Pregenerated sensors for PIK3IP1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000228839Ensembl transcript IDs: ENST00000440456.5, ENST00000451161.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAAGAGATGAAAAACCCTGGGGATGCGGCCTCGCAGGTCTCAAACTaGTCGGCTGCTAAGCACAACCTGCATATCTCTTGGCTGAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: EEMKNPGDAASQVSN*SAAKHNLHISWLSS Trigger: GGAACTCAGCCAAGAGATATGCAGGTTGTGCTTAGCAGCCGATCAGTTTGAGACCTGCGAGGCCGCATCCCCAGGGTTTTTCATCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000440456.5 |
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| CDS TCA 90 bp | TGCTATGGCTGTACAGTAAGGAGACAGTTAGATGTCTGTATGTGTTaGCAGTGTTCAGCCACTTACCTTGAGCTCTCAGGTTCTCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: CYGCTVRRQLDVCMC*QCSATYLELSGSQD Trigger: ATCCTGAGAACCTGAGAGCTCAAGGTAAGTGGCTGAACACTGTCAACACATACAGACATCTAACTGTCTCCTTACTGTACAGCCATAGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS TCA 90 bp | GCACAAGGTAATGGGGTGGTCTTCAGTGGGTTACCATTTGATCTGTaGCACAAAGGTGAATGTTGCTTTCTCTTACAGTTCTGCTACTCA | + |
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Preference number: 5 (lower is better) Translates to: AQGNGVVFSGLPFDL*HKGECCFLLQFCYS Trigger: TGAGTAGCAGAACTGTAAGAGAAAGCAACATTCACCTTTGTGTCACAGATCAAATGGTAACCCACTGAAGACCACCCCATTACCTTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451161.1 |
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| CDS GCA 90 bp | ACTGGGGTAGTAAACAGTGGTGTCTTCTACCTTGACAGCATTGCATaGGTTTGTTTCTTGCTATGGCTGTACAGTAAGGAGACAGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: TGVVNSGVFYLDSIA*VCFLLWLYSKETVR Trigger: TCTAACTGTCTCCTTACTGTACAGCCATAGCAAGAAACAAACGCATGCAATGCTGTCAAGGTAGAAGACACCACTGTTTACTACCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS GCA 90 bp | ACAGTGGTGTCTTCTACCTTGACAGCATTGCATGCGTTTGTTTCTTaGTATGGCTGTACAGTAAGGAGACAGTTAGATGTCTGTATGTGT | + |
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Preference number: 5 (lower is better) Translates to: TVVSSTLTALHAFVS*YGCTVRRQLDVCMC Trigger: ACACATACAGACATCTAACTGTCTCCTTACTGTACAGCCATAGCAAGAAACAAACGCATGCAATGCTGTCAAGGTAGAAGACACCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS TCA 90 bp | GCACAAGGTAATGGGGTGGTCTTCAGTGGGTTACCATTTGATCTGTaGCACAAAGGTGAATGTTGCTTTCTCTTACAGTTACAAATGGAA | + |
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Preference number: 5 (lower is better) Translates to: AQGNGVVFSGLPFDL*HKGECCFLLQLQME Trigger: TTCCATTTGTAACTGTAAGAGAAAGCAACATTCACCTTTGTGTCACAGATCAAATGGTAACCCACTGAAGACCACCCCATTACCTTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440456.5 |
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| CDS TCA 72 bp | AAAAACCCTGGGGATGCGGCCTCGCAGGTCTCAAACTaGTCGGCTGCTAAGCACAACCTGCATATCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: KNPGDAASQVSN*SAAKHNLHISW Trigger: CCAAGAGATATGCAGGTTGTGCTTAGCAGCCGATCAGTTTGAGACCTGCGAGGCCGCATCCCCAGGGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000440456.5 |
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| CDS TCA 72 bp | TGGGACTGGGGTAGTAAACAGTGGTGTCTTCTACCTTaGCAGCATTGCATGCGTTTGTTTCTTGCTATGGCT | + |
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Preference number: 6 (lower is better) Translates to: WDWGSKQWCLLP*QHCMRLFLAMA Trigger: AGCCATAGCAAGAAACAAACGCATGCAATGCTGTCAAGGTAGAAGACACCACTGTTTACTACCCCAGTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS TCA 72 bp | TGTCTGTATGTGTTGACAGTGTTCAGCCACTTACCTTaGGCTCTCAGGTTCTCAGGATGTGCTTCTGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: CLYVLTVFSHLP*ALRFSGCASVK Trigger: TTTAACAGAAGCACATCCTGAGAACCTGAGAGCTCAAGGTAAGTGGCTGAACACTGTCAACACATACAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS TCA 72 bp | TGTACAGTAAGGAGACAGTTAGATGTCTGTATGTGTTaGCAGTGTTCAGCCACTTACCTTGAGCTCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CTVRRQLDVCMC*QCSATYLELSG Trigger: ACCTGAGAGCTCAAGGTAAGTGGCTGAACACTGTCAACACATACAGACATCTAACTGTCTCCTTACTGTACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS GCA 72 bp | GTAAACAGTGGTGTCTTCTACCTTGACAGCATTGCATaGGTTTGTTTCTTGCTATGGCTGTACAGTAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VNSGVFYLDSIA*VCFLLWLYSKE Trigger: CTCCTTACTGTACAGCCATAGCAAGAAACAAACGCATGCAATGCTGTCAAGGTAGAAGACACCACTGTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS CAA 72 bp | CACAAGGTAATGGGGTGGTCTTCAGTGGGTTACCATTaGATCTGTGACACAAAGGTGAATGTTGCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HKVMGWSSVGYH*ICDTKVNVAFS Trigger: AGAGAAAGCAACATTCACCTTTGTGTCACAGATCAAATGGTAACCCACTGAAGACCACCCCATTACCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS TCA 72 bp | AATGGGGTGGTCTTCAGTGGGTTACCATTTGATCTGTaGCACAAAGGTGAATGTTGCTTTCTCTTACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: NGVVFSGLPFDL*HKGECCFLLQF Trigger: GAACTGTAAGAGAAAGCAACATTCACCTTTGTGTCACAGATCAAATGGTAACCCACTGAAGACCACCCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451161.1 |
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| CDS CAA 72 bp | GTCTTCTACCTTGACAGCATTGCATGCGTTTGTTTCTaGCTATGGCTGTACAGTAAGGAGACAGTTAGATGT | + |
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Preference number: 6 (lower is better) Translates to: VFYLDSIACVCF*LWLYSKETVRC Trigger: ACATCTAACTGTCTCCTTACTGTACAGCCATAGCAAGAAACAAACGCATGCAATGCTGTCAAGGTAGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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| CDS TCA 72 bp | AATGGGGTGGTCTTCAGTGGGTTACCATTTGATCTGTaGCACAAAGGTGAATGTTGCTTTCTCTTACAGTTA | + |
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Preference number: 6 (lower is better) Translates to: NGVVFSGLPFDL*HKGECCFLLQL Trigger: TAACTGTAAGAGAAAGCAACATTCACCTTTGTGTCACAGATCAAATGGTAACCCACTGAAGACCACCCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440456.5 |
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| CDS CCA 72 bp | TACCTTGACAGCATTGCATGCGTTTGTTTCTTGCTATaGCTGTACAGTAAGGAGACAGTTAGATGTCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: YLDSIACVCFLL*LYSKETVRCLY Trigger: ATACAGACATCTAACTGTCTCCTTACTGTACAGCCATAGCAAGAAACAAACGCATGCAATGCTGTCAAGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440456.5 ENST00000451161.1 |
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