RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3IP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100100

Ensembl transcript IDs: ENST00000215912.10, ENST00000402249.7, ENST00000441972.5, ENST00000443175.1, ENST00000480654.5, ENST00000493034.1

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTCCCTGGGCCCAGGCCTGGCCCACGGTTGTCAAGGCACATCATTaGCAGCAAGCTGAAGCATACCAGCAGCCACAACCTAGATCTCAT +
Preference number: 1 (lower is better)
Translates to: SPWAQAWPTVVKAHH*QQAEAYQQPQPRSH
Trigger: ATGAGATCTAGGTTGTGGCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCTGGGCCCAGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 90 bp CTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTaGAAGCCCTTAGCAGCAGCATCACTGTGGGAGCTGCCACTGTCT +
Preference number: 1 (lower is better)
Translates to: LPVYPWFSSRGAGNV*KPLAAASLWELPLS
Trigger: AGACAGTGGCAGCTCCCACAGTGATGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 90 bp TGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTaGTTACGACCTTGGGCAAGTCACTTTTTCCTCTCTGGGGTCCTG +
Preference number: 1 (lower is better)
Translates to: CCAPSGSWALAMPVA*LRPWASHFFLSGVL
Trigger: CAGGACCCCAGAGAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 90 bp AGTGTGACATCACAGGTTAGAGGCCCTGCTGAGCTGCTAGCACAGTaGAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGC +
Preference number: 1 (lower is better)
Translates to: SVTSQVRGPAELLAQ*SGEMLRSVRKLGSC
Trigger: GCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCTAACCTGTGATGTCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 90 bp TCCCTGAAGAGAAACTGGGGCATCCCAGGTCTGCCTCTGCTCCTGTaGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGG +
Preference number: 1 (lower is better)
Translates to: SLKRNWGIPGLPLLL*PKAEQILLYPLPKW
Trigger: CCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCAGAGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 90 bp GCATCACTGTGGGAGCTGCCACTGTCTCCATCCACAGACAAAATCTaGTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGC +
Preference number: 1 (lower is better)
Translates to: ASLWELPLSPSTDKI*SKGWTRSTVRTLPS
Trigger: GCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGATGGAGACAGTGGCAGCTCCCACAGTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 90 bp TGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTaGCAAGGCCTCTTGAGTGTGACATCACAGGTTAGAGGCCCTGCT +
Preference number: 1 (lower is better)
Translates to: WAVEGFWKGSSMARS*QGLLSVTSQVRGPA
Trigger: AGCAGGGCCTCTAACCTGTGATGTCACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTaGCATGCCAGTAGCTTGCTTACGACCTTGGGCAAGTCACTTTTT +
Preference number: 1 (lower is better)
Translates to: QCSGEMLRSVRKLGS*HASSLLTTLGKSLF
Trigger: AAAAAGTGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 90 bp AAAGCAGATGGCTCCATAGAAAGCCCCACTAACCCGTCTCCACATTaGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGC +
Preference number: 1 (lower is better)
Translates to: KADGSIESPTNPSPH*AVEGFWKGSSMARS
Trigger: GCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTTAGTGGGGCTTTCTATGGAGCCATCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR TCA 90 bp CATACCAGCAGCCACAACCTAGATCTCATTCCCAACCCAAAGTTCTaGCTTCTGTACAAACTCGTTTCCAGTTCTCAGAGGTCAGTAGGG +
Preference number: 1 (lower is better)
Translates to: HTSSHNLDLIPNPKF*LLYKLVSSSQRSVG
Trigger: CCCTACTGACCTCTGAGAACTGGAAACGAGTTTGTACAGAAGTCAGAACTTTGGGTTGGGAATGAGATCTAGGTTGTGGCTGCTGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR TCA 90 bp ATTTGTAAAATGCGGAACAAGAACATCCCTCACAAGGCTTTTAAGTaGGGTGTAAAGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCA +
Preference number: 1 (lower is better)
Translates to: ICKMRNKNIPHKAFK*GVKAPKERVCPRSA
Trigger: TGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCTTTACACCTCACTTAAAAGCCTTGTGAGGGATGTTCTTGTTCCGCATTTTACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402249.7
3UTR-3UTR TCA 90 bp GTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGACCTACAGGAAGGTGCTaGCCTGGACGCCCGCAGGAC +
Preference number: 2 (lower is better)
Translates to: VTLAPVPYRKVLTWTPAGPTGRC*PGRPQD
Trigger: GTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGG...TCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp ACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGACCAGGGGTGGTGCCCTCCTaGGGGTCAACTGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: TLAPVPYRKVLTWTPAGPGVVPS*GSTGVW
Trigger: CCAGACTCCAGTTGACCCTCAGGAGGGCACCACCCC...TGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441972.5
3UTR-3UTR GCA 90 bp GTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGAGAGGGTGGGCTGTCCTaGACCAGTGTCTGCATGGGC +
Preference number: 2 (lower is better)
Translates to: VTLAPVPYRKVLTWTPAGEGGLS*TSVCMG
Trigger: GCCCATGCAGACACTGGTGCAGGACAGCCCACCCTC...TCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp TGTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGCAACTGGAGTCTGGCTaGTGTGGACCACGACAGTCT +
Preference number: 2 (lower is better)
Translates to: CDPSPSALQEGADLDARRQLESG*CGPRQS
Trigger: AGACTGTCGTGGTCCACACCAGCCAGACTCCAGTTG...CCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441972.5
3UTR-3UTR CCA 90 bp AAGCACAGAGGAGCCTGGGGGAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGCTAGCTGTAGGAGGGTaGGCTGTCCTGCACCAGTGT +
Preference number: 2 (lower is better)
Translates to: KHRGAWGSSPSIPGSVPGLAVGG*AVLHQC
Trigger: ACACTGGTGCAGGACAGCCCACCCTCCTACAGCTAG...CCCTGGAACTGAACCAGGGATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp AGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTTGCGCTCCGTCTCCTGCACCAGTGTCTaGATGGGCTCCTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: RGPAELLAQCSGEMLRSVSCTSV*MGSCPL
Trigger: CAGTGGGCAGGAGCCCATGCAGACACTGGTGCAGGA...GACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp AGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCGAGGGTGGGCTGTCCTaGACCAGTGTCTGCATGGGC +
Preference number: 2 (lower is better)
Translates to: RPGPRLSRHIIASKLKHTEGGLS*TSVCMG
Trigger: GCCCATGCAGACACTGGTGCAGGACAGCCCACCCTC...GGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp AAGCACAGAGGAGCCTGGGGGAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGCATCACTGTGGGAGCTaGCACTGTCTCCATCCACAG +
Preference number: 2 (lower is better)
Translates to: KHRGAWGSSPSIPGSVPGHHCGS*HCLHPQ
Trigger: CTGTGGATGGAGACAGTGGCAGCTCCCACAGTGATG...CCCTGGAACTGAACCAGGGATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CAA 90 bp GCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTaGGAAGCCCTTAGCAGCAGCATCACTGTGGGAGCTGCCACTGTC +
Preference number: 2 (lower is better)
Translates to: APRLSLVQFQGCRQC*EALSSSITVGAATV
Trigger: GACAGTGGCAGCTCCCACAGTGATGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp AGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCCACAGGTGGGGTTGGTaGAGGCAGACAAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: RPGPRLSRHIIASKLKHTHRWGW*RQTRAE
Trigger: CTCTGCCCTTGTCTGCCTTCACCAACCCCACCTGTG...GGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441972.5
3UTR-3UTR CCA 90 bp GGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCAGCAGCCTGCCTCTGCTCCTGTaGCCAAAGGCGGAGCAGATC +
Preference number: 2 (lower is better)
Translates to: GPRLSRHIIASKLKHTSSLPLLL*PKAEQI
Trigger: GATCTGCTCCGCCTTTGGCCACAGGAGCAGAGGCAG...GCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGGAAGGTGCTGACCTaGACGCCCGCAGGACCACCT +
Preference number: 2 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARRKVLT*TPAGPP
Trigger: AGGTGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCT...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCGCTCCGTCAGGAAGCTaGGCTCTTGCCATGCCAGTA +
Preference number: 2 (lower is better)
Translates to: QCSGEMLRSVRKLGSCHAAPSGS*ALAMPV
Trigger: TACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGC...GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CAA 90 bp GTTAGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTaGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTG +
Preference number: 2 (lower is better)
Translates to: VRGPAELLAQCSGEM*RSVRKLGSCHASSL
Trigger: CAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGTCCTGCACCAGTGTCTaGATGGGCTCCTGCCCACTG +
Preference number: 2 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARSCTSV*MGSCPL
Trigger: CAGTGGGCAGGAGCCCATGCAGACACTGGTGCAGGA...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCAAGCACAGAGGAGCCTaGGGGAGCTCCCCGTCTATC +
Preference number: 2 (lower is better)
Translates to: LSLVQFQGCRQCLEALSSKHRGA*GSSPSI
Trigger: GATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT...GCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAAGCACAGAGGAGCCTaGGGGAGCTCCCCGTCTATC +
Preference number: 2 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARKHRGA*GSSPSI
Trigger: GATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp ATAGAAAGCCCCACTAACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAATCCCAGGTCTGCCTCTaGTCCTGTGGCCAAAGGCGG +
Preference number: 2 (lower is better)
Translates to: IESPTNPSPHWAVEGFWKSQVCL*SCGQRR
Trigger: CCGCCTTTGGCCACAGGAGCAGAGGCAGACCTGGGA...TTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTTAGTGGGGCTTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CTCTTGAGTGTGACATCACAGGTTAGAGGCCCTGCTGAGCTGCTAGCACAGTGCCTCCCCGTCTATCCCTaGTTCAGTTCCAGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: LLSVTSQVRGPAELLAQCLPVYP*FSSRGA
Trigger: TGCACCCCTGGAACTGAACCAGGGATAGACGGGGAG...GCACTGTGCTAGCAGCTCAGCAGGGCCTCTAACCTGTGATGTCACACTCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp TGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTGGAGTCTGGCTGGTGTaGACCACGACAGTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: CSGEMLRSVRKLGSCHASGVWLV*TTTVFS
Trigger: TGAGAAGACTGTCGTGGTCCACACCAGCCAGACTCC...ACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441972.5
3UTR-3UTR CCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGGGGTCAACTGGAGTCTaGCTGGTGTGGACCACGACA +
Preference number: 2 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARGSTGV*LVWTTT
Trigger: TGTCGTGGTCCACACCAGCCAGACTCCAGTTGACCC...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441972.5
3UTR CAA 90 bp ATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTaGCTTACGACCTTGGGCAAGTCACTTTTTCCTCTCTGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: MLRSVRKLGSCHASS*LTTLGKSLFPLWGP
Trigger: AGGACCCCAGAGAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CAA 90 bp GGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTaGAGTGTGACATCACAGGTTAGAGGCCCTGCTGAGCTGCTAGCA +
Preference number: 2 (lower is better)
Translates to: GFWKGSSMARSCQGL*SVTSQVRGPAELLA
Trigger: TGCTAGCAGCTCAGCAGGGCCTCTAACCTGTGATGTCACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp TACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGCCTACAGGAAGGTGCTaGCCTGGACGCCCGCAGGAC +
Preference number: 2 (lower is better)
Translates to: YLASELSFQVSLLEAAHKPTGRC*PGRPQD
Trigger: GTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGG...CTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp CTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCCATCACTGTGGGAGCTaGCACTGTCTCCATCCACAG +
Preference number: 2 (lower is better)
Translates to: LSLVQFQGCRQCLEALSSHHCGS*HCLHPQ
Trigger: CTGTGGATGGAGACAGTGGCAGCTCCCACAGTGATG...GCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp GAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGGGTGCAGGCAATGTTTaGAAGCCCTTAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: ELPVYPWFSSRGAGNVWKGAGNV*KPLAAA
Trigger: TGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACC...CTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAACCCGTCTCCACATTaGGCAGTGGAAGGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARNPSPH*AVEGFW
Trigger: CCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTT...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp GCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGGGGAGCAAGCCCTaGAGTGCTTTATTACCTTGC +
Preference number: 2 (lower is better)
Translates to: AVEGFWKGSSMARSCQGLLGSKP*SALLPC
Trigger: GCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCCAA...GAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCCCTGGGCCCAGGCCTaGCCCACGGTTGTCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LYYLASELSFQVSLLEAAPWAQA*PTVVKA
Trigger: TGCCTTGACAACCGTGGGCCAGGCCTGGGCCCAGGG...AGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp AGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGTATAATTCCCATAGGTTAGCTAGGAAGGTGCTGACCTaGACGCCCGCAGGACCACCT +
Preference number: 2 (lower is better)
Translates to: SLLEAAHKAPQYNSHRLARKVLT*TPAGPP
Trigger: AGGTGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCT...AGCTAACCTATGGGAATTATACTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp CTCTTGAGTGTGACATCACAGGTTAGAGGCCCTGCTGAGCTGCTAGCACAGTGCTTGGGGAGCAAGCCCTaGAGTGCTTTATTACCTTGC +
Preference number: 2 (lower is better)
Translates to: LLSVTSQVRGPAELLAQCLGSKP*SALLPC
Trigger: GCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCCAA...GCACTGTGCTAGCAGCTCAGCAGGGCCTCTAACCTGTGATGTCACACTCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp GGGGAGCAAGCCCTGAAGTGCTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGCAGACAAGGGCAGAGTaGTTCGCTGCATCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: GEQALKCFITLPLSLVSRQTRAE*FAASPS
Trigger: AGAGGGAGATGCAGCGAATCACTCTGCCCTTGTCTG...CCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441972.5
3UTR-3UTR GCA 90 bp TGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTGAGCAAGCCCTGAAGTaGTTTATTACCTTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: CSGEMLRSVRKLGSCHASEQALK*FITLPL
Trigger: CAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTC...ACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp GAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTGAGCTGCTAGCACAGTaGAGTGGAGAAATGTTGCGC +
Preference number: 2 (lower is better)
Translates to: EGFWKGSSMARSCQGLLSELLAQ*SGEMLR
Trigger: GCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTC...ACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp CCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGGCAGAGTGATTCGCTaGATCTCCCTCTCACATACT +
Preference number: 2 (lower is better)
Translates to: PVYPWFSSRGAGNVWKPLGRVIR*ISLSHT
Trigger: AGTATGTGAGAGGGAGATGCAGCGAATCACTCTGCC...TAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441972.5
3UTR-3UTR CCA 90 bp CAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCAGCATCACTGTGATCTGCTCCAAGGGATaGACAAGGAGCACTGTTAGG +
Preference number: 2 (lower is better)
Translates to: QFQGCRQCLEALSSSITVICSKG*TRSTVR
Trigger: CCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGAT...CACAGTGATGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp GGGGAGCAAGCCCTGAAGTGCTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGGTTCAGTTCCAGGGGTaGAGGCAATGTTTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: GEQALKCFITLPLSLVSRVQFQG*RQCLEA
Trigger: GGCTTCCAAACATTGCCTGCACCCCTGGAACTGAAC...CCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CTTCTGTACAAACTCGTTTCCAGTTCTCAGAGGTCAGTAGGGAGTTCCATCCCACTAGCTGTAGGAGGGTaGGCTGTCCTGCACCAGTGT +
Preference number: 2 (lower is better)
Translates to: LLYKLVSSSQRSVGSSIPLAVGG*AVLHQC
Trigger: ACACTGGTGCAGGACAGCCCACCCTCCTACAGCTAG...TGGGATGGAACTCCCTACTGACCTCTGAGAACTGGAAACGAGTTTGTACAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGGCTTGCTTACGACCTTaGGCAAGTCACTTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARACLRP*ASHFFL
Trigger: GAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGC...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp GCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCCTTACCTGTGCAAAATaGAGACAGGTCACTATCCAT +
Preference number: 2 (lower is better)
Translates to: AVEGFWKGSSMARSCQGLLTCAK*RQVTIH
Trigger: ATGGATAGTGACCTGTCTTCATTTTGCACAGGTAAG...GAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp TCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGATCTGCTCCAAGGGATaGACAAGGAGCACTGTTAGG +
Preference number: 2 (lower is better)
Translates to: SELSFQVSLLEAAHKAPQICSKG*TRSTVR
Trigger: CCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGAT...CTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp ATATTCTCTTCTCCAGCATCACTAACACCAAGAGACCACCTGAGGTCTAGGTCCGGTCCCCAAAGCAGATaGCTCCATAGAAAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: IFSSPASLTPRDHLRSRSGPQSR*LHRKPH
Trigger: GTGGGGCTTTCTATGGAGCCATCTGCTTTGGGGACC...GGACCTAGACCTCAGGTGGTCTCTTGGTGTTAGTGATGCTGGAGAAGAGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp ATATTCTCTTCTCCAGCATCACTAACACCAAGAGACCACCTGAGGTCTAGGTCCGCCCACAGTGGAGACTaGGGCCATCTTAGTAAAGCA +
Preference number: 2 (lower is better)
Translates to: IFSSPASLTPRDHLRSRSAHSGD*GHLSKA
Trigger: TGCTTTACTAAGATGGCCTCAGTCTCCACTGTGGGC...GGACCTAGACCTCAGGTGGTCTCTTGGTGTTAGTGATGCTGGAGAAGAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR TCA 90 bp ACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTACTTACCTGTGCAAAATaGAGACAGGTCACTATCCAT +
Preference number: 2 (lower is better)
Translates to: TRLHIGQWKGSGKEALWLLTCAK*RQVTIH
Trigger: ATGGATAGTGACCTGTCTTCATTTTGCACAGGTAAG...TAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp ACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTACTACTCTCTTACCTGTaGAAAATGAAGACAGGTCAC +
Preference number: 2 (lower is better)
Translates to: TRLHIGQWKGSGKEALWLLLSYL*KMKTGH
Trigger: GTGACCTGTCTTCATTTTGCACAGGTAAGAGAGTAG...TAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp GGGGAGCAAGCCCTGAAGTGCTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGTGCCATCCCTTGACCTaGTTTACCTTAACCATGAAT +
Preference number: 2 (lower is better)
Translates to: GEQALKCFITLPLSLVSRCHPLT*FTLTMN
Trigger: ATTCATGGTTAAGGTAAAGCAGGTCAAGGGATGGCA...CCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp GTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATATGCAGTGGAGAAATGTTaGGCTCCGTCAGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: VKCRAISHTICRCQNEVYAVEKC*APSGSW
Trigger: CCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGC...ATATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CCA 90 bp ATATTCTCTTCTCCAGCATCACTAACACCAAGAGACCACCTGAGGTCTAGGTCCTATCCTCTTCCTAAGTaGAATGCTCAGTGCAATTCT +
Preference number: 2 (lower is better)
Translates to: IFSSPASLTPRDHLRSRSYPLPK*NAQCNS
Trigger: AGAATTGCACTGAGCATTCCACTTAGGAAGAGGATA...GGACCTAGACCTCAGGTGGTCTCTTGGTGTTAGTGATGCTGGAGAAGAGAATAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp TTTCAATGCCATCCCTTGACCTGCTTTACCTTAACCATGAATAACAGTGTATGCTCCACAGACAAAATCTaGTCCAAGGGATGGACAAGG +
Preference number: 2 (lower is better)
Translates to: FQCHPLTCFTLTMNNSVCSTDKI*SKGWTR
Trigger: CCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGA...GCATACACTGTTATTCATGGTTAAGGTAAAGCAGGTCAAGGGATGGCATTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp GTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATATTGCCATCCCTTGACCTaGTTTACCTTAACCATGAAT +
Preference number: 2 (lower is better)
Translates to: VKCRAISHTICRCQNEVYCHPLT*FTLTMN
Trigger: ATTCATGGTTAAGGTAAAGCAGGTCAAGGGATGGCA...ATATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp CTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTAAGTGGAATGCTCAGTaGAATTCTTCCTTTCCTTAT +
Preference number: 2 (lower is better)
Translates to: LYYLASELSFQVSLLEAAKWNAQ*NSSFPY
Trigger: ATAAGGAAAGGAAGAATTGCACTGAGCATTCCACTT...AGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR GCA 90 bp GTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATATAAGTGGAATGCTCAGTaGAATTCTTCCTTTCCTTAT +
Preference number: 2 (lower is better)
Translates to: VKCRAISHTICRCQNEVYKWNAQ*NSSFPY
Trigger: ATAAGGAAAGGAAGAATTGCACTGAGCATTCCACTT...ATATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 72 bp ACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTaGACGCCCGCAGGACCACCTGCTAAATCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: TLAPVPYRKVLT*TPAGPPAKSGP
Trigger: TGGGCCTGATTTAGCAGGTGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 72 bp GCCCAGGCCTGGCCCACGGTTGTCAAGGCACATCATTaGCAGCAAGCTGAAGCATACCAGCAGCCACAACCT +
Preference number: 3 (lower is better)
Translates to: AQAWPTVVKAHH*QQAEAYQQPQP
Trigger: AGGTTGTGGCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CAA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCGGGTGCAGGCAATGTTaGGAAGCCCTTAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: QCSGEMLRSVRKLGSCHAGCRQC*EALSSS
Trigger: GCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCC...GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CAA 90 bp AGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCTTGGGCAAGTCAAGGCCTGGCCCACGGTaGTCAAGGCACATCATTGCC +
Preference number: 3 (lower is better)
Translates to: RKLGSCHASSLLTTLGKSRPGPR*SRHIIA
Trigger: GGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT...TGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 72 bp GGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTaGCATGCCAGTAGCTTGCTTACGACCTTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: GEMLRSVRKLGS*HASSLLTTLGK
Trigger: CTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 72 bp TCACAGGTTAGAGGCCCTGCTGAGCTGCTAGCACAGTaGAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: SQVRGPAELLAQ*SGEMLRSVRKL
Trigger: CAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCTAACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 72 bp GAGACTGAGGCCATCTTAGTAAAGCACAGAGGAGCCTaGGGGAGCTCCCCGTCTATCCCTGGTTCAGTTCCA +
Preference number: 3 (lower is better)
Translates to: ETEAILVKHRGA*GSSPSIPGSVP
Trigger: TGGAACTGAACCAGGGATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTTTACTAAGATGGCCTCAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 72 bp TATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTaGAAGCCCTTAGCAGCAGCATCACTGTGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: YPWFSSRGAGNV*KPLAAASLWEL
Trigger: CAGCTCCCACAGTGATGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 72 bp AGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTaGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCT +
Preference number: 3 (lower is better)
Translates to: SAVEKCCAPSGS*ALAMPVACLRP
Trigger: AGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 72 bp TGGGAGCTGCCACTGTCTCCATCCACAGACAAAATCTaGTCCAAGGGATGGACAAGGAGCACTGTTAGGACC +
Preference number: 3 (lower is better)
Translates to: WELPLSPSTDKI*SKGWTRSTVRT
Trigger: GGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGATGGAGACAGTGGCAGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 72 bp CCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTaGTTACGACCTTGGGCAAGTCACTTTTTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: PSGSWALAMPVA*LRPWASHFFLS
Trigger: AGAGAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CCA 72 bp GGCTCCATAGAAAGCCCCACTAACCCGTCTCCACATTaGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATG +
Preference number: 3 (lower is better)
Translates to: GSIESPTNPSPH*AVEGFWKGSSM
Trigger: CATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTTAGTGGGGCTTTCTATGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR TCA 72 bp ATAACAGTGTATGCCACTCAAGCCCACAGTGGAGACTaGGGCCATCTTAGTAAAGCACAGAGGAGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: ITVYATQAHSGD*GHLSKAQRSLG
Trigger: CCCCAGGCTCCTCTGTGCTTTACTAAGATGGCCTCAGTCTCCACTGTGGGCTTGAGTGGCATACACTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 72 bp GAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTaGCAAGGCCTCTTGAGTGTGACATCACAGGTTAGA +
Preference number: 3 (lower is better)
Translates to: EGFWKGSSMARS*QGLLSVTSQVR
Trigger: TCTAACCTGTGATGTCACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CAA 90 bp GTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATATAGGCCTGGCCCACGGTaGTCAAGGCACATCATTGCC +
Preference number: 3 (lower is better)
Translates to: VKCRAISHTICRCQNEVYRPGPR*SRHIIA
Trigger: GGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT...ATATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CAA 90 bp GGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTGTGACATCACAGGTTAAGTGCTTTATTACCTaGCCTCTGAGCTTAGTTTCC +
Preference number: 3 (lower is better)
Translates to: GSSMARSCQGLLSVTSQVKCFIT*PLSLVS
Trigger: GGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTT...AACCTGTGATGTCACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CAA 90 bp GTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATATGGGTGCAGGCAATGTTaGGAAGCCCTTAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: VKCRAISHTICRCQNEVYGCRQC*EALSSS
Trigger: GCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCC...ATATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR-3UTR CAA 90 bp AGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGTATAATTCCCATAGGTTAGCTTTTCAATGCCATCCCTaGACCTGCTTTACCTTAACC +
Preference number: 3 (lower is better)
Translates to: SLLEAAHKAPQYNSHRLAFQCHP*TCFTLT
Trigger: GGTTAAGGTAAAGCAGGTCAAGGGATGGCATTGAAA...AGCTAACCTATGGGAATTATACTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR TCA 72 bp ATGCGGAACAAGAACATCCCTCACAAGGCTTTTAAGTaGGGTGTAAAGGCACCAAAGGAAAGGGTTTGTCCA +
Preference number: 3 (lower is better)
Translates to: MRNKNIPHKAFK*GVKAPKERVCP
Trigger: TGGACAAACCCTTTCCTTTGGTGCCTTTACACCTCACTTAAAAGCCTTGTGAGGGATGTTCTTGTTCCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
3UTR CCA 72 bp AAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTaGAATGCTCAGTGCAATTCTTCCTTTCCTTATGAA +
Preference number: 3 (lower is better)
Translates to: KAEQILLYPLPK*NAQCNSSFPYE
Trigger: TTCATAAGGAAAGGAAGAATTGCACTGAGCATTCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR GCA 72 bp AGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATaGGGAACAAGAACATCCCTCACAAGGCTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: SKSLTEASSFVK*GTRTSLTRLLS
Trigger: ACTTAAAAGCCTTGTGAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp TGTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGCCCTGGGCCCAGGCCTaGCCCACGGTTGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CDPSPSALQEGADLDARRPWAQA*PTVVKA
Trigger: TGCCTTGACAACCGTGGGCCAGGCCTGGGCCCAGGG...CCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp ACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGACCAGGCAGTAACTGTGATTaGCGGCCCCCGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: TLAPVPYRKVLTWTPAGPGSNCD*RPPTRG
Trigger: CCCCCGTGTCGGGGGCCGGCAATCACAGTTACTGCC...TGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp TCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCCGCCGGCCTCGCCACTaGCGTAGCACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SAPRDGQGALLGPYPALPRRPRH*RSTRAR
Trigger: GCGGGCCCTGGTGCTACGTCAGTGGCGAGGCCGGCG...GGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp TGTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGTCCGCACCCGCTGGCTaGTCCCAATCACTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CDPSPSALQEGADLDARRSAPAG*SQSLAA
Trigger: TGCAGCCAGTGATTGGGATCAGCCAGCGGGTGCGGA...CCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGACCAAAGGCTGGCAGGGCCTaGGAGGTGGTCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: TLAPVPYRKVLTWTPAGPKAGRA*EVVSGQ
Trigger: CTGTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTT...TGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TGTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGAGGAAGGTGCTGACCTaGACGCCCGCAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: CDPSPSALQEGADLDARRRKVLT*TPAGPP
Trigger: AGGTGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCT...CCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGACCAGCTGATCCCAATCACTaGCTGCACAGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TLAPVPYRKVLTWTPAGPADPNH*LHSCRL
Trigger: GAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGC...TGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCGGCGCGGGGGAGGTCTaGTCCTCCCGGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AVEGFWKGSSMARSCQGLGAGEV*SSRYRW
Trigger: CCACCTGTACCGGGAGGACCAGACCTCCCCCGCGCC...GAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCCGCCGGCCTCGCCACTaGCGTAGCACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LASELSFQVSLLEAAHKARRPRH*RSTRAR
Trigger: GCGGGCCCTGGTGCTACGTCAGTGGCGAGGCCGGCG...GGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCGGGGTGGTGCCCTCCTaGGGGTCAACTGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QCSGEMLRSVRKLGSCHAGVVPS*GSTGVW
Trigger: CCAGACTCCAGTTGACCCTCAGGAGGGCACCACCCC...GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTTGCGCTCCGTCGGCAGTAACTGTGATTaGCGGCCCCCGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: RGPAELLAQCSGEMLRSVGSNCD*RPPTRG
Trigger: CCCCCGTGTCGGGGGCCGGCAATCACAGTTACTGCC...GACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCAGCAGCCACTGGCTGCACAGCTaGCGCCTCACTCCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPRLSRHIIASKLKHTSSHWLHS*RLTPSG
Trigger: CCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTG...GCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGACATCACTGTGGGAGCTaGCACTGTCTCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: VTLAPVPYRKVLTWTPAGHHCGS*HCLHPQ
Trigger: CTGTGGATGGAGACAGTGGCAGCTCCCACAGTGATG...TCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AAGCACAGAGGAGCCTGGGGGAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGCTGATCCCAATCACTaGCTGCACAGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KHRGAWGSSPSIPGSVPGADPNH*LHSCRL
Trigger: GAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGC...CCCTGGAACTGAACCAGGGATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGATCCCTGAAGAGAAACTaGGGCATCCCAGGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VTLAPVPYRKVLTWTPAGSLKRN*GIPGLP
Trigger: AGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGA...TCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp AGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTTGCGCTCCGTCTCCGCACCCGCTGGCTaGTCCCAATCACTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGPAELLAQCSGEMLRSVSAPAG*SQSLAA
Trigger: TGCAGCCAGTGATTGGGATCAGCCAGCGGGTGCGGA...GACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp GAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGGGGGTGGTGCCCTCCTaGGGGTCAACTGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ELPVYPWFSSRGAGNVWKGVVPS*GSTGVW
Trigger: CCAGACTCCAGTTGACCCTCAGGAGGGCACCACCCC...CTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTCAGCCCACAGGGCTCCTGCACCAGTGTCTaGATGGGCTCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: WTRSTVRTLPSLTLSPQGSCTSV*MGSCPL
Trigger: CAGTGGGCAGGAGCCCATGCAGACACTGGTGCAGGA...GCCCTGTGGGCTGAGGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCTTGGTCCCAGGTCTGCCTCTaGTCCTGTGGCCAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: APSGSWALAMPVACLRPWSQVCL*SCGQRR
Trigger: CCGCCTTTGGCCACAGGAGCAGAGGCAGACCTGGGA...CCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGAAGGAAGCTGGGCTCTTaGCATGCCAGTAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VTLAPVPYRKVLTWTPAGRKLGS*HASSLL
Trigger: AAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCT...TCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CCCAGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATGCAGGAGCGAACACCTaGACCTCATCTGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: PRPGPRLSRHIIASKLKHAGANT*TSSAPG
Trigger: GCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGC...ATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGACACTGGCTGCACAGCTaGCGCCTCACTCCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGHWLHS*RLTPSG
Trigger: CCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTG...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp ACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGACCAGGCAGAGTGATTCGCTaGATCTCCCTCTCACATACT +
Preference number: 4 (lower is better)
Translates to: TLAPVPYRKVLTWTPAGPGRVIR*ISLSHT
Trigger: AGTATGTGAGAGGGAGATGCAGCGAATCACTCTGCC...TGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCGAGGGTGGGCTGTCCTaGACCAGTGTCTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: SAPRDGQGALLGPYPALPEGGLS*TSVCMG
Trigger: GCCCATGCAGACACTGGTGCAGGACAGCCCACCCTC...GGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCTCCCAGGTCTGCCTCTaGTCCTGTGGCCAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: RPGPRLSRHIIASKLKHTSQVCL*SCGQRR
Trigger: CCGCCTTTGGCCACAGGAGCAGAGGCAGACCTGGGA...GGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AAGCACAGAGGAGCCTGGGGGAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGCAACTGGAGTCTGGCTaGTGTGGACCACGACAGTCT +
Preference number: 4 (lower is better)
Translates to: KHRGAWGSSPSIPGSVPGQLESG*CGPRQS
Trigger: AGACTGTCGTGGTCCACACCAGCCAGACTCCAGTTG...CCCTGGAACTGAACCAGGGATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTTGCGCTCCGTCAAGCACAGAGGAGCCTaGGGGAGCTCCCCGTCTATC +
Preference number: 4 (lower is better)
Translates to: RGPAELLAQCSGEMLRSVKHRGA*GSSPSI
Trigger: GATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT...GACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCTTGGCTGCCTCTGCTCCTGTaGCCAAAGGCGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: APSGSWALAMPVACLRPWLPLLL*PKAEQI
Trigger: GATCTGCTCCGCCTTTGGCCACAGGAGCAGAGGCAG...CCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CAA 72 bp CCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTaGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCC +
Preference number: 4 (lower is better)
Translates to: PAELLAQCSGEM*RSVRKLGSCHA
Trigger: GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCGCAGGAGCGAACACCTaGACCTCATCTGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: AVEGFWKGSSMARSCQGLAGANT*TSSAPG
Trigger: GCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGC...GAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGGAGGGTGGGCTGTCCTaGACCAGTGTCTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: PSPHWAVEGFWKGSSMAREGGLS*TSVCMG
Trigger: GCCCATGCAGACACTGGTGCAGGACAGCCCACCCTC...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CCCAGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATTCCTCCCGGTACAGGTaGCCGTTGTCCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: PRPGPRLSRHIIASKLKHSSRYR*PLSQKQ
Trigger: CTGTTTCTGGGACAACGGCCACCTGTACCGGGAGGA...ATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGTCACTATCCATCCCTGAAGAGAAACTGGGGCATCCCAGGTCTGCCTCTGCTCTGGGAGGTGGTCTCTaGACAGCGCAGGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RSLSIPEEKLGHPRSASALGGGL*TAQVLA
Trigger: TGCGAGGACCTGCGCTGTCCAGAGACCACCTCCCAG...AGCAGAGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGATGGATAGTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGAGCAGGGCCTGGGAGGTaGTCTCTGGACAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGAGPGR*SLDSAG
Trigger: ACCTGCGCTGTCCAGAGACCACCTCCCAGGCCCTGC...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCTTCATCCGCACCCGCTaGCTGATCCCAATCACTGGC +
Preference number: 4 (lower is better)
Translates to: QCSGEMLRSVRKLGSCHAFIRTR*LIPITG
Trigger: GCCAGTGATTGGGATCAGCCAGCGGGTGCGGATGAA...GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGGGGTCAACTGGAGTCTaGCTGGTGTGGACCACGACA +
Preference number: 4 (lower is better)
Translates to: VQWRNVALRQEAGLLPCQGSTGV*LVWTTT
Trigger: TGTCGTGGTCCACACCAGCCAGACTCCAGTTGACCC...CTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTCAGCCTGCCTCTGCTCCTGTaGCCAAAGGCGGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: SKGWTRSTVRTLPSLTLSLPLLL*PKAEQI
Trigger: GATCTGCTCCGCCTTTGGCCACAGGAGCAGAGGCAG...GCTGAGGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTACGCCGGCCTCGCCACTaGCGTAGCACCAGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVRRPRH*RSTRAR
Trigger: GCGGGCCCTGGTGCTACGTCAGTGGCGAGGCCGGCG...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR TCA 90 bp TGTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGTCTTTGATTGCTTTATaGGTTAGGGGCTGTGACCCT +
Preference number: 4 (lower is better)
Translates to: CDPSPSALQEGADLDARRSLIAL*VRGCDP
Trigger: AGGGTCACAGCCCCTAACTCATAAAGCAATCAAAGA...CCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp GAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCACCAAGAGACCACCTaGGGTCTAGGTCCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ELPVYPWFSSRGAGNVWKHQETT*GLGPQS
Trigger: GCTTTGGGGACCTAGACCTCAGGTGGTCTCTTGGTG...CTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTTGCGCTCCGTCGCTTCCCAGCTAGCTTaGTGCAGCGCGAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RGPAELLAQCSGEMLRSVASQLA*CSASCF
Trigger: AAAACAGCTCGCGCTGCAGCAAGCTAGCTGGGAAGC...GACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGGGCGCGGGGGAGGTCTaGTCCTCCCGGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKGAGEV*SSRYRW
Trigger: CCACCTGTACCGGGAGGACCAGACCTCCCCCGCGCC...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp CTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCGCAGGGCCTGGGAGGTaGTCTCTGGACAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LASELSFQVSLLEAAHKAAGPGR*SLDSAG
Trigger: ACCTGCGCTGTCCAGAGACCACCTCCCAGGCCCTGC...GGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GGGGAGCAAGCCCTGAAGTGCTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGGAGCGGGCAGGGCGTTaGCAGGAGCGAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: GEQALKCFITLPLSLVSRERAGR*QERTPA
Trigger: TGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTC...CCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ATAGAAAGCCCCACTAACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGAGCGGGCAGGGCGTTaGCAGGAGCGAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: IESPTNPSPHWAVEGFWKERAGR*QERTPA
Trigger: TGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTC...TTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTTAGTGGGGCTTTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGTTCATCCGCACCCGCTaGCTGATCCCAATCACTGGC +
Preference number: 4 (lower is better)
Translates to: ELPVYPWFSSRGAGNVWKFIRTR*LIPITG
Trigger: GCCAGTGATTGGGATCAGCCAGCGGGTGCGGATGAA...CTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCGGAGTCTGGCTGGTGTaGACCACGACAGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QCSGEMLRSVRKLGSCHAGVWLV*TTTVFS
Trigger: TGAGAAGACTGTCGTGGTCCACACCAGCCAGACTCC...GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GGAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAACTAGCTGTAGGAGGGTaGGCTGTCCTGCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: GAPRLSLVQFQGCRQCLELAVGG*AVLHQC
Trigger: ACACTGGTGCAGGACAGCCCACCCTCCTACAGCTAG...TTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CCCAGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATGGTCCCCAAAGCAGATaGCTCCATAGAAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PRPGPRLSRHIIASKLKHGPQSR*LHRKPH
Trigger: GTGGGGCTTTCTATGGAGCCATCTGCTTTGGGGACC...ATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp GCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCAGGAGTAGCCCAAGATaGTGCCAGCTCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: AVEGFWKGSSMARSCQGLRSSPR*CQLRWQ
Trigger: TTGCCATCGGAGCTGGCATCATCTTGGGCTACTCCT...GAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215912.10
CDS-3UTR TCA 90 bp TGTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGCTTACCTGTGCAAAATaGAGACAGGTCACTATCCAT +
Preference number: 4 (lower is better)
Translates to: CDPSPSALQEGADLDARRLTCAK*RQVTIH
Trigger: ATGGATAGTGACCTGTCTTCATTTTGCACAGGTAAG...CCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTACACCAAGAGACCACCTaGGGTCTAGGTCCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PVYPWFSSRGAGNVWKPLHQETT*GLGPQS
Trigger: GCTTTGGGGACCTAGACCTCAGGTGGTCTCTTGGTG...TAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGAGGCCAGCCCGCTCTaGGCGTCCAGCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: YLASELSFQVSLLEAAHKEASPL*ASSQLR
Trigger: CCTCAACTGGCTGGACGCGCAGAGCGGGCTGGCCTC...CTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GGGGAGCAAGCCCTGAAGTGCTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGGGGGCATCCCAGGTCTaGCTCTGCTCCTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GEQALKCFITLPLSLVSRGASQV*LCSCGQ
Trigger: TTGGCCACAGGAGCAGAGGCAGACCTGGGATGCCCC...CCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGGAAGCTGGGCTCTTaGCATGCCAGTAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QCSGEMLRSVRKLGSCHARKLGS*HASSLL
Trigger: AAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCT...GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTTGCGCTCCGTCGAGCTGCTAGCACAGTaGAGTGGAGAAATGTTGCGC +
Preference number: 4 (lower is better)
Translates to: RGPAELLAQCSGEMLRSVELLAQ*SGEMLR
Trigger: GCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTC...GACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCTTGGGAGCTGCTAGCACAGTaGAGTGGAGAAATGTTGCGC +
Preference number: 4 (lower is better)
Translates to: APSGSWALAMPVACLRPWELLAQ*SGEMLR
Trigger: GCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTC...CCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCCACCTCATCTGCACCTaGCCCTTCAGACGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLVQFQGCRQCLEALSSHLICT*PFRRFL
Trigger: CAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTG...GCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCCTCCTGAGGGTCAACTaGAGTCTGGCTGGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSLVQFQGCRQCLEALSSLLRVN*SLAGVD
Trigger: GTCCACACCAGCCAGACTCCAGTTGACCCTCAGGAG...GCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ATCTCACAGGTGGGGTTGGTGAAGGCAGACAAGGGCAGAGTGATTCGCTGCATCCTCCCCGTCTATCCCTaGTTCAGTTCCAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISQVGLVKADKGRVIRCILPVYP*FSSRGA
Trigger: TGCACCCCTGGAACTGAACCAGGGATAGACGGGGAG...GATGCAGCGAATCACTCTGCCCTTGTCTGCCTTCACCAACCCCACCTGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441972.5
CDS-3UTR CCA 90 bp TGTCTCCATCCACAGACAAAATCTGCTCCAAGGGATGGACAAGGAGCACTGTTACCCTGGGCCCAGGCCTaGCCCACGGTTGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CLHPQTKSAPRDGQGALLPWAQA*PTVVKA
Trigger: TGCCTTGACAACCGTGGGCCAGGCCTGGGCCCAGGG...TAACAGTGCTCCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGATGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCGCTCCGTCAGGAAGCTaGGCTCTTGCCATGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LSLVQFQGCRQCLEALSSAPSGS*ALAMPV
Trigger: TACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGC...GCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp ATCTCACAGGTGGGGTTGGTGAAGGCAGACAAGGGCAGAGTGATTCGCTGCATCCAGACAAGGGCAGAGTaGTTCGCTGCATCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ISQVGLVKADKGRVIRCIQTRAE*FAASPS
Trigger: AGAGGGAGATGCAGCGAATCACTCTGCCCTTGTCTG...GATGCAGCGAATCACTCTGCCCTTGTCTGCCTTCACCAACCCCACCTGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441972.5
CDS-3UTR TCA 90 bp CTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCCACAGGTGGGGTTGGTaGAGGCAGACAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LASELSFQVSLLEAAHKAHRWGW*RQTRAE
Trigger: CTCTGCCCTTGTCTGCCTTCACCAACCCCACCTGTG...GGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTCAGCCCACAGGGCGACCTGCCCTTGTTATaGTGTTCTGGTAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: WTRSTVRTLPSLTLSPQGDLPLL*CSGKQP
Trigger: AGGCTGTTTACCAGAACAGCATAACAAGGGCAGGTC...GCCCTGTGGGCTGAGGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGGTTGCTGACGAGGAATaGTTGTACCCAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: ELPVYPWFSSRGAGNVWKVADEE*LYPGQQ
Trigger: CTGTTGGCCTGGGTACAAGCATTCCTCGTCAGCAAC...CTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGGGCAGTAACTGTGATTaGCGGCCCCCGACACGGGGG +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKGSNCD*RPPTRG
Trigger: CCCCCGTGTCGGGGGCCGGCAATCACAGTTACTGCC...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp TCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTCTATGGCTAGGAGCTaGCAAGGCCTCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SAPRDGQGALLGPYPALPSMARS*QGLLSV
Trigger: CACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGA...GGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TGTGACCCTAGCCCCAGTGCCCTACAGGAAGGTGCTGACCTGGACGCCCGCAGGATTTCCCACACTATATaGAGGTGTCAGAATGAGGTA +
Preference number: 4 (lower is better)
Translates to: CDPSPSALQEGADLDARRISHTI*RCQNEV
Trigger: TACCTCATTCTGACACCTGCATATAGTGTGGGAAAT...CCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGGGCACTGGGGCTAGGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTACACCTCATCTGCACCTaGCCCTTCAGACGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TRLHIGQWKGSGKEALWLHLICT*PFRRFL
Trigger: CAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTG...TAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGGAGCGGGCAGGGCGTTaGCAGGAGCGAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKERAGR*QERTPA
Trigger: TGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTC...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp AGGTCACTATCCATCCCTGAAGAGAAACTGGGGCATCCCAGGTCTGCCTCTGCTGGAGTCTGGCTGGTGTaGACCACGACAGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RSLSIPEEKLGHPRSASAGVWLV*TTTVFS
Trigger: TGAGAAGACTGTCGTGGTCCACACCAGCCAGACTCC...AGCAGAGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGATGGATAGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTACTAGCTGTAGGAGGGTaGGCTGTCCTGCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: TRLHIGQWKGSGKEALWLLAVGG*AVLHQC
Trigger: ACACTGGTGCAGGACAGCCCACCCTCCTACAGCTAG...TAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGATCTGCTCCAAGGGATaGACAAGGAGCACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: VQWRNVALRQEAGLLPCQICSKG*TRSTVR
Trigger: CCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGAT...CTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGACTCCCCGTCTATCCCTaGTTCAGTTCCAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGLPVYP*FSSRGA
Trigger: TGCACCCCTGGAACTGAACCAGGGATAGACGGGGAG...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGTCACTATCCATCCCTGAAGAGAAACTGGGGCATCCCAGGTCTGCCTCTGCTAACCCGTCTCCACATTaGGCAGTGGAAGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RSLSIPEEKLGHPRSASANPSPH*AVEGFW
Trigger: CCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTT...AGCAGAGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGATGGATAGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CAA 72 bp CTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTaGGAAGCCCTTAGCAGCAGCATCACTGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSLVQFQGCRQC*EALSSSITVGA
Trigger: AGCTCCCACAGTGATGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CAA 72 bp CTGGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCTaGGGCAAGTCACTTTTTCCTCTCTGGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LGSCHASSLLTT*GKSLFPLWGPV
Trigger: CACAGGACCCCAGAGAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGACAGACAAGGGCAGAGTaGTTCGCTGCATCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGQTRAE*FAASPS
Trigger: AGAGGGAGATGCAGCGAATCACTCTGCCCTTGTCTG...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp TGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTTTGGGGAGCAAGCCCTaGAGTGCTTTATTACCTTGC +
Preference number: 4 (lower is better)
Translates to: CSGEMLRSVRKLGSCHASLGSKP*SALLPC
Trigger: GCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCCAA...ACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCCCTTGCAGTCAGACCTaGCCTTGTTATGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RPGPRLSRHIIASKLKHTPCSQT*PCYAVL
Trigger: CAGAACAGCATAACAAGGGCAGGTCTGACTGCAAGG...GGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGAGGCCAACAGCATCCTTaGCTCCTTCGTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGGQQHP*LLRLAG
Trigger: ACCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCC...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp ATCTCACAGGTGGGGTTGGTGAAGGCAGACAAGGGCAGAGTGATTCGCTGCATCGTTGCTGACGAGGAATaGTTGTACCCAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: ISQVGLVKADKGRVIRCIVADEE*LYPGQQ
Trigger: CTGTTGGCCTGGGTACAAGCATTCCTCGTCAGCAAC...GATGCAGCGAATCACTCTGCCCTTGTCTGCCTTCACCAACCCCACCTGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441972.5
CDS-3UTR GCA 90 bp CTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTGAGGCCAGCCCGCTCTaGGCGTCCAGCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LYYLASELSFQVSLLEAAEASPL*ASSQLR
Trigger: CCTCAACTGGCTGGACGCGCAGAGCGGGCTGGCCTC...AGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AGGTCACTATCCATCCCTGAAGAGAAACTGGGGCATCCCAGGTCTGCCTCTGCTGTTCAGTTCCAGGGGTaGAGGCAATGTTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RSLSIPEEKLGHPRSASAVQFQG*RQCLEA
Trigger: GGCTTCCAAACATTGCCTGCACCCCTGGAACTGAAC...AGCAGAGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGATGGATAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CTTCTGTACAAACTCGTTTCCAGTTCTCAGAGGTCAGTAGGGAGTTCCATCCCAGGGGCATCCCAGGTCTaGCTCTGCTCCTGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLYKLVSSSQRSVGSSIPGASQV*LCSCGQ
Trigger: TTGGCCACAGGAGCAGAGGCAGACCTGGGATGCCCC...TGGGATGGAACTCCCTACTGACCTCTGAGAACTGGAAACGAGTTTGTACAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CTCTTGAGTGTGACATCACAGGTTAGAGGCCCTGCTGAGCTGCTAGCACAGTGCTCCCAGCTAGCTTGCTaGAGCGCGAGCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLSVTSQVRGPAELLAQCSQLAC*SASCFS
Trigger: TGAAAAACAGCTCGCGCTGCAGCAAGCTAGCTGGGA...GCACTGTGCTAGCAGCTCAGCAGGGCCTCTAACCTGTGATGTCACACTCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGCTGGGAGGTGGTCTCTaGACAGCGCAGGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKLGGGL*TAQVLA
Trigger: TGCGAGGACCTGCGCTGTCCAGAGACCACCTCCCAG...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp AGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGTATAATTCCCATAGGTTAGCTCTGGGAGGTGGTCTCTaGACAGCGCAGGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SLLEAAHKAPQYNSHRLALGGGL*TAQVLA
Trigger: TGCGAGGACCTGCGCTGTCCAGAGACCACCTCCCAG...AGCTAACCTATGGGAATTATACTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGAAGGCTGGCAGGGCCTaGGAGGTGGTCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: YLASELSFQVSLLEAAHKKAGRA*EVVSGQ
Trigger: CTGTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTT...CTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGAAGGCTGGCAGGGCCTaGGAGGTGGTCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKKAGRA*EVVSGQ
Trigger: CTGTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTT...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGGGTCCTTTTTCTCCTTaGAGTTCATCCGCACCCGCT +
Preference number: 4 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARGPFSP*SSSAPA
Trigger: AGCGGGTGCGGATGAACTCCAAGGAGAAAAAGGACC...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCGGTGCAGGCAATGTTTaGAAGCCCTTAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSLVQFQGCRQCLEALSSGAGNV*KPLAAA
Trigger: TGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACC...GCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTTCCCTGAAGAGAAACTaGGGCATCCCAGGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EGFWKGSSMARSCQGLLSSLKRN*GIPGLP
Trigger: AGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGA...ACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CACATCATTGCCAGCAAGCTGAAGCATACCAGCAGCCACAACCTAGATCTCATTAGGAAGGTGCTGACCTaGACGCCCGCAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: HIIASKLKHTSSHNLDLIRKVLT*TPAGPP
Trigger: AGGTGGTCCTGCGGGCGTCCAGGTCAGCACCTTCCT...AATGAGATCTAGGTTGTGGCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
3UTR CAA 72 bp TCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTaGCTTACGACCTTGGGCAAGTCACTTTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SVRKLGSCHASS*LTTLGKSLFPL
Trigger: GAGAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp AGAGGCCCTGCTGAGCTGCTAGCACAGTGCAGTGGAGAAATGTTGCGCTCCGTCCCCAACCCAAAGTTCTaGCTTCTGTACAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: RGPAELLAQCSGEMLRSVPNPKF*LLYKLV
Trigger: AACGAGTTTGTACAGAAGTCAGAACTTTGGGTTGGG...GACGGAGCGCAACATTTCTCCACTGCACTGTGCTAGCAGCTCAGCAGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CAGTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCTCTTTGATTGCTTTATaGGTTAGGGGCTGTGACCCT +
Preference number: 4 (lower is better)
Translates to: QCSGEMLRSVRKLGSCHASLIAL*VRGCDP
Trigger: AGGGTCACAGCCCCTAACTCATAAAGCAATCAAAGA...GGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCGAGGCCAGCCCGCTCTaGGCGTCCAGCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLEASPL*ASSQLR
Trigger: CCTCAACTGGCTGGACGCGCAGAGCGGGCTGGCCTC...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCCACTGGCTGCACAGCTaGCGCCTCACTCCGAGCGGG +
Preference number: 4 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLHWLHS*RLTPSG
Trigger: CCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTG...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp TCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGCATCACTGTGGGAGCTaGCACTGTCTCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: SELSFQVSLLEAAHKAPQHHCGS*HCLHPQ
Trigger: CTGTGGATGGAGACAGTGGCAGCTCCCACAGTGATG...CTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAGCAGGGCCTGGGAGGTaGTCTCTGGACAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVAGPGR*SLDSAG
Trigger: ACCTGCGCTGTCCAGAGACCACCTCCCAGGCCCTGC...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp AGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCTTGGGCAAGTCACCTTCAGACGCTTCCTaGATTTCTGTCGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RKLGSCHASSLLTTLGKSPSDAS*ISVVKA
Trigger: AGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGG...TGACTTGCCCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGGCTGATCCCAATCACTaGCTGCACAGCTGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKADPNH*LHSCRL
Trigger: GAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGC...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp GAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTGGTCCTTTTTCTCCTTaGAGTTCATCCGCACCCGCT +
Preference number: 4 (lower is better)
Translates to: EGFWKGSSMARSCQGLLSGPFSP*SSSAPA
Trigger: AGCGGGTGCGGATGAACTCCAAGGAGAAAAAGGACC...ACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGCAACTGGAGTCTGGCTaGTGTGGACCACGACAGTCT +
Preference number: 4 (lower is better)
Translates to: SELSFQVSLLEAAHKAPQQLESG*CGPRQS
Trigger: AGACTGTCGTGGTCCACACCAGCCAGACTCCAGTTG...CTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TGTCTCCATCCACAGACAAAATCTGCTCCAAGGGATGGACAAGGAGCACTGTTAAAGCACAGAGGAGCCTaGGGGAGCTCCCCGTCTATC +
Preference number: 4 (lower is better)
Translates to: CLHPQTKSAPRDGQGALLKHRGA*GSSPSI
Trigger: GATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT...TAACAGTGCTCCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGATGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCAGCATCACTGTGCCTTCGTCTTGCAGGTaGTTGAACGACCAGTGTTTA +
Preference number: 4 (lower is better)
Translates to: QFQGCRQCLEALSSSITVPSSCR*LNDQCL
Trigger: TAAACACTGGTCGTTCAATCACCTGCAAGACGAAGG...CACAGTGATGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTATCCGCACCCGCTGGCTaGTCCCAATCACTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVSAPAG*SQSLAA
Trigger: TGCAGCCAGTGATTGGGATCAGCCAGCGGGTGCGGA...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR TCA 90 bp ATAGAAAGCCCCACTAACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGCCCACAGTGGAGACTaGGGCCATCTTAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: IESPTNPSPHWAVEGFWKAHSGD*GHLSKA
Trigger: TGCTTTACTAAGATGGCCTCAGTCTCCACTGTGGGC...TTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTTAGTGGGGCTTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCGCCCACAGTGGAGACTaGGGCCATCTTAGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LASELSFQVSLLEAAHKAAHSGD*GHLSKA
Trigger: TGCTTTACTAAGATGGCCTCAGTCTCCACTGTGGGC...GGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCGTCACTATCCATCCCTaGAGAGAAACTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LASELSFQVSLLEAAHKAVTIHP*RETGAS
Trigger: GGATGCCCCAGTTTCTCTTCAGGGATGGATAGTGAC...GGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGGACCTGCCCTTGTTATaGTGTTCTGGTAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: PSPHWAVEGFWKGSSMARDLPLL*CSGKQP
Trigger: AGGCTGTTTACCAGAACAGCATAACAAGGGCAGGTC...CCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTGGCAGAGTGATTCGCTaGATCTCCCTCTCACATACT +
Preference number: 4 (lower is better)
Translates to: EGFWKGSSMARSCQGLLSGRVIR*ISLSHT
Trigger: AGTATGTGAGAGGGAGATGCAGCGAATCACTCTGCC...ACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp AAGCACAGAGGAGCCTGGGGGAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGAAGTGGAATGCTCAGTaGAATTCTTCCTTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: KHRGAWGSSPSIPGSVPGKWNAQ*NSSFPY
Trigger: ATAAGGAAAGGAAGAATTGCACTGAGCATTCCACTT...CCCTGGAACTGAACCAGGGATAGACGGGGAGCTCCCCCAGGCTCCTCTGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGAGCAAGCCCTGAAGTaGTTTATTACCTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PVYPWFSSRGAGNVWKPLEQALK*FITLPL
Trigger: CAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTC...TAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTGTGACATCACAGGTTCCTTCAGACGCTTCCTaGATTTCTGTCGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GSSMARSCQGLLSVTSQVPSDAS*ISVVKA
Trigger: AGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGG...AACCTGTGATGTCACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGGGTCAACTGGAGTCTaGCTGGTGTGGACCACGACA +
Preference number: 4 (lower is better)
Translates to: YLASELSFQVSLLEAAHKGSTGV*LVWTTT
Trigger: TGTCGTGGTCCACACCAGCCAGACTCCAGTTGACCC...CTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ATATTCTCTTCTCCAGCATCACTAACACCAAGAGACCACCTGAGGTCTAGGTCCCTCCTGAGGGTCAACTaGAGTCTGGCTGGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: IFSSPASLTPRDHLRSRSLLRVN*SLAGVD
Trigger: GTCCACACCAGCCAGACTCCAGTTGACCCTCAGGAG...GGACCTAGACCTCAGGTGGTCTCTTGGTGTTAGTGATGCTGGAGAAGAGAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGGTCACTATCCATCCCTGAAGAGAAACTGGGGCATCCCAGGTCTGCCTCTGCTGCTTGCTTACGACCTTaGGCAAGTCACTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSLSIPEEKLGHPRSASAACLRP*ASHFFL
Trigger: GAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGC...AGCAGAGGCAGACCTGGGATGCCCCAGTTTCTCTTCAGGGATGGATAGTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGTATAATTCCCATAGGTTAGCTGCTCCGTCAGGAAGCTaGGCTCTTGCCATGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SLLEAAHKAPQYNSHRLAAPSGS*ALAMPV
Trigger: TACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGC...AGCTAACCTATGGGAATTATACTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAGGTGGGGTTGGTaGAGGCAGACAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LYYLASELSFQVSLLEAAHRWGW*RQTRAE
Trigger: CTCTGCCCTTGTCTGCCTTCACCAACCCCACCTGTG...AGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp AGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCCTTACCTGTGCAAAATaGAGACAGGTCACTATCCAT +
Preference number: 4 (lower is better)
Translates to: RPGPRLSRHIIASKLKHTLTCAK*RQVTIH
Trigger: ATGGATAGTGACCTGTCTTCATTTTGCACAGGTAAG...GGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp TCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGTTGGGGAGCAAGCCCTaGAGTGCTTTATTACCTTGC +
Preference number: 4 (lower is better)
Translates to: SELSFQVSLLEAAHKAPQLGSKP*SALLPC
Trigger: GCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCCAA...CTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp AAGTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATCCTACAGGAAGGTGCTaGCCTGGACGCCCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KSNAEQFPTLYAGVRMRYPTGRC*PGRPQD
Trigger: GTCCTGCGGGCGTCCAGGTCAGCACCTTCCTGTAGG...ATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp ATATTCTCTTCTCCAGCATCACTAACACCAAGAGACCACCTGAGGTCTAGGTCCGGCCAACAGCATCCTTaGCTCCTTCGTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: IFSSPASLTPRDHLRSRSGQQHP*LLRLAG
Trigger: ACCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCC...GGACCTAGACCTCAGGTGGTCTCTTGGTGTTAGTGATGCTGGAGAAGAGAATAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAGCAGGAGCGAACACCTaGACCTCATCTGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVAGANT*TSSAPG
Trigger: GCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGC...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp CTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTTCCTGCACCAGTGTCTaGATGGGCTCCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LYYLASELSFQVSLLEAASCTSV*MGSCPL
Trigger: CAGTGGGCAGGAGCCCATGCAGACACTGGTGCAGGA...AGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTGCCATCCCTTGACCTaGTTTACCTTAACCATGAAT +
Preference number: 4 (lower is better)
Translates to: SAPRDGQGALLGPYPALPCHPLT*FTLTMN
Trigger: ATTCATGGTTAAGGTAAAGCAGGTCAAGGGATGGCA...GGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCCTACTCTCTTACCTGTaGAAAATGAAGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: AVEGFWKGSSMARSCQGLLLSYL*KMKTGH
Trigger: GTGACCTGTCTTCATTTTGCACAGGTAAGAGAGTAG...GAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp ACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGAGCAAGCCCTGAAGTaGTTTATTACCTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRLHIGQWKGSGKEALWLEQALK*FITLPL
Trigger: CAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTC...TAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp GCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTAGCTTGCTTACGACCTTGGTATCCTCTTCCTAAGTaGAATGCTCAGTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: APSGSWALAMPVACLRPWYPLPK*NAQCNS
Trigger: AGAATTGCACTGAGCATTCCACTTAGGAAGAGGATA...CCAAGGTCGTAAGCAAGCTACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CACATCATTGCCAGCAAGCTGAAGCATACCAGCAGCCACAACCTAGATCTCATTAACCCGTCTCCACATTaGGCAGTGGAAGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HIIASKLKHTSSHNLDLINPSPH*AVEGFW
Trigger: CCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTT...AATGAGATCTAGGTTGTGGCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TGTCTCCATCCACAGACAAAATCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGTCCCCAAAGCAGATaGCTCCATAGAAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CLHPQTKSAPRDGQGALLGPQSR*LHRKPH
Trigger: GTGGGGCTTTCTATGGAGCCATCTGCTTTGGGGACC...TAACAGTGCTCCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGATGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp GGGGAGCAAGCCCTGAAGTGCTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGCCTTCGTCTTGCAGGTaGTTGAACGACCAGTGTTTA +
Preference number: 4 (lower is better)
Translates to: GEQALKCFITLPLSLVSRPSSCR*LNDQCL
Trigger: TAAACACTGGTCGTTCAATCACCTGCAAGACGAAGG...CCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTTCTGTACAAACTCGTTTCCAGTTCTCAGAGGTCAGTAGGGAGTTCCATCCCACTAGGAGCATGTTGCTaGCGAGGAATGCTTGTACCC +
Preference number: 4 (lower is better)
Translates to: LLYKLVSSSQRSVGSSIPLGACC*RGMLVP
Trigger: GGGTACAAGCATTCCTCGTCAGCAACATGCTCCTAG...TGGGATGGAACTCCCTACTGACCTCTGAGAACTGGAAACGAGTTTGTACAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp GGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTGTGACATCACAGGTTCCCAACCCAAAGTTCTaGCTTCTGTACAAACTCGTT +
Preference number: 4 (lower is better)
Translates to: GSSMARSCQGLLSVTSQVPNPKF*LLYKLV
Trigger: AACGAGTTTGTACAGAAGTCAGAACTTTGGGTTGGG...AACCTGTGATGTCACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp ATATTCTCTTCTCCAGCATCACTAACACCAAGAGACCACCTGAGGTCTAGGTCCGTCACTATCCATCCCTaGAGAGAAACTGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: IFSSPASLTPRDHLRSRSVTIHP*RETGAS
Trigger: GGATGCCCCAGTTTCTCTTCAGGGATGGATAGTGAC...GGACCTAGACCTCAGGTGGTCTCTTGGTGTTAGTGATGCTGGAGAAGAGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTATCCTCCCGGTACAGGTaGCCGTTGTCCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVSSRYR*PLSQKQ
Trigger: CTGTTTCTGGGACAACGGCCACCTGTACCGGGAGGA...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGGGTCCTTTTTCTCCTTaGAGTTCATCCGCACCCGCT +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKGPFSP*SSSAPA
Trigger: AGCGGGTGCGGATGAACTCCAAGGAGAAAAAGGACC...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR TCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAAGGAGTAGCCCAAGATaGTGCCAGCTCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVRSSPR*CQLRWQ
Trigger: TTGCCATCGGAGCTGGCATCATCTTGGGCTACTCCT...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAGGCCAACAGCATCCTTaGCTCCTTCGTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVGQQHP*LLRLAG
Trigger: ACCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCC...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGACTACTCTCTTACCTGTaGAAAATGAAGACAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGLLSYL*KMKTGH
Trigger: GTGACCTGTCTTCATTTTGCACAGGTAAGAGAGTAG...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCCACCTCATCTGCACCTaGCCCTTCAGACGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLHLICT*PFRRFL
Trigger: CAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTG...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCTTCATCCGCACCCGCTaGCTGATCCCAATCACTGGC +
Preference number: 4 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLFIRTR*LIPITG
Trigger: GCCAGTGATTGGGATCAGCCAGCGGGTGCGGATGAA...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp CTTCTGTACAAACTCGTTTCCAGTTCTCAGAGGTCAGTAGGGAGTTCCATCCCAATCTGCTCCAAGGGATaGACAAGGAGCACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: LLYKLVSSSQRSVGSSIPICSKG*TRSTVR
Trigger: CCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGAT...TGGGATGGAACTCCCTACTGACCTCTGAGAACTGGAAACGAGTTTGTACAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTACTAGGAGCATGTTGCTaGCGAGGAATGCTTGTACCC +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVLGACC*RGMLVP
Trigger: GGGTACAAGCATTCCTCGTCAGCAACATGCTCCTAG...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAGTTGCTGACGAGGAATaGTTGTACCCAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVVADEE*LYPGQQ
Trigger: CTGTTGGCCTGGGTACAAGCATTCCTCGTCAGCAAC...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp AGCCTCTTAGAAGCAGCTCACAAGGCCCCACAGTATAATTCCCATAGGTTAGCTTCCACAGACAAAATCTaGTCCAAGGGATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: SLLEAAHKAPQYNSHRLASTDKI*SKGWTR
Trigger: CCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGA...AGCTAACCTATGGGAATTATACTGTGGGGCCTTGTGAGCTGCTTCTAAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGAATTTCCCACACTATATaGAGGTGTCAGAATGAGGTA +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGISHTI*RCQNEV
Trigger: TACCTCATTCTGACACCTGCATATAGTGTGGGAAAT...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TTTCAATGCCATCCCTTGACCTGCTTTACCTTAACCATGAATAACAGTGTATGCTCCTCCCGGTACAGGTaGCCGTTGTCCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: FQCHPLTCFTLTMNNSVCSSRYR*PLSQKQ
Trigger: CTGTTTCTGGGACAACGGCCACCTGTACCGGGAGGA...GCATACACTGTTATTCATGGTTAAGGTAAAGCAGGTCAAGGGATGGCATTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp TGTCTCCATCCACAGACAAAATCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGCTTGCTTACGACCTTaGGCAAGTCACTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CLHPQTKSAPRDGQGALLACLRP*ASHFFL
Trigger: GAGGAAAAAGTGACTTGCCCAAGGTCGTAAGCAAGC...TAACAGTGCTCCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGATGGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp TGCTCCTGTGGCCAAAGGCGGAGCAGATCCTTCTCTATCCTCTTCCTAAGTGGACTCTCACATACTTTCTaGTCATGCTGTTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: CSCGQRRSRSFSILFLSGLSHTF*SCCSFK
Trigger: TTTGAAAGAACAGCATGATCAGAAAGTATGTGAGAG...TCCACTTAGGAAGAGGATAGAGAAGGATCTGCTCCGCCTTTGGCCACAGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTACCTTGCAGTCAGACCTaGCCTTGTTATGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVPCSQT*PCYAVL
Trigger: CAGAACAGCATAACAAGGGCAGGTCTGACTGCAAGG...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp ACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAAAGTGGAATGCTCAGTaGAATTCTTCCTTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: TRLHIGQWKGSGKEALWLKWNAQ*NSSFPY
Trigger: ATAAGGAAAGGAAGAATTGCACTGAGCATTCCACTT...TAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp ACTCGTTTCCAGTTCTCAGAGGTCAGTAGGGAGTTCCATCCCAAATATTTTAAAGCAGTGGAGAAATGTTaGGCTCCGTCAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TRFQFSEVSREFHPKYFKAVEKC*APSGSW
Trigger: CCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGC...TTTAAAATATTTGGGATGGAACTCCCTACTGACCTCTGAGAACTGGAAACGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp ATAGAAAGCCCCACTAACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAATATCCTCTTCCTAAGTaGAATGCTCAGTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: IESPTNPSPHWAVEGFWKYPLPK*NAQCNS
Trigger: AGAATTGCACTGAGCATTCCACTTAGGAAGAGGATA...TTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTTAGTGGGGCTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTACCTTCGTCTTGCAGGTaGTTGAACGACCAGTGTTTA +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVPSSCR*LNDQCL
Trigger: TAAACACTGGTCGTTCAATCACCTGCAAGACGAAGG...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAGACCTGCCCTTGTTATaGTGTTCTGGTAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVDLPLL*CSGKQP
Trigger: AGGCTGTTTACCAGAACAGCATAACAAGGGCAGGTC...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp AAGTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATGTTCAGTTCCAGGGGTaGAGGCAATGTTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KSNAEQFPTLYAGVRMRYVQFQG*RQCLEA
Trigger: GGCTTCCAAACATTGCCTGCACCCCTGGAACTGAAC...ATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR GCA 90 bp GTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATATTCTATGGCTAGGAGCTaGCAAGGCCTCTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: VKCRAISHTICRCQNEVYSMARS*QGLLSV
Trigger: CACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGA...ATATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CCA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCCCTTCAGACGCTTCCTaGATTTCTGTCGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLPSDAS*ISVVKA
Trigger: AGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGG...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CCA 90 bp GTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATATGGTGCAGGCAATGTTTaGAAGCCCTTAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VKCRAISHTICRCQNEVYGAGNV*KPLAAA
Trigger: TGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACC...ATATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTAGAAAGCCACAAAGTTTaGCTTTGTGTACCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVESHKV*LCVPSS
Trigger: GGAGGAAGGTACACAAAGTCAAACTTTGTGGCTTTC...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR TCA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGCAAGTCTCTACATCTTaGGCTGATTTTCAACATCTT +
Preference number: 4 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKQVSTS*ADFQHL
Trigger: AAGATGTTGAAAATCAGCTCAAGATGTAGAGACTTG...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp CTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGTTAGCCTCTTAGAAGCAGCTTGCCATCCCTTGACCTaGTTTACCTTAACCATGAAT +
Preference number: 4 (lower is better)
Translates to: LYYLASELSFQVSLLEAACHPLT*FTLTMN
Trigger: ATTCATGGTTAAGGTAAAGCAGGTCAAGGGATGGCA...AGCTGCTTCTAAGAGGCTAACCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR TCA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTACTCTACATCTTGAGCTaGTTTTCAACATCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVLYILS*FSTSCF
Trigger: GAAGCAAGATGTTGAAAATCAGCTCAAGATGTAGAG...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR GCA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCTCTTCATTTGTAAAATaGGGAACAAGAACATCCCTC +
Preference number: 4 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLSSFVK*GTRTSL
Trigger: GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGA...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR TCA 90 bp TTTCAATGCCATCCCTTGACCTGCTTTACCTTAACCATGAATAACAGTGTATGCCTCTCACATACTTTCTaGTCATGCTGTTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: FQCHPLTCFTLTMNNSVCLSHTF*SCCSFK
Trigger: TTTGAAAGAACAGCATGATCAGAAAGTATGTGAGAG...GCATACACTGTTATTCATGGTTAAGGTAAAGCAGGTCAAGGGATGGCATTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS TCA 90 bp GCAGGTCCTCGCAAGGCCGTTTCTCAGGGACGCCGGCCTCGCCACTaGCGTAGCACCAGGGCCCGCGCGGGTCCTCGTCCGGGTTTCGGC +
Preference number: 5 (lower is better)
Translates to: AGPRKAVSQGRRPRH*RSTRARAGPRPGFG
Trigger: GCCGAAACCCGGACGAGGACCCGCGCGGGCCCTGGTGCTACGTCAGTGGCGAGGCCGGCGTCCCTGAGAAACGGCCTTGCGAGGACCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS CCA 90 bp GCGTCCAGCCAGTTGAGGCAGCGGAGGCCCGGCGCGGGGGAGGTCTaGTCCTCCCGGTACAGGTGGCCGTTGTCCCAGAAACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ASSQLRQRRPGAGEV*SSRYRWPLSQKQPP
Trigger: TGGAGGCTGTTTCTGGGACAACGGCCACCTGTACCGGGAGGACCAGACCTCCCCCGCGCCGGGCCTCCGCTGCCTCAACTGGCTGGACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS GCA 90 bp GTTCATCCGCACCCGCTGGCTGATCCCAATCACTGGCTGCACAGCTaGCGCCTCACTCCGAGCGGGCAGGGCGTTGGCAGGAGCGAACAC +
Preference number: 5 (lower is better)
Translates to: VHPHPLADPNHWLHS*RLTPSGQGVGRSEH
Trigger: GTGTTCGCTCCTGCCAACGCCCTGCCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGCCAGCGGGTGCGGATGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS GCA 90 bp GCCGCCTCACTCCGAGCGGGCAGGGCGTTGGCAGGAGCGAACACCTaGACCTCATCTGCACCTGGCCCTTCAGACGCTTCCTGGATTTCT +
Preference number: 5 (lower is better)
Translates to: AASLRAGRALAGANT*TSSAPGPSDASWIS
Trigger: AGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCGGAGTGAGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CCA 90 bp TTTCTCCTTGGAGTTCATCCGCACCCGCTGGCTGATCCCAATCACTaGCTGCACAGCTGCCGCCTCACTCCGAGCGGGCAGGGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: FLLGVHPHPLADPNH*LHSCRLTPSGQGVG
Trigger: GCCAACGCCCTGCCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGCCAGCGGGTGCGGATGAACTCCAAGGAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS GCA 90 bp CCGAGCGGGCAGGGCGTTGGCAGGAGCGAACACCTGCACCTCATCTaGACCTGGCCCTTCAGACGCTTCCTGGATTTCTGTCGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: PSGQGVGRSEHLHLI*TWPFRRFLDFCREG
Trigger: GCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS-3UTR CAA 90 bp TCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTTAACCGAGGCCCCCTaGGCGGCGGCTCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SAPRDGQGALLGPYPALPLTEAP*AAALPP
Trigger: GGGAGGCAGAGCCGCCGCCAAGGGGGCCTCGGTTAA...GGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS TCA 90 bp CCTCATCTGCACCTGGCCCTTCAGACGCTTCCTGGATTTCTGTCGTaGAGGCTGGCAGGGCCTGGGAGGTGGTCTCTGGACAGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PHLHLALQTLPGFLS*RLAGPGRWSLDSAG
Trigger: ACCTGCGCTGTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
CDS CCA 90 bp GGGCAGGGCGTTGGCAGGAGCGAACACCTGCACCTCATCTGCACCTaGCCCTTCAGACGCTTCCTGGATTTCTGTCGTGAAGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GQGVGRSEHLHLICT*PFRRFLDFCREGWQ
Trigger: CTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CCA 90 bp CAAACGACTTCTTCCCGCGGTGTGTGTCAGGGGAGGTTGGGGAGCTaGGGTTGTGAGCAGTGTGGGTCTAGCACACTGCAGACGCTCCGC +
Preference number: 5 (lower is better)
Translates to: QTTSSRGVCQGRLGS*GCEQCGSSTLQTLR
Trigger: GCGGAGCGTCTGCAGTGTGCTAGACCCACACTGCTCACAACCCCAGCTCCCCAACCTCCCCTGACACACACCGCGGGAAGAAGTCGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480654.5
ENST00000493034.1
CDS TCA 90 bp CCTCATCTGCACCTGGCCCTTCAGACGCTTCCTGGATTTCTGTCGTaGAGGCTGGCAGGGCCTGGGAGGTGGTCTCTGGAGATGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PHLHLALQTLPGFLS*RLAGPGRWSLEMRW
Trigger: CCACCTCATCTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480654.5
CDS-3UTR CAA 90 bp GAAGGGTTCTGGAAAGGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTCGAGCGGGCAGGGCGTaGGCAGGAGCGAACACCTGC +
Preference number: 5 (lower is better)
Translates to: EGFWKGSSMARSCQGLLSRAGRA*AGANTC
Trigger: GCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCG...ACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS TCA 90 bp CTTGTACCCAGGCCAACAGCATCCTTGCCTCCTTCGTCTTGCAGGTaGTTGAACGACCAGTGTTTAACCGAGGCCCCCTTGGCGGCGGCT +
Preference number: 5 (lower is better)
Translates to: LVPRPTASLPPSSCR*LNDQCLTEAPLAAA
Trigger: AGCCGCCGCCAAGGGGGCCTCGGTTAAACACTGGTCGTTCAATCACCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCCTGGGTACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS TCA 90 bp CCTCATCTGCACCTGGCCCTTCAGACGCTTCCTGGATTTCTGTCGTaGAGGCTGGCAGGGCCTGGGAGGTGGTCTCTCCCACGTCTTTAT +
Preference number: 5 (lower is better)
Translates to: PHLHLALQTLPGFLS*RLAGPGRWSLPRLY
Trigger: ATAAAGACGTGGGAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493034.1
CDS-3UTR CAA 90 bp TGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGTCGGTACAGGTGGCCGTaGTCCCAGAAACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: CSGEMLRSVRKLGSCHASRYRWP*SQKQPP
Trigger: TGGAGGCTGTTTCTGGGACAACGGCCACCTGTACCG...ACTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp GTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGGGGTGCAGGCAATGTTaGGAAGCCCTTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VQWRNVALRQEAGLLPCQGCRQC*EALSSS
Trigger: GCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCC...CTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp GGAGCTCCCCGTCTATCCCTGGTTCAGTTCCAGGGGTGCAGGCAATGTTTGGAAAGGCCTGGCCCACGGTaGTCAAGGCACATCATTGCC +
Preference number: 5 (lower is better)
Translates to: GAPRLSLVQFQGCRQCLERPGPR*SRHIIA
Trigger: GGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT...TTCCAAACATTGCCTGCACCCCTGGAACTGAACCAGGGATAGACGGGGAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS CCA 90 bp CCTTCAGACGCTTCCTGGATTTCTGTCGTGAAGGCTGGCAGGGCCTaGGAGGTGGTCTCTGGAGATGAGGTGGGAAACAGCTCTCATCAG +
Preference number: 5 (lower is better)
Translates to: PSDASWISVVKAGRA*EVVSGDEVGNSSHQ
Trigger: CTGATGAGAGCTGTTTCCCACCTCATCTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443175.1
ENST00000480654.5
CDS-3UTR CAA 90 bp AGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCAGGCCAACAGCATCCTaGCCTCCTTCGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPGPRLSRHIIASKLKHTRPTAS*PPSSCR
Trigger: CCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCCT...GGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp CACATCATTGCCAGCAAGCTGAAGCATACCAGCAGCCACAACCTAGATCTCATTCGAGCGGGCAGGGCGTaGGCAGGAGCGAACACCTGC +
Preference number: 5 (lower is better)
Translates to: HIIASKLKHTSSHNLDLIRAGRA*AGANTC
Trigger: GCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCG...AATGAGATCTAGGTTGTGGCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGCGAGCGGGCAGGGCGTaGGCAGGAGCGAACACCTGC +
Preference number: 5 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKRAGRA*AGANTC
Trigger: GCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCG...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp GTGCAGTGGAGAAATGTTGCGCTCCGTCAGGAAGCTGGGCTCTTGCCATGCCAGAGGTCCTTTTTCTCCTaGGAGTTCATCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: VQWRNVALRQEAGLLPCQRSFFS*EFIRTR
Trigger: GCGGGTGCGGATGAACTCCAAGGAGAAAAAGGACCT...CTGGCATGGCAAGAGCCCAGCTTCCTGACGGAGCGCAACATTTCTCCACTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp TCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCGGGTGCAGGCAATGTTaGGAAGCCCTTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SAPRDGQGALLGPYPALPGCRQC*EALSSS
Trigger: GCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCC...GGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp GGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCAGCAGCAGCTTCCCAGCTAGCTaGCTGCAGCGCGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: GPRLSRHIIASKLKHTSSSFPAS*LQRELF
Trigger: AAACAGCTCGCGCTGCAGCAAGCTAGCTGGGAAGCT...GCTGCTGGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441972.5
CDS TCA 90 bp GTACCTTCCTCCCCTCCTCCTAAGAGGGCCCAGAAGAGAAGCTACTaGCCTCTTGTAGGAGTAGCCCAAGATGATGCCAGCTCCGATGGC +
Preference number: 5 (lower is better)
Translates to: VPSSPPPKRAQKRSY*PLVGVAQDDASSDG
Trigger: GCCATCGGAGCTGGCATCATCTTGGGCTACTCCTACAAGAGGTCAGTAGCTTCTCTTCTGGGCCCTCTTAGGAGGAGGGGAGGAAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS GCA 90 bp GGCCTGGGAGGTGGTCTCTCCCACGTCTTTATCTGTCCAAATCCTTaGTATTTCCCAAGGCCCCTCTCGGTTGCGTTCTTCTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GLGGGLSHVFICPNP*YFPRPLSVAFFCRG
Trigger: TCCCCTGCAGAAGAACGCAACCGAGAGGGGCCTTGGGAAATAGCAAGGATTTGGACAGATAAAGACGTGGGAGAGACCACCTCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493034.1
CDS-3UTR CAA 90 bp TGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTCAGCCCACAGGGCTCTGCTAGGAGCATGTaGCTGACGAGGAATGCTTGT +
Preference number: 5 (lower is better)
Translates to: WTRSTVRTLPSLTLSPQGSARSM*LTRNAC
Trigger: ACAAGCATTCCTCGTCAGCAACATGCTCCTAGCAGA...GCCCTGTGGGCTGAGGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp TCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTCAGCAGGTCCTTTTTCTCCTaGGAGTTCATCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: SKGWTRSTVRTLPSLTLSRSFFS*EFIRTR
Trigger: GCGGGTGCGGATGAACTCCAAGGAGAAAAAGGACCT...GCTGAGGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp CTCCTAGGCTATGTGACTTTGAGCAAGTCTCTGACAGAGGCTTCTTCATTTGTATTAACCGAGGCCCCCTaGGCGGCGGCTCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLGYVTLSKSLTEASSFVLTEAP*AAALPP
Trigger: GGGAGGCAGAGCCGCCGCCAAGGGGGCCTCGGTTAA...TACAAATGAAGAAGCCTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp ACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAGGAAGCTCTATGGCTAAGGCCAACAGCATCCTaGCCTCCTTCGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: TRLHIGQWKGSGKEALWLRPTAS*PPSSCR
Trigger: CCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCCT...TAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp CAGTTCCAGGGGTGCAGGCAATGTTTGGAAGCCCTTAGCAGCAGCATCACTGTGGCTGACGAGGAATGCTaGTACCCAGGCCAACAGCAT +
Preference number: 5 (lower is better)
Translates to: QFQGCRQCLEALSSSITVADEEC*YPGQQH
Trigger: ATGCTGTTGGCCTGGGTACAAGCATTCCTCGTCAGC...CACAGTGATGCTGCTGCTAAGGGCTTCCAAACATTGCCTGCACCCCTGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp ATAGAAAGCCCCACTAACCCGTCTCCACATTGGGCAGTGGAAGGGTTCTGGAAAAGGCCTGGCCCACGGTaGTCAAGGCACATCATTGCC +
Preference number: 5 (lower is better)
Translates to: IESPTNPSPHWAVEGFWKRPGPR*SRHIIA
Trigger: GGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT...TTTCCAGAACCCTTCCACTGCCCAATGTGGAGACGGGTTAGTGGGGCTTTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp AGGCCTGGCCCACGGTTGTCAAGGCACATCATTGCCAGCAAGCTGAAGCATACCTCTGCTAGGAGCATGTaGCTGACGAGGAATGCTTGT +
Preference number: 5 (lower is better)
Translates to: RPGPRLSRHIIASKLKHTSARSM*LTRNAC
Trigger: ACAAGCATTCCTCGTCAGCAACATGCTCCTAGCAGA...GGTATGCTTCAGCTTGCTGGCAATGATGTGCCTTGACAACCGTGGGCCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS TCA 90 bp AGAAACAGCCTCCAGATCCATAGGCTTCTGCTAGGAGCATGTTGCTaGCGAGGAATGCTTGTACCCAGGCCAACAGCATCCTTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RNSLQIHRLLLGACC*RGMLVPRPTASLPP
Trigger: AGGAGGCAAGGATGCTGTTGGCCTGGGTACAAGCATTCCTCGTCAGCAACATGCTCCTAGCAGAAGCCTATGGATCTGGAGGCTGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS GCA 90 bp AAGGGCTTCTCTCCTACCTCCCACGTCTTTATCTGTCCAAATCCTTaGTATTTCCCAAGGCCCCTCTCGGTTGCGTTCTTCTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: KGFSPTSHVFICPNP*YFPRPLSVAFFCRG
Trigger: TCCCCTGCAGAAGAACGCAACCGAGAGGGGCCTTGGGAAATAGCAAGGATTTGGACAGATAAAGACGTGGGAGGTAGGAGAGAAGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480654.5
CDS-3UTR CAA 90 bp ACTCGTTTCCAGTTCTCAGAGGTCAGTAGGGAGTTCCATCCCAAATATTTTAAATTAACCGAGGCCCCCTaGGCGGCGGCTCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: TRFQFSEVSREFHPKYFKLTEAP*AAALPP
Trigger: GGGAGGCAGAGCCGCCGCCAAGGGGGCCTCGGTTAA...TTTAAAATATTTGGGATGGAACTCCCTACTGACCTCTGAGAACTGGAAACGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp TGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTCAGCCCACAGGGCAAGTGCTTTATTACCTaGCCTCTGAGCTTAGTTTCC +
Preference number: 5 (lower is better)
Translates to: WTRSTVRTLPSLTLSPQGKCFIT*PLSLVS
Trigger: GGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTT...GCCCTGTGGGCTGAGGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS GCA 90 bp CTGCCATTGCCTTTGGTAAATCGCTTAACTTCTCTGAAGCTCAGATaGCTCAAACGACTTCTTCCCGCGGTGTGTGTCAGGGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LPLPLVNRLTSLKLR*LKRLLPAVCVRGGW
Trigger: CCAACCTCCCCTGACACACACCGCGGGAAGAAGTCGTTTGAGGCATCTGAGCTTCAGAGAAGTTAAGCGATTTACCAAAGGCAATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480654.5
ENST00000493034.1
CDS-3UTR CAA 90 bp TCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGGACCCTACCCAGCCTTACCCTTTCAATGCCATCCCTaGACCTGCTTTACCTTAACC +
Preference number: 5 (lower is better)
Translates to: SAPRDGQGALLGPYPALPFQCHP*TCFTLT
Trigger: GGTTAAGGTAAAGCAGGTCAAGGGATGGCATTGAAA...GGGTAAGGCTGGGTAGGGTCCTAACAGTGCTCCTTGTCCATCCCTTGGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp TGTCTCCATCCACAGACAAAATCTGCTCCAAGGGATGGACAAGGAGCACTGTTAGCTGACGAGGAATGCTaGTACCCAGGCCAACAGCAT +
Preference number: 5 (lower is better)
Translates to: CLHPQTKSAPRDGQGALLADEEC*YPGQQH
Trigger: ATGCTGTTGGCCTGGGTACAAGCATTCCTCGTCAGC...TAACAGTGCTCCTTGTCCATCCCTTGGAGCAGATTTTGTCTGTGGATGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp GGGGAGCAAGCCCTGAAGTGCTTTATTACCTTGCCTCTGAGCTTAGTTTCCAGGCAGTCAGACCTGCCCTaGTTATGCTGTTCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: GEQALKCFITLPLSLVSRQSDLP*LCCSGK
Trigger: TTTACCAGAACAGCATAACAAGGGCAGGTCTGACTG...CCTGGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTTCAGGGCTTGCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCCGGTACAGGTGGCCGTaGTCCCAGAAACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLRYRWP*SQKQPP
Trigger: TGGAGGCTGTTTCTGGGACAACGGCCACCTGTACCG...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp GGAAGCTCTATGGCTAGGAGCTGCCAAGGCCTCTTGAGTGTGACATCACAGGTTTTTCAATGCCATCCCTaGACCTGCTTTACCTTAACC +
Preference number: 5 (lower is better)
Translates to: GSSMARSCQGLLSVTSQVFQCHP*TCFTLT
Trigger: GGTTAAGGTAAAGCAGGTCAAGGGATGGCATTGAAA...AACCTGTGATGTCACACTCAAGAGGCCTTGGCAGCTCCTAGCCATAGAGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCAGGCCAACAGCATCCTaGCCTCCTTCGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLRPTAS*PPSSCR
Trigger: CCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCCT...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGTCTGCTAGGAGCATGTaGCTGACGAGGAATGCTTGT +
Preference number: 5 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKSARSM*LTRNAC
Trigger: ACAAGCATTCCTCGTCAGCAACATGCTCCTAGCAGA...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp AAGTCAAATGCAGAGCAATTTCCCACACTATATGCAGGTGTCAGAATGAGGTATCGGTACAGGTGGCCGTaGTCCCAGAAACAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: KSNAEQFPTLYAGVRMRYRYRWP*SQKQPP
Trigger: TGGAGGCTGTTTCTGGGACAACGGCCACCTGTACCG...ATACCTCATTCTGACACCTGCATATAGTGTGGGAAATTGCTCTGCATTTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGCCACAAAGTTTGACTTaGTGTACCTTCCTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKPQSLT*CTFLPS
Trigger: GGAGGGGAGGAAGGTACACAAAGTCAAACTTTGTGG...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCGCTGACGAGGAATGCTaGTACCCAGGCCAACAGCAT +
Preference number: 5 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLADEEC*YPGQQH
Trigger: ATGCTGTTGGCCTGGGTACAAGCATTCCTCGTCAGC...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCAGGTCCTTTTTCTCCTaGGAGTTCATCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLRSFFS*EFIRTR
Trigger: GCGGGTGCGGATGAACTCCAAGGAGAAAAAGGACCT...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp AGGCACCAAAGGAAAGGGTTTGTCCAAGGTCAGCAGATAAAGACTAGGACCAAGCTAGGCTATGTGACTTaGAGCAAGTCTCTGACAGAG +
Preference number: 5 (lower is better)
Translates to: RHQRKGFVQGQQIKTRTKLGYVT*SKSLTE
Trigger: CTCTGTCAGAGACTTGCTCAAAGTCACATAGCCTAG...CTTGGTCCTAGTCTTTATCTGCTGACCTTGGACAAACCCTTTCCTTTGGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp CTTCTGTACAAACTCGTTTCCAGTTCTCAGAGGTCAGTAGGGAGTTCCATCCCAAAGTGCTTTATTACCTaGCCTCTGAGCTTAGTTTCC +
Preference number: 5 (lower is better)
Translates to: LLYKLVSSSQRSVGSSIPKCFIT*PLSLVS
Trigger: GGAAACTAAGCTCAGAGGCAAGGTAATAAAGCACTT...TGGGATGGAACTCCCTACTGACCTCTGAGAACTGGAAACGAGTTTGTACAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215912.10
ENST00000441972.5
CDS-3UTR CAA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCCAGTCAGACCTGCCCTaGTTATGCTGTTCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLQSDLP*LCCSGK
Trigger: TTTACCAGAACAGCATAACAAGGGCAGGTCTGACTG...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS-3UTR CAA 90 bp AAGTCTCTGACAGAGGCTTCTTCATTTGTAAAATGCGGAACAAGAACATCCCTCAGAAAGCCACAAAGTTaGACTTTGTGTACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KSLTEASSFVKCGTRTSLRKPQS*TLCTFL
Trigger: GAGGAAGGTACACAAAGTCAAACTTTGTGGCTTTCT...GAGGGATGTTCTTGTTCCGCATTTTACAAATGAAGAAGCCTCTGTCAGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS TCA 72 bp CGCAAGGCCGTTTCTCAGGGACGCCGGCCTCGCCACTaGCGTAGCACCAGGGCCCGCGCGGGTCCTCGTCCG +
Preference number: 6 (lower is better)
Translates to: RKAVSQGRRPRH*RSTRARAGPRP
Trigger: CGGACGAGGACCCGCGCGGGCCCTGGTGCTACGTCAGTGGCGAGGCCGGCGTCCCTGAGAAACGGCCTTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS GCA 72 bp CACCCGCTGGCTGATCCCAATCACTGGCTGCACAGCTaGCGCCTCACTCCGAGCGGGCAGGGCGTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: HPLADPNHWLHS*RLTPSGQGVGR
Trigger: CCTGCCAACGCCCTGCCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGCCAGCGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CCA 72 bp CAGTTGAGGCAGCGGAGGCCCGGCGCGGGGGAGGTCTaGTCCTCCCGGTACAGGTGGCCGTTGTCCCAGAAA +
Preference number: 6 (lower is better)
Translates to: QLRQRRPGAGEV*SSRYRWPLSQK
Trigger: TTTCTGGGACAACGGCCACCTGTACCGGGAGGACCAGACCTCCCCCGCGCCGGGCCTCCGCTGCCTCAACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS CCA 72 bp GCACAGCTGCCGCCTCACTCCGAGCGGGCAGGGCGTTaGCAGGAGCGAACACCTGCACCTCATCTGCACCTG +
Preference number: 6 (lower is better)
Translates to: AQLPPHSERAGR*QERTPAPHLHL
Trigger: CAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCGGAGTGAGGCGGCAGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CCA 72 bp GGAGTTCATCCGCACCCGCTGGCTGATCCCAATCACTaGCTGCACAGCTGCCGCCTCACTCCGAGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: GVHPHPLADPNH*LHSCRLTPSGQ
Trigger: CTGCCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGCCAGCGGGTGCGGATGAACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CAA 72 bp TGCACAGCTGCCGCCTCACTCCGAGCGGGCAGGGCGTaGGCAGGAGCGAACACCTGCACCTCATCTGCACCT +
Preference number: 6 (lower is better)
Translates to: CTAAASLRAGRA*AGANTCTSSAP
Trigger: AGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCGGAGTGAGGCGGCAGCTGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CAA 90 bp ATCACTGGCTGCACAGCTGCCGCCTCACTCCGAGCGGGCAGGGCGTaGGCAGGAGCGAACACCTGCACCTCATCTGCACCTGGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: ITGCTAAASLRAGRA*AGANTCTSSAPGPS
Trigger: TGAAGGGCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCGGAGTGAGGCGGCAGCTGTGCAGCCAGTGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS TCA 72 bp CACCTGGCCCTTCAGACGCTTCCTGGATTTCTGTCGTaGAGGCTGGCAGGGCCTGGGAGGTGGTCTCTGGAC +
Preference number: 6 (lower is better)
Translates to: HLALQTLPGFLS*RLAGPGRWSLD
Trigger: GTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
CDS TCA 72 bp GAAGGCTGGCAGGGCCTGGGAGGTGGTCTCTGGAGATaGGGTGGGAAACAGCTCTCATCAGGGACTGCCCTG +
Preference number: 6 (lower is better)
Translates to: EGWQGLGGGLWR*GGKQLSSGTAL
Trigger: CAGGGCAGTCCCTGATGAGAGCTGTTTCCCACCTCATCTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443175.1
ENST00000480654.5
CDS TCA 72 bp CACACTGCAGACGCTCCGCAAACGGTCAATAAACGCTaGGGGGCCAAAAGCCACTCCTCAGGACGCGCGGCG +
Preference number: 6 (lower is better)
Translates to: HTADAPQTVNKR*GAKSHSSGRAA
Trigger: CGCCGCGCGTCCTGAGGAGTGGCTTTTGGCCCCTCAGCGTTTATTGACCGTTTGCGGAGCGTCTGCAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480654.5
ENST00000493034.1
CDS TCA 72 bp CACCTGGCCCTTCAGACGCTTCCTGGATTTCTGTCGTaGAGGCTGGCAGGGCCTGGGAGGTGGTCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: HLALQTLPGFLS*RLAGPGRWSLE
Trigger: CTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480654.5
CDS TCA 72 bp CACCTGGCCCTTCAGACGCTTCCTGGATTTCTGTCGTaGAGGCTGGCAGGGCCTGGGAGGTGGTCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: HLALQTLPGFLS*RLAGPGRWSLP
Trigger: TGGGAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493034.1
CDS CCA 72 bp TCTTCCCGCGGTGTGTGTCAGGGGAGGTTGGGGAGCTaGGGTTGTGAGCAGTGTGGGTCTAGCACACTGCAG +
Preference number: 6 (lower is better)
Translates to: SSRGVCQGRLGS*GCEQCGSSTLQ
Trigger: CTGCAGTGTGCTAGACCCACACTGCTCACAACCCCAGCTCCCCAACCTCCCCTGACACACACCGCGGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480654.5
ENST00000493034.1
CDS CCA 72 bp TGCACCTCATCTGCACCTGGCCCTTCAGACGCTTCCTaGATTTCTGTCGTGAAGGCTGGCAGGGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: CTSSAPGPSDAS*ISVVKAGRAWE
Trigger: CTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS GCA 72 bp CAGGGCGTTGGCAGGAGCGAACACCTGCACCTCATCTaGACCTGGCCCTTCAGACGCTTCCTGGATTTCTGT +
Preference number: 6 (lower is better)
Translates to: QGVGRSEHLHLI*TWPFRRFLDFC
Trigger: ACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CAA 90 bp GGGCCTGGGAGGTGGTCTCTCCCACGTCTTTATCTGTCCAAATCCTaGCTATTTCCCAAGGCCCCTCTCGGTTGCGTTCTTCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: GPGRWSLPRLYLSKS*LFPKAPLGCVLLQG
Trigger: CCCCTGCAGAAGAACGCAACCGAGAGGGGCCTTGGGAAATAGCAAGGATTTGGACAGATAAAGACGTGGGAGAGACCACCTCCCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493034.1
CDS TCA 72 bp AGGTGGGAAACAGCTCTCATCAGGGACTGCCCTGAGTaGATTCCACAGCTGAACCTGGCCTGGACAGCGCAG +
Preference number: 6 (lower is better)
Translates to: RWETALIRDCPE*IPQLNLAWTAQ
Trigger: CTGCGCTGTCCAGGCCAGGTTCAGCTGTGGAATTCACTCAGGGCAGTCCCTGATGAGAGCTGTTTCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443175.1
CDS TCA 72 bp GTGGTGCACGCCTGTTATCCCAGCTACTCAAGCGGCTaGGGCAGGAGAATCACTGTAACGCGGAAGGCGGAA +
Preference number: 6 (lower is better)
Translates to: VVHACYPSYSSG*GRRITVTRKAE
Trigger: TTCCGCCTTCCGCGTTACAGTGATTCTCCTGCCTCAGCCGCTTGAGTAGCTGGGATAACAGGCGTGCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480654.5
ENST00000493034.1
CDS TCA 72 bp GATGAGGTGGGAAACAGCTCTCATCAGGGACTGCCCTaGGTGAATTCCACAGCTGAACCTGGCCTGGACAGC +
Preference number: 6 (lower is better)
Translates to: DEVGNSSHQGLP*VNSTAEPGLDS
Trigger: GCTGTCCAGGCCAGGTTCAGCTGTGGAATTCACTCAGGGCAGTCCCTGATGAGAGCTGTTTCCCACCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443175.1
CDS CCA 72 bp GTTGGCAGGAGCGAACACCTGCACCTCATCTGCACCTaGCCCTTCAGACGCTTCCTGGATTTCTGTCGTGAA +
Preference number: 6 (lower is better)
Translates to: VGRSEHLHLICT*PFRRFLDFCRE
Trigger: TTCACGACAGAAATCCAGGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000480654.5
ENST00000493034.1
CDS CCA 72 bp GCTTCCTGGATTTCTGTCGTGAAGGCTGGCAGGGCCTaGGAGGTGGTCTCTCCCACGTCTTTATCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: ASWISVVKAGRA*EVVSPTSLSVQ
Trigger: TTGGACAGATAAAGACGTGGGAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493034.1
CDS CAA 90 bp AGGAATGCTTGTACCCAGGCCAACAGCATCCTTGCCTCCTTCGTCTaGCAGGTGATTGAACGACCAGTGTTTAACCGAGGCCCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: RNACTQANSILASFV*QVIERPVFNRGPLG
Trigger: GCCAAGGGGGCCTCGGTTAAACACTGGTCGTTCAATCACCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCCTGGGTACAAGCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS TCA 72 bp AGGCCAACAGCATCCTTGCCTCCTTCGTCTTGCAGGTaGTTGAACGACCAGTGTTTAACCGAGGCCCCCTTG +
Preference number: 6 (lower is better)
Translates to: RPTASLPPSSCR*LNDQCLTEAPL
Trigger: CAAGGGGGCCTCGGTTAAACACTGGTCGTTCAATCACCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS TCA 72 bp TCCCCTCCTCCTAAGAGGGCCCAGAAGAGAAGCTACTaGCCTCTTGTAGGAGTAGCCCAAGATGATGCCAGC +
Preference number: 6 (lower is better)
Translates to: SPPPKRAQKRSY*PLVGVAQDDAS
Trigger: GCTGGCATCATCTTGGGCTACTCCTACAAGAGGTCAGTAGCTTCTCTTCTGGGCCCTCTTAGGAGGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402249.7
CDS CAA 90 bp GAAGGGCTTCTCTCCTACCTCCCACGTCTTTATCTGTCCAAATCCTaGCTATTTCCCAAGGCCCCTCTCGGTTGCGTTCTTCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: EGLLSYLPRLYLSKS*LFPKAPLGCVLLQG
Trigger: CCCCTGCAGAAGAACGCAACCGAGAGGGGCCTTGGGAAATAGCAAGGATTTGGACAGATAAAGACGTGGGAGGTAGGAGAGAAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480654.5
CDS TCA 72 bp CTCCAGATCCATAGGCTTCTGCTAGGAGCATGTTGCTaGCGAGGAATGCTTGTACCCAGGCCAACAGCATCC +
Preference number: 6 (lower is better)
Translates to: LQIHRLLLGACC*RGMLVPRPTAS
Trigger: GGATGCTGTTGGCCTGGGTACAAGCATTCCTCGTCAGCAACATGCTCCTAGCAGAAGCCTATGGATCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS CAA 72 bp TGTACCCAGGCCAACAGCATCCTTGCCTCCTTCGTCTaGCAGGTGATTGAACGACCAGTGTTTAACCGAGGC +
Preference number: 6 (lower is better)
Translates to: CTQANSILASFV*QVIERPVFNRG
Trigger: GCCTCGGTTAAACACTGGTCGTTCAATCACCTGCAAGACGAAGGAGGCAAGGATGCTGTTGGCCTGGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215912.10
ENST00000402249.7
ENST00000441972.5
ENST00000443175.1
CDS GCA 72 bp GGTGGTCTCTCCCACGTCTTTATCTGTCCAAATCCTTaGTATTTCCCAAGGCCCCTCTCGGTTGCGTTCTTC +
Preference number: 6 (lower is better)
Translates to: GGLSHVFICPNP*YFPRPLSVAFF
Trigger: GAAGAACGCAACCGAGAGGGGCCTTGGGAAATAGCAAGGATTTGGACAGATAAAGACGTGGGAGAGACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493034.1
CDS GCA 72 bp TCTCCTACCTCCCACGTCTTTATCTGTCCAAATCCTTaGTATTTCCCAAGGCCCCTCTCGGTTGCGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SPTSHVFICPNP*YFPRPLSVAFF
Trigger: GAAGAACGCAACCGAGAGGGGCCTTGGGAAATAGCAAGGATTTGGACAGATAAAGACGTGGGAGGTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480654.5
CDS CAA 72 bp CCCCACTTCTACTTCAGGAAACAACCCATGCTTCCTTaGAGCAGCTCACATCTAAGCGTACGCTCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: PHFYFRKQPMLP*SSSHLSVRSVP
Trigger: TGGCACAGAGCGTACGCTTAGATGTGAGCTGCTCAAAGGAAGCATGGGTTGTTTCCTGAAGTAGAAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480654.5
ENST00000493034.1
CDS GCA 72 bp CCTTTGGTAAATCGCTTAACTTCTCTGAAGCTCAGATaGCTCAAACGACTTCTTCCCGCGGTGTGTGTCAGG +
Preference number: 6 (lower is better)
Translates to: PLVNRLTSLKLR*LKRLLPAVCVR
Trigger: CCTGACACACACCGCGGGAAGAAGTCGTTTGAGGCATCTGAGCTTCAGAGAAGTTAAGCGATTTACCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480654.5
ENST00000493034.1