTGACCTGACACCACACCACCAACTCCCT...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTTGCTTGGAGCCCCACTaGCCCCATTGGTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VREPQTRARAGEMRTPGCCLEPH*PHWLKQ
Trigger: CTGCTTCAACCAATGGGGCCAGTGGGGCTCCAAGCA...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGAGGGGGTGCTTGGAGCCCCACTaGCCCCATTGGTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLKASIAVRFICSSWRRGCLEPH*PHWLKQ
Trigger: CTGCTTCAACCAATGGGGCCAGTGGGGCTCCAAGCA...CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTAGCTTGGCATTGTACTaGGCCAGAGACTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCISLALY*ARDSWR
Trigger: CCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCT...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RILCISFSLPSRRKRSRYSHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCISHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCTTAGGACCCCCAACATaGAGAGAGACAGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VQQDPLHLFLVALTPEALLGPPT*RETGAK
Trigger: CTTGGCCCCTGTCTCTCTCCATGTTGGGGGTCCTAA...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTCTTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCGCAACCTCCATCTCCTaGGTTCAAGAGATTCTCACG +
Preference number: 4 (lower is better)
Translates to: FFCRAPFWVSHTRYWSRIATSIS*VQEILT
Trigger: CGTGAGAATCTCTTGAACCCAGGAGATGGAGGTTGC...GATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTCTCCCCAAAAGGCCCTaGGAGGTCCGTGTGTACTCT +
Preference number: 4 (lower is better)
Translates to: CPHAGSAPGIPCCISLESLPKRP*EVRVYS
Trigger: AGAGTACACACGGACCTCCCAGGGCCTTTTGGGGAG...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAACTCGGTGGAAGACCTTaGTCAGCTTATTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LGQRLVAVVIDEVHNGAELGGRP*SAYCSR
Trigger: GCGGGAACAATAAGCTGATCAAGGTCTTCCACCGAG...TTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTGCTGCATTTCTCTTaGGTCTGGCCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLLLHFS*VWPCSS
Trigger: TGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAA...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLERQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp GTGTGTACTCTTCATAAAGCTGGTCATACTCGCGGCTCTTGTCCTGGTACTGCTCGGCAATGCGGGACTTaGGCCGCTCGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VCTLHKAGHTRGSCPGTARQCGT*AARSSA
Trigger: TGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCG...AGCAGTACCAGGACAAGAGCCGCGAGTATGACCAGCTTTATGAAGAGTACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGGGAAGTCACCTCGCTaGCGTGTGCGCTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLEGKSPR*RVRSLR
Trigger: CCTCAACGAGCGCACACGGCAGCGAGGTGACTTCCC...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp TCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGAGGGGGGGAACTCCACATAGGTaGCAGGGAAGTCACCTCGCT +
Preference number: 4 (lower is better)
Translates to: SLKASIAVRFICSSWRRGGTPHR*QGSHLA
Trigger: AGCGAGGTGACTTCCCTGGCACCTATGTGGAGTTCC...CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLEKLGAH*LHAVLL
Trigger: AAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTT...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGGCTGCTCCAGCTTCGTaGGGCTCTCATGGATCTCGG +
Preference number: 4 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQAAPAS*GSHGSR
Trigger: CCGAGATCCATGAGAGCCGCACGAAGCTGGAGCAGC...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCGAGGGTCCGCTGGGTTaGCTTGGGGTGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIEGPLG*LGVLGP
Trigger: AGGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTC...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGAGCGTGTACTCGCCCTaGATCTTGCTAGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: FAILARLASNSRPQKIRPSVYSP*ILLEAS
Trigger: AGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCT...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTTCCTCCTTGACAATCTaGTCCTGCTGGTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSSSLTI*SCWYLD
Trigger: GTCCAAATACCAGCAGGACCAGATTGTCAAGGAGGA...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCCACTCCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VLHECVLVLSLIFNPQPLQVRSS*CGRSSS
Trigger: CGAGGACGATCTCCCGCACCACGAGGAACGCACTTG...GAGTGGCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp TCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGAGGGGGAGAAATGAGGACCCCTaGATGTGGCTGGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLKASIAVRFICSSWRRGRNEDP*MWLVWS
Trigger: GGACCAGACCAGCCACATCCAGGGGTCCTCATTTCT...CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTTTAGGACCCCCAACATaGAGAGAGACAGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CPHAGSAPGIPCCISLESLGPPT*RETGAK
Trigger: CTTGGCCCCTGTCTCTCTCCATGTTGGGGGTCCTAA...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
3UTR CAA 72 bp TCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SEFSRILCISFS*PSRRKRSRYSL
Trigger: CAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAACTTCAAATTATTCCATaGCCCTTACAAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKLQIIP*PLQGPL
Trigger: GAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAG...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGTTGCTGCATTTCTCTTaGGTCTGGCCCTGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLLLHFS*VWPCSS
Trigger: TGAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAA...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGTCAGGTGGGGAGAACTaGTCGGGCAAGTCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLESGGEN*SGKSGS
Trigger: ACTCCCCGACTTGCCCGAGCAGTTCTCCCCACCTGA...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGCTCGGACTAGGAAGGTaGCATCGGGAGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLELGLGR*HRECPG
Trigger: TCCGGGACACTCCCGATGGCACCTTCCTAGTCCGAG...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCCCAGGTATTCCTTGCTaGATTTCTCTTGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLPGIPC*ISLESG
Trigger: GCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGG...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EIVLVLHECVLVLSLIFNVRSSW*GRSSSS
Trigger: GGACGAGGACGATCTCCCGCACCACGAGGAACGCAC...ATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp TCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGAGGGGGACGATCTCTGCTCACTaGAACCTCCATCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLKASIAVRFICSSWRRGTISAH*NLHLLG
Trigger: ACCCAGGAGATGGAGGTTGCAGTGAGCAGAGATCGT...CCCCCTCCTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGAGCGTGTACTCGCCCTaGATCTTGCTAGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMSVYSP*ILLEAS
Trigger: AGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCT...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCATCCTCCTTGACAATCTaGTCCTGCTGGTATTTGGAC +
Preference number: 4 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPSSLTI*SCWYLD
Trigger: GTCCAAATACCAGCAGGACCAGATTGTCAAGGAGGA...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCTTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 4 (lower is better)
Translates to: SSSSMSAYWSSVSFLIPSFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...GCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp GTGTGTACTCTTCATAAAGCTGGTCATACTCGCGGCTCTTGTCCTGGTACTGCTAGCCTCCCAAGTAGCTaGGATTACAGGCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VCTLHKAGHTRGSCPGTASLPSS*DYRRPP
Trigger: TGGCGGCCGCCTGTAATCCCAGCTACTTGGGAGGCT...AGCAGTACCAGGACAAGAGCCGCGAGTATGACCAGCTTTATGAAGAGTACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp ATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGCTTCAAATTATTCCATaGCCCTTACAAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: ISSACVRLILPTYQVRSSLQIIP*PLQGPL
Trigger: GAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAG...CGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGCCCAAAAGGCCCTCGTaGGGGGTAAAGGCACATCTC +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLEPKRPS*GVKAHL
Trigger: GAGATGTGCCTTTACCCCTCACGAGGGCCTTTTGGG...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672815.1
CDS-3UTR GCA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGCCAGGTATTCCTTGCTaGATTTCTCTTGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLPGIPC*ISLESG
Trigger: GCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGG...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYAPGIP*CISLES
Trigger: AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGC...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLEASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GTGTGTACTCTTCATAAAGCTGGTCATACTCGCGGCTCTTGTCCTGGTACTGCTAGGTGCCATCCCGCTTaGCACTCAGCATCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VCTLHKAGHTRGSCPGTARCHPA*HSASPL
Trigger: CAGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCT...AGCAGTACCAGGACAAGAGCCGCGAGTATGACCAGCTTTATGAAGAGTACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCGGGGTGGGGTCTGGATaGTTAGGTGGCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIGVGSG*LGGCLE
Trigger: CTCCAAGCAGCCACCTAACCATCCAGACCCCACCCC...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCATTGGCCAGGACTGTaGAGGCCGGCTTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIHWPGL*RPALPW
Trigger: CCAAGGCAAAGCCGGCCTCCACAGTCCTGGCCAATG...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTAGCGTGTACTCGCCCTaGATCTTGCTAGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCISVYSP*ILLEAS
Trigger: AGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCT...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGTTCGTGCGGCTCTCATaGATCTCGGCAATGCGGGAC +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLEFVRLS*ISAMRD
Trigger: GTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAA...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGAGCCACACGAGGTACTaGTCTCGGATCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLESHTRY*SRILRS
Trigger: GCTGCGCAAGATCCGAGACCAGTACCTCGTGTGGCT...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp GTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCCACTCAGACAGAGGGAGATCTaGAGAATGGGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VLHECVLVLSLIFNPQPLRQREI*RMGEGR
Trigger: CCTTCCCTCCCCCATTCTCCAGATCTCCCTCTGTCT...GAGTGGCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTTTCACTTCGGGGTTTaGAGGGGAAGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCIFHFGV*RGSWSL
Trigger: CAGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAA...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATGCAACCTCCATCTCCTaGGTTCAAGAGATTCTCACG +
Preference number: 4 (lower is better)
Translates to: RILCISFSLPSRRKRSRYATSIS*VQEILT
Trigger: CGTGAGAATCTCTTGAACCCAGGAGATGGAGGTTGC...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCAGCTCAGCACCTCCTaGGACTCCCCAAAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIQLSTS*DSPKGP
Trigger: AGGGCCTTTTGGGGAGTCCCAGGAGGTGCTGAGCTG...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GERTPNKSQSRRNEDPWMAPGIP*CISLES
Trigger: AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGC...CATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp GAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATAGGGCCACTCGTCACTaGGTCCACCATTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: EIVLVLHECVLVLSLIFNRATRH*VHHSSA
Trigger: AGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCT...ATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp GTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTTCAAATTATTCCATaGCCCTTACAAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: VALTPEALQVFLAAFLLSLQIIP*PLQGPL
Trigger: GAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAG...ACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp AAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCCGTCCTCGTCCTCCATaGGTGCGTACTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KILIVSLKASIAVRFICSRPRPP*VRTGPQ
Trigger: CTGAGGACCAGTACGCACTCATGGAGGACGAGGACG...GCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp GTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: VALTPEALQVFLAAFLLSIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...ACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTGCTCCAGGTATTCCTTaGTGCATTTCTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCIAPGIP*CISLES
Trigger: AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGC...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp AAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCCCATTTTGGCCAGGCTaGCCTCCAACTCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: KILIVSLKASIAVRFICSPFWPG*PPTPDL
Trigger: GAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGG...GCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR TCA 90 bp CTCTTCAAAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATTTTTTCGGGGGTGGGTaGACTTCTCGCAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LFKDLDSLIEGLNCSTLHFFGGG*TSRSGP
Trigger: GGGGCCGCTGCGAGAAGTTCACCCACCCCCGAAAAA...ATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAAGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp AAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCGCATCTCTTTCTCGTTaGCCTCACGCCGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: KILIVSLKASIAVRFICSASLSR*PHAGSA
Trigger: AGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGC...GCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CCA 90 bp AAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCGTGGTGTCAGGTCACTaGGCCATTGAGTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: KILIVSLKASIAVRFICSVVSGH*AIESSI
Trigger: GATGGAGGACTCAATGGCCCAGTGACCTGACACCAC...GCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCTTTCACTTCGGGGTTTaGAGGGGAAGTTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIFHFGV*RGSWSL
Trigger: CAGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAA...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLEIEGLN*STLHLQ
Trigger: CTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAAT...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR GCA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCAGGTATTCCTTGCTaGATTTCTCTTGAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIPGIPC*ISLESG
Trigger: GCCAGACTCAAGAGAAATGCAGCAAGGAATACCTGG...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR TCA 90 bp CTCTTCAAAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATTCTTCCAAGTGTTCCTaGAGCAGCTTCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LFKDLDSLIEGLNCSTLHSSKCS*SSFSTS
Trigger: GCTGGTGGAGAAGCTGCTTCAGGAACACTTGGAAGA...ATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR GCA 90 bp CTCTTCAAAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATTTCAGCAGGATCCTTTaGATCTCTTTCTCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LFKDLDSLIEGLNCSTLHFSRIL*ISFSLP
Trigger: GGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAA...ATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS GCA 90 bp GCGCGCCTCGGCCGAGGCCTCGGGGGTCACGAGCGGCGCGGGCAGTaGCAGCAGGAAGCTCTTAATGCCGTCAGCCAGGGCTGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: ARLGRGLGGHERRGQ*QQEALNAVSQGCRV
Trigger: GACACGGCAGCCCTGGCTGACGGCATTAAGAGCTTCCTGCTGGCACTGCCCGCGCCGCTCGTGACCCCCGAGGCCTCGGCCGAGGCGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000474310.1
ENST00000617130.5
CDS CCA 90 bp GTTCCTGAAGCAGCTTCTCCACCAGCAGCGCCGGGAAGTCAGGGCTaGGCTCACTCCCGTCGGGAGCGCCCCCTGGCGGCGGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: VPEAASPPAAPGSQG*AHSRRERPLAAART
Trigger: CGTCCTCGCCGCCGCCAGGGGGCGCTCCCGACGGGAGTGAGCCCAGCCCTGACTTCCCGGCGCTGCTGGTGGAGAAGCTGCTTCAGGAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS GCA 90 bp GCGGCTCTGCTGGCTGCACCAGACAAGGGAGCCAAGGGTGCAGGCTaGCACCATGCTCGGCCAGCTGAGGACGCCGACCTGGTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: AALLAAPDKGAKGAG*HHARPAEDADLVAA
Trigger: GGCCGCGACCAGGTCGGCGTCCTCAGCTGGCCGAGCATGGTGGCAGCCTGCACCCTTGGCTCCCTTGTCTGGTGCAGCCAGCAGAGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS GCA 90 bp CACGCCCTCACACGGAGGGCCATGGGCGCCCAAGGCTGGCGGCTCTaGTGGCTGCACCAGACAAGGGAGCCAAGGGTGCAGGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: HALTRRAMGAQGWRL*WLHQTREPRVQAAT
Trigger: GGTGGCAGCCTGCACCCTTGGCTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCCTTGGGCGCCCATGGCCCTCCGTGTGAGGGCGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS CCA 90 bp GCCCTCACACGGAGGGCCATGGGCGCCCAAGGCTGGCGGCTCTGCTaGCTGCACCAGACAAGGGAGCCAAGGGTGCAGGCTGCCACCATG +
Preference number: 5 (lower is better)
Translates to: ALTRRAMGAQGWRLC*LHQTREPRVQAATM
Trigger: CATGGTGGCAGCCTGCACCCTTGGCTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCCTTGGGCGCCCATGGCCCTCCGTGTGAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACGGTTTGGAGGGGAAGTaGGAGTCTGTGGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: WMWLVWSVAPAAAASGADGLEGK*ESVGRV
Trigger: GACCCGCCCCACAGACTCCAACTTCCCCTCCAAACC...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 90 bp CCACATAGGTGCCAGGGAAGTCACCTCGCTGCCGTGTGCGCTCGTTaGGGCCGGGCATCCAGCCCACGCTCTGTGGGCAGCGCTCGCCAC +
Preference number: 5 (lower is better)
Translates to: PHRCQGSHLAAVCAR*GRASSPRSVGSARH
Trigger: GTGGCGAGCGCTGCCCACAGAGCGTGGGCTGGATGCCCGGCCTCAACGAGCGCACACGGCAGCGAGGTGACTTCCCTGGCACCTATGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 90 bp TCACACGGAGGGCCATGGGCGCCCAAGGCTGGCGGCTCTGCTGGCTaGACCAGACAAGGGAGCCAAGGGTGCAGGCTGCCACCATGCTCG +
Preference number: 5 (lower is better)
Translates to: SHGGPWAPKAGGSAG*TRQGSQGCRLPPCS
Trigger: CGAGCATGGTGGCAGCCTGCACCCTTGGCTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCCTTGGGCGCCCATGGCCCTCCGTGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS CCA 90 bp GAGCGCGGTACTGGAAGCCCTCAGGGCCCGCCATGGCCGCGTGAGTaGGGTGGGGTCTGGATGGTTAGGTGGCTGCTTGGAGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: ERGTGSPQGPPWPRE*GGVWMVRWLLGAPL
Trigger: CAGTGGGGCTCCAAGCAGCCACCTAACCATCCAGACCCCACCCCACTCACGCGGCCATGGCGGGCCCTGAGGGCTTCCAGTACCGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCTCCGGCGCAGACGGGCCCAGGGGCGGCTCTGCTTGGGGCGGGTCCTCGGTGCCTTGCTGCATTTCTCTaGAGTCTGGCCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PPAQTGPGAALLGAGPRCLAAFL*SLALLF
Trigger: GAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG...GCACCGAGGACCCGCCCCAAGCAGAGCCGCCCCTGGGCCCGTCTGCGCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 90 bp GGCGGCAGCGCTGGGGGCGCAACCTCCTGCTCTTCCAAGTGTTCCTaGAGCAGCTTCTCCACCAGCAGCGCCGGGAAGTCAGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GGSAGGATSCSSKCS*SSFSTSSAGKSGLG
Trigger: GCCCAGCCCTGACTTCCCGGCGCTGCTGGTGGAGAAGCTGCTTCAGGAACACTTGGAAGAGCAGGAGGTTGCGCCCCCAGCGCTGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGGGAGGGTCCGCTGGGTaGGCTTGGGGTGCTGGGACC +
Preference number: 5 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRGGSAG*AWGAGT
Trigger: GGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTCC...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATGCCGTGTGCGCTCGTaGAGGCCGGGCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTCRVRS*RPGIQP
Trigger: GGGCTGGATGCCCGGCCTCAACGAGCGCACACGGCA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGATGCATGAGGTCCGGCTaGAGGCTGTTCATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LDVAGLVRGSRRRSLRRRCMRSG*RLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCA...TCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TGGATGTGGCTGGTCTGGTCCGTGGCTCCCGCCGCCGCAGCCTCCGGCGCAGACTCTGCCTGCGTGCGGTaGATCTTGCCCACGTACCAA +
Preference number: 5 (lower is better)
Translates to: WMWLVWSVAPAAAASGADSACVR*ILPTYQ
Trigger: TTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGA...GTCTGCGCCGGAGGCTGCGGCGGCGGGAGCCACGGACCAGACCAGCCACATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS CCA 90 bp GGAACGGGTACAGAGCGCGGTACTGGAAGCCCTCAGGGCCCGCCATaGCCGCGTGAGTGGGGTGGGGTCTGGATGGTTAGGTGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GTGTERGTGSPQGPP*PREWGGVWMVRWLL
Trigger: AAGCAGCCACCTAACCATCCAGACCCCACCCCACTCACGCGGCCATGGCGGGCCCTGAGGGCTTCCAGTACCGCGCTCTGTACCCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTGGTTAGGTGGCTGCTaGGAGCCCCACTGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGWLGGC*EPHWPH
Trigger: ATGGGGCCAGTGGGGCTCCAAGCAGCCACCTAACCA...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTGGTGGGCTCCCTCCATaGGCCAGGACTGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVGGLPP*ARTVEA
Trigger: GGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCACC...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATGCCGTGTGCGCTCGTaGAGGCCGGGCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKCRVRS*RPGIQP
Trigger: GGGCTGGATGCCCGGCCTCAACGAGCGCACACGGCA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTGGTGGGCTCCCTCCATaGGCCAGGACTGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SCACRSLCCPRPGPAAAAGGLPP*ARTVEA
Trigger: GGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCACC...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 90 bp AGCAGGAAGCTCTTAATGCCGTCAGCCAGGGCTGCCGTGTCCCACTaGTCCACGTCGCTCAGGGACCAGTCTGTACGCGGTGCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRKLLMPSARAAVSH*STSLRDQSVRGAGS
Trigger: GCTGCCCGCACCGCGTACAGACTGGTCCCTGAGCGACGTGGATCAGTGGGACACGGCAGCCCTGGCTGACGGCATTAAGAGCTTCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000474310.1
ENST00000617130.5
CDS GCA 90 bp CGCGGGCAGTGCCAGCAGGAAGCTCTTAATGCCGTCAGCCAGGGCTaGCGTGTCCCACTGATCCACGTCGCTCAGGGACCAGTCTGTACG +
Preference number: 5 (lower is better)
Translates to: RGQCQQEALNAVSQG*RVPLIHVAQGPVCT
Trigger: CGTACAGACTGGTCCCTGAGCGACGTGGATCAGTGGGACACGGCAGCCCTGGCTGACGGCATTAAGAGCTTCCTGCTGGCACTGCCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000474310.1
ENST00000617130.5
CDS CCA 90 bp GCCCCATTGGTTGAAGCAGGGCTGGGAGGGTCCGCTGGGTTGGCTTaGGGTGCTGGGACCTCTATCTCCAGCAGTCACAGGCGACCACAG +
Preference number: 5 (lower is better)
Translates to: APLVEAGLGGSAGLA*GAGTSISSSHRRPQ
Trigger: CTGTGGTCGCCTGTGACTGCTGGAGATAGAGGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTCCCAGCCCTGCTTCAACCAATGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTGTCCGCTGGGTTGGCTaGGGGTGCTGGGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVVRWVG*GCWDLY
Trigger: ATAGAGGTCCCAGCACCCCAAGCCAACCCAGCGGAC...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGGTCCGCTGGGTTGGCTaGGGGTGCTGGGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRVRWVG*GCWDLY
Trigger: ATAGAGGTCCCAGCACCCCAAGCCAACCCAGCGGAC...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCACACTGGCCCCATTGGTaGAAGCAGGGCTGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGAHWPHW*KQGWEG
Trigger: ACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGTG...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTTGGTTAGGTGGCTGCTaGGAGCCCCACTGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVWLGGC*EPHWPH
Trigger: ATGGGGCCAGTGGGGCTCCAAGCAGCCACCTAACCA...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAAGGTGGGCTCCCTCCATaGGCCAGGACTGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKGGLPP*ARTVEA
Trigger: GGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCACC...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTAGCCGTGTGTCCAGCTaGGCATTGTACTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLASRVSS*ALYWAR
Trigger: TCTGGCCCAGTACAATGCCAAGCTGGACACACGGCT...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVCISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTTGCATGAGGTCCGGCTaGAGGCTGTTCATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLACMRSG*RLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCA...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLAYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTTGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLACVRLI*PTYQVR
Trigger: ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GGGCTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTTCTGCCTGCGTGCGGTaGATCTTGCCCACGTACCAA +
Preference number: 5 (lower is better)
Translates to: GLREAEAGGRAVDDAVLGSACVR*ILPTYQ
Trigger: TTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGA...ACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACAAGGTGCCATCCCGCTaGCCACTCAGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: AEAGGRAVDDAVLGVAVHKVPSR*PLSISS
Trigger: AGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCTT...GTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGCACTGGCCCCATTGGTaGAAGCAGGGCTGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQHWPHW*KQGWEG
Trigger: ACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGTG...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTATCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTATTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVLSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTCCGCGAAGCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LREAEAGGRAVDDAVLGVYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...GACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGCTTCGCGGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCGGGGTTTTGCCATTTaGGCCAGGCTGGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVRGFAI*ARLASN
Trigger: GTTGGAGGCCAGCCTGGCCAAAATGGCAAAACCCCG...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 90 bp TGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CVRLILPTYQVRSSW*GRSSSSSMSAYWLG
Trigger: CCCCAGCCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459743.2
CDS CCA 90 bp AATGGCCTCCACAAGCTTCACCAGAAGAGGGGGAGCCACATCAGGTaGGGAGAACTGCTCGGGCAAGTCGGGGAGTGTGAGGCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: NGLHKLHQKRGSHIR*GELLGQVGECEAWL
Trigger: GAGCCAGGCCTCACACTCCCCGACTTGCCCGAGCAGTTCTCCCCACCTGATGTGGCTCCCCCTCTTCTGGTGAAGCTTGTGGAGGCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS CCA 90 bp GCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: ACVRLILPTYQVRSS*CGRSSSSSMSAYWL
Trigger: CAGCCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459743.2
CDS-3UTR CAA 90 bp GTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCTTACTCGCCCTGGATCTaGCTAGAAGCATCTCGGACT +
Preference number: 5 (lower is better)
Translates to: VLGVAVHYHGAGVAAPLAYSPWI*LEASRT
Trigger: AGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTA...AGCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGCCCAGGGGCCCTCTGTAAACATGGCAGGTGCAGCCAGAAGGGGCTTCCGGGAGTGTCCAGCTTGGCATaGTACTGGGCCAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: SPGALCKHGRCSQKGLPGVSSLA*YWARDS
Trigger: CGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACAC...TCCCGGAAGCCCCTTCTGGCTGCACCTGCCATGTTTACAGAGGGCCCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGCGTCCACGCTGTCCTCCTaGACAATCTGGTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LPGAFLGEPHEVLVSDLASTLSS*TIWSCW
Trigger: CCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGGA...CGCAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: AALMDLGNAGLEPLGVQQCISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...CTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp CTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LEAVHALVDLSVVRGLGPSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...CGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp GCCGAAGCCGGTGGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: AEAGGRAVDDAVLGVAVHRLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...GTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCCACCGGCTTCGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTTGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVCVRLI*PTYQVR
Trigger: ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATCTGCCTGCGTGCGGTaGATCTTGCCCACGTACCAA +
Preference number: 5 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTSACVR*ILPTYQ
Trigger: TTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGAAGGTGCCATCCCGCTaGCCACTCAGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRKVPSR*PLSISS
Trigger: AGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCTT...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 90 bp CTTGGTGGAGAGAGAGAGACTGAGACTCCTAGAGAGATCTCCATGTaGCGCAGCAGTCGCCAGGGAGCCGCAGGGAAGTATGGAGCCGCC +
Preference number: 5 (lower is better)
Translates to: LGGERETETPREISM*RSSRQGAAGKYGAA
Trigger: GGCGGCTCCATACTTCCCTGCGGCTCCCTGGCGACTGCTGCGGCACATGGAGATCTCTCTAGGAGTCTCAGTCTCTCTCTCTCCACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674682.1
ENST00000675271.1
CDS CCA 90 bp GCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTaGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTATCCTCAG +
Preference number: 5 (lower is better)
Translates to: ACVRLILPTYQVRSS*CGRSSSSSMSAYPQ
Trigger: CTGAGGATACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464016.3
CDS-3UTR CAA 90 bp CTCGGCAATGCGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCGTCCGCTGGGTTGGCTaGGGGTGCTGGGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: LGNAGLEPLGVQQDPLHLVRWVG*GCWDLY
Trigger: ATAGAGGTCCCAGCACCCCAAGCCAACCCAGCGGAC...GAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGCACTGGCCCCATTGGTaGAAGCAGGGCTGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWHWPHW*KQGWEG
Trigger: ACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGTG...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATCACTGGCCCCATTGGTaGAAGCAGGGCTGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYHWPHW*KQGWEG
Trigger: ACCCTCCCAGCCCTGCTTCAACCAATGGGGCCAGTG...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTGGTTAGGTGGCTGCTaGGAGCCCCACTGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWWLGGC*EPHWPH
Trigger: ATGGGGCCAGTGGGGCTCCAAGCAGCCACCTAACCA...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCTGGTTAGGTGGCTGCTaGGAGCCCCACTGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: HRVEEPCVQLGIVLGQRLWLGGC*EPHWPH
Trigger: ATGGGGCCAGTGGGGCTCCAAGCAGCCACCTAACCA...GAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGTGGGCTCCCTCCATaGGCCAGGACTGTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VREPQTRARAGEMRTPGCGGLPP*ARTVEA
Trigger: GGCCTCCACAGTCCTGGCCAATGGAGGGAGCCCACC...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CAGCTTCGTGCGGCTCTCATGGATCTCGGCAATGCGGGACTTGAGCCGCTCGGAGTGTCCAGCTTGGCATaGTACTGGGCCAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: QLRAALMDLGNAGLEPLGVSSLA*YWARDS
Trigger: CGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACAC...TCCGAGCGGCTCAAGTCCCGCATTGCCGAGATCCATGAGAGCCGCACGAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTAGCAGCCCCGCTGGCGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: SAWCRRPLPRSRRSSPAGVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...GCCAGCGGGGCTGCTACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: FAILARLASNSRPQKIRPSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: FAILARLASNSRPQKIRPLSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTTGCCACTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCATTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LATQHLLCLRAVDLAHVPLSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...TGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAGTGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWLSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTATGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVCVRLI*PTYQVR
Trigger: ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000464016.3
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGGTTTGGAGGGGAAGTaGGAGTCTGTGGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: FAILARLASNSRPQKIRPGLEGK*ESVGRV
Trigger: GACCCGCCCCACAGACTCCAACTTCCCCTCCAAACC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS CCA 90 bp CACTGGGTCCACCATTCGTCAGCTGGTGGGAGGGAGTTGGTGGTGTaGTGTCAGGTCACTGGGCCATTGAGTCCTCCATCAGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: HWVHHSSAGGRELVV*CQVTGPLSPPSAGE
Trigger: CTCACCTGCTGATGGAGGACTCAATGGCCCAGTGACCTGACACCACACCACCAACTCCCTCCCACCAGCTGACGAATGGTGGACCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS CCA 90 bp GACCCTTACAAGGGCCACTCGTCACTGGGTCCACCATTCGTCAGCTaGTGGGAGGGAGTTGGTGGTGTGGTGTCAGGTCACTGGGCCATT +
Preference number: 5 (lower is better)
Translates to: DPYKGHSSLGPPFVS*WEGVGGVVSGHWAI
Trigger: AATGGCCCAGTGACCTGACACCACACCACCAACTCCCTCCCACCAGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCTTGTAAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCCGCTGGGTTGGCTaGGGGTGCTGGGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLVRWVG*GCWDLY
Trigger: ATAGAGGTCCCAGCACCCCAAGCCAACCCAGCGGAC...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GGCCGTGCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCATACTCGCCCTGGATCTaGCTAGAAGCATCTCGGACT +
Preference number: 5 (lower is better)
Translates to: GRAVDDAVLGVAVHYHGAYSPWI*LEASRT
Trigger: AGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTA...TGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGCACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPCISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATGCATGAGGTCCGGCTaGAGGCTGTTCATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKCMRSG*RLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATCTGCCTGCGTGCGGTaGATCTTGCCCACGTACCAA +
Preference number: 5 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKSACVR*ILPTYQ
Trigger: TTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATCGGGGTTTTGCCATTTaGGCCAGGCTGGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYRGFAI*ARLASN
Trigger: GTTGGAGGCCAGCCTGGCCAAAATGGCAAAACCCCG...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTCGGGGTTTTGCCATTTaGGCCAGGCTGGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSRGFAI*ARLASN
Trigger: GTTGGAGGCCAGCCTGGCCAAAATGGCAAAACCCCG...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 90 bp TGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCCTCCATGAGTGCGTATCCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: CVRLILPTYQVRSSW*GRSSSSSMSAYPQS
Trigger: AGACTGAGGATACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464016.3
CDS-3UTR CAA 90 bp AGGGCAGAGGGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACATCTCGGTGGAAGACCTaGATCAGCTTATTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: RAEGQGDQSHGEGNARRTSRWKT*ISLLFP
Trigger: CGGGAACAATAAGCTGATCAAGGTCTTCCACCGAGA...TGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACCCTCTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCGCCCGGCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTTCTCGGTGGAAGACCTaGATCAGCTTATTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PPGPECHGRGSRKQQSEVSRWKT*ISLLFP
Trigger: CGGGAACAATAAGCTGATCAAGGTCTTCCACCGAGA...AACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGCCGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTAGCCGTGTGTCCAGCTaGGCATTGTACTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPSRVSS*ALYWAR
Trigger: TCTGGCCCAGTACAATGCCAAGCTGGACACACGGCT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GGTCAGGGTGACCAGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATAGCCGTGTGTCCAGCTaGGCATTGTACTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GQGDQSHGEGNARRTRRYSRVSS*ALYWAR
Trigger: TCTGGCCCAGTACAATGCCAAGCTGGACACACGGCT...ATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCTGGTCACCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCCACGCTGTCCTCCTaGACAATCTGGTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FAILARLASNSRPQKIRPSTLSS*TIWSCW
Trigger: CCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGGA...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCCTTGCTGCATTTCTCTaGAGTCTGGCCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RLFMRLSISLLSEAWARSLAAFL*SLALLF
Trigger: GAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp ACACAGGGTAGAGGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: TQGRGAVCPAWHCTGPETCISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...AGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCCTCTACCCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CCAGGTCTATGGCTTAAAAATCAGGGTGCCCAGGCTGGGGCCGCGCAGCCCAGGGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: PGLWLKNQGAQAGAAQPRVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...CCTGGGCTGCGCGGCCCCAGCCTGGGCACCCTGATTTTTAAGCCATAGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VALTPEALQVFLAAFLLSSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...ACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp ATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGTTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: MRSGLRLFMRLSISLLSELSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...CTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCTCAAGCCGGACCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp AGGCTGTTCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RLFMRLSISLLSEAWARSRLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...GCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGAACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp TCATGCGCTTGTCGATCTCTCTGTTGTCCGAGGCCTGGGCCCGCAGCTGCTGCTAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SCACRSLCCPRPGPAAAARLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...AGCAGCAGCTGCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAAGCGCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp ACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTTGCATGAGGTCCGGCTaGAGGCTGTTCATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: TYQVRSSWCGRSSSSSMSCMRSG*RLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCA...ACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp ACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTCTGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: TPNKSQSRRNEDPWMWLVCVRLI*PTYQVR
Trigger: ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA...GACCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGAAGGTGCCATCCCGCTaGCCACTCAGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EPQTRARAGEMRTPGCGWKVPSR*PLSISS
Trigger: AGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCTT...CCAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTGGTTTGGAGGGGAAGTaGGAGTCTGTGGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: VALTPEALQVFLAAFLLSGLEGK*ESVGRV
Trigger: GACCCGCCCCACAGACTCCAACTTCCCCTCCAAACC...ACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 90 bp CAGGCGACCACAGGGGCCGCTCATGCCTCGCTTCAAATTATTCCATaGCCCTTACAAGGGCCACTCGTCACTGGGTCCACCATTCGTCAG +
Preference number: 5 (lower is better)
Translates to: QATTGAAHASLQIIP*PLQGPLVTGSTIRQ
Trigger: CTGACGAATGGTGGACCCAGTGACGAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGTGGTCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGAGCCATGGAGAGGGCAATGCCCGGAGGACACGTAGATATGGGGTGGGGGAGTTACTCGCCCTGGATCTaGCTAGAAGCATCTCGGACT +
Preference number: 5 (lower is better)
Translates to: RAMERAMPGGHVDMGWGSYSPWI*LEASRT
Trigger: AGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTA...ACTCCCCCACCCCATATCTACGTGTCCTCCGGGCATTGCCCTCTCCATGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGGTGTCCAGCTTGGCATaGTACTGGGCCAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLVSSLA*YWARDS
Trigger: CGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACAC...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGTCCACGCTGTCCTCCTaGACAATCTGGTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLSTLSS*TIWSCW
Trigger: CCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGGA...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCTGCATGAGGTCCGGCTaGAGGCTGTTCATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: VQQDPLHLFLVALTPEALCMRSG*RLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCA...GAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp AGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTGGCTGTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RTPNKSQSRRNEDPWMWLYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...CAGCCACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGTCTGCCTGCGTGCGGTaGATCTTGCCCACGTACCAA +
Preference number: 5 (lower is better)
Translates to: CISFSLPSRRKRSRYSLLSACVR*ILPTYQ
Trigger: TTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGA...CAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCGTTTCACTTCGGGGTTaGGAGGGGAAGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: RLILPTYQVRSSWCGRSSVSLRG*EGKLES
Trigger: AGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAAC...GGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 90 bp GGACCTCTATCTCCAGCAGTCACAGGCGACCACAGGGGCCGCTCATaGCTCGCTTCAAATTATTCCATGACCCTTACAAGGGCCACTCGT +
Preference number: 5 (lower is better)
Translates to: GPLSPAVTGDHRGRS*LASNYSMTLTRATR
Trigger: ACGAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGTGGTCGCCTGTGACTGCTGGAGATAGAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 90 bp CTTGTCCTGGTACTGCTGGTGATAGACCTTAAGCTGGGCGCCCACTaGCTCCACGCTGTCCTCCTTGACAATCTGGTCCTGGAGATACGT +
Preference number: 5 (lower is better)
Translates to: LVLVLLVIDLKLGAH*LHAVLLDNLVLEIR
Trigger: ACGTATCTCCAGGACCAGATTGTCAAGGAGGACAGCGTGGAGGCAGTGGGCGCCCAGCTTAAGGTCTATCACCAGCAGTACCAGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675271.1
CDS-3UTR CAA 90 bp TTCTTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCACCTTGATCAGCTTATaGTTCCCGCCTTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: FFCRAPFWVSHTRYWSRITLISL*FPPFLR
Trigger: CCTCAGGAAAGGCGGGAACAATAAGCTGATCAAGGT...GATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATCTCGGTGGAAGACCTaGATCAGCTTATTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKSRWKT*ISLLFP
Trigger: CGGGAACAATAAGCTGATCAAGGTCTTCCACCGAGA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTCTTCCACGCTGTCCTCCTaGACAATCTGGTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CPHAGSAPGIPCCISLESSTLSS*TIWSCW
Trigger: CCAGCAGGACCAGATTGTCAAGGAGGACAGCGTGGA...AGACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GAGGGTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGCTTGCTGCATTTCTCTaGAGTCTGGCCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: EGERTPNKSQSRRNEDPWLAAFL*SLALLF
Trigger: GAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG...CCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTCTTGCTGCATTTCTCTaGAGTCTGGCCCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSISSACVRLILPTYQVRLAAFL*SLALLF
Trigger: GAAGAGCAGGGCCAGACTCAAGAGAAATGCAGCAAG...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GGAGCCGTGTGTCCAGCTTGGCATTGTACTGGGCCAGAGACTCGTGGCGGTAGTGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: GAVCPAWHCTGPETRGGSVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...ACTACCGCCACGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACACACGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPRLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LSISSACVRLILPTYQVRRLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGGATCCTTTGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RILCISFSLPSRRKRSRYYWSRI*RSCMRS
Trigger: GGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTA...ATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCAAAGGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGAAGGTGCCATCCCGCTaGCCACTCAGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RDLSRSEFSRILCISFSLKVPSR*PLSISS
Trigger: AGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCTT...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTGTTTCACTTCGGGGTTaGGAGGGGAAGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPVSLRG*EGKLES
Trigger: AGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAAC...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TTTGCCATTTTGGCCAGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGGTTTCACTTCGGGGTTaGGAGGGGAAGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: FAILARLASNSRPQKIRPVSLRG*EGKLES
Trigger: AGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAAC...CGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCTGGCCAAAATGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS CCA 90 bp CTCGCTTCAAATTATTCCATGACCCTTACAAGGGCCACTCGTCACTaGGTCCACCATTCGTCAGCTGGTGGGAGGGAGTTGGTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LASNYSMTLTRATRH*VHHSSAGGRELVVW
Trigger: CCACACCACCAACTCCCTCCCACCAGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTACCTTGATCAGCTTATaGTTCCCGCCTTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPTLISL*FPPFLR
Trigger: CCTCAGGAAAGGCGGGAACAATAAGCTGATCAAGGT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATCTGCAGCTCCTGGAGGGTTTGGAGGGGAAGTaGGAGTCTGTGGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: DSLIEGLNCSTLHLQLLEGLEGK*ESVGRV
Trigger: GACCCGCCCCACAGACTCCAACTTCCCCTCCAAACC...CTCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCGGGGTTTTGCCATTTaGGCCAGGCTGGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQRGFAI*ARLASN
Trigger: GTTGGAGGCCAGCCTGGCCAAAATGGCAAAACCCCG...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 90 bp ACCAAGTGCGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATaGGTGCGTATCCTCAGTCTCATTTTTAATCCCCAGCCACTCGTT +
Preference number: 5 (lower is better)
Translates to: TKCVPRGAGDRPRPP*VRILSLIFNPQPLV
Trigger: AACGAGTGGCTGGGGATTAAAAATGAGACTGAGGATACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464016.3
CDS-3UTR CAA 90 bp TGCATCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGACCTTGATCAGCTTATaGTTCCCGCCTTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: CISFSLPSRRKRSRYSLLTLISL*FPPFLR
Trigger: CCTCAGGAAAGGCGGGAACAATAAGCTGATCAAGGT...CAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGAGCCGTGTGTCCAGCTaGGCATTGTACTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQSRVSS*ALYWAR
Trigger: TCTGGCCCAGTACAATGCCAAGCTGGACACACGGCT...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCGGTAGATGACGCAGTGCTTGGTGTCGCCGTCCACTACCACGGAGCAGGCGTATGCTCTTCAAAGATCTaGATAGTCTCATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: AVDDAVLGVAVHYHGAGVCSSKI*IVSLKA
Trigger: GGCCTTCAATGAGACTATCAAGATCTTTGAAGAGCA...TACGCCTGCTCCGTGGTAGTGGACGGCGACACCAAGCACTGCGTCATCTACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTGGGCCAGAGACTCGTGGCGGTAGTGATTGATGAGGTCCACAACGGAGCAGAAGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: LGQRLVAVVIDEVHNGAEVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...TTCTGCTCCGTTGTGGACCTCATCAATCACTACCGCCACGAGTCTCTGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATTCGGCAATGCGGGACTaGAGCCGCTCGGAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EIVLVLHECVLVLSLIFNSAMRD*SRSEFS
Trigger: GCTGAACTCCGAGCGGCTCAAGTCCCGCATTGCCGA...ATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCTTGTCGATCTCTCTGTaGTCCGAGGCCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLILSISL*SEAWAR
Trigger: GCGGGCCCAGGCCTCGGACAACAGAGAGATCGACAA...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp CGGGACTTGAGCCGCTCGGAGTTCAGCAGGATCCTTTGCATCTCTTTCTCGTTGAGGCTGTTCATGCGCTaGTCGATCTCTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RDLSRSEFSRILCISFSLRLFMR*SISLLS
Trigger: GGACAACAGAGAGATCGACAAGCGCATGAACAGCCT...CAACGAGAAAGAGATGCAAAGGATCCTGCTGAACTCCGAGCGGCTCAAGTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp TCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCTGCGTGCGGTTGATCTaGCCCACGTACCAAGTGCGT +
Preference number: 5 (lower is better)
Translates to: SSSSSMSAYWSSVSFLIPCVRLI*PTYQVR
Trigger: ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCA...GGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTGTTTCACTTCGGGGTTaGGAGGGGAAGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCIVSLRG*EGKLES
Trigger: AGACTCCAACTTCCCCTCCAAACCCCGAAGTGAAAC...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTCTTCAAAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATTGCCGTGTGCGCTCGTaGAGGCCGGGCATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LFKDLDSLIEGLNCSTLHCRVRS*RPGIQP
Trigger: GGGCTGGATGCCCGGCCTCAACGAGCGCACACGGCA...ATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTACCTTGATCAGCTTATaGTTCCCGCCTTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCITLISL*FPPFLR
Trigger: CCTCAGGAAAGGCGGGAACAATAAGCTGATCAAGGT...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TCTCTTTCTCGTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCGGTGGAAGACCTaGATCAGCTTATTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: SLSRCPHAGSAPGIPCCISRWKT*ISLLFP
Trigger: CGGGAACAATAAGCTGATCAAGGTCTTCCACCGAGA...AATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAACGAGAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CGTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCATCTTGATAGTCTCATaGAAGGCCTCAATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: RSSWCGRSSSSSMSAYWSILIVS*KASIAV
Trigger: TACTGCAATTGAGGCCTTCAATGAGACTATCAAGAT...GGACCAGTACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp AGGCTGGCCTCCAACTCCCGACCTCAAAAGATCCGCCCGTCTTGGCCTCCCAAATGCTCTTCAAAGATCTaGATAGTCTCATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RLASNSRPQKIRPSWPPKCSSKI*IVSLKA
Trigger: GGCCTTCAATGAGACTATCAAGATCTTTGAAGAGCA...TTTGGGAGGCCAAGACGGGCGGATCTTTTGAGGTCGGGAGTTGGAGGCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp TTCTGCCGGGCGCCTTTCTGGGTGAGCCACACGAGGTACTGGTCTCGGATCTTGTGCTCTTCAAAGATCTaGATAGTCTCATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: FCRAPFWVSHTRYWSRILCSSKI*IVSLKA
Trigger: GGCCTTCAATGAGACTATCAAGATCTTTGAAGAGCA...CAAGATCCGAGACCAGTACCTCGTGTGGCTCACCCAGAAAGGCGCCCGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCTGCATCTCTTTCTCGTaGCCCTCACGCCGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLICISFS*PSRRKR
Trigger: GCGCTTCCGGCGTGAGGGCAACGAGAAAGAGATGCA...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp GTTGCCCTCACGCCGGAAGCGCTCCAGGTATTCCTTGCTGCATTTCTCTTGAGTGTTCAGCAGGATCCTTaGCATCTCTTTCTCGTTGCC +
Preference number: 5 (lower is better)
Translates to: VALTPEALQVFLAAFLLSVQQDP*HLFLVA
Trigger: GGCAACGAGAAAGAGATGCAAAGGATCCTGCTGAAC...ACTCAAGAGAAATGCAGCAAGGAATACCTGGAGCGCTTCCGGCGTGAGGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS-3UTR CAA 90 bp TCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGCTACTCGCCCTGGATCTaGCTAGAAGCATCTCGGACT +
Preference number: 5 (lower is better)
Translates to: SSSSMSAYWSSVSFLIPSYSPWI*LEASRT
Trigger: AGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTA...GCTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTCAGCATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTGCTCTTCAAAGATCTaGATAGTCTCATTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LSISSACVRLILPTYQVRCSSKI*IVSLKA
Trigger: GGCCTTCAATGAGACTATCAAGATCTTTGAAGAGCA...ACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGATGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp AGATCGTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCAAGGTGCCATCCCGCTaGCCACTCAGCATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RSSSSSMSAYWSSVSFLIKVPSR*PLSISS
Trigger: AGAGGAGATGCTGAGTGGCAAGCGGGATGGCACCTT...GATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGACGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp ATCTCCTCTGCCTGCGTGCGGTTGATCTTGCCCACGTACCAAGTGCGTTCCTCGATCTTGATAGTCTCATaGAAGGCCTCAATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: ISSACVRLILPTYQVRSSILIVS*KASIAV
Trigger: TACTGCAATTGAGGCCTTCAATGAGACTATCAAGAT...CGAGGAACGCACTTGGTACGTGGGCAAGATCAACCGCACGCAGGCAGAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GCCCCGAATGTCACGGCCGAGGTTCTCGGAAGCAGCAGAGTGAAGTTCCTTCCTATCTTGATAGTCTCATaGAAGGCCTCAATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: APNVTAEVLGSSRVKFLPILIVS*KASIAV
Trigger: TACTGCAATTGAGGCCTTCAATGAGACTATCAAGAT...AGGAAGGAACTTCACTCTGCTGCTTCCGAGAACCTCGGCCGTGACATTCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTGAGAGAACCCCAAACAAGAGCCAGAGCCGGAGAAATGAGGACCCCTGGATGTATCTTGATAGTCTCATaGAAGGCCTCAATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: VREPQTRARAGEMRTPGCILIVS*KASIAV
Trigger: TACTGCAATTGAGGCCTTCAATGAGACTATCAAGAT...ACATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGGGTTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp CTCTTCAAAGATCTTGATAGTCTCATTGAAGGCCTCAATTGCAGTACGCTTCATGTGTCCAGCTTGGCATaGTACTGGGCCAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: LFKDLDSLIEGLNCSTLHVSSLA*YWARDS
Trigger: CGAGTCTCTGGCCCAGTACAATGCCAAGCTGGACAC...ATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS-3UTR CAA 90 bp GTCCTCGTCCTCCATGAGTGCGTACTGGTCCTCAGTCTCATTTTTAATCCCCAGATCTTGATAGTCTCATaGAAGGCCTCAATTGCAGTA +
Preference number: 5 (lower is better)
Translates to: VLVLHECVLVLSLIFNPQILIVS*KASIAV
Trigger: TACTGCAATTGAGGCCTTCAATGAGACTATCAAGAT...CTGGGGATTAAAAATGAGACTGAGGACCAGTACGCACTCATGGAGGACGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
ENST00000672815.1
CDS GCA 72 bp AGGTGCTGGAGCAGGAAGCGCAGCGTGAGCGCGCGGTaGAGCGGCAGCGTCGGTGGCTCCAGCGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: RCWSRKRSVSAR*SGSVGGSSAGP
Trigger: GGGGCCGGCGCTGGAGCCACCGACGCTGCCGCTGCACCGCGCGCTCACGCTGCGCTTCCTGCTCCAGCACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000474310.1
CDS CCA 72 bp GCGCTCGTTGAGGCCGGGCATCCAGCCCACGCTCTGTaGGCAGCGCTCGCCACCCTCGGCCACGCCCAGCGC +
Preference number: 6 (lower is better)
Translates to: ALVEAGHPAHAL*AALATLGHAQR
Trigger: GCGCTGGGCGTGGCCGAGGGTGGCGAGCGCTGCCCACAGAGCGTGGGCTGGATGCCCGGCCTCAACGAGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 72 bp AGCCAAGGGTGCAGGCTGCCACCATGCTCGGCCAGCTaGGGACGCCGACCTGGTCGCGGCCGCCACCGCCGC +
Preference number: 6 (lower is better)
Translates to: SQGCRLPPCSAS*GRRPGRGRHRR
Trigger: GCGGCGGTGGCGGCCGCGACCAGGTCGGCGTCCTCAGCTGGCCGAGCATGGTGGCAGCCTGCACCCTTGGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS CCA 72 bp GCAGCTTCTCCACCAGCAGCGCCGGGAAGTCAGGGCTaGGCTCACTCCCGTCGGGAGCGCCCCCTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: AASPPAAPGSQG*AHSRRERPLAA
Trigger: CGCCGCCAGGGGGCGCTCCCGACGGGAGTGAGCCCAGCCCTGACTTCCCGGCGCTGCTGGTGGAGAAGCTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000426902.5
CDS GCA 72 bp GGCCGAGGCCTCGGGGGTCACGAGCGGCGCGGGCAGTaGCAGCAGGAAGCTCTTAATGCCGTCAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: GRGLGGHERRGQ*QQEALNAVSQG
Trigger: GCCCTGGCTGACGGCATTAAGAGCTTCCTGCTGGCACTGCCCGCGCCGCTCGTGACCCCCGAGGCCTCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000474310.1
ENST00000617130.5
CDS GCA 72 bp GGGCCATGGGCGCCCAAGGCTGGCGGCTCTGCTGGCTaGACCAGACAAGGGAGCCAAGGGTGCAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GPWAPKAGGSAG*TRQGSQGCRLP
Trigger: TGGCAGCCTGCACCCTTGGCTCCCTTGTCTGGTGCAGCCAGCAGAGCCGCCAGCCTTGGGCGCCCATGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS TCA 72 bp TGCCAGGGAAGTCACCTCGCTGCCGTGTGCGCTCGTTaGGGCCGGGCATCCAGCCCACGCTCTGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: CQGSHLAAVCAR*GRASSPRSVGS
Trigger: GCTGCCCACAGAGCGTGGGCTGGATGCCCGGCCTCAACGAGCGCACACGGCAGCGAGGTGACTTCCCTGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS CAA 72 bp GTGCCAGGGAAGTCACCTCGCTGCCGTGTGCGCTCGTaGAGGCCGGGCATCCAGCCCACGCTCTGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: VPGKSPRCRVRS*RPGIQPTLCGQ
Trigger: CTGCCCACAGAGCGTGGGCTGGATGCCCGGCCTCAACGAGCGCACACGGCAGCGAGGTGACTTCCCTGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS CCA 72 bp ACAGAGCGCGGTACTGGAAGCCCTCAGGGCCCGCCATaGCCGCGTGAGTGGGGTGGGGTCTGGATGGTTAGG +
Preference number: 6 (lower is better)
Translates to: TERGTGSPQGPP*PREWGGVWMVR
Trigger: CCTAACCATCCAGACCCCACCCCACTCACGCGGCCATGGCGGGCCCTGAGGGCTTCCAGTACCGCGCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 72 bp AGCAGGGCTGGGAGGGTCCGCTGGGTTGGCTTGGGGTaGTGGGACCTCTATCTCCAGCAGTCACAGGCGACC +
Preference number: 6 (lower is better)
Translates to: SRAGRVRWVGLG*WDLYLQQSQAT
Trigger: GGTCGCCTGTGACTGCTGGAGATAGAGGTCCCAGCACCCCAAGCCAACCCAGCGGACCCTCCCAGCCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 72 bp TCAGGTCACTGGGCCATTGAGTCCTCCATCAGCAGGTaGGGCTGGGGCAGGCCGCTCACGCCCTCACACGGA +
Preference number: 6 (lower is better)
Translates to: SGHWAIESSISR*GWGRPLTPSHG
Trigger: TCCGTGTGAGGGCGTGAGCGGCCTGCCCCAGCCTCACCTGCTGATGGAGGACTCAATGGCCCAGTGACCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS CCA 72 bp GTGCCGCAGCAGTCGCCAGGGAGCCGCAGGGAAGTATaGAGCCGCCACTTACACGAGGTACTGGTCTCGGAT +
Preference number: 6 (lower is better)
Translates to: VPQQSPGSRREV*SRHLHEVLVSD
Trigger: ATCCGAGACCAGTACCTCGTGTAAGTGGCGGCTCCATACTTCCCTGCGGCTCCCTGGCGACTGCTGCGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674682.1
ENST00000675271.1
CDS TCA 72 bp CTCTTAATGCCGTCAGCCAGGGCTGCCGTGTCCCACTaGTCCACGTCGCTCAGGGACCAGTCTGTACGCGGT +
Preference number: 6 (lower is better)
Translates to: LLMPSARAAVSH*STSLRDQSVRG
Trigger: ACCGCGTACAGACTGGTCCCTGAGCGACGTGGATCAGTGGGACACGGCAGCCCTGGCTGACGGCATTAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000474310.1
ENST00000617130.5
CDS TCA 72 bp GCTGGGGGCGCAACCTCCTGCTCTTCCAAGTGTTCCTaGAGCAGCTTCTCCACCAGCAGCGCCGGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: AGGATSCSSKCS*SSFSTSSAGKS
Trigger: TGACTTCCCGGCGCTGCTGGTGGAGAAGCTGCTTCAGGAACACTTGGAAGAGCAGGAGGTTGCGCCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS CCA 72 bp AAGGGCCACTCGTCACTGGGTCCACCATTCGTCAGCTaGTGGGAGGGAGTTGGTGGTGTGGTGTCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: KGHSSLGPPFVS*WEGVGGVVSGH
Trigger: GTGACCTGACACCACACCACCAACTCCCTCCCACCAGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222254.13
ENST00000617130.5
ENST00000617642.2
CDS CCA 72 bp GGAGATACGTGGCGGAATGAGGGGAGATGCATAGCCTaGTCGGGTCTACCTAGGAAACTGAGGCCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: GDTWRNEGRCIA*SGLPRKLRPGA
Trigger: GGCCCCAGGCCTCAGTTTCCTAGGTAGACCCGACCAGGCTATGCATCTCCCCTCATTCCGCCACGTATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675271.1
CDS CAA 72 bp GGAGCCGCCACTTACACGAGGTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCCGGCTTGAGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: GAATYTRYWSRI*RSCMRSGLRLF
Trigger: GAACAGCCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTACCTCGTGTAAGTGGCGGCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674682.1
ENST00000675271.1
CDS CCA 72 bp ACAGGCCCCCACCTGAGGGTCAGCGTGTACTCGCCCTaGATCTTGCTAGAAGCATCTCGGACTAGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: TGPHLRVSVYSP*ILLEASRTRKV
Trigger: CACCTTCCTAGTCCGAGATGCTTCTAGCAAGATCCAGGGCGAGTACACGCTGACCCTCAGGTGGGGGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600533.2
CDS CAA 90 bp GGGAAGTATGGAGCCGCCACTTACACGAGGTACTGGTCTCGGATCTaGCGCAGCTGCATGAGGTCCGGCTTGAGGCTGTTCATGCGCTTG +
Preference number: 6 (lower is better)
Translates to: GKYGAATYTRYWSRI*RSCMRSGLRLFMRL
Trigger: CAAGCGCATGAACAGCCTCAAGCCGGACCTCATGCAGCTGCGCAAGATCCGAGACCAGTACCTCGTGTAAGTGGCGGCTCCATACTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674682.1
ENST00000675271.1
CDS TCA 72 bp GCACATGTTCTATCCCCTCTGAACTCCCGGTCTCTGTaGCCTGTGACCCCCGGTTATCCTTGCAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: AHVLSPLNSRSL*PVTPGYPCRDR
Trigger: CCTGTCCCTGCAAGGATAACCGGGGGTCACAGGTCACAGAGACCGGGAGTTCAGAGGGGATAGAACATGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600533.2
CDS GCA 72 bp GAGAGAGAGACTGAGACTCCTAGAGAGATCTCCATGTaGCGCAGCAGTCGCCAGGGAGCCGCAGGGAAGTAT +
Preference number: 6 (lower is better)
Translates to: ERETETPREISM*RSSRQGAAGKY
Trigger: ATACTTCCCTGCGGCTCCCTGGCGACTGCTGCGGCACATGGAGATCTCTCTAGGAGTCTCAGTCTCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674682.1
ENST00000675271.1
CDS TCA 72 bp ACAGGGGCCGCTCATGCCTCGCTTCAAATTATTCCATaGCCCTTACAAGGGCCACTCGTCACTGGGTCCACC +
Preference number: 6 (lower is better)
Translates to: TGAAHASLQIIP*PLQGPLVTGST
Trigger: GGTGGACCCAGTGACGAGTGGCCCTTGTAAGGGTCATGGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 72 bp TTGATCTTGCCCACGTACCAAGTGCGTTCCTCGTGGTaGGGGAGATCGTCCTCGTCCTCCATGAGTGCGTAT +
Preference number: 6 (lower is better)
Translates to: LILPTYQVRSSW*GRSSSSSMSAY
Trigger: ATACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAACGCACTTGGTACGTGGGCAAGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464016.3
CDS GCA 72 bp TCTGGTCCTGGAGATACGTGGCGGAATGAGGGGAGATaGATAGCCTGGTCGGGTCTACCTAGGAAACTGAGG +
Preference number: 6 (lower is better)
Translates to: SGPGDTWRNEGR*IAWSGLPRKLR
Trigger: CCTCAGTTTCCTAGGTAGACCCGACCAGGCTATGCATCTCCCCTCATTCCGCCACGTATCTCCAGGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675271.1
CDS GCA 72 bp TCTCCAGCAGTCACAGGCGACCACAGGGGCCGCTCATaGCTCGCTTCAAATTATTCCATGACCCTTACAAGG +
Preference number: 6 (lower is better)
Translates to: SPAVTGDHRGRS*LASNYSMTLTR
Trigger: CCTTGTAAGGGTCATGGAATAATTTGAAGCGAGGCATGAGCGGCCCCTGTGGTCGCCTGTGACTGCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS TCA 72 bp GTTCCTCGTGGTGCGGGAGATCGTCCTCGTCCTCCATaGGTGCGTATCCTCAGTCTCATTTTTAATCCCCAG +
Preference number: 6 (lower is better)
Translates to: VPRGAGDRPRPP*VRILSLIFNPQ
Trigger: CTGGGGATTAAAAATGAGACTGAGGATACGCACTCATGGAGGACGAGGACGATCTCCCGCACCACGAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464016.3
CDS CCA 72 bp AATTATTCCATGACCCTTACAAGGGCCACTCGTCACTaGGTCCACCATTCGTCAGCTGGTGGGAGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: NYSMTLTRATRH*VHHSSAGGREL
Trigger: CAACTCCCTCCCACCAGCTGACGAATGGTGGACCCAGTGACGAGTGGCCCTTGTAAGGGTCATGGAATAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222254.13
ENST00000426902.5
ENST00000617130.5
ENST00000617642.2
CDS GCA 72 bp TTCAAAGATCTTGATAGTCTCATTGAAGGCCTCAATTaGAGTACGCTTCATCTGCAGCTCCTGGGAGGTCCG +
Preference number: 6 (lower is better)
Translates to: FKDLDSLIEGLN*STLHLQLLGGP
Trigger: CGGACCTCCCAGGAGCTGCAGATGAAGCGTACTGCAATTGAGGCCTTCAATGAGACTATCAAGATCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222254.13
ENST00000675271.1
CDS CAA 72 bp TCCACAAAATGGAATGGGATAGGAGTGACACTCCCATaGCACACACCTCTGACTAAGCTGAGGCTGACCTAT +
Preference number: 6 (lower is better)
Translates to: STKWNGIGVTLP*HTPLTKLRLTY
Trigger: ATAGGTCAGCCTCAGCTTAGTCAGAGGTGTGTGCAATGGGAGTGTCACTCCTATCCCATTCCATTTTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674682.1
ENST00000675271.1
CDS CCA 72 bp GGAATTTTTGTGGAAGGCTTCCAACTTTCCACAAAATaGAATGGGATAGGAGTGACACTCCCATTGCACACA +
Preference number: 6 (lower is better)
Translates to: GIFVEGFQLSTK*NGIGVTLPLHT
Trigger: TGTGTGCAATGGGAGTGTCACTCCTATCCCATTCCATTTTGTGGAAAGTTGGAAGCCTTCCACAAAAATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674682.1
ENST00000675271.1