RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3R1 (Homo sapiens)

Ensembl gene IDs: ENSG00000145675

Ensembl transcript IDs: ENST00000320694.12, ENST00000336483.9, ENST00000517412.1, ENST00000517643.1, ENST00000517698.5, ENST00000518292.1, ENST00000518813.5, ENST00000519025.5, ENST00000520550.1, ENST00000520675.1, ENST00000521381.6, ENST00000521409.5, ENST00000521657.5, ENST00000522084.5, ENST00000523807.5, ENST00000523872.1

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTaGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCT +
Preference number: 1 (lower is better)
Translates to: VSGSTVHSNIQAKPG*TKPSQARVLLPLSP
Trigger: AGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR GCA 90 bp CGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATC +
Preference number: 1 (lower is better)
Translates to: RFCSSIHRSDWRGAL*FPEASGWLNFRRRI
Trigger: GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR GCA 90 bp GTGAGGTCCCAATGCTCCCACTTCTACGCCCAATCACAGCCTCACTaGAGCTTAGCTTCTGGCTTTATCTTTAGGATGCTACACTGGGTG +
Preference number: 1 (lower is better)
Translates to: VRSQCSHFYAQSQPH*SLASGFIFRMLHWV
Trigger: CACCCAGTGTAGCATCCTAAAGATAAAGCCAGAAGCTAAGCTGCAGTGAGGCTGTGATTGGGCGTAGAAGTGGGAGCATTGGGACCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CCA 90 bp AAAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTaGAGAGGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAAC +
Preference number: 1 (lower is better)
Translates to: KERWLRFCSSIHRSD*RGALCFPEASGWLN
Trigger: GTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTaGACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTC +
Preference number: 1 (lower is better)
Translates to: LQNEIIHSAMCLGPP*TATSRLNQAGPNLL
Trigger: GAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR GCA 90 bp TTTCACATGGTTATGATCTCTCGTGTGTGTAATGTGAGGTCCCAATaGTCCCACTTCTACGCCCAATCACAGCCTCACTGCAGCTTAGCT +
Preference number: 1 (lower is better)
Translates to: FHMVMISRVCNVRSQ*SHFYAQSQPHCSLA
Trigger: AGCTAAGCTGCAGTGAGGCTGTGATTGGGCGTAGAAGTGGGAGCATTGGGACCTCACATTACACACACGAGAGATCATAACCATGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR TCA 90 bp GAGTGGACGTGCCTTTCTGCTACATATCGTTCATTTGTTACAAAATaGAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGC +
Preference number: 1 (lower is better)
Translates to: EWTCLSATYRSFVTK*NNPQCDVSGSTVHS
Trigger: GCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAAATGAACGATATGTAGCAGAAAGGCACGTCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR CCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTaGGCAAGCTACACTGTAATCAAAAAGGCATTGGGCAGAACAGGT +
Preference number: 1 (lower is better)
Translates to: IQSGRLAKYLKRQMR*ASYTVIKKALGRTG
Trigger: ACCTGTTCTGCCCAATGCCTTTTTGATTACAGTGTAGCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR TCA 90 bp GAAGAAGCAACTTCACTTTGCAGTTATTCACTTCTCTGTAAATCATaGGAAAGTGCATATAACCTTGCCTCCCCCTCCCACCACCCCACT +
Preference number: 1 (lower is better)
Translates to: EEATSLCSYSLLCKS*ESAYNLASPSHHPT
Trigger: AGTGGGGTGGTGGGAGGGGGAGGCAAGGTTATATGCACTTTCTCATGATTTACAGAGAAGTGAATAACTGCAAAGTGAAGTTGCTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CCA 90 bp CCTCACTGCAGCTTAGCTTCTGGCTTTATCTTTAGGATGCTACACTaGGTGGGAAAAACTGACGCATGGATAAAAATCATATATCAGGAG +
Preference number: 1 (lower is better)
Translates to: PHCSLASGFIFRMLH*VGKTDAWIKIIYQE
Trigger: CTCCTGATATATGATTTTTATCCATGCGTCAGTTTTTCCCACCCAGTGTAGCATCCTAAAGATAAAGCCAGAAGCTAAGCTGCAGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR TCA 90 bp ACCATGACTTTAGCGAGCTCCACACAGTCCAGAGCAGTGACAGTATaGCTGTGTCTATTTGCTTTATGTTCTAAACCAAATGGAAAGCTA +
Preference number: 1 (lower is better)
Translates to: TMTLASSTQSRAVTV*LCLFALCSKPNGKL
Trigger: TAGCTTTCCATTTGGTTTAGAACATAAAGCAAATAGACACAGTCATACTGTCACTGCTCTGGACTGTGTGGAGCTCGCTAAAGTCATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CCA 90 bp GGCTTTATCTTTAGGATGCTACACTGGGTGGGAAAAACTGACGCATaGATAAAAATCATATATCAGGAGTGCCTCTGCTGTATCTATTCA +
Preference number: 1 (lower is better)
Translates to: GFIFRMLHWVGKTDA*IKIIYQECLCCIYS
Trigger: TGAATAGATACAGCAGAGGCACTCCTGATATATGATTTTTATCCATGCGTCAGTTTTTCCCACCCAGTGTAGCATCCTAAAGATAAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR GCA 90 bp TGGCATTTTGGAACTTTGTCCCATGTGAGACATTGTGCTTTAAACTaGCCCTTTCTAAAAATGACCCTAAACTCAAACAGATCTCAGTGT +
Preference number: 1 (lower is better)
Translates to: WHFGTLSHVRHCALN*PFLKMTLNSNRSQC
Trigger: ACACTGAGATCTGTTTGAGTTTAGGGTCATTTTTAGAAAGGGGCAGTTTAAAGCACAATGTCTCACATGGGACAAAGTTCCAAAATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR GCA 90 bp TGGTTTAATGCTGTTCATACGTTTGTCAATTTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTCTTCCAATCTTCTTCTACTGTCAAT +
Preference number: 1 (lower is better)
Translates to: WFNAVHTFVNFSILS*LLLQVFFQSSSTVN
Trigger: ATTGACAGTAGAAGAAGATTGGAAGAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAAATTGACAAACGTATGAACAGCATTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR GCA 90 bp GGAAAAACTGACGCATGGATAAAAATCATATATCAGGAGTGCCTCTaGTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGA +
Preference number: 1 (lower is better)
Translates to: GKTDAWIKIIYQECL*CIYSYSAVQTILLG
Trigger: TCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCAGAGGCACTCCTGATATATGATTTTTATCCATGCGTCAGTTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CCA 90 bp ATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTTTaGCTGAAAGGTGTACTGGAAACACAGTCCATGCACATATACATA +
Preference number: 1 (lower is better)
Translates to: MYFMYLNSTTTVDLF*LKGVLETQSMHIYI
Trigger: TATGTATATGTGCATGGACTGTGTTTCCAGTACACCTTTCAGCCAAAACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR GCA 90 bp TTAATGCTGTTCATACGTTTGTCAATTTCTCGATACTCAGCTGCCTaGTTCTTCAAGTCTTCTTCCAATCTTCTTCTACTGTCAATAATT +
Preference number: 1 (lower is better)
Translates to: LMLFIRLSISRYSAA*FFKSSSNLLLLSII
Trigger: AATTATTGACAGTAGAAGAAGATTGGAAGAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAAATTGACAAACGTATGAACAGCATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR GCA 90 bp ATACATTTATCAAAGGCCATGAAGTTATCAGATGTTGCAAACACATaGTTTTTGCCTTTTCACATGGTTATGATCTCTCGTGTGTGTAAT +
Preference number: 1 (lower is better)
Translates to: IHLSKAMKLSDVANT*FLPFHMVMISRVCN
Trigger: ATTACACACACGAGAGATCATAACCATGTGAAAAGGCAAAAAGCATGTGTTTGCAACATCTGATAACTTCATGGCCTTTGATAAATGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCCAGAGGCCTCAGGGTaGCTGAACTTCAGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPPEASG*LNFRRR
Trigger: CCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR TCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTAGGCCTCAGGGTGGCTaGACTTCAGGAGAAGGATCA +
Preference number: 2 (lower is better)
Translates to: RLDQTFSGQGSSASLSSARPQGG*TSGEGS
Trigger: TGATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR TCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAGGCCTCAGGGTGGCTaGACTTCAGGAGAAGGATCA +
Preference number: 2 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLRPQGG*TSGEGS
Trigger: TGATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAWRGAL*FPEASG
Trigger: CCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCA...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTCATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 2 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTAGGCCTCTTTGTCCCTaGACGCAGAGATTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: RLDQTFSGQGSSASLSSARPLCP*TQRFLH
Trigger: ATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCACCAGAGGCCTCAGGGTaGCTGAACTTCAGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAPEASG*LNFRRR
Trigger: CCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGG...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR TCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAAGGCCTCAGGGTGGCTaGACTTCAGGAGAAGGATCA +
Preference number: 2 (lower is better)
Translates to: LSSALQSPNFQLVKLQKARPQGG*TSGEGS
Trigger: TGATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCT...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR TCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCCCAAAGCGTCCCTTGTaGGTGGACGTGCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASPKRPL*VDVPFC
Trigger: GCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGG...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 2 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAGGCCTCTTTGTCCCTaGACGCAGAGATTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPRPLCP*TQRFLH
Trigger: ATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR TCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCAGGCCTCAGGGTGGCTaGACTTCAGGAGAAGGATCA +
Preference number: 2 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASRPQGG*TSGEGS
Trigger: TGATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCT...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACATGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SALQSPNFQLVKLQKALTWRGAL*FPEASG
Trigger: CCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCA...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAWRGAL*FPEASG
Trigger: CCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAGATGGCTTCGTTTCTaGAGCTCAATTCACAGATCA +
Preference number: 2 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLRWLRF*SSIHRS
Trigger: TGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACCAGAGGCCTCAGGGTaGCTGAACTTCAGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAPEASG*LNFRRR
Trigger: CCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCACATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 2 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAAGGCCTCTTTGTCCCTaGACGCAGAGATTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LSSALQSPNFQLVKLQKARPLCP*TQRFLH
Trigger: ATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCT...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTTGTCTGGGTCCACCGTaGACAGCAACATCCAGGCTA +
Preference number: 2 (lower is better)
Translates to: VLNKGERCSRNPKTNLALCLGPP*TATSRL
Trigger: TAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACA...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTACAGTGCGATGTGTCTaGGTCCACCGTGCACAGCAA +
Preference number: 2 (lower is better)
Translates to: VLNKGERCSRNPKTNLALTVRCV*VHRAQQ
Trigger: TTGCTGTGCACGGTGGACCCAGACACATCGCACTGT...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTAGGATGCTACACTGGGTaGGAAAAACTGACGCATGGA +
Preference number: 2 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLGCYTG*EKLTHG
Trigger: TCCATGCGTCAGTTTTTCCCACCCAGTGTAGCATCC...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTACATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 2 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAAGGCCTCTTTGTCCCTaGACGCAGAGATTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTARPLCP*TQRFLH
Trigger: ATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CCA 90 bp CACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCTCGTCTTTCTCAGCTGGATTGCTGTACCGCTCTTaGGTCTGGCACTGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: HLFESTTSSIGLSSFSAGLLYRS*VWHCSS
Trigger: TGAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAA...TCCAGCTGAGAAAGACGAGAGACCAATACTTGATGTGGTTGACTCAAAAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR CAA 90 bp GCGTCCCTTGTGAGTGGACGTGCCTTTCTGCTACATATCGTTCATTaGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCA +
Preference number: 2 (lower is better)
Translates to: ASLVSGRAFLLHIVH*LQNEIIHSAMCLGP
Trigger: TGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAAATGAACGATATGTAGCAGAAAGGCACGTCCACTCACAAGGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATCCAGAGGCCTCAGGGTaGCTGAACTTCAGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDPEASG*LNFRRR
Trigger: CCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGG...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACAGCTTAGGAACGTGTaGTCATCATACAGCCTTAGG +
Preference number: 2 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTQLRNV*SSYSLR
Trigger: CCTAAGGCTGTATGATGACCACACGTTCCTAAGCTG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR CAA 90 bp AGTGAAGCACATACAATGATTAGAATGAATGAGAAGGACTGCCACTaGGATTCCTGCAATGACCATGACTTTAGCGAGCTCCACACAGTC +
Preference number: 2 (lower is better)
Translates to: SEAHTMIRMNEKDCH*DSCNDHDFSELHTV
Trigger: GACTGTGTGGAGCTCGCTAAAGTCATGGTCATTGCAGGAATCCAAGTGGCAGTCCTTCTCATTCATTCTAATCATTGTATGTGCTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAGATGGCTTCGTTTCTaGAGCTCAATTCACAGATCA +
Preference number: 2 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTRWLRF*SSIHRS
Trigger: TGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR GCA 90 bp CACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCTCGTCTTTCTCAGCTGGACAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTC +
Preference number: 2 (lower is better)
Translates to: HLFESTTSSIGLSSFSAGQKGPV*CISKFF
Trigger: GAAAAACTTCGAGATACAGCAGACGGGACCTTTTTG...TCCAGCTGAGAAAGACGAGAGACCAATACTTGATGTGGTTGACTCAAAAAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR-3UTR GCA 90 bp ATCAAGTATTGGTCTCTCGTCTTTCTCAGCTGGATAAGGTCTGGTTTAATGCTGTTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: IKYWSLVFLSWIRSGLMLFSILS*LLLQVF
Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAA...CAGCATTAAACCAGACCTTATCCAGCTGAGAAAGACGAGAGACCAATACTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR-3UTR CCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATAGCGTCCCTTGTGAGTaGACGTGCCTTTCTGCTACA +
Preference number: 2 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDSVPCE*TCLSAT
Trigger: TGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCT...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 90 bp GTCTTTCTCAGCTGGATAAGGTCTGGTTTAATGCTGTTCATACGTTaGTCAATTTCTCGATACTCAGCTGCCTGCTTCTTCAAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: VFLSWIRSGLMLFIR*SISRYSAACFFKSS
Trigger: AGAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAAATTGACAAACGTATGAACAGCATTAAACCAGACCTTATCCAGCTGAGAAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR-3UTR CCA 90 bp CGTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTTACCGCTCTTGGGTCTaGCACTGTTCTTCAAATATT +
Preference number: 2 (lower is better)
Translates to: RSTSFAEHLFESTTSSIGYRSWV*HCSSNI
Trigger: AATATTTGAAGAACAGTGCCAGACCCAAGAGCGGTA...ACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR-3UTR CCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATAGAAGGACTGCCACTTaGATTCCTGCAATGACCATG +
Preference number: 2 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDRRTAT*IPAMTM
Trigger: CATGGTCATTGCAGGAATCCAAGTGGCAGTCCTTCT...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTCCTTGTGAGTGGACGTaGCTTTCTGCTACATATCGT +
Preference number: 2 (lower is better)
Translates to: FACYVLYVLELNNYCGSVPCEWT*LSATYR
Trigger: ACGATATGTAGCAGAAAGGCACGTCCACTCACAAGG...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp CGTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTGGATTTCCTGGGATGTaGGGGTATATTCTTCATATA +
Preference number: 2 (lower is better)
Translates to: RSTSFAEHLFESTTSSIGGFPGM*GYILHI
Trigger: TATATGAAGAATATACCCGCACATCCCAGGAAATCC...ACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR-3UTR CCA 90 bp TCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCTTCATTTGGATTTCCTaGGATGTGCGGGTATATTCT +
Preference number: 2 (lower is better)
Translates to: STSFAEHLFESTTSSIGLFIWIS*DVRVYS
Trigger: AGAATATACCCGCACATCCCAGGAAATCCAAATGAA...GAGACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR CAA 90 bp TTATCAAAGGCCATGAAGTTATCAGATGTTGCAAACACATGCTTTTaGCCTTTTCACATGGTTATGATCTCTCGTGTGTGTAATGTGAGG +
Preference number: 2 (lower is better)
Translates to: LSKAMKLSDVANTCF*PFHMVMISRVCNVR
Trigger: CCTCACATTACACACACGAGAGATCATAACCATGTGAAAAGGCAAAAAGCATGTGTTTGCAACATCTGATAACTTCATGGCCTTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTTTTAGGATGCTACACTaGGTGGGAAAAACTGACGCA +
Preference number: 2 (lower is better)
Translates to: FACYVLYVLELNNYCGSVFRMLH*VGKTDA
Trigger: TGCGTCAGTTTTTCCCACCCAGTGTAGCATCCTAAA...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 90 bp TATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTTaGGCTGAAAGGTGTACTGGAAACACAGTCCATGCACATATACAT +
Preference number: 2 (lower is better)
Translates to: YVLYVLELNNYCGSV*AERCTGNTVHAHIH
Trigger: ATGTATATGTGCATGGACTGTGTTTCCAGTACACCTTTCAGCCAAAACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 90 bp AGTAAGAATTGTACTAGACGTTCGCTTGTTATGTACTTTATGTACTaGAACTCAACAACTACTGTGGATCTGTTTTGGCTGAAAGGTGTA +
Preference number: 2 (lower is better)
Translates to: SKNCTRRSLVMYFMY*NSTTTVDLFWLKGV
Trigger: TACACCTTTCAGCCAAAACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAACGTCTAGTACAATTCTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR TCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTACTCAGCTGCAAGACTaGTTCTTTCAAAAGGAACAA +
Preference number: 2 (lower is better)
Translates to: FACYVLYVLELNNYCGSVTQLQD*FFQKEQ
Trigger: TTGTTCCTTTTGAAAGAATCAGTCTTGCAGCTGAGT...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTGATTTTTCACTCAGCTaGAAGACTGATTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: FACYVLYVLELNNYCGSVDFSLS*KTDSFK
Trigger: TTTGAAAGAATCAGTCTTGCAGCTGAGTGAAAAATC...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CAA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACTGGAGAGGAGCCCTTaGCTTTCCAGAGGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPLERSP*LSRGLR
Trigger: CCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR CCA 72 bp TCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTaGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: STVHSNIQAKPG*TKPSQARVLLP
Trigger: AGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR GCA 72 bp GAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTaGACAGCAACATCCAGGCTAAACCAGGCTGGACCA +
Preference number: 3 (lower is better)
Translates to: EIIHSAMCLGPP*TATSRLNQAGP
Trigger: TGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACTGGAGAGGAGCCCTTaGCTTTCCAGAGGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTALERSP*LSRGLR
Trigger: CCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACACTGGAGAGGAGCCCTTaGCTTTCCAGAGGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: SALQSPNFQLVKLQKALTLERSP*LSRGLR
Trigger: CCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAG...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATGGTTAAAGGCCTCTTaGTCCCTGCACGCAGAGATT +
Preference number: 3 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAWLKAS*SLHAEI
Trigger: AATCTCTGCGTGCAGGGACAAAGAGGCCTTTAACCA...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR GCA 72 bp GTTATGATCTCTCGTGTGTGTAATGTGAGGTCCCAATaGTCCCACTTCTACGCCCAATCACAGCCTCACTGC +
Preference number: 3 (lower is better)
Translates to: VMISRVCNVRSQ*SHFYAQSQPHC
Trigger: GCAGTGAGGCTGTGATTGGGCGTAGAAGTGGGAGCATTGGGACCTCACATTACACACACGAGAGATCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CAA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCCATTTCTTTTTCTCTTaGTGTTGTATGTGGTTGTGG +
Preference number: 3 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGHFFFS*CCMWLW
Trigger: CCACAACCACATACAACACAAAGAGAAAAAGAAATG...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACATTTCTTTTTCTCTTaGTGTTGTATGTGGTTGTGG +
Preference number: 3 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPHFFFS*CCMWLW
Trigger: CCACAACCACATACAACACAAAGAGAAAAAGAAATG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTAAAGTGCATATAACCTaGCCTCCCCCTCCCACCACC +
Preference number: 3 (lower is better)
Translates to: VLNKGERCSRNPKTNLALKVHIT*PPPPTT
Trigger: GGTGGTGGGAGGGGGAGGCAAGGTTATATGCACTTT...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CCA 72 bp GGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTaGGCAAGCTACACTGTAATCAAAAAGGCATTGGGC +
Preference number: 3 (lower is better)
Translates to: GRLAKYLKRQMR*ASYTVIKKALG
Trigger: GCCCAATGCCTTTTTGATTACAGTGTAGCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CAA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACATGGTTAAAGGCCTCTTaGTCCCTGCACGCAGAGATT +
Preference number: 3 (lower is better)
Translates to: SALQSPNFQLVKLQKALTWLKAS*SLHAEI
Trigger: AATCTCTGCGTGCAGGGACAAAGAGGCCTTTAACCA...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATGGTTAAAGGCCTCTTaGTCCCTGCACGCAGAGATT +
Preference number: 3 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAWLKAS*SLHAEI
Trigger: AATCTCTGCGTGCAGGGACAAAGAGGCCTTTAACCA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTCTCCCACCACCCCACTaGATACATCCCTTCACTACA +
Preference number: 3 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFLPPPH*IHPFTT
Trigger: TGTAGTGAAGGGATGTATCAAGTGGGGTGGTGGGAG...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CAA 90 bp TCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCTTTGCTGTACCGCTCTaGGGTCTGGCACTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: STSFAEHLFESTTSSIGLFAVPL*GLALFF
Trigger: GAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAAA...GAGACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR CCA 72 bp CATGAACTGACATTCTCCCAAAGCGTCCCTTGTGAGTaGACGTGCCTTTCTGCTACATATCGTTCATTTGTT +
Preference number: 3 (lower is better)
Translates to: HELTFSQSVPCE*TCLSATYRSFV
Trigger: AACAAATGAACGATATGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGGGAGAATGTCAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp ACTTTAAAGCAGAGACGCAGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGATTGAATAAAGCAGCTTaGAAGCTTATCAGGCACTGC +
Preference number: 3 (lower is better)
Translates to: TLKQRRRLKPGKSSVVWRLNKAA*KLIRHC
Trigger: GCAGTGCCTGATAAGCTTCAAAGCTGCTTTATTCAA...TCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCTGCGTCTCTGCTTTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR TCA 72 bp AGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGATaGGAGGGAAATGGTCAGATCAGTAGAGTCAAGTTT +
Preference number: 3 (lower is better)
Translates to: RLKPGKSSVVWR*EGNGQISRVKF
Trigger: AAACTTGACTCTACTGATCTGACCATTTCCCTCTCATCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR GCA 72 bp CTGACATTCTCCCAAAGCGTCCCTTGTGAGTGGACGTaGCTTTCTGCTACATATCGTTCATTTGTTACAAAA +
Preference number: 3 (lower is better)
Translates to: LTFSQSVPCEWT*LSATYRSFVTK
Trigger: TTTTGTAACAAATGAACGATATGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGGGAGAATGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR-3UTR CAA 90 bp GTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCAGCTGTCCTTTTCATTaGGATTTCCTGGGATGTGCG +
Preference number: 3 (lower is better)
Translates to: VQLLLPNTFLSQPHQVLVSCPFH*DFLGCA
Trigger: CGCACATCCCAGGAAATCCAAATGAAAAGGACAGCT...GACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR TCA 72 bp CTTAAAACAAGACATAGCTCCATTGAATCTATAACTTaGACGAAATGTCAAGGAGGCACACTACCCCCACCC +
Preference number: 3 (lower is better)
Translates to: LKTRHSSIESIT*TKCQGGTLPPP
Trigger: GGGTGGGGGTAGTGTGCCTCCTTGACATTTCGTTCAAGTTATAGATTCAATGGAGCTATGTCTTGTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CCA 72 bp ATGTACTTGAACTCAACAACTACTGTGGATCTGTTTTaGCTGAAAGGTGTACTGGAAACACAGTCCATGCAC +
Preference number: 3 (lower is better)
Translates to: MYLNSTTTVDLF*LKGVLETQSMH
Trigger: GTGCATGGACTGTGTTTCCAGTACACCTTTCAGCCAAAACAGATCCACAGTAGTTGTTGAGTTCAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CAA 90 bp CAGTGTTTTCATTGCCCAACCACTCGTTCAACTTCTTTTGCCGAACACCTTTTTTTTTCTATGTATTCTTaGCTGTACCGCTCTTGGGTC +
Preference number: 3 (lower is better)
Translates to: QCFHCPTTRSTSFAEHLFFSMYS*LYRSWV
Trigger: GACCCAAGAGCGGTACAGCAAAGAATACATAGAAAA...AAAAAGGTGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTG
42% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR TCA 72 bp TTAGCGAGCTCCACACAGTCCAGAGCAGTGACAGTATaGCTGTGTCTATTTGCTTTATGTTCTAAACCAAAT +
Preference number: 3 (lower is better)
Translates to: LASSTQSRAVTV*LCLFALCSKPN
Trigger: ATTTGGTTTAGAACATAAAGCAAATAGACACAGTCATACTGTCACTGCTCTGGACTGTGTGGAGCTCGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR GCA 72 bp GCTGTTCATACGTTTGTCAATTTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTCTTCCAATCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: AVHTFVNFSILS*LLLQVFFQSSS
Trigger: AGAAGAAGATTGGAAGAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAAATTGACAAACGTATGAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR-3UTR CAA 90 bp CTCGTCTTTCTCAGCTGGATAAGGTCTGGTTTAATGCTGTTCATACGTTTGTCAGACAACTTGATCCTGTaGGTATTTGGATACTGGATA +
Preference number: 3 (lower is better)
Translates to: LVFLSWIRSGLMLFIRLSDNLIL*VFGYWI
Trigger: TATCCAGTATCCAAATACCAACAGGATCAAGTTGTC...TGACAAACGTATGAACAGCATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR-3UTR CAA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTAAATACCGTATCATCTaGCAAAGAATGTTGAAGCAC +
Preference number: 3 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFKYRII*QRMLKH
Trigger: GTGCTTCAACATTCTTTGCAAGATGATACGGTATTT...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CCA 72 bp AGCTTAGCTTCTGGCTTTATCTTTAGGATGCTACACTaGGTGGGAAAAACTGACGCATGGATAAAAATCATA +
Preference number: 3 (lower is better)
Translates to: SLASGFIFRMLH*VGKTDAWIKII
Trigger: TATGATTTTTATCCATGCGTCAGTTTTTCCCACCCAGTGTAGCATCCTAAAGATAAAGCCAGAAGCTAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR-3UTR CAA 90 bp AATGCTGTTCATACGTTTGTCAATTTCTCGATACTCAGCTGCCTGCTTCTTCAAATCTTCTTTGACAACTaGATCCTGTTGGTATTTGGA +
Preference number: 3 (lower is better)
Translates to: NAVHTFVNFSILSCLLLQIFFDN*ILLVFG
Trigger: TCCAAATACCAACAGGATCAAGTTGTCAAAGAAGAT...TTGAAGAAGCAGGCAGCTGAGTATCGAGAAATTGACAAACGTATGAACAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
3UTR GCA 72 bp GACGCATGGATAAAAATCATATATCAGGAGTGCCTCTaGTGTATCTATTCATATTCAGCCGTTCAGACAATA +
Preference number: 3 (lower is better)
Translates to: DAWIKIIYQECL*CIYSYSAVQTI
Trigger: TATTGTCTGAACGGCTGAATATGAATAGATACAGCAGAGGCACTCCTGATATATGATTTTTATCCATGCGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCCTCCGACAGCTAGCCTaGCGCCCTCGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGLRQLA*RPRRCR
Trigger: GCGGCAGCGGCGAGGGCGGCAGGCTAGCTGTCGGAG...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACTCCGACAGCTAGCCTaGCGCCCTCGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPLRQLA*RPRRCR
Trigger: GCGGCAGCGGCGAGGGCGGCAGGCTAGCTGTCGGAG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTCCGGGCGTGCACAGTaGCCCAGCTCCGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPSGRAQ*PSSAWL
Trigger: GAGCCAAGCGGAGCTGGGCCACTGTGCACGCCCGGA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCGTTCCCGGCAGGCAGTaGTCGTGTCCGGCGCCGAGA +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLVPGRQ*SCPAPR
Trigger: TCTCGGCGCCGGACACGAGCACTGCCTGCCGGGAAC...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCGCCGTGCCCGATCCGTaGTTGCCGTCTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGAVPDP*LPSPTA
Trigger: AGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGC...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCGCCGTGCCCGATCCGTaGTTGCCGTCTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIAVPDP*LPSPTA
Trigger: AGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGC...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTGTTCTTCCACCAAGTaGGCCAAGCCCCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPCSSTK*AKPPHL
Trigger: GAGGTGCGGGGGCTTGGCCCACTTGGTGGAAGAACA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCCAAAGCGTCCCTTGTaGGTGGACGTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPPKRPL*VDVPFC
Trigger: GCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPWRGAL*FPEASG
Trigger: CCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAGCCACCGCCGCTCACTaGCGGCTCCTCATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPATAAH*RLLIEK
Trigger: CTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGC...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR CCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTCCCGCGCTGCAGCGGTaGCCTCCTGCCCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSPALQR*PPARSV
Trigger: AACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGG...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTGCCGGCTCCTCATTaGGAAGCCAACTGGATTTCG +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLPAPH*EANWIS
Trigger: CGAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCCCGGACAAGAAAAGTaGCATCTCGCTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPPGQEK*HLASLA
Trigger: TGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCAGGCCAGGGTTCTTCTaGCTCTCTCTCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGRPGFF*LSLLRS
Trigger: AGAGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCT...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTTCCACTTCCTCTGCGTaGCACAGTCCTCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSASTSSA*HSPLTG
Trigger: GCCAGTGAGAGGACTGTGGCACGCAGAGGAAGTGGA...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCACCTCGCCGCTGCCGCTaGTTCCTCCAACTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAPRRCR*FLQLRS
Trigger: GGAGCGGAGTTGGAGGAAGCAGCGGCAGCGGCGAGG...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCCCAGAGGCCTCAGGGTaGCTGAACTTCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGPEASG*LNFRRR
Trigger: CCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGG...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTCCAGAGGCCTCAGGGTaGCTGAACTTCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAPEASG*LNFRRR
Trigger: CCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGG...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCAGGCTAAACCAGGCTaGACCAAACCTTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPQAKPG*TKPSQA
Trigger: GGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACCAAAGCGTCCCTTGTaGGTGGACGTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPPKRPL*VDVPFC
Trigger: GCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCCTCCATCAATGGTGTaGCCGAAGACAGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLPPSMV*PKTGLH
Trigger: GTGGAGCCCTGTCTTCGGTCACACCATTGATGGAGG...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTCCCGGACAAGAAAAGTaGCATCTCGCTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAPGQEK*HLASLA
Trigger: TGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGG...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTAGGGAGTCGTTGTGCTaGACAAGGGAGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSARESLC*TREVCW
Trigger: CCAACACACCTCCCTTGTGCAGCACAACGACTCCCT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTTGAGGGAGTCGTTGTaGTGCACAAGGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLRESL*CTREVC
Trigger: ACACACCTCCCTTGTGCAGCACAACGACTCCCTCAA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPWRGAL*FPEASG
Trigger: CCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTGTCTGGGTCCACCGTaGACAGCAACATCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGCLGPP*TATSRL
Trigger: TAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGGCGACCCGCCGGCCGTaGCCGATCCGTGCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEATRRP*PIRACR
Trigger: ACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGC...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTACAGTGCGATGTGTCTaGGTCCACCGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSATVRCV*VHRAQQ
Trigger: TTGCTGTGCACGGTGGACCCAGACACATCGCACTGT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTACCCGCGCTGCAGCGGTaGCCTCCTGCCCGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLPALQR*PPARSV
Trigger: AACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGG...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCACTTTGAATCCAGGCTaGCTCTCACAGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRITLNPG*LSQRGP
Trigger: TGGGCCTCGCTGTGAGAGTCAGCCTGGATTCAAAGT...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAGGGAGTCGTTGTGCTaGACAAGGGAGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPRESLC*TREVCW
Trigger: CCAACACACCTCCCTTGTGCAGCACAACGACTCCCT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTTGAGGGAGTCGTTGTaGTGCACAAGGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGLRESL*CTREVC
Trigger: ACACACCTCCCTTGTGCAGCACAACGACTCCCTCAA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATGTCTGGGTCCACCGTaGACAGCAACATCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPCLGPP*TATSRL
Trigger: TAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCGACCCGCCGGCCGTaGCCGATCCGTGCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTATRRP*PIRACR
Trigger: ACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGC...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAGGAGGCAGTGCTGGTaGAGGCTGTCGTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLRRQCW*RLSFIP
Trigger: TGGAATGAACGACAGCCTGCACCAGCACTGCCTCCT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTGGTTTAGGAGGCAGTaGTGGTGCAGGCTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIWFRRQ*WCRLSF
Trigger: GAACGACAGCCTGCACCAGCACTGCCTCCTAAACCA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTTGCTGTACCGCTCTTaGGTCTGGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLLYRS*VWHCSS
Trigger: TGAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACAGGCTAAACCAGGCTaGACCAAACCTTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPQAKPG*TKPSQA
Trigger: GGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCACAGTGCGATGTGTCTaGGTCCACCGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRITVRCV*VHRAQQ
Trigger: TTGCTGTGCACGGTGGACCCAGACACATCGCACTGT...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGAGTTTTCGAAGAACCTaGTGCAACAGGAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPSFRRT*CNRKRP
Trigger: CGGCCTCTTCCTGTTGCACCAGGTTCTTCGAAAACT...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTTCCTGTCCATCACTaGATCCAAGAGCTACTAAGG +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLPVHH*IQELLR
Trigger: CCTTAGTAGCTCTTGGATTCAGTGATGGACAGGAAG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCACAGTCCAGAGCAGTaGCAGTATGACTGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPHSPEQ*QYDCVY
Trigger: ATAGACACAGTCATACTGTCACTGCTCTGGACTGTG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTAGCAGCCCTGTTTACTaGTCTCCCGGACAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSASSPVY*SPGQEK
Trigger: CTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTTGAGGGAGTCGTTGTaGTGCACAAGGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLLRESL*CTREVC
Trigger: ACACACCTCCCTTGTGCAGCACAACGACTCCCTCAA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTTGAGGGAGTCGTTGTaGTGCACAAGGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRILRESL*CTREVC
Trigger: ACACACCTCCCTTGTGCAGCACAACGACTCCCTCAA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCTGCCCGATCCGTGCTTaGCGTCTCCGACAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASCPIRA*RLRQLA
Trigger: GGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCA...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTGCCCGATCCGTGCTTaGCGTCTCCGACAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSCPIRA*RLRQLA
Trigger: GGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAGCGTCCCTTGTGAGTaGACGTGCCTTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLSVPCE*TCLSAT
Trigger: TGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACGTCTGATTGTACCGTaGCACTCCACACACGAGCTT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPRLIVP*HSTHEL
Trigger: AAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCAAGAGGAGAGGTGACTaGCCATACGGCTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIKRRGD*PYGCPS
Trigger: AGATGGACAGCCGTATGGCCAGTCACCTCTCCTCTT...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTCAACGGTTTCCCTTTaGAATGCCTGTATCCGACAA +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPSTVSL*NACIRQ
Trigger: TTGTCGGATACAGGCATTTCAAAGGGAAACCGTTGA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCAGCTTTGTTTCGGTTaGTGCTTCCAACATTCCATG +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPQLCFG*CFQHSM
Trigger: CATGGAATGTTGGAAGCAGCAACCGAAACAAAGCTG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAGCAGCCCTGTTTACTaGTCTCCCGGACAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLSSPVY*SPGQEK
Trigger: CTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCCCTTGTGAGTGGACGTaGCTTTCTGCTACATATCGT +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGPCEWT*LSATYR
Trigger: ACGATATGTAGCAGAAAGGCACGTCCACTCACAAGG...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTGCGTCAGCCAAAACGTaGACATCGATCATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAASAKT*TSIISK
Trigger: CTTGGAAATGATCGATGTGCACGTTTTGGCTGACGC...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAATGTGAGGTCCCAATaGTCCCACTTCTACGCCCAA +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPNVRSQ*SHFYAQ
Trigger: TTGGGCGTAGAAGTGGGAGCATTGGGACCTCACATT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCCAGCTTAGGAACGTGTaGTCATCATACAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGQLRNV*SSYSLR
Trigger: CCTAAGGCTGTATGATGACCACACGTTCCTAAGCTG...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTAGTGCCACTTCACTCTaGCACTTCACTGACATCTCT +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSASATSL*HFTDIS
Trigger: AGAGATGTCAGTGAAGTGCCAGAGTGAAGTGGCACT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523872.1
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTGCCGAACACCTTTTTaGGTCAACCACATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPCRTPF*VNHIKY
Trigger: ATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTCCAAAGCGTCCCTTGTaGGTGGACGTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFPKRPL*VDVPFC
Trigger: GCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGG...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTAACTTGTCAACACTTTaGATCCAGGCTGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSANLSTL*IQADSH
Trigger: GTGAGAGTCAGCCTGGATTCAAAGTGTTGACAAGTT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAAACGGCTGCTGGAATaGCAGGATTTGGTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPKRLLE*QDLVSP
Trigger: TGGACTTACCAAATCCTGTCATTCCAGCAGCCGTTT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATGGTTTAGGAGGCAGTaGTGGTGGGTCCATTTCTAT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPWFRRQ*WWVHFY
Trigger: ATAGAAATGGACCCACCAGCACTGCCTCCTAAACCA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336483.9
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPQKGPV*CISKFF
Trigger: GAAAAACTTCGAGATACAGCAGACGGGACCTTTTTG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGFSILS*LLLQVF
Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTTTGTTTCGGTTGCTaGTTCCAACATTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLCFGC*FQHSMS
Trigger: AGACATGGAATGTTGGAAGCAGCAACCGAAACAAAG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTTGTTTATGACACAATaGTTTACTTCGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLFMTQ*FTSPST
Trigger: GGTGGACGGCGAAGTAAAGCATTGTGTCATAAACAA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTAGGCCAGGGTTCTTCTaGCTCTCTCTCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFRPGFF*LSLLRS
Trigger: AGAGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCCCTTGTGAGTGGACGTaGCTTTCTGCTACATATCGT +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIPCEWT*LSATYR
Trigger: ACGATATGTAGCAGAAAGGCACGTCCACTCACAAGG...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCGCGTCAGCCAAAACGTaGACATCGATCATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIASAKT*TSIISK
Trigger: CTTGGAAATGATCGATGTGCACGTTTTGGCTGACGC...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTCCAGAGGCCTCAGGGTaGCTGAACTTCAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFPEASG*LNFRRR
Trigger: CCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGG...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCAGCTTAGGAACGTGTaGTCATCATACAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLQLRNV*SSYSLR
Trigger: CCTAAGGCTGTATGATGACCACACGTTCCTAAGCTG...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACCACAGTCCTCTCACTaGCTTCCTTTTCAGCAACTT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPPQSSH*LPFQQL
Trigger: AAGTTGCTGAAAAGGAAGCCAGTGAGAGGACTGTGG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCATTCAACCACAGAACTaGAGGTTAATGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGIQPQN*RLMGQR
Trigger: TCTCTGACCCATTAACCTTCAGTTCTGTGGTTGAAT...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTATTCAACCACAGAACTaGAGGTTAATGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAIQPQN*RLMGQR
Trigger: TCTCTGACCCATTAACCTTCAGTTCTGTGGTTGAAT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTACTTTGAATCCAGGCTaGCTCTCACAGCGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFTLNPG*LSQRGP
Trigger: TGGGCCTCGCTGTGAGAGTCAGCCTGGATTCAAAGT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAACTTGTCAACACTTTaGATCCAGGCTGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPNLSTL*IQADSH
Trigger: GTGAGAGTCAGCCTGGATTCAAAGTGTTGACAAGTT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGATGTACAGTTCCTACTaGACATACCAGCTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPMYSSY*TYQLLH
Trigger: ATGCAAAAGCTGGTATGTTCAGTAGGAACTGTACAT...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGGGATTTCCTGGGATGTaGGGGTATATTCTTCATATA +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPGFPGM*GYILHI
Trigger: TATATGAAGAATATACCCGCACATCCCAGGAAATCC...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTTTCTATGTATTCTTTaGTGTACCGCTCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPFLCIL*CTALGS
Trigger: AGACCCAAGAGCGGTACAGCAAAGAATACATAGAAA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCCTTTGTTTCGGTTGCTaGTTCCAACATTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGLCFGC*FQHSMS
Trigger: AGACATGGAATGTTGGAAGCAGCAACCGAAACAAAG...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTAGGGAGTCGTTGTGCTaGACAAGGGAGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFRESLC*TREVCW
Trigger: CCAACACACCTCCCTTGTGCAGCACAACGACTCCCT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCAGATGGCTTCGTTTCTaGAGCTCAATTCACAGATCA +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGRWLRF*SSIHRS
Trigger: TGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCT...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTGTCTGGGTCCACCGTaGACAGCAACATCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSCLGPP*TATSRL
Trigger: TAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTCATGTTTGCAAATCTaGTACCATGCAACAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPSCLQI*YHATVE
Trigger: CTCAACTGTTGCATGGTAGCAGATTTGCAAACATGA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATTCACTGTAAACGGCTaGTGGAATGACAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPFTVNG*WNDRIW
Trigger: CCAAATCCTGTCATTCCAGCAGCCGTTTACAGTGAA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTAACCACATCAAGTATTaGTCTCTCGTCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSANHIKY*SLVFLS
Trigger: GCTGAGAAAGACGAGAGACCAATACTTGATGTGGTT...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTCAGGCTAAACCAGGCTaGACCAAACCTTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSQAKPG*TKPSQA
Trigger: GGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTG...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAAGCGTCCCTTGTGAGTaGACGTGCCTTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKASVPCE*TCLSAT
Trigger: TGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCT...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTTCAAGCAACAAAAACTaGGGTGGGGAAGCTTATTCT +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSASSNKN*GGEAYS
Trigger: AGAATAAGCTTCCCCACCCCAGTTTTTGTTGCTTGA...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATCTGTCCTCCATCAATaGTGTGACCGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKASVLHQ*CDRRQG
Trigger: GCCCTGTCTTCGGTCACACCATTGATGGAGGACAGA...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAAACGACAAATGCGGTaGGCAAGCTACACTGTAATC +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPKRQMR*ASYTVI
Trigger: GATTACAGTGTAGCTTGCCCACCGCATTTGTCGTTT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATGCCGAACACCTTTTTaGGTCAACCACATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPCRTPF*VNHIKY
Trigger: ATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTGCCGAACACCTTTTTaGGTCAACCACATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRICRTPF*VNHIKY
Trigger: ATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACCAAAGCGTCCCTTGTaGGTGGACGTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAPKRPL*VDVPFC
Trigger: GCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCAAAGCGTCCCTTGTaGGTGGACGTGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEPKRPL*VDVPFC
Trigger: GCAGAAAGGCACGTCCACTCACAAGGGACGCTTTGG...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGAGCTTCTTCAATAGCTaGATATATTCTTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPSFFNS*IYSSEL
Trigger: AAGCTCCGAAGAATATATTCAGCTATTGAAGAAGCT...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPQKGPV*CISKFF
Trigger: GAAAAACTTCGAGATACAGCAGACGGGACCTTTTTG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTTTTCTATGTATTCTTTaGTGTACCGCTCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAFLCIL*CTALGS
Trigger: AGACCCAAGAGCGGTACAGCAAAGAATACATAGAAA...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTTGTTTATGACACAATaGTTTACTTCGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLLFMTQ*FTSPST
Trigger: GGTGGACGGCGAAGTAAAGCATTGTGTCATAAACAA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEWRGAL*FPEASG
Trigger: CCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCAGATGGCTTCGTTTCTaGAGCTCAATTCACAGATCA +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIRWLRF*SSIHRS
Trigger: TGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCT...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAAGGCCAGGGTTCTTCTaGCTCTCTCTCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTARPGFF*LSLLRS
Trigger: AGAGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCGTGGACGTGCCTTTCTaGTACATATCGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIVDVPF*YISFIC
Trigger: ACAAATGAACGATATGTAGCAGAAAGGCACGTCCAC...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTTAGGAGGCAGTGTTTaGAGGTTATGCATTTCAACG +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRILGGSV*RLCIST
Trigger: CGTTGAAATGCATAACCTGCAAACACTGCCTCCTAA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTTTCGAAGAACCTGGTaGAACAGGAAGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSFRRTW*NRKRPR
Trigger: CCTCGGCCTCTTCCTGTTGCACCAGGTTCTTCGAAA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCAAGCTTATCAGGCACTaGCCAACAAAACAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIKLIRH*PTKQSK
Trigger: TTTGGACTGTTTTGTTGGGCAGTGCCTGATAAGCTT...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATACCGCTCTTGGGTCTaGCACTGTTCTTCAAATATT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPYRSWV*HCSSNI
Trigger: AATATTTGAAGAACAGTGCCAGACCCAAGAGCGGTA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACAGCTGGATAAGGTCTaGTTTAATGCTGTTCATACG +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPQLDKV*FNAVHT
Trigger: CGTATGAACAGCATTAAACCAGACCTTATCCAGCTG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCCTCGTCTTTCTCAGCTaGATAAGGTCTGGTTTAATG +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRILVFLS*IRSGLM
Trigger: CATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAACCACATCAAGTATTaGTCTCTCGTCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLNHIKY*SLVFLS
Trigger: GCTGAGAAAGACGAGAGACCAATACTTGATGTGGTT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTAGCGTCCCTTGTGAGTaGACGTGCCTTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFSVPCE*TCLSAT
Trigger: TGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTAGCGTCCCTTGTGAGTaGACGTGCCTTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSSVPCE*TCLSAT
Trigger: TGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCT...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATCAAGCAACAAAAACTaGGGTGGGGAAGCTTATTCT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPSSNKN*GGEAYS
Trigger: AGAATAAGCTTCCCCACCCCAGTTTTTGTTGCTTGA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCCGTCTGATTGTACCGTaGCACTCCACACACGAGCTT +
Preference number: 4 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASRLIVP*HSTHEL
Trigger: AAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACG...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTAAGAGGAGAGGTGACTaGCCATACGGCTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFKRRGD*PYGCPS
Trigger: AGATGGACAGCCGTATGGCCAGTCACCTCTCCTCTT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTAAGGTGGCCGGGGCTTTaGTGTGGGAGGCGAGATTTT +
Preference number: 4 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLRWPGL*CGRRDF
Trigger: AAAATCTCGCCTCCCACACCAAAGCCCCGGCCACCT...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAAGGTGGCCGGGGCTTTaGTGTGGGAGGCGAGATTTT +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTRWPGL*CGRRDF
Trigger: AAAATCTCGCCTCCCACACCAAAGCCCCGGCCACCT...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAGGATGCTACACTGGGTaGGAAAAACTGACGCATGGA +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAGCYTG*EKLTHG
Trigger: TCCATGCGTCAGTTTTTCCCACCCAGTGTAGCATCC...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCACTGTGGATCTGTTTTaGCTGAAAGGTGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLTVDLF*LKGVLE
Trigger: TTCCAGTACACCTTTCAGCCAAAACAGATCCACAGT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAATTTGGGATTATACTaGGCTAGAGATTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLNLGLY*ARDSFR
Trigger: CCGGAATGAATCTCTAGCTCAGTATAATCCCAAATT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTTGCTGTTTTGTTTATaGCACAATGCTTTACTTCGC +
Preference number: 4 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGLLFCL*HNALLR
Trigger: GCGAAGTAAAGCATTGTGTCATAAACAAAACAGCAA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTCTTCTGAACATACATaGACTGACATTCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLSSEHT*TDILPK
Trigger: CTTTGGGAGAATGTCAGTTCATGTATGTTCAGAAGA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCACTTCCTGTCCATCACTaGATCCAAGAGCTACTAAGG +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKALPVHH*IQELLR
Trigger: CCTTAGTAGCTCTTGGATTCAGTGATGGACAGGAAG...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAACTCAGCTGCAAGACTaGTTCTTTCAAAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPTQLQD*FFQKEQ
Trigger: TTGTTCCTTTTGAAAGAATCAGTCTTGCAGCTGAGT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATTTCTATGTATTCTTTaGTGTACCGCTCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPFLCIL*CTALGS
Trigger: AGACCCAAGAGCGGTACAGCAAAGAATACATAGAAA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACACCCGGACAAGAAAAGTaGCATCTCGCTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTPGQEK*HLASLA
Trigger: TGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGG...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACCCGGACAAGAAAAGTaGCATCTCGCTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAPGQEK*HLASLA
Trigger: TGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATGGAGAGGAGCCCTTTaGTTTCCAGAGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTWRGAL*FPEASG
Trigger: CCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAGGCCAGGGTTCTTCTaGCTCTCTCTCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTRPGFF*LSLLRS
Trigger: AGAGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCACCTTGTGAGTGGACGTaGCTTTCTGCTACATATCGT +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAPCEWT*LSATYR
Trigger: ACGATATGTAGCAGAAAGGCACGTCCACTCACAAGG...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATCAGGAGGGGCAAACTaGTCTGCAAGATCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTASGGAN*SARSGR
Trigger: TCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTCAGGAGGGGCAAACTaGTCTGCAAGATCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEESGGAN*SARSGR
Trigger: TCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGAGGAGGCAGTGCTGGTaGAGGCTGTCGTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEERRQCW*RLSFIP
Trigger: TGGAATGAACGACAGCCTGCACCAGCACTGCCTCCT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCGCTTTATCTTTAGGATaGTACACTGGGTGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLALSLG*YTGWEK
Trigger: TTTTTCCCACCCAGTGTAGCATCCTAAAGATAAAGC...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTCATTGTGCTTTAAACTaGCCCTTTCTAAAAATGACC +
Preference number: 4 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAHCALN*PFLKMT
Trigger: GGTCATTTTTAGAAAGGGGCAGTTTAAAGCACAATG...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATCTGTTCTTAGGCAGTaGCACTTCACTCTGGCACTT +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKASVLRQ*HFTLAL
Trigger: AAGTGCCAGAGTGAAGTGGCACTGCCTAAGAACAGA...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523872.1
CDS-3UTR CCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTTCATTTGGATTTCCTaGGATGTGCGGGTATATTCT +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIFIWIS*DVRVYS
Trigger: AGAATATACCCGCACATCCCAGGAAATCCAAATGAA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTTGCTGTACCGCTCTTaGGTCTGGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFLLYRS*VWHCSS
Trigger: TGAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACACAGGCTAAACCAGGCTaGACCAAACCTTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTQAKPG*TKPSQA
Trigger: GGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTG...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAACAGTGCGATGTGTCTaGGTCCACCGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTTVRCV*VHRAQQ
Trigger: TTGCTGTGCACGGTGGACCCAGACACATCGCACTGT...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGACAGTGCGATGTGTCTaGGTCCACCGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEETVRCV*VHRAQQ
Trigger: TTGCTGTGCACGGTGGACCCAGACACATCGCACTGT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCAGTTTTCGAAGAACCTaGTGCAACAGGAAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASSFRRT*CNRKRP
Trigger: CGGCCTCTTCCTGTTGCACCAGGTTCTTCGAAAACT...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTTTAGGAGGCAGTGCTaGTGCAGGCTGTCGTTCATT +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFFRRQC*CRLSFI
Trigger: AATGAACGACAGCCTGCACCAGCACTGCCTCCTAAA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTTGCTGTTTTGTTTATaGCACAATGCTTTACTTCGC +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLLLFCL*HNALLR
Trigger: GCGAAGTAAAGCATTGTGTCATAAACAAAACAGCAA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAGGCCTCAGGGTGGCTaGACTTCAGGAGAAGGATCA +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTRPQGG*TSGEGS
Trigger: TGATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATGTCCATCTGTCGTCTaGTTGTACCGTGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTACPSVV*LYRGTP
Trigger: TGGAGTGCCACGGTACAATCAGACGACAGATGGACA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAGCTTCTTCAATAGCTaGATATATTCTTCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPSFFNS*IYSSEL
Trigger: AAGCTCCGAAGAATATATTCAGCTATTGAAGAAGCT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTATCAGAGCTGGCTGCTaGGAATCTGAAAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSIRAGC*ESEKHR
Trigger: CCTATGCTTTTCAGATTCTCAGCAGCCAGCTCTGAT...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCATTGAATCTATAACTTaGACGAAATGTCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRIIESIT*TKCQGG
Trigger: GCCTCCTTGACATTTCGTTCAAGTTATAGATTCAAT...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACCCGGACAAGAAAAGTaGCATCTCGCTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTPGQEK*HLASLA
Trigger: TGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATGTCTGGGTCCACCGTaGACAGCAACATCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTCLGPP*TATSRL
Trigger: TAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATTGTTGTTCAACATCTaGTTCAGTTTTCGAAGAACC +
Preference number: 4 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPLLFNI*FSFRRT
Trigger: GGTTCTTCGAAAACTGAAGCAGATGTTGAACAACAA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTTGTTGTTCAACATCTaGTTCAGTTTTCGAAGAACC +
Preference number: 4 (lower is better)
Translates to: GALCFPEASGWLNFRRRILLFNI*FSFRRT
Trigger: GGTTCTTCGAAAACTGAAGCAGATGTTGAACAACAA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTATCAGGAGTGCCTCTaGTGTATCTATTCATATTCA +
Preference number: 4 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLYQECL*CIYSYS
Trigger: TGAATATGAATAGATACAGCAGAGGCACTCCTGATA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTCAGCTTAGGAACGTGTaGTCATCATACAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFQLRNV*SSYSLR
Trigger: CCTAAGGCTGTATGATGACCACACGTTCCTAAGCTG...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACAGGCTAAACCAGGCTaGACCAAACCTTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTQAKPG*TKPSQA
Trigger: GGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATCTGTCCTCCATCAATaGTGTGACCGAAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTASVLHQ*CDRRQG
Trigger: GCCCTGTCTTCGGTCACACCATTGATGGAGGACAGA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTAGGCCTCAGGGTGGCTaGACTTCAGGAGAAGGATCA +
Preference number: 4 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFRPQGG*TSGEGS
Trigger: TGATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCT...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTTGTCCATCTGTCGTCTaGTTGTACCGTGGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VLNKGERCSRNPKTNLALCPSVV*LYRGTP
Trigger: TGGAGTGCCACGGTACAATCAGACGACAGATGGACA...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCAGGAGATAGCGTTTaGAAGCGTCAGCCAAAACGT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEPGDSV*KRQPKR
Trigger: ACGTTTTGGCTGACGCTTTCAAACGCTATCTCCTGG...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR TCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACTCGTGTGTGTAATGTaGGGTCCCAATGCTCCCACT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTLVCVM*GPNAPT
Trigger: AGTGGGAGCATTGGGACCTCACATTACACACACGAG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTTGACTCGACACACTaGAAACAAGGATTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAFDSTH*KQGFPS
Trigger: GCTTGGAAATCCTTGTTTTCAGTGTGTCGAGTCAAA...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTCAGCTTTGTTTCGGTTaGTGCTTCCAACATTCCATG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFQLCFG*CFQHSM
Trigger: CATGGAATGTTGGAAGCAGCAACCGAAACAAAGCTG...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTCAGCTTTGTTTCGGTTaGTGCTTCCAACATTCCATG +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSQLCFG*CFQHSM
Trigger: CATGGAATGTTGGAAGCAGCAACCGAAACAAAGCTG...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGAGCAGCCCTGTTTACTaGTCTCCCGGACAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEESSPVY*SPGQEK
Trigger: CTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAAGCAGCCCTGTTTACTaGTCTCCCGGACAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTASSPVY*SPGQEK
Trigger: CTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAAGATGGCTTCGTTTCTaGAGCTCAATTCACAGATCA +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKARWLRF*SSIHRS
Trigger: TGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCT...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATTTCGAAGAACCTGGTaGAACAGGAAGAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTFRRTW*NRKRPR
Trigger: CCTCGGCCTCTTCCTGTTGCACCAGGTTCTTCGAAA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATACCGCTCTTGGGTCTaGCACTGTTCTTCAAATATT +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAYRSWV*HCSSNI
Trigger: AATATTTGAAGAACAGTGCCAGACCCAAGAGCGGTA...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTTGCTGTACCGCTCTTaGGTCTGGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEELLYRS*VWHCSS
Trigger: TGAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTATTGCTGTACCGCTCTTaGGTCTGGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLLLYRS*VWHCSS
Trigger: TGAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAA...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCACTCGTCTTTCTCAGCTaGATAAGGTCTGGTTTAATG +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKALVFLS*IRSGLM
Trigger: CATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAGCGTCCCTTGTGAGTaGACGTGCCTTTCTGCTACA +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTSVPCE*TCLSAT
Trigger: TGTAGCAGAAAGGCACGTCCACTCACAAGGGACGCT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCATTCAACCACAGAACTaGAGGTTAATGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASIQPQN*RLMGQR
Trigger: TCTCTGACCCATTAACCTTCAGTTCTGTGGTTGAAT...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTAAAACGGCTGCTGGAATaGCAGGATTTGGTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLKRLLE*QDLVSP
Trigger: TGGACTTACCAAATCCTGTCATTCCAGCAGCCGTTT...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAATCAGAGCTGGCTGCTaGGAATCTGAAAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAIRAGC*ESEKHR
Trigger: CCTATGCTTTTCAGATTCTCAGCAGCCAGCTCTGAT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTCTTTGTTTCGGTTGCTaGTTCCAACATTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSLCFGC*FQHSMS
Trigger: AGACATGGAATGTTGGAAGCAGCAACCGAAACAAAG...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAGCAGCCCTGTTTACTaGTCTCCCGGACAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTSSPVY*SPGQEK
Trigger: CTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTTGTTTATGACACAATaGTTTACTTCGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFLFMTQ*FTSPST
Trigger: GGTGGACGGCGAAGTAAAGCATTGTGTCATAAACAA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCAGATGGCTTCGTTTCTaGAGCTCAATTCACAGATCA +
Preference number: 4 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASRWLRF*SSIHRS
Trigger: TGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCT...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGAGGCCTCTTTGTCCCTaGACGCAGAGATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEERPLCP*TQRFLH
Trigger: ATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTAAGGCCTCTTTGTCCCTaGACGCAGAGATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLRPLCP*TQRFLH
Trigger: ATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCT...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCTTGTGAGTGGACGTaGCTTTCTGCTACATATCGT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEPCEWT*LSATYR
Trigger: ACGATATGTAGCAGAAAGGCACGTCCACTCACAAGG...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTAAGCTTATCAGGCACTaGCCAACAAAACAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSKLIRH*PTKQSK
Trigger: TTTGGACTGTTTTGTTGGGCAGTGCCTGATAAGCTT...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTTTAGGAGGCAGTGCTaGTGGGTCCATTTCTATATA +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSFRRQC*WVHFYI
Trigger: TATATAGAAATGGACCCACCAGCACTGCCTCCTAAA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336483.9
CDS-3UTR CCA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCTACCGCTCTTGGGTCTaGCACTGTTCTTCAAATATT +
Preference number: 4 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASYRSWV*HCSSNI
Trigger: AATATTTGAAGAACAGTGCCAGACCCAAGAGCGGTA...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTCAGCTGGATAAGGTCTaGTTTAATGCTGTTCATACG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFQLDKV*FNAVHT
Trigger: CGTATGAACAGCATTAAACCAGACCTTATCCAGCTG...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTCTCGTCTTTCTCAGCTaGATAAGGTCTGGTTTAATG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFLVFLS*IRSGLM
Trigger: CATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACACAGCTTAGGAACGTGTaGTCATCATACAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTQLRNV*SSYSLR
Trigger: CCTAAGGCTGTATGATGACCACACGTTCCTAAGCTG...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTCAAGCAACAAAAACTaGGGTGGGGAAGCTTATTCT +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFSSNKN*GGEAYS
Trigger: AGAATAAGCTTCCCCACCCCAGTTTTTGTTGCTTGA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTAGTAGTAGGTTTTGGTaGTTTAGGAGGCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSSSRFW*FRRQCL
Trigger: CAAACACTGCCTCCTAAACCACCAAAACCTACTACT...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR CCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTACAGTAGTAGGTTTTaGTGGTTTAGGAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSYSSRF*WFRRQC
Trigger: ACACTGCCTCCTAAACCACCAAAACCTACTACTGTA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR CCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTTTTAGGAGGCAGTGCTaGTGCAGGCTGTCGTTCATT +
Preference number: 4 (lower is better)
Translates to: VLNKGERCSRNPKTNLALFRRQC*CRLSFI
Trigger: AATGAACGACAGCCTGCACCAGCACTGCCTCCTAAA...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGAGAAGGACTGCCACTTaGATTCCTGCAATGACCATG +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEERRTAT*IPAMTM
Trigger: CATGGTCATTGCAGGAATCCAAGTGGCAGTCCTTCT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTAATTTGGGATTATACTaGGCTAGAGATTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFNLGLY*ARDSFR
Trigger: CCGGAATGAATCTCTAGCTCAGTATAATCCCAAATT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTCTTCTGAACATACATaGACTGACATTCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFSSEHT*TDILPK
Trigger: CTTTGGGAGAATGTCAGTTCATGTATGTTCAGAAGA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTTCAGTTGTCTGGCGATaGGAGGGAAATGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFSVVWR*EGNGQI
Trigger: GATCTGACCATTTCCCTCTCATCGCCAGACAACTGA...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTATGGATCTGTTTTGGCTaGAAGGTGTACTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLWICFG*KVYWKH
Trigger: GTGTTTCCAGTACACCTTTCAGCCAAAACAGATCCA...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATGTACTTTATGTACTTaGACTCAACAACTACTGTGG +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKACTLCT*TQQLLW
Trigger: CCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACA...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTGGATTTCCTGGGATGTaGGGGTATATTCTTCATATA +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSGFPGM*GYILHI
Trigger: TATATGAAGAATATACCCGCACATCCCAGGAAATCC...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACATTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTFSILS*LLLQVF
Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAA...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACACAGCTTTGTTTCGGTTaGTGCTTCCAACATTCCATG +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTQLCFG*CFQHSM
Trigger: CATGGAATGTTGGAAGCAGCAACCGAAACAAAGCTG...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAGGCCTCTTTGTCCCTaGACGCAGAGATTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTRPLCP*TQRFLH
Trigger: ATGCAAAAATCTCTGCGTGCAGGGACAAAGAGGCCT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTGGTTTCCCTTTGAAATaGCTGTATCCGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSGFPLK*LYPTMK
Trigger: TTTCATTGTCGGATACAGGCATTTCAAAGGGAAACC...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR GCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTAGTGTTTGCAGGTTATaGATTTCAACGGTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFSVCRL*ISTVSL
Trigger: AAGGGAAACCGTTGAAATGCATAACCTGCAAACACT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR GCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATTCCACTTCCTCTGCGTaGCACAGTCCTCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDSTSSA*HSPLTG
Trigger: GCCAGTGAGAGGACTGTGGCACGCAGAGGAAGTGGA...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTCATGTTTGCAAATCTaGTACCATGCAACAGTTGAG +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSSCLQI*YHATVE
Trigger: CTCAACTGTTGCATGGTAGCAGATTTGCAAACATGA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACATTCACTGTAAACGGCTaGTGGAATGACAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTFTVNG*WNDRIW
Trigger: CCAAATCCTGTCATTCCAGCAGCCGTTTACAGTGAA...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACAATCACAGCCTCACTaGAGCTTAGCTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTQSQPH*SLASGF
Trigger: AAAGCCAGAAGCTAAGCTGCAGTGAGGCTGTGATTG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGATTCAACCACAGAACTaGAGGTTAATGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEIQPQN*RLMGQR
Trigger: TCTCTGACCCATTAACCTTCAGTTCTGTGGTTGAAT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp ACTTTAAAGCAGAGACGCAGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGATGCCGAACACCTTTTTaGGTCAACCACATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: TLKQRRRLKPGKSSVVWRCRTPF*VNHIKY
Trigger: ATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCA...TCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCTGCGTCTCTGCTTTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp ACTTTAAAGCAGAGACGCAGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGACTGGGTGGGAAAAACTaGCGCATGGATAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: TLKQRRRLKPGKSSVVWRLGGKN*RMDKNH
Trigger: ATGATTTTTATCCATGCGTCAGTTTTTCCCACCCAG...TCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCTGCGTCTCTGCTTTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTCACATAAACACATTTTaGCTCGACACACTGAAAACA +
Preference number: 4 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSHINTF*LDTLKT
Trigger: TGTTTTCAGTGTGTCGAGTCAAAATGTGTTTATGTG...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp CCATGCATTTTAGTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCTGTATCTCAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PCILVDASRTKKVPSAVSQKGPV*CISKFF
Trigger: GAAAAACTTCGAGATACAGCAGACGGGACCTTTTTG...AGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTACTAAAATGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR GCA 90 bp ATAATCACCATGCATTTTAGTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCTTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: IITMHFSRRISYQKGPVCFSILS*LLLQVF
Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAA...GCAGACGGGACCTTTTTGGTACGAGATGCGTCTACTAAAATGCATGGTGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTFSILS*LLLQVF
Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp ACTTTAAAGCAGAGACGCAGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGACTTTGTTTCGGTTGCTaGTTCCAACATTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TLKQRRRLKPGKSSVVWRLCFGC*FQHSMS
Trigger: AGACATGGAATGTTGGAAGCAGCAACCGAAACAAAG...TCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCTGCGTCTCTGCTTTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCTTTGTTTCGGTTGCTaGTTCCAACATTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEELCFGC*FQHSMS
Trigger: AGACATGGAATGTTGGAAGCAGCAACCGAAACAAAG...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGAGATGGCTTCGTTTCTaGAGCTCAATTCACAGATCA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEERWLRF*SSIHRS
Trigger: TGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTCATACAGCCTTAGGCTaGATGTCTTCCCCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFHTALG*MSSPTS
Trigger: AGAAGTAGGGGAAGACATGCAGCCTAAGGCTGTATG...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAGTGGACGTGCCTTTCTaGTACATATCGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTVDVPF*YISFIC
Trigger: ACAAATGAACGATATGTAGCAGAAAGGCACGTCCAC...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACACTCAGCACTCATGTTTaGAAATCTGCTACCATGCAA +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTLSTHV*KSATMQ
Trigger: TTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAG...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCTCAGCACTCATGTTTaGAAATCTGCTACCATGCAA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEELSTHV*KSATMQ
Trigger: TTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAG...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAAATATGTCACCCAAGTaGAAGTCAATATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSSALQSPNFQLVKLQKANMSPK*KSISSS
Trigger: AGAAGAAGATATTGACTTGCACTTGGGTGACATATT...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAAAGCTTATCAGGCACTaGCCAACAAAACAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTKLIRH*PTKQSK
Trigger: TTTGGACTGTTTTGTTGGGCAGTGCCTGATAAGCTT...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAAGGAGGCAGTGCTGGTaGGTCCATTTCTATATAAAA +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTARRQCW*VHFYIK
Trigger: TTTTATATAGAAATGGACCCACCAGCACTGCCTCCT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336483.9
CDS-3UTR CCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACATACCGCTCTTGGGTCTaGCACTGTTCTTCAAATATT +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTYRSWV*HCSSNI
Trigger: AATATTTGAAGAACAGTGCCAGACCCAAGAGCGGTA...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp CGTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTTTGCTGTACCGCTCTTaGGTCTGGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RSTSFAEHLFESTTSSIGLLYRS*VWHCSS
Trigger: TGAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAA...ACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCAGCTGGATAAGGTCTaGTTTAATGCTGTTCATACG +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEQLDKV*FNAVHT
Trigger: CGTATGAACAGCATTAAACCAGACCTTATCCAGCTG...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACAGCTGGATAAGGTCTaGTTTAATGCTGTTCATACG +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAQLDKV*FNAVHT
Trigger: CGTATGAACAGCATTAAACCAGACCTTATCCAGCTG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACTCGTCTTTCTCAGCTaGATAAGGTCTGGTTTAATG +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTALVFLS*IRSGLM
Trigger: CATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAAACCACATCAAGTATTaGTCTCTCGTCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTNHIKY*SLVFLS
Trigger: GCTGAGAAAGACGAGAGACCAATACTTGATGTGGTT...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTCAAGCAACAAAAACTaGGGTGGGGAAGCTTATTCT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEESSNKN*GGEAYS
Trigger: AGAATAAGCTTCCCCACCCCAGTTTTTGTTGCTTGA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp ACTTTAAAGCAGAGACGCAGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGATCAAGCAACAAAAACTaGGGTGGGGAAGCTTATTCT +
Preference number: 4 (lower is better)
Translates to: TLKQRRRLKPGKSSVVWRSSNKN*GGEAYS
Trigger: AGAATAAGCTTCCCCACCCCAGTTTTTGTTGCTTGA...TCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCTGCGTCTCTGCTTTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTCCACAGTCCTCTCACTaGCTTCCTTTTCAGCAACTT +
Preference number: 4 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFPQSSH*LPFQQL
Trigger: AAGTTGCTGAAAAGGAAGCCAGTGAGAGGACTGTGG...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATGGGCAGAACAGGTCTaGTGTAACTCAAGTCATATG +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTWAEQV*CNSSHM
Trigger: CATATGACTTGAGTTACACCAGACCTGTTCTGCCCA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAAATTTGGGATTATACTaGGCTAGAGATTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTANLGLY*ARDSFR
Trigger: CCGGAATGAATCTCTAGCTCAGTATAATCCCAAATT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATGCCGAACACCTTTTTaGGTCAACCACATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTCRTPF*VNHIKY
Trigger: ATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAATCATCTTCCACCAGTaGATATTGGTCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTIIFHQ*ILVFSV
Trigger: AACACTGAAGACCAATATTCACTGGTGGAAGATGAT...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGATCATCTTCCACCAGTaGATATTGGTCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEIIFHQ*ILVFSV
Trigger: AACACTGAAGACCAATATTCACTGGTGGAAGATGAT...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAATCATCTTCCACCAGTaGATATTGGTCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAIIFHQ*ILVFSV
Trigger: AACACTGAAGACCAATATTCACTGGTGGAAGATGAT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATCTTCTGAACATACATaGACTGACATTCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTASSEHT*TDILPK
Trigger: CTTTGGGAGAATGTCAGTTCATGTATGTTCAGAAGA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTACTTTTCACATGGTTATaGTCTCTCGTGTGTGTAATG +
Preference number: 4 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLLFTWL*SLVCVM
Trigger: CATTACACACACGAGAGATCATAACCATGTGAAAAG...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp GTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCTGTATCTCGAAGTTTTTCAGGATTTCCTGGGATGTaGGGGTATATTCTTCATATA +
Preference number: 4 (lower is better)
Translates to: VDASRTKKVPSAVSRSFSGFPGM*GYILHI
Trigger: TATATGAAGAATATACCCGCACATCCCAGGAAATCC...TGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR GCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGGGATTTCCTGGGATGTaGGGGTATATTCTTCATATA +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEGFPGM*GYILHI
Trigger: TATATGAAGAATATACCCGCACATCCCAGGAAATCC...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATTTCTATGTATTCTTTaGTGTACCGCTCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAFLCIL*CTALGS
Trigger: AGACCCAAGAGCGGTACAGCAAAGAATACATAGAAA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp CCATGCATTTTAGTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCTGTATCTTTTCTATGTATTCTTTaGTGTACCGCTCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PCILVDASRTKKVPSAVSFLCIL*CTALGS
Trigger: AGACCCAAGAGCGGTACAGCAAAGAATACATAGAAA...AGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTACTAAAATGCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATTGTTTATGACACAATaGTTTACTTCGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTLFMTQ*FTSPST
Trigger: GGTGGACGGCGAAGTAAAGCATTGTGTCATAAACAA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTAGGGAGTCGTTGTGCTaGACAAGGGAGGTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVRESLC*TREVCW
Trigger: CCAACACACCTCCCTTGTGCAGCACAACGACTCCCT...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATTTGAGGGAGTCGTTGTaGTGCACAAGGGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDLRESL*CTREVC
Trigger: ACACACCTCCCTTGTGCAGCACAACGACTCCCTCAA...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGTGGACGTGCCTTTCTaGTACATATCGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTVDVPF*YISFIC
Trigger: ACAAATGAACGATATGTAGCAGAAAGGCACGTCCAC...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTTGGTTTAGGAGGCAGTaGTGGTGCAGGCTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVWFRRQ*WCRLSF
Trigger: GAACGACAGCCTGCACCAGCACTGCCTCCTAAACCA...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTGATTTTTCACTCAGCTaGAAGACTGATTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFDFSLS*KTDSFK
Trigger: TTTGAAAGAATCAGTCTTGCAGCTGAGTGAAAAATC...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp ACTTTAAAGCAGAGACGCAGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGAACAGATCTCAGTGTCTaGGTTTCAACTAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: TLKQRRRLKPGKSSVVWRTDLSV*VSTNLD
Trigger: ATCCAAGTTAGTTGAAACGCAGACACTGAGATCTGT...TCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCTGCGTCTCTGCTTTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTTCATTTGGATTTCCTaGGATGTGCGGGTATATTCT +
Preference number: 4 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEFIWIS*DVRVYS
Trigger: AGAATATACCCGCACATCCCAGGAAATCCAAATGAA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTCTCGTCTTTCTCAGCTaGATAAGGTCTGGTTTAATG +
Preference number: 4 (lower is better)
Translates to: VLNKGERCSRNPKTNLALLVFLS*IRSGLM
Trigger: CATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 72 bp AGCTGGATAAGGTCTGGTTTAATGCTGTTCATACGTTaGTCAATTTCTCGATACTCAGCTGCCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SWIRSGLMLFIR*SISRYSAACFF
Trigger: GAAGAAGCAGGCAGCTGAGTATCGAGAAATTGACAAACGTATGAACAGCATTAAACCAGACCTTATCCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR TCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTAATTTGGGATTATACTaGGCTAGAGATTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: VLNKGERCSRNPKTNLALNLGLY*ARDSFR
Trigger: CCGGAATGAATCTCTAGCTCAGTATAATCCCAAATT...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp CAGTGTTTTCATTGCCCAACCACTCGTTCAACTTCTTTTGCCGAACACCTTTTTTGCCGAACACCTTTTTaGGTCAACCACATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: QCFHCPTTRSTSFAEHLFCRTPF*VNHIKY
Trigger: ATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCA...AAAAAGGTGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR TCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAATCATCTTCCACCAGTaGATATTGGTCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTIIFHQ*ILVFSV
Trigger: AACACTGAAGACCAATATTCACTGGTGGAAGATGAT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTATCATCTTCCACCAGTaGATATTGGTCTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VLNKGERCSRNPKTNLALIIFHQ*ILVFSV
Trigger: AACACTGAAGACCAATATTCACTGGTGGAAGATGAT...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATTGCTGTTTTGTTTATaGCACAATGCTTTACTTCGC +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTALLFCL*HNALLR
Trigger: GCGAAGTAAAGCATTGTGTCATAAACAAAACAGCAA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACATTGCTGTTTTGTTTATaGCACAATGCTTTACTTCGC +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTLLFCL*HNALLR
Trigger: GCGAAGTAAAGCATTGTGTCATAAACAAAACAGCAA...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR TCA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTTCTTCTGAACATACATaGACTGACATTCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VLNKGERCSRNPKTNLALSSEHT*TDILPK
Trigger: CTTTGGGAGAATGTCAGTTCATGTATGTTCAGAAGA...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATTGTTCTAAACAAAGGTaGGCGCTGTTCCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDCSKQR*ALFQEP
Trigger: GGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAACA...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAGATAGTCTTTCCAATTaGCTCAATTCTATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTDSLSN*LNSISS
Trigger: GGAGGAAATAGAATTGAGTCAATTGGAAAGACTATC...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTGTGGACGTGCCTTTCTaGTACATATCGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFVDVPF*YISFIC
Trigger: ACAAATGAACGATATGTAGCAGAAAGGCACGTCCAC...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp ATCAAGTATTGGTCTCTCGTCTTTCTCAGCTGGATAAGGTCTGGTTTAATGCTGCTCGTCTTTCTCAGCTaGATAAGGTCTGGTTTAATG +
Preference number: 4 (lower is better)
Translates to: IKYWSLVFLSWIRSGLMLLVFLS*IRSGLM
Trigger: CATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG...CAGCATTAAACCAGACCTTATCCAGCTGAGAAAGACGAGAGACCAATACTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp GTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCTGTATCTCGAAGTTTTTCATCACTTCTTCCCTGGTaGGTCCATTTCTATATAAAA +
Preference number: 4 (lower is better)
Translates to: VDASRTKKVPSAVSRSFSSLLPW*VHFYIK
Trigger: TTTTATATAGAAATGGACCCACCAGGGAAGAAGTGA...TGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp CACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCTCGTCTTTCTCAGCTGGACATTCACTTCTTCCCTaGTGGGTCCATTTCTATATA +
Preference number: 4 (lower is better)
Translates to: HLFESTTSSIGLSSFSAGHSLLP*WVHFYI
Trigger: TATATAGAAATGGACCCACCAGGGAAGAAGTGAATG...TCCAGCTGAGAAAGACGAGAGACCAATACTTGATGTGGTTGACTCAAAAAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAACCCAAAAACAAACTTaGCACTTCCTTCCTAAGAAC +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTTQKQT*HFLPKN
Trigger: GTTCTTAGGAAGGAAGTGCCAAGTTTGTTTTTGGGT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CCA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAAAGAATTTGGCATTTTaGAACTTTGTCCCATGTGAG +
Preference number: 4 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAKNLAF*NFVPCE
Trigger: CTCACATGGGACAAAGTTCCAAAATGCCAAATTCTT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 72 bp TATGTACTTGAACTCAACAACTACTGTGGATCTGTTTaGGCTGAAAGGTGTACTGGAAACACAGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: YVLELNNYCGSV*AERCTGNTVHA
Trigger: TGCATGGACTGTGTTTCCAGTACACCTTTCAGCCAAAACAGATCCACAGTAGTTGTTGAGTTCAAGTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp TCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCATTCAACCACAGAACTaGAGGTTAATGGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: STSFAEHLFESTTSSIGLIQPQN*RLMGQR
Trigger: TCTCTGACCCATTAACCTTCAGTTCTGTGGTTGAAT...GAGACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR TCA 90 bp CAGTGTTTTCATTGCCCAACCACTCGTTCAACTTCTTTTGCCGAACACCTTTTTAATTTGGGATTATACTaGGCTAGAGATTCATTCCGG +
Preference number: 4 (lower is better)
Translates to: QCFHCPTTRSTSFAEHLFNLGLY*ARDSFR
Trigger: CCGGAATGAATCTCTAGCTCAGTATAATCCCAAATT...AAAAAGGTGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR TCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTCCAGGAGATAGCGTTTaGAAGCGTCAGCCAAAACGT +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVPGDSV*KRQPKR
Trigger: ACGTTTTGGCTGACGCTTTCAAACGCTATCTCCTGG...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAATCATATATCAGGAGTaGCTCTGCTGTATCTATTCA +
Preference number: 4 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTIIYQE*LCCIYS
Trigger: TGAATAGATACAGCAGAGGCACTCCTGATATATGAT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAGAATTCTTAGAGTTGTaGTTAATAGATAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SALQSPNFQLVKLQKALTEFLEL*LIDRVP
Trigger: AGGCACTCTATCTATTAAGCACAACTCTAAGAATTC...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523872.1
CDS-3UTR CCA 90 bp CAGTGTTTTCATTGCCCAACCACTCGTTCAACTTCTTTTGCCGAACACCTTTTTTTCATTTGGATTTCCTaGGATGTGCGGGTATATTCT +
Preference number: 4 (lower is better)
Translates to: QCFHCPTTRSTSFAEHLFFIWIS*DVRVYS
Trigger: AGAATATACCCGCACATCCCAGGAAATCCAAATGAA...AAAAAGGTGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp GTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTACCGCTCTTGGGTCTaGCACTGTTCTTCAAATATT +
Preference number: 4 (lower is better)
Translates to: VQLLLPNTFLSQPHQVLVYRSWV*HCSSNI
Trigger: AATATTTGAAGAACAGTGCCAGACCCAAGAGCGGTA...GACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp GTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCCAGCTGGATAAGGTCTaGTTTAATGCTGTTCATACG +
Preference number: 4 (lower is better)
Translates to: VQLLLPNTFLSQPHQVLVQLDKV*FNAVHT
Trigger: CGTATGAACAGCATTAAACCAGACCTTATCCAGCTG...GACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp TCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCAACCACATCAAGTATTaGTCTCTCGTCTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: STSFAEHLFESTTSSIGLNHIKY*SLVFLS
Trigger: GCTGAGAAAGACGAGAGACCAATACTTGATGTGGTT...GAGACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATTTTAGGATGCTACACTaGGTGGGAAAAACTGACGCA +
Preference number: 4 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDFRMLH*VGKTDA
Trigger: TGCGTCAGTTTTTCCCACCCAGTGTAGCATCCTAAA...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 72 bp GTGAGTGGACGTGCCTTTCTGCTACATATCGTTCATTaGTTACAAAATGAAATAATCCACAGTGCGATGTGT +
Preference number: 4 (lower is better)
Translates to: VSGRAFLLHIVH*LQNEIIHSAMC
Trigger: ACACATCGCACTGTGGATTATTTCATTTTGTAACAAATGAACGATATGTAGCAGAAAGGCACGTCCACTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
3UTR CAA 72 bp GCCATGAAGTTATCAGATGTTGCAAACACATGCTTTTaGCCTTTTCACATGGTTATGATCTCTCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AMKLSDVANTCF*PFHMVMISRVC
Trigger: ACACACACGAGAGATCATAACCATGTGAAAAGGCAAAAAGCATGTGTTTGCAACATCTGATAACTTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTTTCTCGATACTCAGCTaGCTGCTTCTTCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVFSILS*LLLQVF
Trigger: GAAGACTTGAAGAAGCAGGCAGCTGAGTATCGAGAA...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 72 bp TGTACTAGACGTTCGCTTGTTATGTACTTTATGTACTaGAACTCAACAACTACTGTGGATCTGTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: CTRRSLVMYFMY*NSTTTVDLFWL
Trigger: CAGCCAAAACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAACGTCTAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR TCA 90 bp TGCTGTATCTATTCATATTCAGCCGTTCAGACAATATTGTTAGGACTGTCTGATAGAGCAGTGACAGTATaGCTGTGTCTATTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: CCIYSYSAVQTILLGLSDRAVTV*LCLFAL
Trigger: TAAAGCAAATAGACACAGTCATACTGTCACTGCTCT...ATCAGACAGTCCTAACAATATTGTCTGAACGGCTGAATATGAATAGATACAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTCAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVQKGPV*CISKFF
Trigger: GAAAAACTTCGAGATACAGCAGACGGGACCTTTTTG...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTTTGTTTATGACACAATaGTTTACTTCGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVLFMTQ*FTSPST
Trigger: GGTGGACGGCGAAGTAAAGCATTGTGTCATAAACAA...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTCCATGTGAGACATTGTaGTTTAAACTGCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVPCETL*FKLPLS
Trigger: AGAAAGGGGCAGTTTAAAGCACAATGTCTCACATGG...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 72 bp ACTCAAACAGATCTCAGTGTCTGCGTTTCAACTAACTaGGATACCATACATAGCAAAAGCACAGTTGTTAAA +
Preference number: 4 (lower is better)
Translates to: TQTDLSVCVSTN*DTIHSKSTVVK
Trigger: TTTAACAACTGTGCTTTTGCTATGTATGGTATCCAAGTTAGTTGAAACGCAGACACTGAGATCTGTTTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
3UTR CAA 72 bp GCAAAAATAAGGCAAATGCCTAAATACCGTATCATCTaGCAAAGAATGTTGAAGCACAAAGATTCACAAAAC +
Preference number: 4 (lower is better)
Translates to: AKIRQMPKYRII*QRMLKHKDSQN
Trigger: GTTTTGTGAATCTTTGTGCTTCAACATTCTTTGCAAGATGATACGGTATTTAGGCATTTGCCTTATTTTTGC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR GCA 90 bp TTCGCTTGTTATGTACTTTATGTACTTGAACTCAACAACTACTGTGGATCTGTTAATATGTCACCCAAGTaGAAGTCAATATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FACYVLYVLELNNYCGSVNMSPK*KSISSS
Trigger: AGAAGAAGATATTGACTTGCACTTGGGTGACATATT...AACAGATCCACAGTAGTTGTTGAGTTCAAGTACATAAAGTACATAACAAGCGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp CCGGCTTCCTTCCTCTGCGGGGCCCGCGCTGCAGCGGTGGCCTCCTaGCCGCTCGGTTCCGACCGGCCTCCAGCCCGGCTGCGACCCGCC +
Preference number: 5 (lower is better)
Translates to: PASFLCGARAAAVAS*PLGSDRPPARLRPA
Trigger: GGCGGGTCGCAGCCGGGCTGGAGGCCGGTCGGAACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGGCCCCGCAGAGGAAGGAAGCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS GCA 90 bp CCCAGCCTGTTCCCGGCAGGCAGTGCTCGTGTCCGGCGCCGAGAGTaGGCGCAGGAGCGGGGGCGCCGCCAGGACCCTCCGGGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: PSLFPAGSARVRRRE*AQERGRRQDPPGVH
Trigger: GTGCACGCCCGGAGGGTCCTGGCGGCGCCCCCGCTCCTGCGCGCACTCTCGGCGCCGGACACGAGCACTGCCTGCCGGGAACAGGCTGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS GCA 90 bp GCCTCCAGCCCGGCTGCGACCCGCCGGCCGTGCCCGATCCGTGCTTaGCGTCTCCGACAGCTAGCCTGCCGCCCTCGCCGCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: ASSPAATRRPCPIRA*RLRQLACRPRRCRC
Trigger: GCAGCGGCAGCGGCGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGGGCTGGAGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS GCA 90 bp ACCGGCCTCCAGCCCGGCTGCGACCCGCCGGCCGTGCCCGATCCGTaGTTGCCGTCTCCGACAGCTAGCCTGCCGCCCTCGCCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: TGLQPGCDPPAVPDP*LPSPTASLPPSPLP
Trigger: CGGCAGCGGCGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGGGCTGGAGGCCGGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS GCA 90 bp GAGAGTGCGCGCAGGAGCGGGGGCGCCGCCAGGACCCTCCGGGCGTaGACAGTGGCCCAGCTCCGCTTGGCTCGGCTCGGCTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: ESARRSGGAARTLRA*TVAQLRLARLGSSL
Trigger: GAGGGACGAGCCGAGCCGAGCCAAGCGGAGCTGGGCCACTGTGCACGCCCGGAGGGTCCTGGCGGCGCCCCCGCTCCTGCGCGCACTCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS GCA 90 bp AGCTTCACCCCGCCCGCCGGCTTCCTTCCTCTGCGGGGCCCGCGCTaGAGCGGTGGCCTCCTGCCCGCTCGGTTCCGACCGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SFTPPAGFLPLRGPR*SGGLLPARFRPASS
Trigger: GCTGGAGGCCGGTCGGAACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGGCCCCGCAGAGGAAGGAAGCCGGCGGGCGGGGTGAAGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp TCACCTACCCCGCCCGCCGGCTTCCTTCCTCTGCGGGGCCCGCGCTaGAGCGGTGGCCTCCTGCCCGCTCGGTTCCGACCGGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SPTPPAGFLPLRGPR*SGGLLPARFRPASS
Trigger: GCTGGAGGCCGGTCGGAACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGGCCCCGCAGAGGAAGGAAGCCGGCGGGCGGGGTAGGTGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521657.5
CDS GCA 90 bp TGGCTCGGCTCGGCTCGTCCCTCCGCCCCACGCCCCGCCCGGCAGTaGGTCCGGGCCACCGCCGCTCACTGCCGGCTCCTCATTGAGAAG +
Preference number: 5 (lower is better)
Translates to: WLGSARPSAPRPARQ*VRATAAHCRLLIEK
Trigger: CTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGCCCGGACGCACTGCCGGGCGGGGCGTGGGGCGGAGGGACGAGCCGAGCCGAGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS GCA 90 bp GCTCGGTTCCGACCGGCCTCCAGCCCGGCTGCGACCCGCCGGCCGTaGCCGATCCGTGCTTGCCGTCTCCGACAGCTAGCCTGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: ARFRPASSPAATRRP*PIRACRLRQLACRP
Trigger: AGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGGGCTGGAGGCCGGTCGGAACCGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS GCA 90 bp CGCCGGCCGTGCCCGATCCGTGCTTGCCGTCTCCGACAGCTAGCCTaGCGCCCTCGCCGCTGCCGCTGCTTCCTCCAACTCCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRPCPIRACRLRQLA*RPRRCRCFLQLRSS
Trigger: GCTGGAGCGGAGTTGGAGGAAGCAGCGGCAGCGGCGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp TCCACACACGAGCTTCACCTACCCCGCCCGCCGGCTTCCTTCCTCTaGGGGGCCCGCGCTGCAGCGGTGGCCTCCTGCCCGCTCGGTTCC +
Preference number: 5 (lower is better)
Translates to: STHELHLPRPPASFL*GARAAAVASCPLGS
Trigger: GGAACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGGCCCCGCAGAGGAAGGAAGCCGGCGGGCGGGGTAGGTGAAGCTCGTGTGTGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521657.5
CDS GCA 90 bp GCCCCACGCCCCGCCCGGCAGTGCGTCCGGGCCACCGCCGCTCACTaGCGGCTCCTCATTGAGAAGCCAACTGGATTTCGCTACTGTATC +
Preference number: 5 (lower is better)
Translates to: APRPARQCVRATAAH*RLLIEKPTGFRYCI
Trigger: GATACAGTAGCGAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGCCCGGACGCACTGCCGGGCGGGGCGTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS TCA 90 bp CCGGCAGTGCGTCCGGGCCACCGCCGCTCACTGCCGGCTCCTCATTaGGAAGCCAACTGGATTTCGCTACTGTATCGGGGAGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: PAVRPGHRRSLPAPH*EANWISLLYRGGKE
Trigger: CTCCTTTCCTCCCCGATACAGTAGCGAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGCCCGGACGCACTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR CAA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTGGAGAGGAGCCCTTaGCTTTCCAGAGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLERSP*LSRGLR
Trigger: CCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCGTGCCCGATCCGTGCTaGCCGTCTCCGACAGCTAGC +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIVPDPC*PSPTAS
Trigger: GCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCAC...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCCTGGAGAGGAGCCCTTaGCTTTCCAGAGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGLERSP*LSRGLR
Trigger: CCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAG...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTCTGGAGAGGAGCCCTTaGCTTTCCAGAGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: RLDQTFSGQGSSASLSSALERSP*LSRGLR
Trigger: CCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAG...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS CCA 90 bp AGGAGAGGTGACTGGCCATACGGCTGTCCATCTGTCCTCCATCAATaGTGTGACCGAAGACAGGGCTCCACTTCCTCTGCGTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: RRGDWPYGCPSVLHQ*CDRRQGSTSSACHS
Trigger: ACTGTGGCACGCAGAGGAAGTGGAGCCCTGTCTTCGGTCACACCATTGATGGAGGACAGATGGACAGCCGTATGGCCAGTCACCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517643.1
ENST00000521381.6
ENST00000521657.5
CDS CCA 90 bp TCTGACACTTTTGTCACACTGTCCATCTGTCGTCTGATTGTACCGTaGCACTCCACACACGAGCTTCACCTACCCCGCCCGCCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SDTFVTLSICRLIVP*HSTHELHLPRPPAS
Trigger: GGAAGCCGGCGGGCGGGGTAGGTGAAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACGACAGATGGACAGTGTGACAAAAGTGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521657.5
CDS-3UTR CAA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCAGGGAAATCGTCAGTaGTCTGGCGATGAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPQGNRQ*SGDERE
Trigger: TTCCCTCTCATCGCCAGACAACTGACGATTTCCCTG...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS TCA 90 bp GCCCAATCCTTTCTGACACTTTTGTCACACTGTCCATCTGTCGTCTaGTTGTACCGTGGCACTCCACACACGAGCTTCACCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: AQSFLTLLSHCPSVV*LYRGTPHTSFTPPA
Trigger: GGCGGGCGGGGTGAAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACGACAGATGGACAGTGTGACAAAAGTGTCAGAAAGGATTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp CTTCGCCGTCCACCACTACAGAGCAGGCATAGCAGCCCTGTTTACTaGTCTCCCGGACAAGAAAAGTGCCATCTCGCTTCCCTCGCAACA +
Preference number: 5 (lower is better)
Translates to: LRRPPLQSRHSSPVY*SPGQEKCHLASLAT
Trigger: TGTTGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCTATGCCTGCTCTGTAGTGGTGGACGGCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS GCA 90 bp ACGAGCTTGATAAGAAGAGGCGGGGCAATGTCAGGAGGGGCAAACTaGTCTGCAAGATCCGGGAGAGTCAAAGCTCTTTCCAGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: TSLIRRGGAMSGGAN*SARSGRVKALSSLR
Trigger: CCGCAGGCTGGAAAGAGCTTTGACTCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGACATTGCCCCGCCTCTTCTTATCAAGCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520675.1
CDS-3UTR CAA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTTTGCTGTACCGCTCTaGGGTCTGGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGFAVPL*GLALFF
Trigger: GAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAAA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS GCA 90 bp CTTGATAAGAAGAGGCGGGGCAATGTCAGGAGGGGCAAACTGCTCTaGAAGATCCGGGAGAGTCAAAGCTCTTTCCAGCCTGCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LDKKRRGNVRRGKLL*KIRESQSSFQPAVL
Trigger: CAGAACCGCAGGCTGGAAAGAGCTTTGACTCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGACATTGCCCCGCCTCTTCTTATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520675.1
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCCGTAATTCTGCCAGGTaGCTGGAGCTCTGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIRNSAR*LELCVL
Trigger: CAGAACACAGAGCTCCAGCAACCTGGCAGAATTACG...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCCTCCCACCACCCCACTaGATACATCCCTTCACTACA +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRILPPPH*IHPFTT
Trigger: TGTAGTGAAGGGATGTATCAAGTGGGGTGGTGGGAG...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS TCA 90 bp CAGACTGGAGAGGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTaGACTTCAGGAGAAGGATCAAAGAGTAAGCGCTTCATCGCCTCT +
Preference number: 5 (lower is better)
Translates to: QTGEEPFAFQRPQGG*TSGEGSKSKRFIAS
Trigger: AGAGGCGATGAAGCGCTTACTCTTTGATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCCTCTCCAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS TCA 90 bp GCCCAATCCTTTCTGACACTTTTGTCACACTGTCCATCTGTCGTCTaGTTGTACCGTGGCACTCCACACACGAGCTTCACCTACCCCGCC +
Preference number: 5 (lower is better)
Translates to: AQSFLTLLSHCPSVV*LYRGTPHTSFTYPA
Trigger: GGCGGGGTAGGTGAAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACGACAGATGGACAGTGTGACAAAAGTGTCAGAAAGGATTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521657.5
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTGGTTAAAGGCCTCTTaGTCCCTGCACGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLWLKAS*SLHAEI
Trigger: AATCTCTGCGTGCAGGGACAAAGAGGCCTTTAACCA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCATGGTTAAAGGCCTCTTaGTCCCTGCACGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPWLKAS*SLHAEI
Trigger: AATCTCTGCGTGCAGGGACAAAGAGGCCTTTAACCA...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS CCA 90 bp AGTCAAAGCTTGTTGTTCAACATCTGCTTCAGTTTTCGAAGAACCTaGTGCAACAGGAAGAGGCCGAGGTGGCCGGGGCTTTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SQSLLFNICFSFRRT*CNRKRPRWPGLWCG
Trigger: CCCACACCAAAGCCCCGGCCACCTCGGCCTCTTCCTGTTGCACCAGGTTCTTCGAAAACTGAAGCAGATGTTGAACAACAAGCTTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAGCTGTCCTTTTCATTaGGATTTCCTGGGATGTGCG +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLSCPFH*DFLGCA
Trigger: CGCACATCCCAGGAAATCCAAATGAAAAGGACAGCT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAAGCTGTCCTTTTCATTaGGATTTCCTGGGATGTGCG +
Preference number: 5 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPSCPFH*DFLGCA
Trigger: CGCACATCCCAGGAAATCCAAATGAAAAGGACAGCT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTTTTCTATGTATTCTTaGCTGTACCGCTCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPFSMYS*LYRSWV
Trigger: GACCCAAGAGCGGTACAGCAAAGAATACATAGAAAA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGTTGCCGAACACCTTTTaGAGTCAACCACATCAAGTA +
Preference number: 5 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPLPNTF*SQPHQV
Trigger: TACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAA...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTCTTCAGTGTTTTCATaGCCCAACCACTCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGSSVFS*PNHSFN
Trigger: GTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCCTCAGCACTCATGTTaGCAAATCTGCTACCATGCA +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLPQHSC*QICYHA
Trigger: TGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGG...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCCGGGAGAGTCAAAGCTaGTTGTTCAACATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIRESQS*LFNICF
Trigger: GAAGCAGATGTTGAACAACAAGCTTTGACTCTCCCG...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACGGGAGAGTCAAAGCTaGTTGTTCAACATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPRESQS*LFNICF
Trigger: GAAGCAGATGTTGAACAACAAGCTTTGACTCTCCCG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGTGCCCGATCCGTGCTaGCCGTCTCCGACAGCTAGC +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTVPDPC*PSPTAS
Trigger: GCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCAC...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCGTAATCAAAAAGGCATaGGGCAGAACAGGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIVIKKA*GRTGLV
Trigger: CACCAGACCTGTTCTGCCCAATGCCTTTTTGATTAC...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTACTGTGGATCTGTTTaGGCTGAAAGGTGTACTGGA +
Preference number: 5 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGYCGSV*AERCTG
Trigger: TCCAGTACACCTTTCAGCCAAAACAGATCCACAGTA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp AGCAGGCATAGCAGCCCTGTTTACTGCTCTCCCGGACAAGAAAAGTaGCATCTCGCTTCCCTCGCAACAGGTTTTCAGCTTTGTTTCGGT +
Preference number: 5 (lower is better)
Translates to: SRHSSPVYCSPGQEK*HLASLATGFQLCFG
Trigger: ACCGAAACAAAGCTGAAAACCTGTTGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCTATGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS CCA 90 bp AGAGGACAAAGGACCACTCTCCAAAGGTTTAAGAGGAGAGGTGACTaGCCATACGGCTGTCCATCTGTCCTCCATCAATGGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: RGQRTTLQRFKRRGD*PYGCPSVLHQWCDR
Trigger: TCGGTCACACCATTGATGGAGGACAGATGGACAGCCGTATGGCCAGTCACCTCTCCTCTTAAACCTTTGGAGAGTGGTCCTTTGTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTTTTTCTATGTATTCTTaGCTGTACCGCTCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAFSMYS*LYRSWV
Trigger: GACCCAAGAGCGGTACAGCAAAGAATACATAGAAAA...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCTTGCCGAACACCTTTTaGAGTCAACCACATCAAGTA +
Preference number: 5 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGLPNTF*SQPHQV
Trigger: TACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAA...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTCTCGTTCAACTTCTTTaGCCGAACACCTTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: RLDQTFSGQGSSASLSSALVQLL*PNTFLS
Trigger: ACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACGAG...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTCTTCAGTGTTTTCATaGCCCAACCACTCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRISSVFS*PNHSFN
Trigger: GTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAACTGCCGGCTCCTCATaGAGAAGCCAACTGGATTTC +
Preference number: 5 (lower is better)
Translates to: LSSALQSPNFQLVKLQKATAGSS*RSQLDF
Trigger: GAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAGT...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTTCAACGGTTTCCCTTaGAAATGCCTGTATCCGACA +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLFNGFP*KCLYPT
Trigger: TGTCGGATACAGGCATTTCAAAGGGAAACCGTTGAA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR CAA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTTTGAATAAAGCAGCTTaGAAGCTTATCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RLDQTFSGQGSSASLSSALNKAA*KLIRHC
Trigger: GCAGTGCCTGATAAGCTTCAAAGCTGCTTTATTCAA...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTAAAGTGCATATAACCTaGCCTCCCCCTCCCACCACC +
Preference number: 5 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSKVHIT*PPPPTT
Trigger: GGTGGTGGGAGGGGGAGGCAAGGTTATATGCACTTT...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp CCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGAGAAGCAACTTCACTTaGCAGTTATTCACTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PGWTKPSQARVLLPLSPPRSNFT*QLFTSL
Trigger: CAGAGAAGTGAATAACTGCAAAGTGAAGTTGCTTCT...CGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTCAGTAGAGTCAAGTTaGAGGGCTAACAGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLSVESS*RANSLA
Trigger: AGCAAGACTGTTAGCCCTCAAACTTGACTCTACTGA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp CTTGATAAGAAGAGGCGGGGCAATGTCAGGAGGGGCAAACTGCTCTaGAAGATCCGGGAGAGTCAAAGCTTGTTGTTCAACATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LDKKRRGNVRRGKLL*KIRESQSLLFNICF
Trigger: GAAGCAGATGTTGAACAACAAGCTTTGACTCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGACATTGCCCCGCCTCTTCTTATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 90 bp ACGAGCTTGATAAGAAGAGGCGGGGCAATGTCAGGAGGGGCAAACTaGTCTGCAAGATCCGGGAGAGTCAAAGCTTGTTGTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: TSLIRRGGAMSGGAN*SARSGRVKACCSTS
Trigger: AGATGTTGAACAACAAGCTTTGACTCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGACATTGCCCCGCCTCTTCTTATCAAGCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp CAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAACATCCAGGCTAAACCAGGCGACAACTTGATCCTGTaGGTATTTGGATACTGGATA +
Preference number: 5 (lower is better)
Translates to: QCDVSGSTVHSNIQAKPGDNLIL*VFGYWI
Trigger: TATCCAGTATCCAAATACCAACAGGATCAAGTTGTC...GCCTGGTTTAGCCTGGATGTTGCTGTGCACGGTGGACCCAGACACATCGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTTTGCTGTACCGCTCTaGGGTCTGGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSFAVPL*GLALFF
Trigger: GAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAAA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCTTTTCTATGTATTCTTaGCTGTACCGCTCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLFSMYS*LYRSWV
Trigger: GACCCAAGAGCGGTACAGCAAAGAATACATAGAAAA...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCACTCGTTCAACTTCTTTaGCCGAACACCTTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPLVQLL*PNTFLS
Trigger: ACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACGAG...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCGAGAGTCAAAGCTTGTaGTTCAACATCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLESQSL*FNICFS
Trigger: ACTGAAGCAGATGTTGAACAACAAGCTTTGACTCTC...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp AGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCGCTGTGTTCTGTATAGAGTaGAACATTCCAGACCTTTCT +
Preference number: 5 (lower is better)
Translates to: RLDQTFSGQGSSASLSSAVFCIE*NIPDLS
Trigger: AGAAAGGTCTGGAATGTTCAACTCTATACAGAACAC...AGCGGAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS TCA 90 bp CACTTTGAATCCAGGCTGACTCTCACAGCGAGGCCCAATCCTTTCTaGCACTTTTGTCACACTGTCCATCTGTCGTCTGATTGTACCGTG +
Preference number: 5 (lower is better)
Translates to: HFESRLTLTARPNPF*HFCHTVHLSSDCTV
Trigger: CACGGTACAATCAGACGACAGATGGACAGTGTGACAAAAGTGTCAGAAAGGATTGGGCCTCGCTGTGAGAGTCAGCCTGGATTCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517643.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 90 bp ACAGCGCTCTGTACTGGTACCCCTCAGCACTCATGTTTGCAAATCTaGTACCATGCAACAGTTGAGCCTGGTTGTACAGAGCAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: TALCTGTPQHSCLQI*YHATVEPGCTEQSD
Trigger: ATCAGACTGCTCTGTACAACCAGGCTCAACTGTTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGGGGTACCAGTACAGAGCGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCAACAGTATTGTACATTaGTGCAAGAGTTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLNSIVH*CKSFLG
Trigger: GCCAAGGAAACTCTTGCACAAATGTACAATACTGTT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336483.9
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAATGGCTTCCACGAGCTaGATAAGAAGAGGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAMASTS*IRRGGA
Trigger: TGCCCCGCCTCTTCTTATCAAGCTCGTGGAAGCCAT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCGCAAACACATGCTTTTaGCCTTTTCACATGGTTATG +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIANTCF*PFHMVM
Trigger: CATAACCATGTGAAAAGGCAAAAAGCATGTGTTTGC...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp CCGTGCACAGCAACATCCAGGCTAAACCAGGCTGGACCAAACCTTCTCAGGCCAATCTTCTTTGACAACTaGATCCTGTTGGTATTTGGA +
Preference number: 5 (lower is better)
Translates to: PCTATSRLNQAGPNLLRPIFFDN*ILLVFG
Trigger: TCCAAATACCAACAGGATCAAGTTGTCAAAGAAGAT...TGGCCTGAGAAGGTTTGGTCCAGCCTGGTTTAGCCTGGATGTTGCTGTGCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCATGCTGTTCATACGTTaGTCAATTTCTCGATACTCA +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIMLFIR*SISRYS
Trigger: TGAGTATCGAGAAATTGACAAACGTATGAACAGCAT...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCATGCTGTTCATACGTTaGTCAATTTCTCGATACTCA +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLMLFIR*SISRYS
Trigger: TGAGTATCGAGAAATTGACAAACGTATGAACAGCAT...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AACCAGGCTGGACCAAACCTTCTCAGGCCAGGGTTCTTCTGCCTCTCTCTCCTCCATTTCTTTTTCTCTTaGTGTTGTATGTGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: NQAGPNLLRPGFFCLSLLHFFFS*CCMWLW
Trigger: CCACAACCACATACAACACAAAGAGAAAAAGAAATG...GAGGAGAGAGAGGCAGAAGAACCCTGGCCTGAGAAGGTTTGGTCCAGCCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GGCAAAGTTACAACTGACCGTGACATCCTCCCTCTCGTCAAAAGACCAACTTTACGTAATTCTGCCAGGTaGCTGGAGCTCTGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: GKVTTDRDILPLVKRPTLRNSAR*LELCVL
Trigger: CAGAACACAGAGCTCCAGCAACCTGGCAGAATTACG...TAAAGTTGGTCTTTTGACGAGAGGGAGGATGTCACGGTCAGTTGTAACTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCTTTCAGAGAGTACTCTaGCATTCAACAGATTTTTGC +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIFQRVL*HSTDFC
Trigger: GCAAAAATCTGTTGAATGCAAGAGTACTCTCTGAAA...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GGAGCCCTTTGCTTTCCAGAGGCCTCAGGGTGGCTGAACTTCAGGAGAAGGATCGTACTAGACGTTCGCTaGTTATGTACTTTATGTACT +
Preference number: 5 (lower is better)
Translates to: GALCFPEASGWLNFRRRIVLDVR*LCTLCT
Trigger: AGTACATAAAGTACATAACAAGCGAACGTCTAGTAC...GATCCTTCTCCTGAAGTTCAGCCACCCTGAGGCCTCTGGAAAGCAAAGGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS TCA 90 bp CACTGGCTTCCTTTTCAGCAACTTGTCAACACTTTGAATCCAGGCTaGCTCTCACAGCGAGGCCCAATCCTTTCTGACACTTTTGTCACA +
Preference number: 5 (lower is better)
Translates to: HWLPFQQLVNTLNPG*LSQRGPILSDTFVT
Trigger: TGTGACAAAAGTGTCAGAAAGGATTGGGCCTCGCTGTGAGAGTCAGCCTGGATTCAAAGTGTTGACAAGTTGCTGAAAAGGAAGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517643.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 90 bp TGCCATCTCGCTTCCCTCGCAACAGGTTTTCAGCTTTGTTTCGGTTaGTGCTTCCAACATTCCATGTCTTCTCATCATGATGGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: CHLASLATGFQLCFG*CFQHSMSSHHDGAN
Trigger: ATTTGCCCCATCATGATGAGAAGACATGGAATGTTGGAAGCAGCAACCGAAACAAAGCTGAAAACCTGTTGCGAGGGAAGCGAGATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS GCA 90 bp ATAATCATACAGCGCTCTGTACTGGTACCCCTCAGCACTCATGTTTaGAAATCTGCTACCATGCAACAGTTGAGCCTGGTTGTACAGAGC +
Preference number: 5 (lower is better)
Translates to: IIIQRSVLVPLSTHV*KSATMQQLSLVVQS
Trigger: GCTCTGTACAACCAGGCTCAACTGTTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGGGGTACCAGTACAGAGCGCTGTATGATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS CCA 90 bp TCTGACACTTTTGTCACACTGTCCATCTGTCGTCTGATTGTACCGTaGCACTCCACACACGAGCTTCACCTGCATATAAAAGCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SDTFVTLSICRLIVP*HSTHELHLHIKAEE
Trigger: CTCTTCAGCTTTTATATGCAGGTGAAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACGACAGATGGACAGTGTGACAAAAGTGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517643.1
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATTTGCTGTACCGCTCTaGGGTCTGGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTFAVPL*GLALFF
Trigger: GAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAAA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTCTTCAGTGTTTTCATaGCCCAACCACTCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSSSVFS*PNHSFN
Trigger: GTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTCTTCAGTGTTTTCATaGCCCAACCACTCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFSSVFS*PNHSFN
Trigger: GTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCAGAGAGTCAAAGCTTGTaGTTCAACATCTGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAESQSL*FNICFS
Trigger: ACTGAAGCAGATGTTGAACAACAAGCTTTGACTCTC...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTATGGCTTCCACGAGCTaGATAAGAAGAGGCGGGGCA +
Preference number: 5 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFMASTS*IRRGGA
Trigger: TGCCCCGCCTCTTCTTATCAAGCTCGTGGAAGCCAT...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAGAGAAGGACTGCCACTaGGATTCCTGCAATGACCAT +
Preference number: 5 (lower is better)
Translates to: SALQSPNFQLVKLQKALTEKDCH*DSCNDH
Trigger: ATGGTCATTGCAGGAATCCAAGTGGCAGTCCTTCTC...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp CATCTCGCTTCCCTCGCAACAGGTTTTCAGCTTTGTTTCGGTTGCTaGTTCCAACATTCCATGTCTTCTCATCATGATGGGGCAAATCTT +
Preference number: 5 (lower is better)
Translates to: HLASLATGFQLCFGC*FQHSMSSHHDGANL
Trigger: AAGATTTGCCCCATCATGATGAGAAGACATGGAATGTTGGAAGCAGCAACCGAAACAAAGCTGAAAACCTGTTGCGAGGGAAGCGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS GCA 90 bp CGGAGGGTGTATCACAATCAAGAAGCTGTCGTAATTCTGCCAGGTTaGTGGAGCTCTGTGTTCTGTATAGAGTTGAACATTCCAGACCTT +
Preference number: 5 (lower is better)
Translates to: RRVYHNQEAVVILPG*WSSVFCIELNIPDL
Trigger: AAGGTCTGGAATGTTCAACTCTATACAGAACACAGAGCTCCAGCAACCTGGCAGAATTACGACAGCTTCTTGATTGTGATACACCCTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520675.1
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAAGCTGTCCTTTTCATTaGGATTTCCTGGGATGTGCG +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTASCPFH*DFLGCA
Trigger: CGCACATCCCAGGAAATCCAAATGAAAAGGACAGCT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCTGTATCTCGAAGTTTTTCAAGCTGTCCTTTTCATTaGGATTTCCTGGGATGTGCG +
Preference number: 5 (lower is better)
Translates to: VDASRTKKVPSAVSRSFSSCPFH*DFLGCA
Trigger: CGCACATCCCAGGAAATCCAAATGAAAAGGACAGCT...TGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTCTCGTTCAACTTCTTTaGCCGAACACCTTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFLVQLL*PNTFLS
Trigger: ACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACGAG...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATGGTTAAAGGCCTCTTaGTCCCTGCACGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTWLKAS*SLHAEI
Trigger: AATCTCTGCGTGCAGGGACAAAGAGGCCTTTAACCA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTTTAGGAGGCAGTGTTaGCAGGTTATGCATTTCAAC +
Preference number: 5 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSFRRQC*QVMHFN
Trigger: GTTGAAATGCATAACCTGCAAACACTGCCTCCTAAA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS-3UTR CAA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTTGAATAAAGCAGCTTaGAAGCTTATCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSLNKAA*KLIRHC
Trigger: GCAGTGCCTGATAAGCTTCAAAGCTGCTTTATTCAA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAGTCCCATGTGAGACATaGTGCTTTAAACTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAVPCET*CFKLPL
Trigger: AAGGGGCAGTTTAAAGCACAATGTCTCACATGGGAC...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTGGCATTTTGGAACTTaGTCCCATGTGAGACATTGT +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFWHFGT*SHVRHC
Trigger: ACAATGTCTCACATGGGACAAAGTTCCAAAATGCCA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTTTGTTATTCATACCGTaGTTGGCTACAGTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSLLFIP*LATVVG
Trigger: ACCTACTACTGTAGCCAACAACGGTATGAATAACAA...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTTGTTATTCATACCGTaGTTGGCTACAGTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFLLFIP*LATVVG
Trigger: ACCTACTACTGTAGCCAACAACGGTATGAATAACAA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTGACAACTTGATCCTGTaGGTATTTGGATACTGGATA +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFDNLIL*VFGYWI
Trigger: TATCCAGTATCCAAATACCAACAGGATCAAGTTGTC...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp ATCCAAAGTGGCCGGCTAGCAAAGTATCTAAAACGACAAATGCGGTGGGCAAGCGACAACTTGATCCTGTaGGTATTTGGATACTGGATA +
Preference number: 5 (lower is better)
Translates to: IQSGRLAKYLKRQMRWASDNLIL*VFGYWI
Trigger: TATCCAGTATCCAAATACCAACAGGATCAAGTTGTC...GCTTGCCCACCGCATTTGTCGTTTTAGATACTTTGCTAGCCGGCCACTTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAGCTGTCCTTTTCATTaGGATTTCCTGGGATGTGCG +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTSCPFH*DFLGCA
Trigger: CGCACATCCCAGGAAATCCAAATGAAAAGGACAGCT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTTTGCTGTACCGCTCTaGGGTCTGGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VQLLLPNTFLSQPHQVLVFAVPL*GLALFF
Trigger: GAAGAACAGTGCCAGACCCAAGAGCGGTACAGCAAA...GACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACACAACCACATCAAGTATaGGTCTCTCGTCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: SALQSPNFQLVKLQKALTQPHQV*VSRLSQ
Trigger: CTGAGAAAGACGAGAGACCAATACTTGATGTGGTTG...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCACAACCACATCAAGTATaGGTCTCTCGTCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAQPHQV*VSRLSQ
Trigger: CTGAGAAAGACGAGAGACCAATACTTGATGTGGTTG...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp ACTTTAAAGCAGAGACGCAGACTAAAACCAGGGAAATCGTCAGTTGTCTGGCGACAACCACATCAAGTATaGGTCTCTCGTCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: TLKQRRRLKPGKSSVVWRQPHQV*VSRLSQ
Trigger: CTGAGAAAGACGAGAGACCAATACTTGATGTGGTTG...TCGCCAGACAACTGACGATTTCCCTGGTTTTAGTCTGCGTCTCTGCTTTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCAACCACATCAAGTATaGGTCTCTCGTCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEEQPHQV*VSRLSQ
Trigger: CTGAGAAAGACGAGAGACCAATACTTGATGTGGTTG...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTCTTCAGTGTTTTCATaGCCCAACCACTCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEESSVFS*PNHSFN
Trigger: GTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CTCTCCTCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCACATTTCTTTTTCTCTTaGTGTTGTATGTGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LSSALQSPNFQLVKLQKAHFFFS*CCMWLW
Trigger: CCACAACCACATACAACACAAAGAGAAAAAGAAATG...TGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGAGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACCTCAGCACTCATGTTaGCAAATCTGCTACCATGCA +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTPQHSC*QICYHA
Trigger: TGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS CCA 90 bp AGGGTGTATCACAATCAAGAAGCTGTCGTAATTCTGCCAGGTTGCTaGAGCTCTGTGTTCTGTATAGAGTTGAACATTCCAGACCTTTCT +
Preference number: 5 (lower is better)
Translates to: RVYHNQEAVVILPGC*SSVFCIELNIPDLS
Trigger: AGAAAGGTCTGGAATGTTCAACTCTATACAGAACACAGAGCTCCAGCAACCTGGCAGAATTACGACAGCTTCTTGATTGTGATACACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520675.1
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTTATTCATACCGTTGTaGGCTACAGTAGTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFLFIPL*ATVVGF
Trigger: AAAACCTACTACTGTAGCCAACAACGGTATGAATAA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTATCTTCTTTGACAACTaGATCCTGTTGGTATTTGGA +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFIFFDN*ILLVFG
Trigger: TCCAAATACCAACAGGATCAAGTTGTCAAAGAAGAT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp AAGCACTCCAGCTTAGGAACGTGTGGTCATCATACAGCCTTAGGCTGCATGTCTATGCTGTTCATACGTTaGTCAATTTCTCGATACTCA +
Preference number: 5 (lower is better)
Translates to: KHSSLGTCGHHTALGCMSMLFIR*SISRYS
Trigger: TGAGTATCGAGAAATTGACAAACGTATGAACAGCAT...AGACATGCAGCCTAAGGCTGTATGATGACCACACGTTCCTAAGCTGGAGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTATGCTGTTCATACGTTaGTCAATTTCTCGATACTCA +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFMLFIR*SISRYS
Trigger: TGAGTATCGAGAAATTGACAAACGTATGAACAGCAT...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATCCTTTCTGACACTTTaGTCACACTGTCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTSFLTL*SHCPSV
Trigger: GACAGATGGACAGTGTGACAAAAGTGTCAGAAAGGA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTTGAATAAAGCAGCTTaGAAGCTTATCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEELNKAA*KLIRHC
Trigger: GCAGTGCCTGATAAGCTTCAAAGCTGCTTTATTCAA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGCCCTTTTGCGTTTCAACTAACTaGGATACCATACATAGCAAA +
Preference number: 5 (lower is better)
Translates to: DGFVSAAQFTDQTGEEPFCVSTN*DTIHSK
Trigger: TTTGCTATGTATGGTATCCAAGTTAGTTGAAACGCA...AAAGGGCTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATTGTTATTCATACCGTaGTTGGCTACAGTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTALLFIP*LATVVG
Trigger: ACCTACTACTGTAGCCAACAACGGTATGAATAACAA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAGACAACTTGATCCTGTaGGTATTTGGATACTGGATA +
Preference number: 5 (lower is better)
Translates to: SALQSPNFQLVKLQKALTDNLIL*VFGYWI
Trigger: TATCCAGTATCCAAATACCAACAGGATCAAGTTGTC...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAGACAACTTGATCCTGTaGGTATTTGGATACTGGATA +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTADNLIL*VFGYWI
Trigger: TATCCAGTATCCAAATACCAACAGGATCAAGTTGTC...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATTTTCTATGTATTCTTaGCTGTACCGCTCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTFSMYS*LYRSWV
Trigger: GACCCAAGAGCGGTACAGCAAAGAATACATAGAAAA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp CTCGTCTTTCTCAGCTGGATAAGGTCTGGTTTAATGCTGTTCATACGTTTGTCACAACCACATCAAGTATaGGTCTCTCGTCTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LVFLSWIRSGLMLFIRLSQPHQV*VSRLSQ
Trigger: CTGAGAAAGACGAGAGACCAATACTTGATGTGGTTG...TGACAAACGTATGAACAGCATTAAACCAGACCTTATCCAGCTGAGAAAGACGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATTGCCGAACACCTTTTaGAGTCAACCACATCAAGTA +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTLPNTF*SQPHQV
Trigger: TACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTTCCTTTCTGACACTTTaGTCACACTGTCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFSFLTL*SHCPSV
Trigger: GACAGATGGACAGTGTGACAAAAGTGTCAGAAAGGA...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAGTGTTCTGTATAGAGTaGAACATTCCAGACCTTTCT +
Preference number: 5 (lower is better)
Translates to: SALQSPNFQLVKLQKALTVFCIE*NIPDLS
Trigger: AGAAAGGTCTGGAATGTTCAACTCTATACAGAACAC...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCCGTTCAGACAATATaGTTAGGACTGTCTGATGAA +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTAVQTI*LGLSDE
Trigger: TTCATCAGACAGTCCTAACAATATTGTCTGAACGGC...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTTATATGACAAAGCAATaGGTTCCCCACAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFYMTKQ*VPHSDS
Trigger: GCTGTCACTGTGGGGAACCAATTGCTTTGTCATATA...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp ATAATCACCATGCATTTTAGTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCAACAGTATTGTACATTaGTGCAAGAGTTTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: IITMHFSRRISYQKGPVCNSIVH*CKSFLG
Trigger: GCCAAGGAAACTCTTGCACAAATGTACAATACTGTT...GCAGACGGGACCTTTTTGGTACGAGATGCGTCTACTAAAATGCATGGTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp AAGAAAGATGGCTTCGTTTCTGCAGCTCAATTCACAGATCAGACTGGAGAGGAGTTATTCATACCGTTGTaGGCTACAGTAGTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: KKDGFVSAAQFTDQTGEELFIPL*ATVVGF
Trigger: AAAACCTACTACTGTAGCCAACAACGGTATGAATAA...CTCCTCTCCAGTCTGATCTGTGAATTGAGCTGCAGAAACGAAGCCATCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTTTGTTATTCATACCGTaGTTGGCTACAGTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: VLNKGERCSRNPKTNLALLLFIP*LATVVG
Trigger: ACCTACTACTGTAGCCAACAACGGTATGAATAACAA...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCAATCTTCTTTGACAACTaGATCCTGTTGGTATTTGGA +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAIFFDN*ILLVFG
Trigger: TCCAAATACCAACAGGATCAAGTTGTCAAAGAAGAT...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp TCCGCTCTCCAGAGTCCCAACTTTCAGCTGGTAAAGCTTCAGAAAGCATTAACAATGCTGTTCATACGTTaGTCAATTTCTCGATACTCA +
Preference number: 5 (lower is better)
Translates to: SALQSPNFQLVKLQKALTMLFIR*SISRYS
Trigger: TGAGTATCGAGAAATTGACAAACGTATGAACAGCAT...TGTTAATGCTTTCTGAAGCTTTACCAGCTGAAAGTTGGGACTCTGGAGAGCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GTAGACGCATCTCGTACCAAAAAGGTCCCGTCTGCTGTATCTCGAAGTTTTTCAATGCTGTTCATACGTTaGTCAATTTCTCGATACTCA +
Preference number: 5 (lower is better)
Translates to: VDASRTKKVPSAVSRSFSMLFIR*SISRYS
Trigger: TGAGTATCGAGAAATTGACAAACGTATGAACAGCAT...TGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp ATCAAGTATTGGTCTCTCGTCTTTCTCAGCTGGATAAGGTCTGGTTTAATGCTGTTGCCGAACACCTTTTaGAGTCAACCACATCAAGTA +
Preference number: 5 (lower is better)
Translates to: IKYWSLVFLSWIRSGLMLLPNTF*SQPHQV
Trigger: TACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAA...CAGCATTAAACCAGACCTTATCCAGCTGAGAAAGACGAGAGACCAATACTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp TTCATTGCCCAACCACTCGTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACTCGTTCAACTTCTTTaGCCGAACACCTTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: FIAQPLVQLLLPNTFLSQLVQLL*PNTFLS
Trigger: ACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACGAG...TTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp TTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAGCATTTCAGAGAGTACTCTaGCATTCAACAGATTTTTGC +
Preference number: 5 (lower is better)
Translates to: LQNEIIHSAMCLGPPCTAFQRVL*HSTDFC
Trigger: GCAAAAATCTGTTGAATGCAAGAGTACTCTCTGAAA...TGCTGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACATTATTCATACCGTTGTaGGCTACAGTAGTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTLFIPL*ATVVGF
Trigger: AAAACCTACTACTGTAGCCAACAACGGTATGAATAA...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
CDS-3UTR CAA 90 bp ATCAAGTATTGGTCTCTCGTCTTTCTCAGCTGGATAAGGTCTGGTTTAATGCTGGACAACTTGATCCTGTaGGTATTTGGATACTGGATA +
Preference number: 5 (lower is better)
Translates to: IKYWSLVFLSWIRSGLMLDNLIL*VFGYWI
Trigger: TATCCAGTATCCAAATACCAACAGGATCAAGTTGTC...CAGCATTAAACCAGACCTTATCCAGCTGAGAAAGACGAGAGACCAATACTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAATCTTCTTTGACAACTaGATCCTGTTGGTATTTGGA +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTIFFDN*ILLVFG
Trigger: TCCAAATACCAACAGGATCAAGTTGTCAAAGAAGAT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GTTCAACTTCTTTTGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTTTTCTATGTATTCTTaGCTGTACCGCTCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: VQLLLPNTFLSQPHQVLVFSMYS*LYRSWV
Trigger: GACCCAAGAGCGGTACAGCAAAGAATACATAGAAAA...GACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517698.5
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACACATTTCTTTTTCTCTTaGTGTTGTATGTGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTHFFFS*CCMWLW
Trigger: CCACAACCACATACAACACAAAGAGAAAAAGAAATG...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS-3UTR CAA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTGTGACCATATTATGGTaGCTAATTAGTCTTTATGCC +
Preference number: 5 (lower is better)
Translates to: VLNKGERCSRNPKTNLALVTILW*LISLYA
Trigger: GGCATAAAGACTAATTAGCAACCATAATATGGTCAC...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp TTGTTACAAAATGAAATAATCCACAGTGCGATGTGTCTGGGTCCACCGTGCACAAAATACCGTATCATCTaGCAAAGAATGTTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: LLQNEIIHSAMCLGPPCTKYRII*QRMLKH
Trigger: GTGCTTCAACATTCTTTGCAAGATGATACGGTATTT...TGTGCACGGTGGACCCAGACACATCGCACTGTGGATTATTTCATTTTGTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS-3UTR CAA 90 bp GTTCTAAACAAAGGTGAGCGCTGTTCCAGGAACCCAAAAACAAACTTGGCACTTTCACATAAACACATTTaGACTCGACACACTGAAAAC +
Preference number: 5 (lower is better)
Translates to: VLNKGERCSRNPKTNLALSHKHI*TRHTEN
Trigger: GTTTTCAGTGTGTCGAGTCAAAATGTGTTTATGTGA...AAGTGCCAAGTTTGTTTTTGGGTTCCTGGAACAGCGCTCACCTTTGTTTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 90 bp ACATTTTACATGCTTTCTAAAGTACCAAGTGTTATCACTGCAAAGTaGTACACTGTTCTCATCCACTGGCAACAGAGAAAAGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: TFYMLSKVPSVITAK*YTVLIHWQQRKAAQ
Trigger: TTGTGCTGCTTTTCTCTGTTGCCAGTGGATGAGAACAGTGTAGCACTTTGCAGTGATAACACTTGGTACTTTAGAAAGCATGTAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518813.5
CDS-3UTR CAA 90 bp GGGCAGAACAGGTCTGGTGTAACTCAAGTCATATGGAATGATGAATCCTACTTTATCTTCTTTGACAACTaGATCCTGTTGGTATTTGGA +
Preference number: 5 (lower is better)
Translates to: GQNRSGVTQVIWNDESYFIFFDN*ILLVFG
Trigger: TCCAAATACCAACAGGATCAAGTTGTCAAAGAAGAT...AAAGTAGGATTCATCATTCCATATGACTTGAGTTACACCAGACCTGTTCTGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS TCA 90 bp CCGTCTGCTGTATCTCGAAGTTTTTCATTCACTTCTTCCCTGAAATaGAAACACAAAACAATGCTCATCTTAAGGTTTAGTGACCACAGA +
Preference number: 5 (lower is better)
Translates to: PSAVSRSFSFTSSLK*KHKTMLILRFSDHR
Trigger: TCTGTGGTCACTAAACCTTAAGATGAGCATTGTTTTGTGTTTTCATTTCAGGGAAGAAGTGAATGAAAAACTTCGAGATACAGCAGACGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520550.1
CDS GCA 90 bp GGCATTGTTTTCTTATTGTGTTTAAGGCAAGAATTCTTAGAGTTGTaGTTAATAGATAGAGTGCCTTCACACTCTGTTCTTAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GIVFLLCLRQEFLEL*LIDRVPSHSVLRQC
Trigger: GCACTGCCTAAGAACAGAGTGTGAAGGCACTCTATCTATTAAGCACAACTCTAAGAATTCTTGCCTTAAACACAATAAGAAAACAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523872.1
CDS TCA 90 bp ATTCATATCCATTCAAGTAAGAATAAGCATTTACCACACACAGCCTaGGCTGCTTGCTTCCACAGACAGTCAAACAATCTGTTTAATTTT +
Preference number: 5 (lower is better)
Translates to: IHIHSSKNKHLPHTA*AACFHRQSNNLFNF
Trigger: AAAATTAAACAGATTGTTTGACTGTCTGTGGAAGCAAGCAGCTCAGGCTGTGTGTGGTAAATGCTTATTCTTACTTGAATGGATATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518813.5
CDS TCA 90 bp ACAGTTGAGCCTGGTTGTACAGAGCAGTCTGATTTTACGTTTTTATaGAAAGTGAATTCAGAGAATGTGTTAGAATTCCTATTATGTGTC +
Preference number: 5 (lower is better)
Translates to: TVEPGCTEQSDFTFL*KVNSENVLEFLLCV
Trigger: GACACATAATAGGAATTCTAACACATTCTCTGAATTCACTTTTCATAAAAACGTAAAATCAGACTGCTCTGTACAACCAGGCTCAACTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp CGCAGGAGCGGGGGCGCCGCCAGGACCCTCCGGGCGTaGACAGTGGCCCAGCTCCGCTTGGCTCGGCTCGGC +
Preference number: 6 (lower is better)
Translates to: RRSGGAARTLRA*TVAQLRLARLG
Trigger: GCCGAGCCGAGCCAAGCGGAGCTGGGCCACTGTGCACGCCCGGAGGGTCCTGGCGGCGCCCCCGCTCCTGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS GCA 72 bp CCGCCCGCCGGCTTCCTTCCTCTGCGGGGCCCGCGCTaGAGCGGTGGCCTCCTGCCCGCTCGGTTCCGACCG +
Preference number: 6 (lower is better)
Translates to: PPAGFLPLRGPR*SGGLLPARFRP
Trigger: CGGTCGGAACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGGCCCCGCAGAGGAAGGAAGCCGGCGGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS CAA 90 bp GGCCTCCAGCCCGGCTGCGACCCGCCGGCCGTGCCCGATCCGTGCTaGCCGTCTCCGACAGCTAGCCTGCCGCCCTCGCCGCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GLQPGCDPPAVPDPC*PSPTASLPPSPLPL
Trigger: CAGCGGCAGCGGCGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGGGCTGGAGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp TTCCCGGCAGGCAGTGCTCGTGTCCGGCGCCGAGAGTaGGCGCAGGAGCGGGGGCGCCGCCAGGACCCTCCG +
Preference number: 6 (lower is better)
Translates to: FPAGSARVRRRE*AQERGRRQDPP
Trigger: CGGAGGGTCCTGGCGGCGCCCCCGCTCCTGCGCGCACTCTCGGCGCCGGACACGAGCACTGCCTGCCGGGAA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS GCA 72 bp CCGGCTGCGACCCGCCGGCCGTGCCCGATCCGTGCTTaGCGTCTCCGACAGCTAGCCTGCCGCCCTCGCCGC +
Preference number: 6 (lower is better)
Translates to: PAATRRPCPIRA*RLRQLACRPRR
Trigger: GCGGCGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS CCA 72 bp GGACCCTCCGGGCGTGCACAGTGGCCCAGCTCCGCTTaGCTCGGCTCGGCTCGTCCCTCCGCCCCACGCCCC +
Preference number: 6 (lower is better)
Translates to: GPSGRAQWPSSA*LGSARPSAPRP
Trigger: GGGGCGTGGGGCGGAGGGACGAGCCGAGCCGAGCCAAGCGGAGCTGGGCCACTGTGCACGCCCGGAGGGTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS CAA 72 bp CCCGGCTGCGACCCGCCGGCCGTGCCCGATCCGTGCTaGCCGTCTCCGACAGCTAGCCTGCCGCCCTCGCCG +
Preference number: 6 (lower is better)
Translates to: PGCDPPAVPDPC*PSPTASLPPSP
Trigger: CGGCGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp CAGCCCGGCTGCGACCCGCCGGCCGTGCCCGATCCGTaGTTGCCGTCTCCGACAGCTAGCCTGCCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: QPGCDPPAVPDP*LPSPTASLPPS
Trigger: CGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGGGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp CGACCGGCCTCCAGCCCGGCTGCGACCCGCCGGCCGTaGCCGATCCGTGCTTGCCGTCTCCGACAGCTAGCC +
Preference number: 6 (lower is better)
Translates to: RPASSPAATRRP*PIRACRLRQLA
Trigger: GGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCACGGCCGGCGGGTCGCAGCCGGGCTGGAGGCCGGTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS CCA 72 bp CGGCTTCCTTCCTCTGCGGGGCCCGCGCTGCAGCGGTaGCCTCCTGCCCGCTCGGTTCCGACCGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: RLPSSAGPALQR*PPARSVPTGLQ
Trigger: CTGGAGGCCGGTCGGAACCGAGCGGGCAGGAGGCCACCGCTGCAGCGCGGGCCCCGCAGAGGAAGGAAGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521381.6
ENST00000521657.5
CDS CAA 72 bp AGGACCCTCCGGGCGTGCACAGTGGCCCAGCTCCGCTaGGCTCGGCTCGGCTCGTCCCTCCGCCCCACGCCC +
Preference number: 6 (lower is better)
Translates to: RTLRACTVAQLR*ARLGSSLRPTP
Trigger: GGGCGTGGGGCGGAGGGACGAGCCGAGCCGAGCCAAGCGGAGCTGGGCCACTGTGCACGCCCGGAGGGTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS GCA 72 bp CCCGCCCGGCAGTGCGTCCGGGCCACCGCCGCTCACTaGCGGCTCCTCATTGAGAAGCCAACTGGATTTCGC +
Preference number: 6 (lower is better)
Translates to: PARQCVRATAAH*RLLIEKPTGFR
Trigger: GCGAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGCCCGGACGCACTGCCGGGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS GCA 72 bp TGCCCGATCCGTGCTTGCCGTCTCCGACAGCTAGCCTaGCGCCCTCGCCGCTGCCGCTGCTTCCTCCAACTC +
Preference number: 6 (lower is better)
Translates to: CPIRACRLRQLA*RPRRCRCFLQL
Trigger: GAGTTGGAGGAAGCAGCGGCAGCGGCGAGGGCGGCAGGCTAGCTGTCGGAGACGGCAAGCACGGATCGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS CAA 72 bp GCGTCCGGGCCACCGCCGCTCACTGCCGGCTCCTCATaGAGAAGCCAACTGGATTTCGCTACTGTATCGGGG +
Preference number: 6 (lower is better)
Translates to: ASGPPPLTAGSS*RSQLDFATVSG
Trigger: CCCCGATACAGTAGCGAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGCCCGGACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS CAA 90 bp CCCGGCAGTGCGTCCGGGCCACCGCCGCTCACTGCCGGCTCCTCATaGAGAAGCCAACTGGATTTCGCTACTGTATCGGGGAGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: PGSASGPPPLTAGSS*RSQLDFATVSGRKG
Trigger: TCCTTTCCTCCCCGATACAGTAGCGAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGCCCGGACGCACTGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS TCA 72 bp CGTCCGGGCCACCGCCGCTCACTGCCGGCTCCTCATTaGGAAGCCAACTGGATTTCGCTACTGTATCGGGGA +
Preference number: 6 (lower is better)
Translates to: RPGHRRSLPAPH*EANWISLLYRG
Trigger: TCCCCGATACAGTAGCGAAATCCAGTTGGCTTCTCAATGAGGAGCCGGCAGTGAGCGGCGGTGGCCCGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS CCA 72 bp TTTGTCACACTGTCCATCTGTCGTCTGATTGTACCGTaGCACTCCACACACGAGCTTCACCCCGCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: FVTLSICRLIVP*HSTHELHPARR
Trigger: CCGGCGGGCGGGGTGAAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACGACAGATGGACAGTGTGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521381.6
CDS GCA 72 bp GCTGAAGAGGCAAGCAGTGACAATACCCAGCAGTTCTaGAAGGCAGGGAGCCTCCTCCACTGGCCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: AEEASSDNTQQF*KAGSLLHWPFQ
Trigger: TTGGAAAGGCCAGTGGAGGAGGCTCCCTGCCTTGCAGAACTGCTGGGTATTGTCACTGCTTGCCTCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517643.1
CDS GCA 72 bp CCACCACTACAGAGCAGGCATAGCAGCCCTGTTTACTaGTCTCCCGGACAAGAAAAGTGCCATCTCGCTTCC +
Preference number: 6 (lower is better)
Translates to: PPLQSRHSSPVY*SPGQEKCHLAS
Trigger: GGAAGCGAGATGGCACTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCTATGCCTGCTCTGTAGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS GCA 72 bp AAGAGGCGGGGCAATGTCAGGAGGGGCAAACTGCTCTaGAAGATCCGGGAGAGTCAAAGCTTGTTGTTCAAC +
Preference number: 6 (lower is better)
Translates to: KRRGNVRRGKLL*KIRESQSLLFN
Trigger: GTTGAACAACAAGCTTTGACTCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGACATTGCCCCGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp AGCAGCCCTGTTTACTGCTCTCCCGGACAAGAAAAGTaGCATCTCGCTTCCCTCGCAACAGGTTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: SSPVYCSPGQEK*HLASLATGFQL
Trigger: AAGCTGAAAACCTGTTGCGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS GCA 72 bp ATAAGAAGAGGCGGGGCAATGTCAGGAGGGGCAAACTaGTCTGCAAGATCCGGGAGAGTCAAAGCTTGTTGT +
Preference number: 6 (lower is better)
Translates to: IRRGGAMSGGAN*SARSGRVKACC
Trigger: ACAACAAGCTTTGACTCTCCCGGATCTTGCAGAGCAGTTTGCCCCTCCTGACATTGCCCCGCCTCTTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp CAGCGCTCTGTACTGGTACCCCTCAGCACTCATGTTTaGAAATCTGCTACCATGCAACAGTTGAGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: QRSVLVPLSTHV*KSATMQQLSLV
Trigger: AACCAGGCTCAACTGTTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGGGGTACCAGTACAGAGCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS CAA 72 bp ACAGCGCTCTGTACTGGTACCCCTCAGCACTCATGTTaGCAAATCTGCTACCATGCAACAGTTGAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: TALCTGTPQHSC*QICYHATVEPG
Trigger: ACCAGGCTCAACTGTTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGGGGTACCAGTACAGAGCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS TCA 72 bp TTTCTGACACTTTTGTCACACTGTCCATCTGTCGTCTaGTTGTACCGTGGCACTCCACACACGAGCTTCACC +
Preference number: 6 (lower is better)
Translates to: FLTLLSHCPSVV*LYRGTPHTSFT
Trigger: GGTGAAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACGACAGATGGACAGTGTGACAAAAGTGTCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517643.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp TGTACTGGTACCCCTCAGCACTCATGTTTGCAAATCTaGTACCATGCAACAGTTGAGCCTGGTTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: CTGTPQHSCLQI*YHATVEPGCTE
Trigger: CTCTGTACAACCAGGCTCAACTGTTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGGGGTACCAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS CAA 90 bp TATAATCATACAGCGCTCTGTACTGGTACCCCTCAGCACTCATGTTaGCAAATCTGCTACCATGCAACAGTTGAGCCTGGTTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: YNHTALCTGTPQHSC*QICYHATVEPGCTE
Trigger: CTCTGTACAACCAGGCTCAACTGTTGCATGGTAGCAGATTTGCAAACATGAGTGCTGAGGGGTACCAGTACAGAGCGCTGTATGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS CAA 90 bp ACGGAGGGTGTATCACAATCAAGAAGCTGTCGTAATTCTGCCAGGTaGCTGGAGCTCTGTGTTCTGTATAGAGTTGAACATTCCAGACCT +
Preference number: 6 (lower is better)
Translates to: TEGVSQSRSCRNSAR*LELCVLYRVEHSRP
Trigger: AGGTCTGGAATGTTCAACTCTATACAGAACACAGAGCTCCAGCAACCTGGCAGAATTACGACAGCTTCTTGATTGTGATACACCCTCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520675.1
ENST00000521381.6
ENST00000521657.5
CDS TCA 72 bp AGCCAATTTCTTCAGGCCTGGCTTCCTGTCCATCACTaGATCCAAGAGCTACTAAGGACCCTTTATTCACAG +
Preference number: 6 (lower is better)
Translates to: SQFLQAWLPVHH*IQELLRTLYSQ
Trigger: CTGTGAATAAAGGGTCCTTAGTAGCTCTTGGATTCAGTGATGGACAGGAAGCCAGGCCTGAAGAAATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5
CDS CCA 72 bp TTTGTCACACTGTCCATCTGTCGTCTGATTGTACCGTaGCACTCCACACACGAGCTTCACCTGCATATAAAA +
Preference number: 6 (lower is better)
Translates to: FVTLSICRLIVP*HSTHELHLHIK
Trigger: TTTTATATGCAGGTGAAGCTCGTGTGTGGAGTGCCACGGTACAATCAGACGACAGATGGACAGTGTGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517643.1
CDS CCA 72 bp CACAATCAAGAAGCTGTCGTAATTCTGCCAGGTTGCTaGAGCTCTGTGTTCTGTATAGAGTTGAACATTCCA +
Preference number: 6 (lower is better)
Translates to: HNQEAVVILPGC*SSVFCIELNIP
Trigger: TGGAATGTTCAACTCTATACAGAACACAGAGCTCCAGCAACCTGGCAGAATTACGACAGCTTCTTGATTGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520675.1
ENST00000521381.6
ENST00000521657.5
CDS TCA 72 bp CATTCAAGTAAGAATAAGCATTTACCACACACAGCCTaGGCTGCTTGCTTCCACAGACAGTCAAACAATCTG +
Preference number: 6 (lower is better)
Translates to: HSSKNKHLPHTA*AACFHRQSNNL
Trigger: CAGATTGTTTGACTGTCTGTGGAAGCAAGCAGCTCAGGCTGTGTGTGGTAAATGCTTATTCTTACTTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518813.5
CDS GCA 72 bp TTTAGTAGACGCATCTCGTACCAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTCATTCACTTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: FSRRISYQKGPV*CISKFFIHFFP
Trigger: AGGGAAGAAGTGAATGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTACTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000517698.5
ENST00000518292.1
ENST00000518813.5
ENST00000520550.1
ENST00000521381.6
ENST00000521657.5
ENST00000522084.5
ENST00000523807.5
ENST00000523872.1
CDS GCA 72 bp TTTAGTAGACGCATCTCGTACCAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTCATTCACTTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: FSRRISYQKGPV*CISKFFIHFFQ
Trigger: CTGGAAGAAGTGAATGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTACTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519025.5
CDS CCA 72 bp ATTCATACCGTTGTTGGCTACAGTAGTAGGTTTTGGTaGTTTAGGAGGCAGTGTTTGCAGGTTATGCATTTC +
Preference number: 6 (lower is better)
Translates to: IHTVVGYSSRFW*FRRQCLQVMHF
Trigger: GAAATGCATAACCTGCAAACACTGCCTCCTAAACCACCAAAACCTACTACTGTAGCCAACAACGGTATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS CCA 72 bp GTTATTCATACCGTTGTTGGCTACAGTAGTAGGTTTTaGTGGTTTAGGAGGCAGTGTTTGCAGGTTATGCAT +
Preference number: 6 (lower is better)
Translates to: VIHTVVGYSSRF*WFRRQCLQVMH
Trigger: ATGCATAACCTGCAAACACTGCCTCCTAAACCACCAAAACCTACTACTGTAGCCAACAACGGTATGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320694.12
CDS CAA 72 bp TCTTCCACCAGTGAATATTGGTCTTCAGTGTTTTCATaGCCCAACCACTCGTTCAACTTCTTTTGCCGAACA +
Preference number: 6 (lower is better)
Translates to: SSTSEYWSSVFS*PNHSFNFFCRT
Trigger: TGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGACCAATATTCACTGGTGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS CAA 72 bp GTATCACAATCAAGAAGCTGTCGTAATTCTGCCAGGTaGCTGGAGCTCTGTGTTCTGTATAGAGTTGAACAT +
Preference number: 6 (lower is better)
Translates to: VSQSRSCRNSAR*LELCVLYRVEH
Trigger: ATGTTCAACTCTATACAGAACACAGAGCTCCAGCAACCTGGCAGAATTACGACAGCTTCTTGATTGTGATAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520675.1
ENST00000521381.6
ENST00000521657.5
CDS CAA 90 bp TTGGTCTTCAGTGTTTTCATTGCCCAACCACTCGTTCAACTTCTTTaGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LVFSVFIAQPLVQLL*PNTFLSQPHQVLVS
Trigger: AGAGACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000523872.1
CDS GCA 72 bp TATCACAATCAAGAAGCTGTCGTAATTCTGCCAGGTTaGTGGAGCTCTGTGTTCTGTATAGAGTTGAACATT +
Preference number: 6 (lower is better)
Translates to: YHNQEAVVILPG*WSSVFCIELNI
Trigger: AATGTTCAACTCTATACAGAACACAGAGCTCCAGCAACCTGGCAGAATTACGACAGCTTCTTGATTGTGATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520675.1
ENST00000521381.6
ENST00000521657.5
CDS GCA 72 bp TTTAGTAGACGCATCTCGTACCAAAAAGGTCCCGTCTaGTGTATCTCGAAGTTTTTCATTCACTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: FSRRISYQKGPV*CISKFFIHFFL
Trigger: AAGGAAGAAGTGAATGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTACGAGATGCGTCTACTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521409.5
CDS CAA 72 bp GCATCTTGTAAGGACATATTGTTATTCATACCGTTGTaGGCTACAGTAGTAGGTTTTGGTGGTTTAGGAGGC +
Preference number: 6 (lower is better)
Translates to: ASCKDILLFIPL*ATVVGFGGLGG
Trigger: GCCTCCTAAACCACCAAAACCTACTACTGTAGCCAACAACGGTATGAATAACAATATGTCCTTACAAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320694.12
ENST00000336483.9
ENST00000518292.1
ENST00000518813.5
ENST00000521381.6
ENST00000521657.5
ENST00000522084.5
ENST00000523807.5
CDS CAA 90 bp TTACTCTTCAGTGTTTTCATTGCCCAACCACTCGTTCAACTTCTTTaGCCGAACACCTTTTTGAGTCAACCACATCAAGTATTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LLFSVFIAQPLVQLL*PNTFLSQPHQVLVS
Trigger: AGAGACCAATACTTGATGTGGTTGACTCAAAAAGGTGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520550.1
CDS GCA 72 bp AGGTTCACAGCAAAATCAAGTGGAAAGTACAGTGAGTaGCCATATTCCTCCTGCCCACATAGATTTAAATTA +
Preference number: 6 (lower is better)
Translates to: RFTAKSSGKYSE*PYSSCPHRFKL
Trigger: TAATTTAAATCTATGTGGGCAGGAGGAATATGGGCACTCACTGTACTTTCCACTTGATTTTGCTGTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520550.1
CDS CAA 72 bp CCATCTTTAGTAACTACTTACTCTTCAGTGTTTTCATaGCCCAACCACTCGTTCAACTTCTTTTGCCGAACA +
Preference number: 6 (lower is better)
Translates to: PSLVTTYSSVFS*PNHSFNFFCRT
Trigger: TGTTCGGCAAAAGAAGTTGAACGAGTGGTTGGGCAATGAAAACACTGAAGAGTAAGTAGTTACTAAAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520550.1
CDS CAA 90 bp GTCTTGGCATATTCTAAATCCAGGTCTTCCATATTCCAAACAGTATaGTACATTTGTGCAAGAGTTTCCTTGGCTGAGCTCAGTTATAAG +
Preference number: 6 (lower is better)
Translates to: VLAYSKSRSSIFQTV*YICARVSLAELSYK
Trigger: CTTATAACTGAGCTCAGCCAAGGAAACTCTTGCACAAATGTACAATACTGTTTGGAATATGGAAGACCTGGATTTAGAATATGCCAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336483.9
ENST00000517698.5
ENST00000518292.1
CDS TCA 72 bp GGTATGCTAGGCGACCTAATAAGCTTCTTCAATAGCTaGATATATTCTTCGGAGCTTTGTACTTCCAGTATT +
Preference number: 6 (lower is better)
Translates to: GMLGDLISFFNS*IYSSELCTSSI
Trigger: AATACTGGAAGTACAAAGCTCCGAAGAATATATTCAGCTATTGAAGAAGCTTATTAGGTCGCCTAGCATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523807.5
CDS TCA 72 bp GGTATGCTAGGCGACCTAATAAGCTTCTTCAATAGCTaGATATATTCTTCGGAGCTTTGTACTTCTACAAGT +
Preference number: 6 (lower is better)
Translates to: GMLGDLISFFNS*IYSSELCTSTS
Trigger: ACTTGTAGAAGTACAAAGCTCCGAAGAATATATTCAGCTATTGAAGAAGCTTATTAGGTCGCCTAGCATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522084.5
CDS CAA 72 bp TATTCTAAATCCAGGTCTTCCATATTCCAAACAGTATaGTACATTTGTGCAAGAGTTTCCTTGGCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: YSKSRSSIFQTV*YICARVSLAEL
Trigger: GAGCTCAGCCAAGGAAACTCTTGCACAAATGTACAATACTGTTTGGAATATGGAAGACCTGGATTTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336483.9
ENST00000517698.5
ENST00000518292.1
CDS CAA 90 bp AATGGCATTGTTTTCTTATTGTGTTTAAGGCAAGAATTCTTAGAGTaGTGCTTAATAGATAGAGTGCCTTCACACTCTGTTCTTAGGCAG +
Preference number: 6 (lower is better)
Translates to: NGIVFLLCLRQEFLE*CLIDRVPSHSVLRQ
Trigger: CTGCCTAAGAACAGAGTGTGAAGGCACTCTATCTATTAAGCACAACTCTAAGAATTCTTGCCTTAAACACAATAAGAAAACAATGCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523872.1
CDS TCA 72 bp CCTGGTTGTACAGAGCAGTCTGATTTTACGTTTTTATaGAAAGTGAATTCAGAGAATGTGTTAGAATTCCTA +
Preference number: 6 (lower is better)
Translates to: PGCTEQSDFTFL*KVNSENVLEFL
Trigger: TAGGAATTCTAACACATTCTCTGAATTCACTTTTCATAAAAACGTAAAATCAGACTGCTCTGTACAACCAGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517412.1
ENST00000521381.6
ENST00000521657.5