RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3CG (Homo sapiens)

Ensembl gene IDs: ENSG00000105851

Ensembl transcript IDs: ENST00000359195.3, ENST00000440650.6, ENST00000473541.5, ENST00000496166.6

Found 670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATaGAGTCACACAGAGCCTCATGCTCAGAAGGGCACTGTGCTTGGT +
Preference number: 1 (lower is better)
Translates to: QSHHSDPHSAGLMDP*SHTEPHAQKGTVLG
Trigger: ACCAAGCACAGTGCCCTTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR TCA 90 bp TACATTTACCACTCATGCAGACGTGGTAGACCGCGTGTGCTAAACTaGACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCAT +
Preference number: 1 (lower is better)
Translates to: YIYHSCRRGRPRVLN*TPKPSFRPTQCWSH
Trigger: ATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTCAGTTTAGCACACGCGGTCTACCACGTCTGCATGAGTGGTAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CCA 90 bp CCCATGCAGTCACACAGAGCCTCATGCTCAGAAGGGCACTGTGCTTaGTGTGACAACTGCTGTTGCCATCTCGAATTTCTTAATAATTTT +
Preference number: 1 (lower is better)
Translates to: PMQSHRASCSEGHCA*CDNCCCHLEFLNNF
Trigger: AAAATTATTAAGAAATTCGAGATGGCAACAGCAGTTGTCACACCAAGCACAGTGCCCTTCTGAGCATGAGGCTCTGTGTGACTGCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR GCA 90 bp TCCACTTCTCCATACTTTCATCAAAGTGTCACTGAAGCAGCTAAATaGAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATT +
Preference number: 1 (lower is better)
Translates to: STSPYFHQSVTEAAK*SPVGLGLQHLLRFI
Trigger: AATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCATTTAGCTGCTTCAGTGACACTTTGATGAAAGTATGGAGAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CCA 90 bp CTGACTTGTGATCTGTGTTTTCACCTGGCATTGAAGATAGAGCTGTaGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTT +
Preference number: 1 (lower is better)
Translates to: LTCDLCFHLALKIEL*VVPSSRMILVLEHF
Trigger: AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTATCTTCAATGCCAGGTGAAAACACAGATCACAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CCA 90 bp GATAGGAATAAACATTTCATTATAGGGCATGGTCTTCTGTACAGGTaGGTAGAGTGTGATTTTAAAAGGACAGGTTGCCAAAGAAGAGGA +
Preference number: 1 (lower is better)
Translates to: DRNKHFIIGHGLLYR*VECDFKRTGCQRRG
Trigger: TCCTCTTCTTTGGCAACCTGTCCTTTTAAAATCACACTCTACCCACCTGTACAGAAGACCATGCCCTATAATGAAATGTTTATTCCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR TCA 90 bp CACCTGCAGACACTAAGGAGATGTTTGGAAGCATCATTTAAGGAATaGGACAAAGGTTACAACGATTACATCTTTTTCTTTAAAGAGCTT +
Preference number: 1 (lower is better)
Translates to: HLQTLRRCLEASFKE*DKGYNDYIFFFKEL
Trigger: AAGCTCTTTAAAGAAAAAGATGTAATCGTTGTAACCTTTGTCTCATTCCTTAAATGATGCTTCCAAACATCTCCTTAGTGTCTGCAGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR-3UTR GCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCCCAAACAATCAGCAATaGCAACATCTTTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCPNNQQ*QHLFSR
Trigger: CCTGGAGAAAAGATGTTGGCATTGCTGATTGTTTGG...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR-3UTR CCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAAATAGTAGGGAATAGTTaGTCCAGAAGTGCCACAAAA +
Preference number: 2 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEIVGNS*SRSATK
Trigger: TTTTGTGGCACTTCTGGACCAACTATTCCCTACTAT...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CAA 90 bp GTCCTAATGTACAGCCATAGAGCCATAGAGATGAGGTATTTCGATTaGAACAGAAGGAACATTTTGACCCAGGCACTACATTTACCACTC +
Preference number: 2 (lower is better)
Translates to: VLMYSHRAIEMRYFD*NRRNILTQALHLPL
Trigger: GAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTCCTTCTGTTCAAATCGAAATACCTCATCTCTATGGCTCTATGGCTGTACATTAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR-3UTR TCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACAATCTGTACAAGGTCTaGACTTGGCTATTGTTTATC +
Preference number: 2 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDNLYKV*TWLLFI
Trigger: GATAAACAATAGCCAAGTTCAGACCTTGTACAGATT...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR-3UTR TCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTTCTTGTGGACAGAGTTaGCACAAAAAGTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFSCGQS*HKKSHL
Trigger: GAGATGAGACTTTTTGTGTCAACTCTGTCCACAAGA...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTCCTAGCACTGGACATTaGTTAACCAAACAATCAGCA +
Preference number: 2 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFPSTGH*LTKQSA
Trigger: TGCTGATTGTTTGGTTAAGCAATGTCCAGTGCTAGG...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCCTAGCACTGGACATTaGTTAACCAAACAATCAGCA +
Preference number: 2 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAPSTGH*LTKQSA
Trigger: TGCTGATTGTTTGGTTAAGCAATGTCCAGTGCTAGG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
3UTR-3UTR TCA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGAGAAAACATCCTCTTCTaGATTAGAAAGTACTCTTCC +
Preference number: 2 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGENILF*IRKYSS
Trigger: GGAAGAGTACTTTCTAATTCAGAAGAGGATGTTTTC...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGCTATACTTCTGAAATaGCAGCTTTCACAATGTCTA +
Preference number: 2 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPAILLK*QLSQCL
Trigger: TAGACATTGTGAAAGCTGGCATTTCAGAAGTATAGC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
3UTR-3UTR GCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCCTAGCACTGGACATTaGTTAACCAAACAATCAGCA +
Preference number: 2 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIPSTGH*LTKQSA
Trigger: TGCTGATTGTTTGGTTAAGCAATGTCCAGTGCTAGG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR-3UTR TCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGGCATCATTTAAGGAATaGGACAAAGGTTACAACGAT +
Preference number: 2 (lower is better)
Translates to: SYRVKVFLKISQVCKELWASFKE*DKGYND
Trigger: ATCGTTGTAACCTTTGTCTCATTCCTTAAATGATGC...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR GCA 72 bp TGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATaGTCAGAAGGGCACTGTGCTTGGTGTGACAACTGC +
Preference number: 3 (lower is better)
Translates to: WSHGPMQSHRAS*SEGHCAWCDNC
Trigger: GCAGTTGTCACACCAAGCACAGTGCCCTTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CCA 72 bp AAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATaGACCCATGCAGTCACACAGAGCCTCATGCTCAGA +
Preference number: 3 (lower is better)
Translates to: KAIIQTHTVLVS*THAVTQSLMLR
Trigger: TCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR GCA 72 bp CCATACTTTCATCAAAGTGTCACTGAAGCAGCTAAATaGAGTCCTGTGGGGCTAGGTCTACAACATCTGCTT +
Preference number: 3 (lower is better)
Translates to: PYFHQSVTEAAK*SPVGLGLQHLL
Trigger: AAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCATTTAGCTGCTTCAGTGACACTTTGATGAAAGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGTGGGAGCATCGCAATaGATGAAAAAGGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFVGASQ*MKKGGR
Trigger: CCTGCCTCCCTTTTTCATCAATTGCGATGCTCCCAC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR GCA 72 bp GTCAGGCATAAAAGAGGCCCTGTAGTTACTTCCTGCTaGCATGCTGGAGAAAGCTATACTAATCATACTAGA +
Preference number: 3 (lower is better)
Translates to: VRHKRGPVVTSC*HAGESYTNHTR
Trigger: TCTAGTATGATTAGTATAGCTTTCTCCAGCATGGCAGCAGGAAGTAACTACAGGGCCTCTTTTATGCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR CCA 72 bp GATCTGTGTTTTCACCTGGCATTGAAGATAGAGCTGTaGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTA +
Preference number: 3 (lower is better)
Translates to: DLCFHLALKIEL*VVPSSRMILVL
Trigger: TAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTATCTTCAATGCCAGGTGAAAACACAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR GCA 72 bp AATGTCAGGCATAAAAGAGGCCCTGTAGTTACTTCCTaGTGCCATGCTGGAGAAAGCTATACTAATCATACT +
Preference number: 3 (lower is better)
Translates to: NVRHKRGPVVTS*CHAGESYTNHT
Trigger: AGTATGATTAGTATAGCTTTCTCCAGCATGGCAGCAGGAAGTAACTACAGGGCCTCTTTTATGCCTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
3UTR-3UTR CAA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGACTCTTGTGGACAGAGTaGACACAAAAAGTCTCATCT +
Preference number: 3 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGLLWTE*TQKVSS
Trigger: AGATGAGACTTTTTGTGTCAACTCTGTCCACAAGAG...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CCA 72 bp AAACATTTCATTATAGGGCATGGTCTTCTGTACAGGTaGGTAGAGTGTGATTTTAAAAGGACAGGTTGCCAA +
Preference number: 3 (lower is better)
Translates to: KHFIIGHGLLYR*VECDFKRTGCQ
Trigger: TTGGCAACCTGTCCTTTTAAAATCACACTCTACCCACCTGTACAGAAGACCATGCCCTATAATGAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR GCA 72 bp CAAATTATGTCGCCAGTCCTAGATATACATAAAAGTTaGTTTGGCCTGATTCATCTGACTTGTGATCTGTGT +
Preference number: 3 (lower is better)
Translates to: QIMSPVLDIHKS*FGLIHLTCDLC
Trigger: ACACAGATCACAAGTCAGATGAATCAGGCCAAAGCAACTTTTATGTATATCTAGGACTGGCGACATAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCGCTTGGGGTCGCGGCTaGCCACCTCCGCCATGCGCG +
Preference number: 4 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCAWGRG*PPPPCA
Trigger: CGCGCATGGCGGAGGTGGCCAGCCGCGACCCCAAGC...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCCCGGGCTCCGGTGCGTaGCCTTCCAGTAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCPGSGA*PSSSAG
Trigger: GCCTGCGCTACTGGAAGGCCACGCACCGGAGCCCGG...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCTGCTCCACGTTGCCGTaGCCGGCCACGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCCSTLP*PATCSS
Trigger: GCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCA...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCGGGTCAGGGGTGGGCTaGTGCTTAGGCAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCGSGVG*CLGRAI
Trigger: GATAGCCCTGCCTAAGCATCAGCCCACCCCTGACCC...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAATCACCCACGGGTGCATaGCGTAGAGCTTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSESPTGA*RRAWGR
Trigger: GCGACCCCAAGCTCTACGCCATGCACCCGTGGGTGA...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACGGCTGGCCGCAGCACTaGGCGGCTTCATCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDGWPQH*AASSSG
Trigger: GCCGGAGGATGAAGCCGCGCAGTGCTGCGGCCAGCC...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCCGGGCTCCGGTGCGTaGCCTTCCAGTAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFPGSGA*PSSSAG
Trigger: GCCTGCGCTACTGGAAGGCCACGCACCGGAGCCCGG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCATCAGCGCCGTGAGCTaGCGCTGGAAGGCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRISAVS*RWKAWD
Trigger: GTCCCAAGCCTTCCAGCGGCAGCTCACGGCGCTGAT...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACTGGCCACCTCCGCCATaGGCGGGGTCACCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDWPPPP*AGSPSH
Trigger: GTGGCTTGGTGACCCCGCGCATGGCGGAGGTGGCCA...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAAAGAACTGGGGGACTCTaGAGAGGCCTTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSERTGGL*RGLAGQ
Trigger: CTGTCCAGCAAGGCCTCTGCAGAGTCCCCCAGTTCT...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGCCGTGAGCTGCCGCTaGAAGGCTTGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFAVSCR*KAWDSS
Trigger: CGAGGAGTCCCAAGCCTTCCAGCGGCAGCTCACGGC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGCATGGCGTAGAGCTTaGGGTCGCGGCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFAWRRA*GRGWPP
Trigger: AGGTGGCCAGCCGCGACCCCAAGCTCTACGCCATGC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTAGCCAATCAGCGCCGTaGGCTGCCGCTGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFSQSAP*AAAGRL
Trigger: AAGCCTTCCAGCGGCAGCTCACGGCGCTGATTGGCT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACCGTGGCCGGCCACGTaGAGCAGCGCCGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPPWPAT*SSAVSG
Trigger: CCCCGAAACGGCGCTGCTGCACGTGGCCGGCCACGG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGCTTGGGGTCGCGGCTaGCCACCTCCGCCATGCGCG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCAWGRG*PPPPCA
Trigger: CGCGCATGGCGGAGGTGGCCAGCCGCGACCCCAAGC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGGGGGTGTCGTCGGGTaGGACCTTAATGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFGGVVG*DLNGLA
Trigger: AGCCAGACCATTAAGGTCTCACCCGACGACACCCCC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGGCTGGCCGCAGCACTaGGCGGCTTCATCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFGWPQH*AASSSG
Trigger: GCCGGAGGATGAAGCCGCGCAGTGCTGCGGCCAGCC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCGTGGCCGGCCACGTaGAGCAGCGCCGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPWPAT*SSAVSG
Trigger: CCCCGAAACGGCGCTGCTGCACGTGGCCGGCCACGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCAGGCAGTCCAGAGTCTaGACCACCTGGTACTTGTCG +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRRQSRV*TTWYLS
Trigger: CGACAAGTACCAGGTGGTGCAGACTCTGGACTGCCT...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGAGGGCGGGTGCCGCTaGACCAGGTGGATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAEGGCR*TRWIWP
Trigger: GGGCCAGATCCACCTGGTGCAGCGGCACCCGCCCTC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGAGGGCGGGTGCCGCTaGACCAGGTGGATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFEGGCR*TRWIWP
Trigger: GGGCCAGATCCACCTGGTGCAGCGGCACCCGCCCTC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAATGGCAAAGGACTTGTTaGCCATGCTGGATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEWQRTC*PCWMFA
Trigger: GGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCA...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCATGATCATGACTCTCTaGAGTTTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCMIMTL*SFHLLG
Trigger: GCCCAGGAGGTGGAAACTGCAGAGAGTCATGATCAT...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCACTGAAGCAGCTAAATaGAGTCCTGTGGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCTEAAK*SPVGLG
Trigger: ACCTAGCCCCACAGGACTGCATTTAGCTGCTTCAGT...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCCGGGCTCCGGTGCGTaGCCTTCCAGTAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAPGSGA*PSSSAG
Trigger: GCCTGCGCTACTGGAAGGCCACGCACCGGAGCCCGG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTGCCGCTGCACCAGGTaGATCTGGCCCGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNACRCTR*IWPGLR
Trigger: CCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATGCCGCTGCACCAGGTaGATCTGGCCCGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPCRCTR*IWPGLR
Trigger: CCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGCTTGGGGTCGCGGCTaGCCACCTCCGCCATGCGCG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAAWGRG*PPPPCA
Trigger: CGCGCATGGCGGAGGTGGCCAGCCGCGACCCCAAGC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTCCTCGGAGGGCGGGTaGCGCTGCACCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNASSEGG*RCTRWI
Trigger: GATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATCCTCGGAGGGCGGGTaGCGCTGCACCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPSSEGG*RCTRWI
Trigger: GATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTTGGCCACCTCCGCCATaGGCGGGGTCACCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFWPPPP*AGSPSH
Trigger: GTGGCTTGGTGACCCCGCGCATGGCGGAGGTGGCCA...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTAGAACTGGGGGACTCTaGAGAGGCCTTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFRTGGL*RGLAGQ
Trigger: CTGTCCAGCAAGGCCTCTGCAGAGTCCCCCAGTTCT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAAAGTTCTCCAGCTCCATaGCCTATGCGACCTGATAAA +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSESSPAP*PMRPDK
Trigger: TTTATCAGGTCGCATAGGGCATGGAGCTGGAGAACT...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACCATGGAGGACAGGCTaGCCGCAGCACTGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPPWRTG*PQHCAA
Trigger: AGCCGCGCAGTGCTGCGGCCAGCCTGTCCTCCATGG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTGCTCCACGTTGCCGTaGCCGGCCACGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCCSTLP*PATCSS
Trigger: GCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTGCACCAGGTGGATCTaGCCCGGGCTCCGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNACTRWI*PGLRCV
Trigger: CACGCACCGGAGCCCGGGCCAGATCCACCTGGTGCA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTGCCGCTGCACCAGGTaGATCTGGCCCGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCCRCTR*IWPGLR
Trigger: CCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTGCCGCTGGAAGGCTTaGGACTCCTCGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCCRWKA*DSSEGG
Trigger: CCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTGCCGTGAGCTGCCGCTaGAAGGCTTGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: IELWVVPSSRMILVLEHFAVSCR*KAWDSS
Trigger: CGAGGAGTCCCAAGCCTTCCAGCGGCAGCTCACGGC...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCGGGCTGGTTCTCCTTTaGCAAAGGACTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRGLVLL*QRTCCP
Trigger: TGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCC...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCGAAGGGCACTGTGCTTaGTGTGACAACTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDREGHCA*CDNCCC
Trigger: GCAACAGCAGTTGTCACACCAAGCACAGTGCCCTTC...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTTCTCTTCTCCGTTCTTaGGGCAGTGCCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFSLLRS*GSASPT
Trigger: AGTGGGTGAGGCACTGCCTCAAGAACGGAGAAGAGA...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACTCTCTTCTCCGTTCTTaGGGCAGTGCCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDSLLRS*GSASPT
Trigger: AGTGGGTGAGGCACTGCCTCAAGAACGGAGAAGAGA...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGGCTGGCCGCAGCACTaGGCGGCTTCATCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPGWPQH*AASSSG
Trigger: GCCGGAGGATGAAGCCGCGCAGTGCTGCGGCCAGCC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGAGGGCGGGTGCCGCTaGACCAGGTGGATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPEGGCR*TRWIWP
Trigger: GGGCCAGATCCACCTGGTGCAGCGGCACCCGCCCTC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTCCTCGGAGGGCGGGTaGCGCTGCACCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYASSEGG*RCTRWI
Trigger: GATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTGGCCACCTCCGCCATaGGCGGGGTCACCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAWPPPP*AGSPSH
Trigger: GTGGCTTGGTGACCCCGCGCATGGCGGAGGTGGCCA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAACCCATGCTGGATGTTTaGCTCTACAAAAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEPMLDV*LYKNCE
Trigger: CTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGG...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGGCCTTGCTGGACAGTaGTGGAGCTTTACCGCAGTA +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFGLAGQ*WSFTAV
Trigger: TACTGCGGTAAAGCTCCAGCACTGTCCAGCAAGGCC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCATGGAGGACAGGCTaGCCGCAGCACTGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPWRTG*PQHCAA
Trigger: AGCCGCGCAGTGCTGCGGCCAGCCTGTCCTCCATGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTGCTCCACGTTGCCGTaGCCGGCCACGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCCSTLP*PATCSS
Trigger: GCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTAGTCCGCCGCCACGCTaGTCTCCAGCGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNISPPPR*SPALAA
Trigger: GGCTGCGAGCGCTGGAGACCAGCGTGGCGGCGGACT...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAGTCCGCCGCCACGCTaGTCTCCAGCGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSPPPR*SPALAA
Trigger: GGCTGCGAGCGCTGGAGACCAGCGTGGCGGCGGACT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTGCACCAGGTGGATCTaGCCCGGGCTCCGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYACTRWI*PGLRCV
Trigger: CACGCACCGGAGCCCGGGCCAGATCCACCTGGTGCA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTGCCGCTGGAAGGCTTaGGACTCCTCGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCCRWKA*DSSEGG
Trigger: CCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGCATGGCGTAGAGCTTaGGGTCGCGGCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAAWRRA*GRGWPP
Trigger: AGGTGGCCAGCCGCGACCCCAAGCTCTACGCCATGC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAACTCCGGGAGGGGCTTaGACGTCACCCACGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPTPGGA*TSPTGA
Trigger: TGCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTACTCCGGGAGGGGCTTaGACGTCACCCACGGGTGCA +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFTPGGA*TSPTGA
Trigger: TGCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTAGAAGCTCTGCAGGATaGCGCCGGGGGTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFRSSAG*RRGCRR
Trigger: CCGACGACACCCCCGGCGCCATCCTGCAGAGCTTCT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAGAAGCTCTGCAGGATaGCGCCGGGGGTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCRSSAG*RRGCRR
Trigger: CCGACGACACCCCCGGCGCCATCCTGCAGAGCTTCT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTTCGTGGTCCTTGCCGTaGATGGTAAGCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFSWSLP*MVSCSW
Trigger: CCATGAGCAGCTTACCATCCACGGCAAGGACCACGA...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCCAAGCCACGGCGCGTaGACTCCAGCTCATCGTCGT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCPSHGA*TPAHRR
Trigger: ACGACGATGAGCTGGAGTTCACGCGCCGTGGCTTGG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCAGCTCCATGCCCTATaGGACTGGTTTCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFQLHAL*DWFPSW
Trigger: CCATGAAGGAAACCAGTCGCATAGGGCATGGAGCTG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTAGTTCTCCAGCTCCATaGCCTATGCGACTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFSSPAP*PMRLVS
Trigger: GGAAACCAGTCGCATAGGGCATGGAGCTGGAGAACT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACGGGGCTCTTGCATTTaGGCTGGCTGGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPRGSCI*AGWWAA
Trigger: TGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTCATCTGCTCCACGTTaGCGTGGCCGGCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSSAPR*RGRPRA
Trigger: TGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAACCTGGGCCTTCATCTaGTCCACGTTGCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPTWAFI*STLPWP
Trigger: CGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATCAGCGCCGTGAGCTaGCGCTGGAAGGCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAISAVS*RWKAWD
Trigger: GTCCCAAGCCTTCCAGCGGCAGCTCACGGCGCTGAT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACATGATCGCCTCCAATTaGTTGCGAAGCTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDMIASN*LRSWLG
Trigger: GCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCAT...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAACCAAACAATCAGCAATaGCAACATCTTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEPNNQQ*QHLFSR
Trigger: CCTGGAGAAAAGATGTTGGCATTGCTGATTGTTTGG...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCCATGGAGGACAGGCTaGCCGCAGCACTGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIPWRTG*PQHCAA
Trigger: AGCCGCGCAGTGCTGCGGCCAGCCTGTCCTCCATGG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGCTCGCAGCCACACCTaGGCCTTCATCTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPARSHT*AFICST
Trigger: CGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGCTCGCAGCCACACCTaGGCCTTCATCTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAARSHT*AFICST
Trigger: CGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTGCCGCTGGAAGGCTTaGGACTCCTCGGAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNICRWKA*DSSEGG
Trigger: CCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTCACCCACGGGTGCATaGCGTAGAGCTTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNASPTGA*RRAWGR
Trigger: GCGACCCCAAGCTCTACGCCATGCACCCGTGGGTGA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTCACCCACGGGTGCATaGCGTAGAGCTTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSPTGA*RRAWGR
Trigger: GCGACCCCAAGCTCTACGCCATGCACCCGTGGGTGA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTACTCCGGGAGGGGCTTaGACGTCACCCACGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYATPGGA*TSPTGA
Trigger: TGCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAAGCAAGGGCGCTATCATaGTATGGTTCAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEARALS*YGSNFT
Trigger: TGTGAAATTTGAACCATACCATGATAGCGCCCTTGC...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTAGCCAATCAGCGCCGTaGGCTGCCGCTGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYASQSAP*AAAGRL
Trigger: AAGCCTTCCAGCGGCAGCTCACGGCGCTGATTGGCT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCAAGCCACGGCGCGTaGACTCCAGCTCATCGTCGT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPSHGA*TPAHRR
Trigger: ACGACGATGAGCTGGAGTTCACGCGCCGTGGCTTGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGGGGGTGTCGTCGGGTaGGACCTTAATGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPGGVVG*DLNGLA
Trigger: AGCCAGACCATTAAGGTCTCACCCGACGACACCCCC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCCCACAGGGACACGGTaGACACACTCTCGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCPTGTR*THSRGP
Trigger: AGGACCACGAGAGTGTGTTCACCGTGTCCCTGTGGG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGGGTCAGGGGTGGGCTaGTGCTTAGGCAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCGSGVG*CLGRAI
Trigger: GATAGCCCTGCCTAAGCATCAGCCCACCCCTGACCC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCTGCCCGAAGTCAATATaGAATAGGTTTCCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRCPKSI*NRFPVS
Trigger: CGAGACAGGAAACCTATTTCATATTGACTTCGGGCA...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTCCGTTTCGGGGCTCTTaGATTTGCGCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFPFRGS*ICAGWW
Trigger: CCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGG...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTCATCTGCTCCACGTTaGCGTGGCCGGCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYASSAPR*RGRPRA
Trigger: TGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTACCTGGGCCTTCATCTaGTCCACGTTGCCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYATWAFI*STLPWP
Trigger: CGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCATCAGCGCCGTGAGCTaGCGCTGGAAGGCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCISAVS*RWKAWD
Trigger: GTCCCAAGCCTTCCAGCGGCAGCTCACGGCGCTGAT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTTGGTGAAGAAGCTCTaGAGGATGGCGCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNALVKKL*RMAPGV
Trigger: CACCCCCGGCGCCATCCTGCAGAGCTTCTTCACCAA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACGTGCAGCATGGCTGTaGCACAGCCCCTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPRAAWL*HSPSDR
Trigger: CCTATCTGAGGGGCTGTGGCACAGCCATGCTGCACG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGCTCGCAGCCACACCTaGGCCTTCATCTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCARSHT*AFICST
Trigger: CGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGCCGTGAGCTGCCGCTaGAAGGCTTGGGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPAVSCR*KAWDSS
Trigger: CGAGGAGTCCCAAGCCTTCCAGCGGCAGCTCACGGC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGCATGGCGTAGAGCTTaGGGTCGCGGCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPAWRRA*GRGWPP
Trigger: AGGTGGCCAGCCGCGACCCCAAGCTCTACGCCATGC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAGAAGCTCTGCAGGATaGCGCCGGGGGTGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPRSSAG*RRGCRR
Trigger: CCGACGACACCCCCGGCGCCATCCTGCAGAGCTTCT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGGTTGGACTAGACAATaGAACACAGACATTCGGTGG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFGWTRQ*NTDIRW
Trigger: CCACCGAATGTCTGTGTTTCATTGTCTAGTCCAACC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR TCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGCACTTGTAGGAATATaGAGCCTGGCTGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAALVGI*SLAAVP
Trigger: GGGCACGGCAGCCAGGCTTCATATTCCTACAAGTGC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCGAACTCGATGGGGATaGGCTCCATGGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYARTRWG*APWRTG
Trigger: GCCTGTCCTCCATGGAGCTCATCCCCATCGAGTTCG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCCAAGCCACGGCGCGTaGACTCCAGCTCATCGTCGT +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIPSHGA*TPAHRR
Trigger: ACGACGATGAGCTGGAGTTCACGCGCCGTGGCTTGG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGCTCATGGTAGCCGGTaGCTCCCGTGCAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAAHGSR*LPCSHP
Trigger: TGGATGACTGCACGGGAGTCACCGGCTACCATGAGC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCCACAGGGACACGGTaGACACACTCTCGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPTGTR*THSRGP
Trigger: AGGACCACGAGAGTGTGTTCACCGTGTCCCTGTGGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGGGTCAGGGGTGGGCTaGTGCTTAGGCAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIGSGVG*CLGRAI
Trigger: GATAGCCCTGCCTAAGCATCAGCCCACCCCTGACCC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACGGGGCTCTTGCATTTaGGCTGGCTGGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPRGSCI*AGWWAA
Trigger: TGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCGTTTCGGGGCTCTTaGATTTGCGCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPFRGS*ICAGWW
Trigger: CCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCATCTGCTCCACGTTaGCGTGGCCGGCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSSAPR*RGRPRA
Trigger: TGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTTGGTGAAGAAGCTCTaGAGGATGGCGCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCLVKKL*RMAPGV
Trigger: CACCCCCGGCGCCATCCTGCAGAGCTTCTTCACCAA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTTGGTGAAGAAGCTCTaGAGGATGGCGCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALVKKL*RMAPGV
Trigger: CACCCCCGGCGCCATCCTGCAGAGCTTCTTCACCAA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACTGGTTGGGCATTTCTaGTCGAACCCGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPLVGHF*SNPVPF
Trigger: GAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCTGGTTGGGCATTTCTaGTCGAACCCGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCLVGHF*SNPVPF
Trigger: GAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTAATTGCCAGCGCTCCTaGTTTCAGTCCAGGATCATA +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFNCQRS*FQSRII
Trigger: TATGATCCTGGACTGAAAGCAGGAGCGCTGGCAATT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCATTCAATGTCTTCTTTaGTTGTTAACTGGGGCATTC +
Preference number: 4 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCIQCLL*LLTGAF
Trigger: GAATGCCCCAGTTAACAAGCAAAGAAGACATTGAAT...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATTTGCGCTGGCTGGTaGGCAGCACGAACTCGATGG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAICAGW*AARTRW
Trigger: CCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAAT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTGCATTTGCGCTGGCTaGTGGGCAGCACGAACTCGA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNACICAG*WAARTR
Trigger: TCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTCTCTTGCATTTGCGCTaGCTGGTGGGCAGCACGAAC +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFLLHLR*LVGSTN
Trigger: GTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAG...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAACCTTTAAATGGGAAATaGATAAGGCAAGTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEPLNGK*IRQVVF
Trigger: GAACACTACTTGCCTTATCCATTTCCCATTTAAAGG...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGCAGTTTCCACCTCCTaGGCTCAGGCAATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCAVSTS*AQAILL
Trigger: CAGGAGGATTGCCTGAGCCCAGGAGGTGGAAACTGC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGCAGTTTCCACCTCCTaGGCTCAGGCAATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFAVSTS*AQAILL
Trigger: CAGGAGGATTGCCTGAGCCCAGGAGGTGGAAACTGC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGCGAACTCGATGGGGATaGGCTCCATGGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWRTRWG*APWRTG
Trigger: GCCTGTCCTCCATGGAGCTCATCCCCATCGAGTTCG...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGGGGGTGTCGTCGGGTaGGACCTTAATGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIGGVVG*DLNGLA
Trigger: AGCCAGACCATTAAGGTCTCACCCGACGACACCCCC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGCTCATGGTAGCCGGTaGCTCCCGTGCAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPAHGSR*LPCSHP
Trigger: TGGATGACTGCACGGGAGTCACCGGCTACCATGAGC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTACAGCACCTCCTCTGTaGAGGGTTTGGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYATAPPL*RVWGWF
Trigger: GAACCAGCCCCAAACCCTTCACAGAGGAGGTGCTGT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCACAGCACCTCCTCTGTaGAGGGTTTGGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCTAPPL*RVWGWF
Trigger: GAACCAGCCCCAAACCCTTCACAGAGGAGGTGCTGT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGAAGCCTGGCTGCCGTaGCCTCCCTTTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPEAWLP*PPFSSQ
Trigger: TTGGGAGGAAAAGGGAGGGCACGGCAGCCAGGCTTC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR GCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCCGTTTCGGGGCTCTTaGATTTGCGCTGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIPFRGS*ICAGWW
Trigger: CCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAGGCAGTCCAGAGTCTaGACCACCTGGTACTTGTCG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPRQSRV*TTWYLS
Trigger: CGACAAGTACCAGGTGGTGCAGACTCTGGACTGCCT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATCCAGCTCATCGTCGTaGACGTTGCTGACGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPSSSSS*TLLTSV
Trigger: CACTGACGTCAGCAACGTGCACGACGATGAGCTGGA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGGCCTTGCTGGACAGTaGTGGAGCTTTACCGCAGTA +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFGLAGQ*WSFTAV
Trigger: TACTGCGGTAAAGCTCCAGCACTGTCCAGCAAGGCC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACGTGCAGCATGGCTGTaGCACAGCCCCTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPRAAWL*HSPSDR
Trigger: CCTATCTGAGGGGCTGTGGCACAGCCATGCTGCACG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCGTGCAGCATGGCTGTaGCACAGCCCCTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIRAAWL*HSPSDR
Trigger: CCTATCTGAGGGGCTGTGGCACAGCCATGCTGCACG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGTTCTCCAGCTCCATaGCCTATGCGACCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNASSPAP*PMRPSV
Trigger: CACACTGGGTCGCATAGGGCATGGAGCTGGAGAACT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440650.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTGCATTTGCGCTGGCTaGTGGGCAGCACGAACTCGA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYACICAG*WAARTR
Trigger: TCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCTCTTGCATTTGCGCTaGCTGGTGGGCAGCACGAAC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALLHLR*LVGSTN
Trigger: GTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCTCTTGCATTTGCGCTaGCTGGTGGGCAGCACGAAC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCLLHLR*LVGSTN
Trigger: GTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCTGCAGAGGCCTTGCTaGACAGTGCTGGAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNALQRPC*TVLELY
Trigger: GTAAAGCTCCAGCACTGTCCAGCAAGGCCTCTGCAG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGACTGCAGAGGCCTTGCTaGACAGTGCTGGAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGLQRPC*TVLELY
Trigger: GTAAAGCTCCAGCACTGTCCAGCAAGGCCTCTGCAG...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCGCAGGAGGAAACGGTaGTCTATCAGCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNARRRKR*SISSRF
Trigger: GAACCTGCTGCTGATAGACCACCGTTTCCTCCTGCG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCAGTCCAGGATCATATaGAACTCTAAAGCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFQSRII*NSKAFG
Trigger: CCCGAAAGCTTTAGAGTTCCATATGATCCTGGACTG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATCTTGGCCATCTTGGTaGAGAAGCTCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPSWPSW*RSSAGW
Trigger: CCATCCTGCAGAGCTTCTTCACCAAGATGGCCAAGA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTCTTGGCCATCTTGGTaGAGAAGCTCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSWPSW*RSSAGW
Trigger: CCATCCTGCAGAGCTTCTTCACCAAGATGGCCAAGA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTCTTGGCCATCTTGGTaGAGAAGCTCTGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNASWPSW*RSSAGW
Trigger: CCATCCTGCAGAGCTTCTTCACCAAGATGGCCAAGA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACCTCTACAAAAACTGTaGGGTCGGTGTTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPPLQKL*GRCSEA
Trigger: TGCCTCGGAACACCGACCTCACAGTTTTTGTAGAGG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCCTCTACAAAAACTGTaGGGTCGGTGTTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAPLQKL*GRCSEA
Trigger: TGCCTCGGAACACCGACCTCACAGTTTTTGTAGAGG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGACAGCACCTCCTCTGTaGAGGGTTTGGGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWTAPPL*RVWGWF
Trigger: GAACCAGCCCCAAACCCTTCACAGAGGAGGTGCTGT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGTGGATCAGTGGCTATaGTCGCCTCCAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCVDQWL*SPPIAC
Trigger: GCAAGCAATTGGAGGCGATCATAGCCACTGATCCAC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGAGTGGATCAGTGGCTATaGTCGCCTCCAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGVDQWL*SPPIAC
Trigger: GCAAGCAATTGGAGGCGATCATAGCCACTGATCCAC...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAATATGAAGCCTGGCTaGCGTGCCCTCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPNMKPG*RALPFP
Trigger: AGGAAAAGGGAGGGCACGGCAGCCAGGCTTCATATT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGGCCTTGCTGGACAGTaGTGGAGCTTTACCGCAGTA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAGLAGQ*WSFTAV
Trigger: TACTGCGGTAAAGCTCCAGCACTGTCCAGCAAGGCC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAGAACTGGGGGACTCTaGAGAGGCCTTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPRTGGL*RGLAGQ
Trigger: CTGTCCAGCAAGGCCTCTGCAGAGTCCCCCAGTTCT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACTGGTTGGGCATTTCTaGTCGAACCCGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPLVGHF*SNPVPF
Trigger: GAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTTCGCCTCCAATTGCTTaGGAAGCTGGTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: IELWVVPSSRMILVLEHFSPPIA*EAGWAF
Trigger: AAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGA...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTATGATCGCCTCCAATTaGTTGCGAAGCTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFMIASN*LRSWLG
Trigger: GCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCAT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTATGATCGCCTCCAATTaGTTGCGAAGCTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCMIASN*LRSWLG
Trigger: GCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCAT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCCTTTCGTATCTAAAATaGCAGAGCAATTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRLSYLK*QSNSLS
Trigger: GGACAAAGAATTGCTCTGGCATTTTAGATACGAAAG...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCCAAACAATCAGCAATaGCAACATCTTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFPNNQQ*QHLFSR
Trigger: CCTGGAGAAAAGATGTTGGCATTGCTGATTGTTTGG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCCTAGCACTGGACATTaGTTAACCAAACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFPSTGH*LTKQSA
Trigger: TGCTGATTGTTTGGTTAAGCAATGTCCAGTGCTAGG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACCCTAGCACTGGACATTaGTTAACCAAACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDPSTGH*LTKQSA
Trigger: TGCTGATTGTTTGGTTAAGCAATGTCCAGTGCTAGG...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGGTTTAGATTTCTCCTaGTGTGTTTGTGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFGLDFS*CVCVSQ
Trigger: CTGAGACACACAAACACAGCAGGAGAAATCTAAACC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTCGTGGTCCTTGCCGTaGATGGTAAGCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYASWSLP*MVSCSW
Trigger: CCATGAGCAGCTTACCATCCACGGCAAGGACCACGA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGTGAACACACTCTCGTaGTCCTTGCCGTGGATGGTA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAVNTLS*SLPWMV
Trigger: TACCATCCACGGCAAGGACCACGAGAGTGTGTTCAC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGGGCTGGTTCTCCTTTaGCAAAGGACTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAGLVLL*QRTCCP
Trigger: TGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCTGCAGAGGCCTTGCTaGACAGTGCTGGAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCLQRPC*TVLELY
Trigger: GTAAAGCTCCAGCACTGTCCAGCAAGGCCTCTGCAG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGCTGAACTTTGCCCTTaGACTCAGAACTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFAELCP*TQNWGT
Trigger: AGTCCCCCAGTTCTGAGTCCAAGGGCAAAGTTCAGC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGAGCTGAACTTTGCCCTTaGACTCAGAACTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGAELCP*TQNWGT
Trigger: AGTCCCCCAGTTCTGAGTCCAAGGGCAAAGTTCAGC...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGCTTGCGAAGCTGGTTaGGCATTTCTGCTCGAACCC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCACEAG*AFLLEP
Trigger: GGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGCTTGCGAAGCTGGTTaGGCATTTCTGCTCGAACCC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAACEAG*AFLLEP
Trigger: GGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCGTTTCTGAACTGCAATaGCTCTTACATTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRVSELQ*LLHFHL
Trigger: CAGATGAAAATGTAAGAGCCATTGCAGTTCAGAAAC...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTTGCTTTGCTGAATTTTaGCAATTGTCGTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFCFAEF*QLSWRL
Trigger: AAGACGCCACGACAATTGCCAAAATTCAGCAAAGCA...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCGATAACTCACTCTTGTaGACAGAGTTGACACAAAAA +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRDNSLL*TELTQK
Trigger: TTTTTGTGTCAACTCTGTCCACAAGAGTGAGTTATC...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGGTTTCCTTCATGGTTaGGGCTATGAAGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFGFLHG*GYEAFP
Trigger: GGGGAAAGCTTCATAGCCTCAACCATGAAGGAAACC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR TCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGCCCACTGGAAGTTTTTaGTGGGCGTTTCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWPTGSF*WAFRPP
Trigger: TGGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGG...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACCCACTGGAAGTTTTTaGTGGGCGTTTCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPPTGSF*WAFRPP
Trigger: TGGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCCCACTGGAAGTTTTTaGTGGGCGTTTCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIPTGSF*WAFRPP
Trigger: TGGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCTCTTCTCCGTTCTTaGGGCAGTGCCTCACCCACT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSLLRS*GSASPT
Trigger: AGTGGGTGAGGCACTGCCTCAAGAACGGAGAAGAGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGTGTCCAGTACCACGTaGATCTCTTCTCCGTTCTTG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCVSSTT*ISSPFL
Trigger: CAAGAACGGAGAAGAGATTCACGTGGTACTGGACAC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTCTCTCCACTGCTGCCTaGAACTTTTCTTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFLSTAA*NFSSVG
Trigger: CCCTACTGAAGAAAAGTTTCAGGCAGCAGTGGAGAG...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCTCTCCACTGCTGCCTaGAACTTTTCTTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNALSTAA*NFSSVG
Trigger: CCCTACTGAAGAAAAGTTTCAGGCAGCAGTGGAGAG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCTCTCCACTGCTGCCTaGAACTTTTCTTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCLSTAA*NFSSVG
Trigger: CCCTACTGAAGAAAAGTTTCAGGCAGCAGTGGAGAG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGTTTCTCTCCTTGTTTaGTGCCAAGAACAAGATGTA +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFVSLLV*CQEQDV
Trigger: TACATCTTGTTCTTGGCATCAAACAAGGAGAGAAAC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGAGGCAGTCCAGAGTCTaGACCACCTGGTACTTGTCG +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWRQSRV*TTWYLS
Trigger: CGACAAGTACCAGGTGGTGCAGACTCTGGACTGCCT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTCCAGCTCATCGTCGTaGACGTTGCTGACGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNISSSSS*TLLTSV
Trigger: CACTGACGTCAGCAACGTGCACGACGATGAGCTGGA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCCAGCTCATCGTCGTaGACGTTGCTGACGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSSSSS*TLLTSV
Trigger: CACTGACGTCAGCAACGTGCACGACGATGAGCTGGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATGGCAAAGGACTTGTTaGCCATGCTGGATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPWQRTC*PCWMFA
Trigger: GGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCCCTTCCCAGATATCTaGCACATGTGGAGGACGTAT +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAPFPDI*HMWRTY
Trigger: ATACGTCCTCCACATGTGGCAGATATCTGGGAAGGG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTCGCCTCCAATTGCTTaGGAAGCTGGTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSPPIA*EAGWAF
Trigger: AAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTGTTGGGTAAAGTCGTaGAGCATGGCTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYACWVKS*SMAVPQ
Trigger: CTGTGGCACAGCCATGCTGCACGACTTTACCCAACA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTAAATCTCTCCACTGCTaGCTGAAACTTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFKSLHC*LKLFFS
Trigger: ACTGAAGAAAAGTTTCAGGCAGCAGTGGAGAGATTT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACTCCATCCTTTGTCTCTaGAAACTTCGATCTGATCAA +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDSILCL*KLRSDQ
Trigger: TTGATCAGATCGAAGTTTGCAGAGACAAAGGATGGA...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAATGATCATGACTCTCTaGAGTTTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPMIMTL*SFHLLG
Trigger: GCCCAGGAGGTGGAAACTGCAGAGAGTCATGATCAT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGCAGCTCCATGCCCTATaGGACCTGATAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWQLHAL*DLIKQR
Trigger: CCGCTGCTTTATCAGGTCGCATAGGGCATGGAGCTG...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCAGTGCCTCACCCACTaGAAGTTTTTGATGGGCGTT +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAQCLTH*KFLMGV
Trigger: AACGCCCATCAAAAACTTCCAGTGGGTGAGGCACTG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCAGTGCCTCACCCACTaGAAGTTTTTGATGGGCGTT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCQCLTH*KFLMGV
Trigger: AACGCCCATCAAAAACTTCCAGTGGGTGAGGCACTG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGTCGTGGTCCTTGCCGTaGATGGTAAGCTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWSWSLP*MVSCSW
Trigger: CCATGAGCAGCTTACCATCCACGGCAAGGACCACGA...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGTGAACACACTCTCGTaGTCCTTGCCGTGGATGGTA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAVNTLS*SLPWMV
Trigger: TACCATCCACGGCAAGGACCACGAGAGTGTGTTCAC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGGGCTGGTTCTCCTTTaGCAAAGGACTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAGLVLL*QRTCCP
Trigger: TGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCTTGCTGGACAGTGCTaGAGCTTTACCGCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCLAGQC*SFTAVD
Trigger: ATCTACTGCGGTAAAGCTCCAGCACTGTCCAGCAAG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCTTGCTGGACAGTGCTaGAGCTTTACCGCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNALAGQC*SFTAVD
Trigger: ATCTACTGCGGTAAAGCTCCAGCACTGTCCAGCAAG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGCTGAACTTTGCCCTTaGACTCAGAACTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAAELCP*TQNWGT
Trigger: AGTCCCCCAGTTCTGAGTCCAAGGGCAAAGTTCAGC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCGCAGGAGGAAACGGTaGTCTATCAGCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIRRRKR*SISSRF
Trigger: GAACCTGCTGCTGATAGACCACCGTTTCCTCCTGCG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGATATCTGCCACATGTaGAGGACGTATTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPDICHM*RTYSPR
Trigger: CCGTGGAGAATACGTCCTCCACATGTGGCAGATATC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGATATCTGCCACATGTaGAGGACGTATTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCDICHM*RTYSPR
Trigger: CCGTGGAGAATACGTCCTCCACATGTGGCAGATATC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGGCTTGCGAAGCTGGTTaGGCATTTCTGCTCGAACCC +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWACEAG*AFLLEP
Trigger: GGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGC...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGCTTCAGCAGAAATCTaGCAAGGGCGCTATCATGGT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCASAEI*QGRYHG
Trigger: ACCATGATAGCGCCCTTGCCAGATTTCTGCTGAAGC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGCTTCAGCAGAAATCTaGCAAGGGCGCTATCATGGT +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFASAEI*QGRYHG
Trigger: ACCATGATAGCGCCCTTGCCAGATTTCTGCTGAAGC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACAACATCTCGATTACTTaGACTTGTTGGGTAAAGTCG +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDNISIT*TCWVKS
Trigger: CGACTTTACCCAACAAGTCCAAGTAATCGAGATGTT...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCAGTTGTGAAATAACTTaGGAACTGACGTCATACTTT +
Preference number: 4 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRSCEIT*ELTSYF
Trigger: AAAGTATGACGTCAGTTCCCAAGTTATTTCACAACT...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTAAAATAAGCATGTCTTaGCGCAGATCATCACCATGT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFKISMS*RRSSPC
Trigger: ACATGGTGATGATCTGCGCCAAGACATGCTTATTTT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACAAAATAAGCATGTCTTaGCGCAGATCATCACCATGT +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDKISMS*RRSSPC
Trigger: ACATGGTGATGATCTGCGCCAAGACATGCTTATTTT...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTATAGTAGGGAATAGTTaGTCCAGAAGTGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFIVGNS*SRSATK
Trigger: TTTTGTGGCACTTCTGGACCAACTATTCCCTACTAT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CAA 72 bp GAGATGAGGTATTTCGATTTGAACAGAAGGAACATTTaGACCCAGGCACTACATTTACCACTCATGCAGACG +
Preference number: 4 (lower is better)
Translates to: EMRYFDLNRRNI*TQALHLPLMQT
Trigger: CGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTCCTTCTGTTCAAATCGAAATACCTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGTGTCCAGTACCACGTaGATCTCTTCTCCGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAVSSTT*ISSPFL
Trigger: CAAGAACGGAGAAGAGATTCACGTGGTACTGGACAC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAACATCCAAAGCACTTTaGTCCCAGACTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPTSKAL*SQTSLL
Trigger: CAGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTACATCCAAAGCACTTTaGTCCCAGACTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFTSKAL*SQTSLL
Trigger: CAGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACCCACTGTGCTTTGCTaGATTTTGGCAATTGTCGTG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPPTVLC*ILAIVV
Trigger: CACGACAATTGCCAAAATTCAGCAAAGCACAGTGGG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTTTTTCTTTGAGCCAGTaGTTCAGGACTTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFFSLSQ*FRTSSL
Trigger: TAAAGATGAAGTCCTGAATCACTGGCTCAAAGAAAA...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGCATCATTTAAGGAATaGGACAAAGGTTACAACGAT +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFASFKE*DKGYND
Trigger: ATCGTTGTAACCTTTGTCTCATTCCTTAAATGATGC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCCGCGTGTGCTAAACTaGACACCAAAGCCATCATTC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAPRVLN*TPKPSF
Trigger: GAATGATGGCTTTGGTGTTCAGTTTAGCACACGCGG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAGGACTTGTTGCCCATaGTGGATGTTTGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCRTCCP*WMFAST
Trigger: TGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAGAGAAGCTGAACTTTaGCCTTGGACTCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCREAEL*PWTQNW
Trigger: CCAGTTCTGAGTCCAAGGGCAAAGTTCAGCTTCTCT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAGAGAAGCTGAACTTTaGCCTTGGACTCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPREAEL*PWTQNW
Trigger: CCAGTTCTGAGTCCAAGGGCAAAGTTCAGCTTCTCT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCTTGTCTGGGTTAGTTaGAGACGTGAGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCLVWVS*RREFVS
Trigger: GCTGACAAACTCACGTCTGCAACTAACCCAGACAAG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCTTTCGTATCTAAAATaGCAGAGCAATTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFLSYLK*QSNSLS
Trigger: GGACAAAGAATTGCTCTGGCATTTTAGATACGAAAG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATTGCAGTCCAGGAGCTaGATTGTTAACCCAACATCC +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPLQSRS*IVNPTS
Trigger: GGATGTTGGGTTAACAATGCAGCTCCTGGACTGCAA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTTTTCATCTGAGAAGTTaGAGTCCAGGAGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: IELWVVPSSRMILVLEHFFHLRS*SPGAAL
Trigger: CAATGCAGCTCCTGGACTGCAACTTCTCAGATGAAA...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATGTTGGGTAAAGTCGTaGAGCATGGCTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPCWVKS*SMAVPQ
Trigger: CTGTGGCACAGCCATGCTGCACGACTTTACCCAACA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGTGTTGGGTAAAGTCGTaGAGCATGGCTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWCWVKS*SMAVPQ
Trigger: CTGTGGCACAGCCATGCTGCACGACTTTACCCAACA...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAATTGCCAGCGCTCCTaGTTTCAGTCCAGGATCATA +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCNCQRS*FQSRII
Trigger: TATGATCCTGGACTGAAAGCAGGAGCGCTGGCAATT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATGTCACCAGTTGAAATaGAACCATATGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPCHQLK*NHMAGG
Trigger: GCCTCCTGCCATATGGTTGCATTTCAACTGGTGACA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCCGTGTTGCCCACTGTaGTTTGCTGAATTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCPCCPL*FAEFWQ
Trigger: TTGCCAAAATTCAGCAAAGCACAGTGGGCAACACGG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACAGAAACCAATTAAACTaGACAGTCCATCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDRNQLN*TVHPLS
Trigger: AGACAAAGGATGGACTGTGCAGTTTAATTGGTTTCT...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTACATTTACCACTCATaGAGACGTGGTAGACCGCGT +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAYIYHS*RRGRPR
Trigger: ACGCGGTCTACCACGTCTGCATGAGTGGTAAATGTA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCATGCCCTATGCGACTaGTTTCCTTCATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAHALCD*FPSWLR
Trigger: CCTCAACCATGAAGGAAACCAGTCGCATAGGGCATG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCAGTGCCTCACCCACTaGAAGTTTTTGATGGGCGTT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAQCLTH*KFLMGV
Trigger: AACGCCCATCAAAAACTTCCAGTGGGTGAGGCACTG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGTGAACACACTCTCGTaGTCCTTGCCGTGGATGGTA +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIVNTLS*SLPWMV
Trigger: TACCATCCACGGCAAGGACCACGAGAGTGTGTTCAC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCTTGCTGGACAGTGCTaGAGCTTTACCGCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCLAGQC*SFTAVD
Trigger: ATCTACTGCGGTAAAGCTCCAGCACTGTCCAGCAAG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGATATCTGCCACATGTaGAGGACGTATTCTCCACGG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYADICHM*RTYSPR
Trigger: CCGTGGAGAATACGTCCTCCACATGTGGCAGATATC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTAATTGCTTGCGAAGCTaGTTGGGCATTTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFNCLRS*LGISAR
Trigger: TCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGCTTCAGCAGAAATCTaGCAAGGGCGCTATCATGGT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCASAEI*QGRYHG
Trigger: ACCATGATAGCGCCCTTGCCAGATTTCTGCTGAAGC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATCTGCTGATAGTGTCTaGACTGGGCTATCTCACTTC +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPSADSV*TGLSHF
Trigger: GAAGTGAGATAGCCCAGTCCAGACACTATCAGCAGA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTCAGTCCAGGATCATATaGAACTCTAAAGCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: IELWVVPSSRMILVLEHFQSRII*NSKAFG
Trigger: CCCGAAAGCTTTAGAGTTCCATATGATCCTGGACTG...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAATTCTTCCGCTTTTCTaGGGCTCCCTTCATATCCAG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPILPLF*GSLHIQ
Trigger: CTGGATATGAAGGGAGCCCCAGAAAAGCGGAAGAAT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTATTATAACCTGGGAATaGAGCGCAGGCAAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFIITWE*SAGKGV
Trigger: AACACCCTTGCCTGCGCTCCATTCCCAGGTTATAAT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496166.6
3UTR CAA 72 bp TACAGCCATAGAGCCATAGAGATGAGGTATTTCGATTaGAACAGAAGGAACATTTTGACCCAGGCACTACAT +
Preference number: 4 (lower is better)
Translates to: YSHRAIEMRYFD*NRRNILTQALH
Trigger: ATGTAGTGCCTGGGTCAAAATGTTCCTTCTGTTCAAATCGAAATACCTCATCTCTATGGCTCTATGGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAAGCTCTCCAGTTTCTaGACTGCAATGGCTCTTACA +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCKLSSF*TAMALT
Trigger: TGTAAGAGCCATTGCAGTTCAGAAACTGGAGAGCTT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAGCTTTCGGGGAGTTaGGAATTCTGCAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAKLSGS*EFCRFS
Trigger: TGAAAACCTGCAGAATTCTCAACTCCCCGAAAGCTT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAAGCTTTCGGGGAGTTaGGAATTCTGCAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCKLSGS*EFCRFS
Trigger: TGAAAACCTGCAGAATTCTCAACTCCCCGAAAGCTT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCCACTGTGCTTTGCTaGATTTTGGCAATTGTCGTG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPTVLC*ILAIVV
Trigger: CACGACAATTGCCAAAATTCAGCAAAGCACAGTGGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCCCACTGTGCTTTGCTaGATTTTGGCAATTGTCGTG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAPTVLC*ILAIVV
Trigger: CACGACAATTGCCAAAATTCAGCAAAGCACAGTGGG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACCCATGCTGGATGTTTaGCTCTACAAAAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPPMLDV*LYKNCE
Trigger: CTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAGGACTTGTTGCCCATaGTGGATGTTTGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCRTCCP*WMFAST
Trigger: TGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATGGCAAAGGACTTGTTaGCCATGCTGGATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPWQRTC*PCWMFA
Trigger: GGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCTTGTCTGGGTTAGTTaGAGACGTGAGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALVWVS*RREFVS
Trigger: GCTGACAAACTCACGTCTGCAACTAACCCAGACAAG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCGCCTCCAATTGCTTaGGAAGCTGGTTGGGCATTT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSPPIA*EAGWAF
Trigger: AAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTTTCATCTGAGAAGTTaGAGTCCAGGAGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAFHLRS*SPGAAL
Trigger: CAATGCAGCTCCTGGACTGCAACTTCTCAGATGAAA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATTTCATCTGAGAAGTTaGAGTCCAGGAGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPFHLRS*SPGAAL
Trigger: CAATGCAGCTCCTGGACTGCAACTTCTCAGATGAAA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCGTGTTGCCCACTGTaGTTTGCTGAATTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPCCPL*FAEFWQ
Trigger: TTGCCAAAATTCAGCAAAGCACAGTGGGCAACACGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGACTTCATCTTTAAATaGTCCCGTGTTGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNADFIFK*SRVAHC
Trigger: ACAGTGGGCAACACGGGAGCATTTAAAGATGAAGTC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGAGTAGTTACTTCCTGCTaGCATGCTGGAGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGVVTSC*HAGESY
Trigger: ATAGCTTTCTCCAGCATGGCAGCAGGAAGTAACTAC...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACTGTTCACTGGGCTCTaGAAATTATGTCGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPLFTGL*KLCRQS
Trigger: GGACTGGCGACATAATTTGCAGAGCCCAGTGAACAG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGCCTCCAAATTATACTaGAGAATTCCTATATGTAAC +
Preference number: 4 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFASKLY*RIPICN
Trigger: GTTACATATAGGAATTCTGCAGTATAATTTGGAGGC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTAAATCCTGTTCGCTTTaGCTTTCGGGAATATCCATC +
Preference number: 4 (lower is better)
Translates to: IELWVVPSSRMILVLEHFKSCSL*LSGISI
Trigger: GATGGATATTCCCGAAAGCCAAAGCGAACAGGATTT...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGCATTGAAGCTTCCTTaGTCTTCTCCCTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCALKLP*SSPFPD
Trigger: ATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAATTGCTTGCGAAGCTaGTTGGGCATTTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCNCLRS*LGISAR
Trigger: TCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTGTGAGAGGGTTAAGTaGATCAGTGGCTATGATCGC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYACERVK*ISGYDR
Trigger: GCGATCATAGCCACTGATCCACTTAACCCTCTCACA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTGTGAGAGGGTTAAGTaGATCAGTGGCTATGATCGC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCCERVK*ISGYDR
Trigger: GCGATCATAGCCACTGATCCACTTAACCCTCTCACA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGGCGCTATCATGGTATaGTTCAAATTTCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFGAIMV*FKFHSL
Trigger: CAGGCTGTGAAATTTGAACCATACCATGATAGCGCC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTTGCTTTGCTGAATTTTaGCAATTGTCGTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: IELWVVPSSRMILVLEHFCFAEF*QLSWRL
Trigger: AAGACGCCACGACAATTGCCAAAATTCAGCAAAGCA...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTATTCTTCCGCTTTTCTaGGGCTCCCTTCATATCCAG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAILPLF*GSLHIQ
Trigger: CTGGATATGAAGGGAGCCCCAGAAAAGCGGAAGAAT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTAAGCTCTCCAGTTTCTaGACTGCAATGGCTCTTACA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAKLSSF*TAMALT
Trigger: TGTAAGAGCCATTGCAGTTCAGAAACTGGAGAGCTT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTGCCCGAAGTCAATATaGAATAGGTTTCCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCCPKSI*NRFPVS
Trigger: CGAGACAGGAAACCTATTTCATATTGACTTCGGGCA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTTAACACAGATGTCCTaGAATTTCTGGAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCLTQMS*NFWKCG
Trigger: CCCACACTTCCAGAAATTTCAGGACATCTGTGTTAA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTTCATGGAGAACAGGATaGTCAGTAGGTTTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFSWRTG*SVGLCD
Trigger: ATCACACAAACCTACTGATCATCCTGTTCTCCATGA...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATCATGGAGAACAGGATaGTCAGTAGGTTTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPSWRTG*SVGLCD
Trigger: ATCACACAAACCTACTGATCATCCTGTTCTCCATGA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTACAGAAGGAACATTTTaGCCCAGGCACTACATTTAC +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFTEGTF*PRHYIY
Trigger: GTAAATGTAGTGCCTGGGTCAAAATGTTCCTTCTGT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCACCTGCAAAACTATTaGCGGAACGTTGTAGATATC +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAHLQNY*RNVVDI
Trigger: GATATCTACAACGTTCCGGCAATAGTTTTGCAGGTG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCCCATGCTGGATGTTTaGCTCTACAAAAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAPMLDV*LYKNCE
Trigger: CTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAGGACTTGTTGCCCATaGTGGATGTTTGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPRTCCP*WMFAST
Trigger: TGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAGAGAAGCTGAACTTTaGCCTTGGACTCAGAACTGG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPREAEL*PWTQNW
Trigger: CCAGTTCTGAGTCCAAGGGCAAAGTTCAGCTTCTCT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCAATTCTTTGTCCTCTaGTGTGAGAGGGTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAQFFVL*CERVKW
Trigger: CCACTTAACCCTCTCACAGCAGAGGACAAAGAATTG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATTGCAGTCCAGGAGCTaGATTGTTAACCCAACATCC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPLQSRS*IVNPTS
Trigger: GGATGTTGGGTTAACAATGCAGCTCCTGGACTGCAA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGAATTGCCAGCGCTCCTaGTTTCAGTCCAGGATCATA +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWNCQRS*FQSRII
Trigger: TATGATCCTGGACTGAAAGCAGGAGCGCTGGCAATT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGTGTCACCAGTTGAAATaGAACCATATGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWCHQLK*NHMAGG
Trigger: GCCTCCTGCCATATGGTTGCATTTCAACTGGTGACA...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATGTCACCAGTTGAAATaGAACCATATGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPCHQLK*NHMAGG
Trigger: GCCTCCTGCCATATGGTTGCATTTCAACTGGTGACA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGCCGTGTTGCCCACTGTaGTTTGCTGAATTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWPCCPL*FAEFWQ
Trigger: TTGCCAAAATTCAGCAAAGCACAGTGGGCAACACGG...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGACTTCATCTTTAAATaGTCCCGTGTTGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYADFIFK*SRVAHC
Trigger: ACAGTGGGCAACACGGGAGCATTTAAAGATGAAGTC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATGCCACACAGTAGCCTaGACAGGAATAAACAAATCT +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPCHTVA*TGINKS
Trigger: AGATTTGTTTATTCCTGTGCAGGCTACTGTGTGGCA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCCTAGCACTGGACATTaGTTAACCAAACAATCAGCA +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCPSTGH*LTKQSA
Trigger: TGCTGATTGTTTGGTTAAGCAATGTCCAGTGCTAGG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGGTTTAGATTTCTCCTaGTGTGTTTGTGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAGLDFS*CVCVSQ
Trigger: CTGAGACACACAAACACAGCAGGAGAAATCTAAACC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCCCTTCATATCCAGATaGAGAGGAAGTGTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAPFISR*RGSVAV
Trigger: AACTGCAACACTTCCTCTGCATCTGGATATGAAGGG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440650.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGCATTGAAGCTTCCTTaGTCTTCTCCCTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIALKLP*SSPFPD
Trigger: ATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTGTGAGAGGGTTAAGTaGATCAGTGGCTATGATCGC +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNICERVK*ISGYDR
Trigger: GCGATCATAGCCACTGATCCACTTAACCCTCTCACA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGGCGCTATCATGGTATaGTTCAAATTTCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCGAIMV*FKFHSL
Trigger: CAGGCTGTGAAATTTGAACCATACCATGATAGCGCC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGTCTGCTGATAGTGTCTaGACTGGGCTATCTCACTTC +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWSADSV*TGLSHF
Trigger: GAAGTGAGATAGCCCAGTCCAGACACTATCAGCAGA...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCTGCTGATAGTGTCTaGACTGGGCTATCTCACTTC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSADSV*TGLSHF
Trigger: GAAGTGAGATAGCCCAGTCCAGACACTATCAGCAGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAATTACTTGGACTTGTTaGGTAAAGTCGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPITWTC*VKSCSM
Trigger: CATGCTGCACGACTTTACCCAACAAGTCCAAGTAAT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTTGAAGATAGAGCTGTaGGTAGTTCCCAGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNILKIEL*VVPSSR
Trigger: CCTGCTACTGGGAACTACCCACAGCTCTATCTTCAA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGAAGCTCTCCAGTTTCTaGACTGCAATGGCTCTTACA +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWKLSSF*TAMALT
Trigger: TGTAAGAGCCATTGCAGTTCAGAAACTGGAGAGCTT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGAAGCTTTCGGGGAGTTaGGAATTCTGCAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWKLSGS*EFCRFS
Trigger: TGAAAACCTGCAGAATTCTCAACTCCCCGAAAGCTT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATATTTTGTCACCAGTTaGAATGCAACCATATGGCAG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPYFVTS*NATIWQ
Trigger: CTGCCATATGGTTGCATTTCAACTGGTGACAAAATA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTGCCCGAAGTCAATATaGAATAGGTTTCCTGTCTCG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNICPKSI*NRFPVS
Trigger: CGAGACAGGAAACCTATTTCATATTGACTTCGGGCA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTTAACACAGATGTCCTaGAATTTCTGGAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCLTQMS*NFWKCG
Trigger: CCCACACTTCCAGAAATTTCAGGACATCTGTGTTAA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGTTTCTCTCCTTGTTTaGTGCCAAGAACAAGATGTA +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPVSLLV*CQEQDV
Trigger: TACATCTTGTTCTTGGCATCAAACAAGGAGAGAAAC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTCTTGTGGACAGAGTTaGCACAAAAAGTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCSCGQS*HKKSHL
Trigger: GAGATGAGACTTTTTGTGTCAACTCTGTCCACAAGA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACAATTCTTTGTCCTCTaGTGTGAGAGGGTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPQFFVL*CERVKW
Trigger: CCACTTAACCCTCTCACAGCAGAGGACAAAGAATTG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCAATTCTTTGTCCTCTaGTGTGAGAGGGTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIQFFVL*CERVKW
Trigger: CCACTTAACCCTCTCACAGCAGAGGACAAAGAATTG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCTCCAGTTTCTGAACTaGAATGGCTCTTACATTTTC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCLQFLN*NGSYIF
Trigger: GAAAATGTAAGAGCCATTGCAGTTCAGAAACTGGAG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTTTACATTTTTCAATTaGCAGCGCTCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCFTFFN*QRSCFQ
Trigger: CTGAAAGCAGGAGCGCTGGCAATTGAAAAATGTAAA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATTTACATTTTTCAATTaGCAGCGCTCCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPFTFFN*QRSCFQ
Trigger: CTGAAAGCAGGAGCGCTGGCAATTGAAAAATGTAAA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGACTTCATCTTTAAATaGTCCCGTGTTGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPDFIFK*SRVAHC
Trigger: ACAGTGGGCAACACGGGAGCATTTAAAGATGAAGTC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAATCTCTCCACTGCTaGCTGAAACTTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAKSLHC*LKLFFS
Trigger: ACTGAAGAAAAGTTTCAGGCAGCAGTGGAGAGATTT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTGCCACACAGTAGCCTaGACAGGAATAAACAAATCT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYACHTVA*TGINKS
Trigger: AGATTTGTTTATTCCTGTGCAGGCTACTGTGTGGCA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTCCATCCTTTGTCTCTaGAAACTTCGATCTGATCAA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNASILCL*KLRSDQ
Trigger: TTGATCAGATCGAAGTTTGCAGAGACAAAGGATGGA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATCCATCCTTTGTCTCTaGAAACTTCGATCTGATCAA +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPSILCL*KLRSDQ
Trigger: TTGATCAGATCGAAGTTTGCAGAGACAAAGGATGGA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTGCTATACTTCTGAAATaGCAGCTTTCACAATGTCTA +
Preference number: 4 (lower is better)
Translates to: IELWVVPSSRMILVLEHFAILLK*QLSQCL
Trigger: TAGACATTGTGAAAGCTGGCATTTCAGAAGTATAGC...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCCAAACAATCAGCAATaGCAACATCTTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAPNNQQ*QHLFSR
Trigger: CCTGGAGAAAAGATGTTGGCATTGCTGATTGTTTGG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGGTAGTTACTTCCTGCTaGCATGCTGGAGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWVVTSC*HAGESY
Trigger: ATAGCTTTCTCCAGCATGGCAGCAGGAAGTAACTAC...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAAATCCTGTTCGCTTTaGCTTTCGGGAATATCCATC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCKSCSL*LSGISI
Trigger: GATGGATATTCCCGAAAGCCAAAGCGAACAGGATTT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCACTTGTTGCCCATGCTaGATGTTTGCCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCTCCPC*MFASTK
Trigger: TTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTACTTGTTGCCCATGCTaGATGTTTGCCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYATCCPC*MFASTK
Trigger: TTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGGCGCTATCATGGTATaGTTCAAATTTCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIGAIMV*FKFHSL
Trigger: CAGGCTGTGAAATTTGAACCATACCATGATAGCGCC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGCAAGGGCGCTATCATaGTATGGTTCAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAARALS*YGSNFT
Trigger: TGTGAAATTTGAACCATACCATGATAGCGCCCTTGC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTATTACTTGGACTTGTTaGGTAAAGTCGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAITWTC*VKSCSM
Trigger: CATGCTGCACGACTTTACCCAACAAGTCCAAGTAAT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACAGTCCAGGATCATATaGAACTCTAAAGCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPQSRII*NSKAFG
Trigger: CCCGAAAGCTTTAGAGTTCCATATGATCCTGGACTG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTATTTTGTCACCAGTTaGAATGCAACCATATGGCAG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAYFVTS*NATIWQ
Trigger: CTGCCATATGGTTGCATTTCAACTGGTGACAAAATA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTTAACACAGATGTCCTaGAATTTCTGGAAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNILTQMS*NFWKCG
Trigger: CCCACACTTCCAGAAATTTCAGGACATCTGTGTTAA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTCATGGAGAACAGGATaGTCAGTAGGTTTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNISWRTG*SVGLCD
Trigger: ATCACACAAACCTACTGATCATCCTGTTCTCCATGA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGTTTCTCTCCTTGTTTaGTGCCAAGAACAAGATGTA +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCVSLLV*CQEQDV
Trigger: TACATCTTGTTCTTGGCATCAAACAAGGAGAGAAAC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGCATCATTTAAGGAATaGGACAAAGGTTACAACGAT +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFASFKE*DKGYND
Trigger: ATCGTTGTAACCTTTGTCTCATTCCTTAAATGATGC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR TCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGAAAACATCCTCTTCTaGATTAGAAAGTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCENILF*IRKYSS
Trigger: GGAAGAGTACTTTCTAATTCAGAAGAGGATGTTTTC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCTCCAGTTTCTGAACTaGAATGGCTCTTACATTTTC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALQFLN*NGSYIF
Trigger: GAAAATGTAAGAGCCATTGCAGTTCAGAAACTGGAG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATGCCACACAGTAGCCTaGACAGGAATAAACAAATCT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPCHTVA*TGINKS
Trigger: AGATTTGTTTATTCCTGTGCAGGCTACTGTGTGGCA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTATTCAATGTCTTCTTTaGTTGTTAACTGGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCIQCLL*LLTGAF
Trigger: GAATGCCCCAGTTAACAAGCAAAGAAGACATTGAAT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAGAAACCAATTAAACTaGACAGTCCATCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCRNQLN*TVHPLS
Trigger: AGACAAAGGATGGACTGTGCAGTTTAATTGGTTTCT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGCTATACTTCTGAAATaGCAGCTTTCACAATGTCTA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAAILLK*QLSQCL
Trigger: TAGACATTGTGAAAGCTGGCATTTCAGAAGTATAGC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAAATCCTGTTCGCTTTaGCTTTCGGGAATATCCATC +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPKSCSL*LSGISI
Trigger: GATGGATATTCCCGAAAGCCAAAGCGAACAGGATTT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGACTTGTTGCCCATGCTaGATGTTTGCCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWTCCPC*MFASTK
Trigger: TTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTACAATTGGTATGTTTTaGCCACAATTTCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCTIGMF*PQFLAV
Trigger: GACAGCAAGAAATTGTGGCCAAAACATACCAATTGT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCTTCTGGCCAACAATTaGTATGTTTTGGCCACAATT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALLANN*YVLATI
Trigger: AATTGTGGCCAAAACATACCAATTGTTGGCCAGAAG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGTTTCTGAACTGCAATaGCTCTTACATTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPVSELQ*LLHFHL
Trigger: CAGATGAAAATGTAAGAGCCATTGCAGTTCAGAAAC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGGCAAGGGCGCTATCATaGTATGGTTCAAATTTCACA +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWARALS*YGSNFT
Trigger: TGTGAAATTTGAACCATACCATGATAGCGCCCTTGC...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTAACATCTCGATTACTTaGACTTGTTGGGTAAAGTCG +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYANISIT*TCWVKS
Trigger: CGACTTTACCCAACAAGTCCAAGTAATCGAGATGTT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAACATCTCGATTACTTaGACTTGTTGGGTAAAGTCG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCNISIT*TCWVKS
Trigger: CGACTTTACCCAACAAGTCCAAGTAATCGAGATGTT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAAAATAAGCATGTCTTaGCGCAGATCATCACCATGT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCKISMS*RRSSPC
Trigger: ACATGGTGATGATCTGCGCCAAGACATGCTTATTTT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATGCTTTGCTGAATTTTaGCAATTGTCGTGGCGTCTT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPCFAEF*QLSWRL
Trigger: AAGACGCCACGACAATTGCCAAAATTCAGCAAAGCA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
3UTR CAA 72 bp GCTATACTTCTGAAATGCCAGCTTTCACAATGTCTATaGCATTTGAAATCCAAGTTCGATGATTGCTATGCT +
Preference number: 4 (lower is better)
Translates to: AILLKCQLSQCL*HLKSKFDDCYA
Trigger: AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTTCAGAAGTATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTTTTCTTTGAGCCAGTaGTTCAGGACTTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAFSLSQ*FRTSSL
Trigger: TAAAGATGAAGTCCTGAATCACTGGCTCAAAGAAAA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCTTTCGTATCTAAAATaGCAGAGCAATTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCLSYLK*QSNSLS
Trigger: GGACAAAGAATTGCTCTGGCATTTTAGATACGAAAG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCTCCAGTTTCTGAACTaGAATGGCTCTTACATTTTC +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNILQFLN*NGSYIF
Trigger: GAAAATGTAAGAGCCATTGCAGTTCAGAAACTGGAG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGAAATCTCTCCACTGCTaGCTGAAACTTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWKSLHC*LKLFFS
Trigger: ACTGAAGAAAAGTTTCAGGCAGCAGTGGAGAGATTT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCATTCAATGTCTTCTTTaGTTGTTAACTGGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCIQCLL*LLTGAF
Trigger: GAATGCCCCAGTTAACAAGCAAAGAAGACATTGAAT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTAGAAACCAATTAAACTaGACAGTCCATCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYARNQLN*TVHPLS
Trigger: AGACAAAGGATGGACTGTGCAGTTTAATTGGTTTCT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGAGAATATTCTCCAATaGCACAGACAAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPENILQ*HRQMRK
Trigger: TTTTCTCATTTGTCTGTGGCATTGGAGAATATTCTC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGAGAATATTCTCCAATaGCACAGACAAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAENILQ*HRQMRK
Trigger: TTTTCTCATTTGTCTGTGGCATTGGAGAATATTCTC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR GCA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGAGAATATTCTCCAATaGCACAGACAAATGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFENILQ*HRQMRK
Trigger: TTTTCTCATTTGTCTGTGGCATTGGAGAATATTCTC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAATTGTCCAGAAGAATaGAGATGGACATTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCNCPEE*RWTLSS
Trigger: AGAACTCAATGTCCATCTCCATTCTTCTGGACAATT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTAATTGTCCAGAAGAATaGAGATGGACATTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYANCPEE*RWTLSS
Trigger: AGAACTCAATGTCCATCTCCATTCTTCTGGACAATT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTACAATTGGTATGTTTTaGCCACAATTTCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYATIGMF*PQFLAV
Trigger: GACAGCAAGAAATTGTGGCCAAAACATACCAATTGT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACTTCTGGCCAACAATTaGTATGTTTTGGCCACAATT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPLLANN*YVLATI
Trigger: AATTGTGGCCAAAACATACCAATTGTTGGCCAGAAG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGTTTCTGAACTGCAATaGCTCTTACATTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCVSELQ*LLHFHL
Trigger: CAGATGAAAATGTAAGAGCCATTGCAGTTCAGAAAC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAGTTGTGAAATAACTTaGGAACTGACGTCATACTTT +
Preference number: 4 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSCEIT*ELTSYF
Trigger: AAAGTATGACGTCAGTTCCCAAGTTATTTCACAACT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGATAACTCACTCTTGTaGACAGAGTTGACACAAAAA +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCDNSLL*TELTQK
Trigger: TTTTTGTGTCAACTCTGTCCACAAGAGTGAGTTATC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAAAAATATTGATGTCTaGGTCTCATCCCACAGTAAT +
Preference number: 4 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPKNIDV*VSSHSN
Trigger: ATTACTGTGGGATGAGACCCAGACATCAATATTTTT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGGTCTTCTGTACAGGTaGGTAGAGTGTGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIGLLYR*VECDFK
Trigger: TTTAAAATCACACTCTACCCACCTGTACAGAAGACC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATTTTCTTTGAGCCAGTaGTTCAGGACTTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPFSLSQ*FRTSSL
Trigger: TAAAGATGAAGTCCTGAATCACTGGCTCAAAGAAAA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR TCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAATCTAGAAAAATATTaGTGTCTGGGTCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPNLEKY*CLGLIP
Trigger: TGGGATGAGACCCAGACATCAATATTTTTCTAGATT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR TCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTAATCTGTACAAGGTCTaGACTTGGCTATTGTTTATC +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNINLYKV*TWLLFI
Trigger: GATAAACAATAGCCAAGTTCAGACCTTGTACAGATT...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGCTATACTTCTGAAATaGCAGCTTTCACAATGTCTA +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPAILLK*QLSQCL
Trigger: TAGACATTGTGAAAGCTGGCATTTCAGAAGTATAGC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTAATTGTCCAGAAGAATaGAGATGGACATTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNINCPEE*RWTLSS
Trigger: AGAACTCAATGTCCATCTCCATTCTTCTGGACAATT...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGACAATTGGTATGTTTTaGCCACAATTTCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SYRVKVFLKISQVCKELWTIGMF*PQFLAV
Trigger: GACAGCAAGAAATTGTGGCCAAAACATACCAATTGT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CCA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAGTTGTGAAATAACTTaGGAACTGACGTCATACTTT +
Preference number: 4 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCSCEIT*ELTSYF
Trigger: AAAGTATGACGTCAGTTCCCAAGTTATTTCACAACT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCCTTTAAATGGGAAATaGATAAGGCAAGTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIPLNGK*IRQVVF
Trigger: GAACACTACTTGCCTTATCCATTTCCCATTTAAAGG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR GCA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATTTAAAAGGACAGGTTaGCAAAGAAGAGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPFKRTG*QRRGVF
Trigger: AAAAACTCCTCTTCTTTGGCAACCTGTCCTTTTAAA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR GCA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGATATACATAAAAGTTaGTTTGGCCTGATTCATCTG +
Preference number: 4 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIDIHKS*FGLIHL
Trigger: CAGATGAATCAGGCCAAAGCAACTTTTATGTATATC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS GCA 90 bp GCCGTGAGCTGCCGCTGGAAGGCTTGGGACTCCTCGGAGGGCGGGTaGCGCTGCACCAGGTGGATCTGGCCCGGGCTCCGGTGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: AVSCRWKAWDSSEGG*RCTRWIWPGLRCVA
Trigger: GGCCACGCACCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCAGCTCACGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp AGCTGCCGCTGGAAGGCTTGGGACTCCTCGGAGGGCGGGTGCCGCTaGACCAGGTGGATCTGGCCCGGGCTCCGGTGCGTGGCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SCRWKAWDSSEGGCR*TRWIWPGLRCVAFQ
Trigger: CTGGAAGGCCACGCACCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp GCCACGCTGGTCTCCAGCGCTCGCAGCCACACCTGGGCCTTCATCTaGTCCACGTTGCCGTGGCCGGCCACGTGCAGCAGCGCCGTTTCG +
Preference number: 5 (lower is better)
Translates to: ATLVSSARSHTWAFI*STLPWPATCSSAVS
Trigger: CGAAACGGCGCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGCGCTGGAGACCAGCGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp GCGGGTGCCGCTGCACCAGGTGGATCTGGCCCGGGCTCCGGTGCGTaGCCTTCCAGTAGCGCAGGCAGTCCAGAGTCTGCACCACCTGGT +
Preference number: 5 (lower is better)
Translates to: AGAAAPGGSGPGSGA*PSSSAGSPESAPPG
Trigger: ACCAGGTGGTGCAGACTCTGGACTGCCTGCGCTACTGGAAGGCCACGCACCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCACCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp TCCACAGGTACTCCGGGAGGGGCTTGGACGTCACCCACGGGTGCATaGCGTAGAGCTTGGGGTCGCGGCTGGCCACCTCCGCCATGCGCG +
Preference number: 5 (lower is better)
Translates to: STGTPGGAWTSPTGA*RRAWGRGWPPPPCA
Trigger: CGCGCATGGCGGAGGTGGCCAGCCGCGACCCCAAGCTCTACGCCATGCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGTACCTGTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp TCTCCAGCGCTCGCAGCCACACCTGGGCCTTCATCTGCTCCACGTTaGCGTGGCCGGCCACGTGCAGCAGCGCCGTTTCGGGGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SPALAATPGPSSAPR*RGRPRAAAPFRGSC
Trigger: GCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGCGCTGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp CACACCTGGGCCTTCATCTGCTCCACGTTGCCGTGGCCGGCCACGTaGAGCAGCGCCGTTTCGGGGCTCTTGCATTTGCGCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HTWAFICSTLPWPAT*SSAVSGLLHLRWLV
Trigger: CACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp GGAAGTGATGCGGTCCCAGCCGGTGGTAGAAGTCCGCCGCCACGCTaGTCTCCAGCGCTCGCAGCCACACCTGGGCCTTCATCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GSDAVPAGGRSPPPR*SPALAATPGPSSAP
Trigger: TGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGCGCTGGAGACCAGCGTGGCGGCGGACTTCTACCACCGGCTGGGACCGCATCACTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp CCGGCCACGTGCAGCAGCGCCGTTTCGGGGCTCTTGCATTTGCGCTaGCTGGTGGGCAGCACGAACTCGATGGGGATGAGCTCCATGGAG +
Preference number: 5 (lower is better)
Translates to: PATCSSAVSGLLHLR*LVGSTNSMGMSSME
Trigger: CTCCATGGAGCTCATCCCCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 90 bp TCTTGCATTTGCGCTGGCTGGTGGGCAGCACGAACTCGATGGGGATaGGCTCCATGGAGGACAGGCTGGCCGCAGCACTGCGCGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SCICAGWWAARTRWG*APWRTGWPQHCAAS
Trigger: TGAAGCCGCGCAGTGCTGCGGCCAGCCTGTCCTCCATGGAGCTCATCCCCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp TGCAGTTGTTGGCAATCTTCTTCCACAGGTACTCCGGGAGGGGCTTaGACGTCACCCACGGGTGCATGGCGTAGAGCTTGGGGTCGCGGC +
Preference number: 5 (lower is better)
Translates to: CSCWQSSSTGTPGGA*TSPTGAWRRAWGRG
Trigger: GCCGCGACCCCAAGCTCTACGCCATGCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGTACCTGTGGAAGAAGATTGCCAACAACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAACTGCCGCTGGAAGGCTaGGGACTCCTCGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: TQCWSHGPMQSHRASCSELPLEG*GLLGGR
Trigger: CCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCAG...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS TCA 90 bp CTTGGTGAAGAAGCTCTGCAGGATGGCGCCGGGGGTGTCGTCGGGTaGGACCTTAATGGTCTGGCTGGTGGTGCTGCGGTGAATGACGAT +
Preference number: 5 (lower is better)
Translates to: LGEEALQDGAGGVVG*DLNGLAGGAAVNDD
Trigger: ATCGTCATTCACCGCAGCACCACCAGCCAGACCATTAAGGTCTCACCCGACGACACCCCCGGCGCCATCCTGCAGAGCTTCTTCACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 90 bp CTCACCTCGTCTAGGGCCGGGTCTGGAGGCGTGTCCAGTACCACGTaGATCTCTTCTCCGTTCTTGAGGCAGTGCCTCACCCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: LTSSRAGSGGVSSTT*ISSPFLRQCLTHWK
Trigger: CTTCCAGTGGGTGAGGCACTGCCTCAAGAACGGAGAAGAGATTCACGTGGTACTGGACACGCCTCCAGACCCGGCCCTAGACGAGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp GGCTATGATCGCCTCCAATTGCTTGCGAAGCTGGTTGGGCATTTCTaGTCGAACCCGGTCCCCTTCCGGGTCAGGGGTGGGCTGATGCTT +
Preference number: 5 (lower is better)
Translates to: GYDRLQLLAKLVGHF*SNPVPFRVRGGLML
Trigger: AAGCATCAGCCCACCCCTGACCCGGAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCGCCGTTTCGGGGCTCTaGCATTTGCGCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCAVSGL*HLRWLV
Trigger: CACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGC...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS CCA 90 bp TTAAGTGGATCAGTGGCTATGATCGCCTCCAATTGCTTGCGAAGCTaGTTGGGCATTTCTGCTCGAACCCGGTCCCCTTCCGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSGSVAMIASNCLRS*LGISARTRSPSGSG
Trigger: CCCTGACCCGGAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 90 bp GGCTTTCGGGAATATCCATCAGAGATTTCTTCTTGGCCATCTTGGTaGAGAAGCTCTGCAGGATGGCGCCGGGGGTGTCGTCGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: GFREYPSEISSWPSW*RSSAGWRRGCRRVR
Trigger: TCTCACCCGACGACACCCCCGGCGCCATCCTGCAGAGCTTCTTCACCAAGATGGCCAAGAAGAAATCTCTGATGGATATTCCCGAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp GCTGTGAGAGGGTTAAGTGGATCAGTGGCTATGATCGCCTCCAATTaGTTGCGAAGCTGGTTGGGCATTTCTGCTCGAACCCGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: AVRGLSGSVAMIASN*LRSWLGISARTRSP
Trigger: AGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAACCCTCTCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp GCTGGTTCTCCTTTGGCAAAGGACTTGTTGCCCATGCTGGATGTTTaGCTCTACAAAAACTGTGAGGTCGGTGTTCCGAGGCAGGACGGG +
Preference number: 5 (lower is better)
Translates to: AGSPLAKDLLPMLDV*LYKNCEVGVPRQDG
Trigger: CCCGTCCTGCCTCGGAACACCGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCGGCGCCTTCGGCAGTaGTCCTCTCTCAGCACCACG +
Preference number: 5 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFRRLRQ*SSLSTT
Trigger: CGTGGTGCTGAGAGAGGACAACTGCCGAAGGCGCCG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS TCA 90 bp GTGTCGTCGGGTGAGACCTTAATGGTCTGGCTGGTGGTGCTGCGGTaGATGACGATGAAGATGCAGTTGTTGGCAATCTTCTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: VSSGETLMVWLVVLR*MTMKMQLLAIFFHR
Trigger: CCTGTGGAAGAAGATTGCCAACAACTGCATCTTCATCGTCATTCACCGCAGCACCACCAGCCAGACCATTAAGGTCTCACCCGACGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp ATATCCATCAGAGATTTCTTCTTGGCCATCTTGGTGAAGAAGCTCTaGAGGATGGCGCCGGGGGTGTCGTCGGGTGAGACCTTAATGGTC +
Preference number: 5 (lower is better)
Translates to: ISIRDFFLAILVKKL*RMAPGVSSGETLMV
Trigger: GACCATTAAGGTCTCACCCGACGACACCCCCGGCGCCATCCTGCAGAGCTTCTTCACCAAGATGGCCAAGAAGAAATCTCTGATGGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp ATAGAGAAGCTGAACTTTGCCCTTGGACTCAGAACTGGGGGACTCTaGAGAGGCCTTGCTGGACAGTGCTGGAGCTTTACCGCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: IEKLNFALGLRTGGL*RGLAGQCWSFTAVD
Trigger: ATCTACTGCGGTAAAGCTCCAGCACTGTCCAGCAAGGCCTCTGCAGAGTCCCCCAGTTCTGAGTCCAAGGGCAAAGTTCAGCTTCTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp GGTTTGGGGCTGGTTCTCCTTTGGCAAAGGACTTGTTGCCCATGCTaGATGTTTGCCTCTACAAAAACTGTGAGGTCGGTGTTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: GLGLVLLWQRTCCPC*MFASTKTVRSVFRG
Trigger: GCCTCGGAACACCGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGCCGTTTCGGGGCTCTaGCATTTGCGCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFAVSGL*HLRWLV
Trigger: CACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCAGCATTGAAGCTTCCTaGGTCTTCTCCCTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCSIEAS*VFSLPR
Trigger: TCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCT...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS GCA 90 bp AAGGGTTTGGGGCTGGTTCTCCTTTGGCAAAGGACTTGTTGCCCATaGTGGATGTTTGCCTCTACAAAAACTGTGAGGTCGGTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: KGLGLVLLWQRTCCP*WMFASTKTVRSVFR
Trigger: TCGGAACACCGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp TCTGTGAAGGGTTTGGGGCTGGTTCTCCTTTGGCAAAGGACTTGTTaGCCATGCTGGATGTTTGCCTCTACAAAAACTGTGAGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SVKGLGLVLLWQRTC*PCWMFASTKTVRSV
Trigger: CACCGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp TTCCACAGCACCTCCTCTGTGAAGGGTTTGGGGCTGGTTCTCCTTTaGCAAAGGACTTGTTGCCCATGCTGGATGTTTGCCTCTACAAAA +
Preference number: 5 (lower is better)
Translates to: FHSTSSVKGLGLVLL*QRTCCPCWMFASTK
Trigger: TTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGAGGTGCTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTTTCATCTGCTCCACGTaGCCGTGGCCGGCCACGTGC +
Preference number: 5 (lower is better)
Translates to: IELWVVPSSRMILVLEHFFICST*PWPATC
Trigger: GCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAA...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCTGCCGCTGGAAGGCTaGGGACTCCTCGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALPLEG*GLLGGR
Trigger: CCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCAG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTACTCCGGGAGGGGCTaGGACGTCACCCACGGGTGC +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAYSGRG*DVTHGC
Trigger: GCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGTA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTTACTCCGGGAGGGGCTaGGACGTCACCCACGGGTGC +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFYSGRG*DVTHGC
Trigger: GCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGTA...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACATCTTGACCCTGAACTaGCGGTCGCAGTCCCACAGG +
Preference number: 5 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDILTLN*RSQSHR
Trigger: CCTGTGGGACTGCGACCGCAAGTTCAGGGTCAAGAT...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAAGTTGCAGACGTGAGTTaGTCAGCATTGAAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEVADVS*SALKLP
Trigger: AGGAAGCTTCAATGCTGACAAACTCACGTCTGCAAC...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAAGACATTGAGTTCTCCTaGTCTGGGTTAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEDIEFS*SGLVAD
Trigger: GTCTGCAACTAACCCAGACAAGGAGAACTCAATGTC...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS CCA 90 bp TACTCATCCCGGCCACAGACGCGCAGCACAAAATCCTGTTCGCTTTaGCTTTCGGGAATATCCATCAGAGATTTCTTCTTGGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: YSSRPQTRSTKSCSL*LSGISIRDFFLAIL
Trigger: CAAGATGGCCAAGAAGAAATCTCTGATGGATATTCCCGAAAGCCAAAGCGAACAGGATTTTGTGCTGCGCGTCTGTGGCCGGGATGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTCGGCGCCTTCGGCAGTaGTCCTCTCTCAGCACCACG +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCRRLRQ*SSLSTT
Trigger: CGTGGTGCTGAGAGAGGACAACTGCCGAAGGCGCCG...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTCGGCGCCTTCGGCAGTaGTCCTCTCTCAGCACCACG +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFRRLRQ*SSLSTT
Trigger: CGTGGTGCTGAGAGAGGACAACTGCCGAAGGCGCCG...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTCGGGGCTCTTGCATTaGCGCTGGCTGGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNASGLLH*RWLVGS
Trigger: GCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATTCATCTGCTCCACGTaGCCGTGGCCGGCCACGTGC +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPFICST*PWPATC
Trigger: GCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCTGCCGCTGGAAGGCTaGGGACTCCTCGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNILPLEG*GLLGGR
Trigger: CCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCAG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACTGCTTGCGAAGCTGGTaGGGCATTTCTGCTCGAACC +
Preference number: 5 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDCLRSW*GISART
Trigger: GGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCA...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAATTTTCATCTGAGAAGTaGCAGTCCAGGAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEFSSEK*QSRSCI
Trigger: AATGCAGCTCCTGGACTGCAACTTCTCAGATGAAAA...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAAAAAGCTTTCGGGGAGTaGAGAATTCTGCAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: TQCWSHGPMQSHRASCSEKAFGE*RILQVF
Trigger: GAAAACCTGCAGAATTCTCAACTCCCCGAAAGCTTT...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS TCA 90 bp GGCTATCGGGTGGCAGTAATTGTCCAGAAGAATGGAGATGGACATTaGGTTCTCCTTGTCTGGGTTAGTTGCAGACGTGAGTTTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GYRVAVIVQKNGDGH*VLLVWVSCRREFVS
Trigger: GCTGACAAACTCACGTCTGCAACTAACCCAGACAAGGAGAACTCAATGTCCATCTCCATTCTTCTGGACAATTACTGCCACCCGATAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp TCTGGGTTAGTTGCAGACGTGAGTTTGTCAGCATTGAAGCTTCCTTaGTCTTCTCCCTTCCCAGATATCTGCCACATGTGGAGGACGTAT +
Preference number: 5 (lower is better)
Translates to: SGLVADVSLSALKLP*SSPFPDICHMWRTY
Trigger: ATACGTCCTCCACATGTGGCAGATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAACTAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTCGGGGCTCTTGCATTaGCGCTGGCTGGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCSGLLH*RWLVGS
Trigger: GCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGCCGTTTCGGGGCTCTaGCATTTGCGCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCAVSGL*HLRWLV
Trigger: CACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATACTCCGGGAGGGGCTaGGACGTCACCCACGGGTGC +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPYSGRG*DVTHGC
Trigger: GCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGTA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACTCAATGCCTCTGATCTaGACCCTGAACTTGCGGTCG +
Preference number: 5 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDSMPLI*TLNLRS
Trigger: CGACCGCAAGTTCAGGGTCAAGATCAGAGGCATTGA...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCCTTTACATTTTTCAATaGCCAGCGCTCCTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCLYIFQ*PALLLS
Trigger: TGAAAGCAGGAGCGCTGGCAATTGAAAAATGTAAAG...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp GAACACCAAAGCCATCATTCAGACCCACACAGTGCTGGTCTCATGGACCCATGCTCGGTGATCATAATATaGTCATTGTGTCTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: EHQSHHSDPHSAGLMDPCSVIII*SLCLSP
Trigger: AGGCGACAGACACAATGACAATATTATGATCACCGA...GCATGGGTCCATGAGACCAGCACTGTGTGGGTCTGAATGATGGCTTTGGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACGTGGGAGCATCGCAATaGATGAAAAAGGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDVGASQ*MKKGGR
Trigger: CCTGCCTCCCTTTTTCATCAATTGCGATGCTCCCAC...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS TCA 90 bp TTGCAGTCCAGGAGCTGCATTGTTAACCCAACATCCAAAGCACTTTaGTCCCAGACTTCCCTTCTGGCCAACAATTGGTATGTTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LQSRSCIVNPTSKAL*SQTSLLANNWYVLA
Trigger: GGCCAAAACATACCAATTGTTGGCCAGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGTTGGGTTAACAATGCAGCTCCTGGACTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp AAAATGCCAGAGCAATTCTTTGTCCTCTGCTGTGAGAGGGTTAAGTaGATCAGTGGCTATGATCGCCTCCAATTGCTTGCGAAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: KMPEQFFVLCCERVK*ISGYDRLQLLAKLV
Trigger: AACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAACCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp GCAGAACATCATCGTCCTCCAAGCTCTCCAGTTTCTGAACTGCAATaGCTCTTACATTTTCATCTGAGAAGTTGCAGTCCAGGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: AEHHRPPSSPVSELQ*LLHFHLRSCSPGAA
Trigger: TGCAGCTCCTGGACTGCAACTTCTCAGATGAAAATGTAAGAGCCATTGCAGTTCAGAAACTGGAGAGCTTGGAGGACGATGATGTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATTCATCTGCTCCACGTaGCCGTGGCCGGCCACGTGC +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPFICST*PWPATC
Trigger: GCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACTTCTTCTTGGCCATCTaGGTGAAGAAGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDFFLAI*VKKLCR
Trigger: CCTGCAGAGCTTCTTCACCAAGATGGCCAAGAAGAA...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACTTGGCAAAGGACTTGTaGCCCATGCTGGATGTTTGC +
Preference number: 5 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDLAKDL*PMLDVC
Trigger: GCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAA...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ACACAGTGCTGGTCTCATGGACCCATGCAGTCACACAGAGCCTCATGCTCAGAACTATTTTGTCACCAGTaGAAATGCAACCATATGGCA +
Preference number: 5 (lower is better)
Translates to: TQCWSHGPMQSHRASCSELFCHQ*KCNHMA
Trigger: TGCCATATGGTTGCATTTCAACTGGTGACAAAATAG...TTCTGAGCATGAGGCTCTGTGTGACTGCATGGGTCCATGAGACCAGCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCGTTGCCCACTGTGCTTaGCTGAATTTTGGCAATTGT +
Preference number: 5 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRVAHCA*LNFGNC
Trigger: ACAATTGCCAAAATTCAGCAAAGCACAGTGGGCAAC...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTACACTCTCGTGGTCCTaGCCGTGGATGGTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCTLSWS*PWMVSC
Trigger: GCAGCTTACCATCCACGGCAAGGACCACGAGAGTGT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACACTCTCGTGGTCCTaGCCGTGGATGGTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNATLSWS*PWMVSC
Trigger: GCAGCTTACCATCCACGGCAAGGACCACGAGAGTGT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAACACTCTCGTGGTCCTaGCCGTGGATGGTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPTLSWS*PWMVSC
Trigger: GCAGCTTACCATCCACGGCAAGGACCACGAGAGTGT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTATCTTGACCCTGAACTaGCGGTCGCAGTCCCACAGG +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFILTLN*RSQSHR
Trigger: CCTGTGGGACTGCGACCGCAAGTTCAGGGTCAAGAT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTATCTTGACCCTGAACTaGCGGTCGCAGTCCCACAGG +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCILTLN*RSQSHR
Trigger: CCTGTGGGACTGCGACCGCAAGTTCAGGGTCAAGAT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GAACATTTTGACCCAGGCACTACATTTACCACTCATGCAGACGTGGTAGACCGCGGCAAGTCTTTGATTTaGATACTGAACTCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: EHFDPGTTFTTHADVVDRGKSLI*ILNSSH
Trigger: GTGGCTTGAGTTCAGTATCAAAATCAAAGACTTGCC...GCGGTCTACCACGTCTGCATGAGTGGTAAATGTAGTGCCTGGGTCAAAATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS GCA 90 bp CTTAAGGCTTTCGTATCTAAAATGCCAGAGCAATTCTTTGTCCTCTaGTGTGAGAGGGTTAAGTGGATCAGTGGCTATGATCGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LKAFVSKMPEQFFVL*CERVKWISGYDRLQ
Trigger: TTGGAGGCGATCATAGCCACTGATCCACTTAACCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCATTTTAGATACGAAAGCCTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp TTGTTAACCCAACATCCAAAGCACTTTGATCCCAGACTTCCCTTCTaGCCAACAATTGGTATGTTTTGGCCACAATTTCTTGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLTQHPKHFDPRLPF*PTIGMFWPQFLAVP
Trigger: GGGGACAGCAAGAAATTGTGGCCAAAACATACCAATTGTTGGCCAGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGTTGGGTTAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp TCAGATAGGCTTCCAGAATCACAGCGAACCTCTGCTGATAGTGTCTaGACTGGGCTATCTCACTTCTCAAGAACCAAAACAAAAAGTGAC +
Preference number: 5 (lower is better)
Translates to: SDRLPESQRTSADSV*TGLSHFSRTKTKSD
Trigger: GTCACTTTTTGTTTTGGTTCTTGAGAAGTGAGATAGCCCAGTCCAGACACTATCAGCAGAGGTTCGCTGTGATTCTGGAAGCCTATCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6
CDS CCA 90 bp AGCGATTTAATATCAAGGGTGACTTTTTGTAACATCTCGATTACTTaGACTTGTTGGGTAAAGTCGTGCAGCATGGCTGTGCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: SDLISRVTFCNISIT*TCWVKSCSMAVPQP
Trigger: GGGCTGTGGCACAGCCATGCTGCACGACTTTACCCAACAAGTCCAAGTAATCGAGATGTTACAAAAAGTCACCCTTGATATTAAATCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6
CDS CCA 90 bp GTGAGGGCATCCCGGATATATTCAATGTCTTCTTTGCTTGTTAACTaGGGCATTCCTGTCATCAGCATCATGGAGAACAGGATGATCAGT +
Preference number: 5 (lower is better)
Translates to: VRASRIYSMSSLLVN*GIPVISIMENRMIS
Trigger: ACTGATCATCCTGTTCTCCATGATGCTGATGACAGGAATGCCCCAGTTAACAAGCAAAGAAGACATTGAATATATCCGGGATGCCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTACCCACTGGAAGTTTTaGATGGGCGTTTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFTHWKF*MGVSPT
Trigger: GGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGGT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACCCACTGGAAGTTTTaGATGGGCGTTTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNATHWKF*MGVSPT
Trigger: GGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGGT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTACCCACTGGAAGTTTTaGATGGGCGTTTCGCCCACC +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCTHWKF*MGVSPT
Trigger: GGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGGT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGGGGCTGGTTCTCCTTaGGCAAAGGACTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAGAGSP*AKDLLP
Trigger: GGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGGGGCTGGTTCTCCTTaGGCAAAGGACTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCGAGSP*AKDLLP
Trigger: GGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTTCCTCTGTGAAGGGTTaGGGGCTGGTTCTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFSSVKG*GLVLLW
Trigger: CCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGA...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTAAAGCTTTCGGGGAGTaGAGAATTCTGCAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFKAFGE*RILQVF
Trigger: GAAAACCTGCAGAATTCTCAACTCCCCGAAAGCTTT...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS GCA 90 bp ATGAGAAGATGTTGGAAACACTGTAAGTACAGTAATCTTGAAGCATaGACTTGTAGGAATATGAAGCCTGGCTGCCGTGCCCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: MRRCWKHCKYSNLEA*TCRNMKPGCRALPF
Trigger: AAAAGGGAGGGCACGGCAGCCAGGCTTCATATTCCTACAAGTGCATGCTTCAAGATTACTGTACTTACAGTGTTTCCAACATCTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTCATCGTCGTGCACGTaGCTGACGTCAGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYASSSCT*LTSVTS
Trigger: TGACGTCACTGACGTCAGCAACGTGCACGACGATGA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTCAATGCCTCTGATCTaGACCCTGAACTTGCGGTCG +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSMPLI*TLNLRS
Trigger: CGACCGCAAGTTCAGGGTCAAGATCAGAGGCATTGA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGGGGGCTGGTTCTCCTTaGGCAAAGGACTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWGAGSP*AKDLLP
Trigger: GGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCC...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTCCTCTGTGAAGGGTTaGGGGCTGGTTCTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYASSVKG*GLVLLW
Trigger: CCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTGGCAAGTCTTTGATTTaGATACTGAACTCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFGKSLI*ILNSSH
Trigger: GTGGCTTGAGTTCAGTATCAAAATCAAAGACTTGCC...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTGCTTGCGAAGCTGGTaGGGCATTTCTGCTCGAACC +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYACLRSW*GISART
Trigger: GGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTATCGCCTCCAATTGCTaGCGAAGCTGGTTGGGCATT +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFIASNC*RSWLGI
Trigger: AATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGAT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTATCGCCTCCAATTGCTaGCGAAGCTGGTTGGGCATT +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCIASNC*RSWLGI
Trigger: AATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGAT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTATGATCGCCTCCAATaGCTTGCGAAGCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAYDRLQ*LAKLVG
Trigger: CCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTGCCAGAGCAATTCTTaGTCCTCTGCTGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCCQSNS*SSAVRG
Trigger: CCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTGCCAGAGCAATTCTTaGTCCTCTGCTGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNACQSNS*SSAVRG
Trigger: CCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTTCGGTGATCATAATATaGTCATTGTGTCTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFSVIII*SLCLSP
Trigger: AGGCGACAGACACAATGACAATATTATGATCACCGA...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTCTCTTGTGGACAGAGTaGACACAAAAAGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFLLWTE*TQKVSS
Trigger: AGATGAGACTTTTTGTGTCAACTCTGTCCACAAGAG...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGTGGGAGCATCGCAATaGATGAAAAAGGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAVGASQ*MKKGGR
Trigger: CCTGCCTCCCTTTTTCATCAATTGCGATGCTCCCAC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS GCA 90 bp AGCTTAGGATATGCTTTTGGGTGCTTAAGGCTTTCGTATCTAAAATaGCAGAGCAATTCTTTGTCCTCTGCTGTGAGAGGGTTAAGTGGA +
Preference number: 5 (lower is better)
Translates to: SLGYAFGCLRLSYLK*QSNSLSSAVRGLSG
Trigger: TCCACTTAACCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCATTTTAGATACGAAAGCCTTAAGCACCCAAAAGCATATCCTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 90 bp CCAGTTTCTGAACTGCAATGGCTCTTACATTTTCATCTGAGAAGTTaGAGTCCAGGAGCTGCATTGTTAACCCAACATCCAAAGCACTTT +
Preference number: 5 (lower is better)
Translates to: PVSELQWLLHFHLRS*SPGAALLTQHPKHF
Trigger: AAAGTGCTTTGGATGTTGGGTTAACAATGCAGCTCCTGGACTGCAACTTCTCAGATGAAAATGTAAGAGCCATTGCAGTTCAGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp AGTGACCAATTCTTTTGTTTCTTAAACCACGCTTCAGCAGAAATCTaGCAAGGGCGCTATCATGGTATGGTTCAAATTTCACAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SDQFFCFLNHASAEI*QGRYHGMVQISQPG
Trigger: TCCAGGCTGTGAAATTTGAACCATACCATGATAGCGCCCTTGCCAGATTTCTGCTGAAGCGTGGTTTAAGAAACAAAAGAATTGGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCATCGTCGTGCACGTaGCTGACGTCAGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSSSCT*LTSVTS
Trigger: TGACGTCACTGACGTCAGCAACGTGCACGACGATGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATTCTTCTTGGCCATCTaGGTGAAGAAGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPFFLAI*VKKLCR
Trigger: CCTGCAGAGCTTCTTCACCAAGATGGCCAAGAAGAA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTTGGCAAAGGACTTGTaGCCCATGCTGGATGTTTGC +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNALAKDL*PMLDVC
Trigger: GCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTCCTCTGTGAAGGGTTaGGGGCTGGTTCTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNISSVKG*GLVLLW
Trigger: CCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGCATTGAAGCTTCCTaGGTCTTCTCCCTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNASIEAS*VFSLPR
Trigger: TCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTTGCTTGCGAAGCTGGTaGGGCATTTCTGCTCGAACC +
Preference number: 5 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNICLRSW*GISART
Trigger: GGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCA...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCATCGCCTCCAATTGCTaGCGAAGCTGGTTGGGCATT +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCIASNC*RSWLGI
Trigger: AATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGAT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTATGATCGCCTCCAATaGCTTGCGAAGCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAYDRLQ*LAKLVG
Trigger: CCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTGCCAGAGCAATTCTTaGTCCTCTGCTGTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCCQSNS*SSAVRG
Trigger: CCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp AGTGACCAATTCTTTTGTTTCTTAAACCACGCTTCAGCAGAAATCTaGCAAGGGCGCTATCATGGTATGGTTCAAATTTCACAGCCTGAT +
Preference number: 5 (lower is better)
Translates to: SDQFFCFLNHASAEI*QGRYHGMVQISQPD
Trigger: ATCAGGCTGTGAAATTTGAACCATACCATGATAGCGCCCTTGCCAGATTTCTGCTGAAGCGTGGTTTAAGAAACAAAAGAATTGGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473541.5
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCAATGCCTCTGATCTaGACCCTGAACTTGCGGTCG +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSMPLI*TLNLRS
Trigger: CGACCGCAAGTTCAGGGTCAAGATCAGAGGCATTGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTTGGCAAAGGACTTGTaGCCCATGCTGGATGTTTGC +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALAKDL*PMLDVC
Trigger: GCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGTTGCAGACGTGAGTTaGTCAGCATTGAAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCVADVS*SALKLP
Trigger: AGGAAGCTTCAATGCTGACAAACTCACGTCTGCAAC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTGACATTGAGTTCTCCTaGTCTGGGTTAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFDIEFS*SGLVAD
Trigger: GTCTGCAACTAACCCAGACAAGGAGAACTCAATGTC...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTGAATGGAGATGGACATaGAGTTCTCCTTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCEWRWT*SSPCLG
Trigger: ACCCAGACAAGGAGAACTCAATGTCCATCTCCATTC...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATAGAGCTGTGGGTAGTTCCCAGTAGCAGGATGATTCTAGTTCTAGAACATTTTCCTTCTGGCCAACAATaGGTATGTTTTGGCCACAAT +
Preference number: 5 (lower is better)
Translates to: IELWVVPSSRMILVLEHFPSGQQ*VCFGHN
Trigger: ATTGTGGCCAAAACATACCAATTGTTGGCCAGAAGG...AAAATGTTCTAGAACTAGAATCATCCTGCTACTGGGAACTACCCACAGCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAGTCCAGGAGCTGCATaGTTAACCCAACATCCAAAG +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPSPGAA*LTQHPK
Trigger: CTTTGGATGTTGGGTTAACAATGCAGCTCCTGGACT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAGTCCAGGAGCTGCATaGTTAACCCAACATCCAAAG +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSPGAA*LTQHPK
Trigger: CTTTGGATGTTGGGTTAACAATGCAGCTCCTGGACT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGAAGTCCAGGAGCTGCATaGTTAACCCAACATCCAAAG +
Preference number: 5 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGSPGAA*LTQHPK
Trigger: CTTTGGATGTTGGGTTAACAATGCAGCTCCTGGACT...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATTCATAACCCTGGAACAAGACCAGCAGAGGAAGGTCAAGGCACAACGGTTTTCGATCATTCCTATTTaGTCACCAGTTGAAATGCAA +
Preference number: 5 (lower is better)
Translates to: IFITLEQDQQRKVKAQRFSIIPI*SPVEMQ
Trigger: TTGCATTTCAACTGGTGACAAAATAGGAATGATCGA...AAACCGTTGTGCCTTGACCTTCCTCTGCTGGTCTTGTTCCAGGGTTATGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp TGCAGTCCTGTGGGGCTAGGTCTACAACATCTGCTTAGGTTTATTTTAGTGGACATCATAATATTGTCATaGTGTCTGTCGCCTATTCCA +
Preference number: 5 (lower is better)
Translates to: CSPVGLGLQHLLRFILVDIIILS*CLSPIP
Trigger: TGGAATAGGCGACAGACACAATGACAATATTATGAT...GTCCACTAAAATAAACCTAAGCAGATGTTGTAGACCTAGCCCCACAGGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTCTGGAAGTGTGGGCTaGTCTTCTTTCCAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCSGSVG*SSFQKF
Trigger: GAACTTCTGGAAAGAAGACAAGCCCACACTTCCAGA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGATCTGGAAGTGTGGGCTaGTCTTCTTTCCAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGSGSVG*SSFQKF
Trigger: GAACTTCTGGAAAGAAGACAAGCCCACACTTCCAGA...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATGCACAGTCCATCCTTaGTCTCTGCAAACTTCGATC +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPCTVHP*SLQTSI
Trigger: GATCGAAGTTTGCAGAGACAAAGGATGGACTGTGCA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGCACCTGCAAAACTATaGCCGGAACGTTGTAGATAT +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPAPAKL*PERCRY
Trigger: ATATCTACAACGTTCCGGCAATAGTTTTGCAGGTGC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAATGAAGATGCAGTTGTaGGCAATCTTCTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPMKMQL*AIFFHR
Trigger: CCTGTGGAAGAAGATTGCCAACAACTGCATCTTCAT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTATGAAGATGCAGTTGTaGGCAATCTTCTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFMKMQL*AIFFHR
Trigger: CCTGTGGAAGAAGATTGCCAACAACTGCATCTTCAT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACGATGAAGATGCAGTaGTTGGCAATCTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNATMKMQ*LAIFFH
Trigger: GTGGAAGAAGATTGCCAACAACTGCATCTTCATCGT...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATTCTTCTTGGCCATCTaGGTGAAGAAGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPFFLAI*VKKLCR
Trigger: CCTGCAGAGCTTCTTCACCAAGATGGCCAAGAAGAA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATTCAGTAGAGCCCCTTaGGGCAAGTCTTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPFSRAP*GKSLIL
Trigger: CAAAATCAAAGACTTGCCCAAAGGGGCTCTACTGAA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGAGCATTGAAGCTTCCTaGGTCTTCTCCCTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWSIEAS*VFSLPR
Trigger: TCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGAATGGAGATGGACATaGAGTTCTCCTTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAEWRWT*SSPCLG
Trigger: ACCCAGACAAGGAGAACTCAATGTCCATCTCCATTC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTAACATCCAAAGCACTTaGATCCCAGACTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFNIQST*IPDFPS
Trigger: AGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGTT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGAAACATCCAAAGCACTTaGATCCCAGACTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGNIQST*IPDFPS
Trigger: AGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGTT...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTTTTCATCTGAGAAGTaGCAGTCCAGGAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAFSSEK*QSRSCI
Trigger: AATGCAGCTCCTGGACTGCAACTTCTCAGATGAAAA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGATTACTTGGACTTGTaGGGTAAAGTCGTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPDYLDL*GKVVQH
Trigger: ATGCTGCACGACTTTACCCAACAAGTCCAAGTAATC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCTCGATTACTTGGACTaGTTGGGTAAAGTCGTGCAG +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALDYLD*LGKVVQ
Trigger: CTGCACGACTTTACCCAACAAGTCCAAGTAATCGAG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGTTGCCCACTGTGCTTaGCTGAATTTTGGCAATTGT +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPVAHCA*LNFGNC
Trigger: ACAATTGCCAAAATTCAGCAAAGCACAGTGGGCAAC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 90 bp TTCATGGTTGAGGCTATGAAGCTTTCCCCTTTTATGAGAAGATGTTaGAAACACTGTAAGTACAGTAATCTTGAAGCATGCACTTGTAGG +
Preference number: 5 (lower is better)
Translates to: FMVEAMKLSPFMRRC*KHCKYSNLEACTCR
Trigger: CCTACAAGTGCATGCTTCAAGATTACTGTACTTACAGTGTTTCCAACATCTTCTCATAAAAGGGGAAAGCTTCATAGCCTCAACCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCATGAAGATGCAGTTGTaGGCAATCTTCTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCMKMQL*AIFFHR
Trigger: CCTGTGGAAGAAGATTGCCAACAACTGCATCTTCAT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTACGATGAAGATGCAGTaGTTGGCAATCTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYATMKMQ*LAIFFH
Trigger: GTGGAAGAAGATTGCCAACAACTGCATCTTCATCGT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAAAAATCCTGTTCGCTTaGGCTTTCGGGAATATCCAT +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPKILFA*AFGNIH
Trigger: ATGGATATTCCCGAAAGCCAAAGCGAACAGGATTTT...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTAAAATCCTGTTCGCTTaGGCTTTCGGGAATATCCAT +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCKILFA*AFGNIH
Trigger: ATGGATATTCCCGAAAGCCAAAGCGAACAGGATTTT...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCAGGCAAGTCTTTGATTTaGATACTGAACTCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPGKSLI*ILNSSH
Trigger: GTGGCTTGAGTTCAGTATCAAAATCAAAGACTTGCC...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTTCAGTAGAGCCCCTTaGGGCAAGTCTTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCFSRAP*GKSLIL
Trigger: CAAAATCAAAGACTTGCCCAAAGGGGCTCTACTGAA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCGTGAGTTTGTCAGCATaGAAGCTTCCTTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCVSLSA*KLPWSS
Trigger: AGAAGACCAAGGAAGCTTCAATGCTGACAAACTCAC...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGGTTGCAGACGTGAGTTaGTCAGCATTGAAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWVADVS*SALKLP
Trigger: AGGAAGCTTCAATGCTGACAAACTCACGTCTGCAAC...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGACATTGAGTTCTCCTaGTCTGGGTTAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPDIEFS*SGLVAD
Trigger: GTCTGCAACTAACCCAGACAAGGAGAACTCAATGTC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTGAATGGAGATGGACATaGAGTTCTCCTTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNIEWRWT*SSPCLG
Trigger: ACCCAGACAAGGAGAACTCAATGTCCATCTCCATTC...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCCCTTCTGGCCAACAATaGGTATGTTTTGGCCACAAT +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCPSGQQ*VCFGHN
Trigger: ATTGTGGCCAAAACATACCAATTGTTGGCCAGAAGG...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAACATCCAAAGCACTTaGATCCCAGACTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCNIQST*IPDFPS
Trigger: AGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGTT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTTTTTCATCTGAGAAGTaGCAGTCCAGGAGCTGCATT +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAFSSEK*QSRSCI
Trigger: AATGCAGCTCCTGGACTGCAACTTCTCAGATGAAAA...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTGATTACTTGGACTTGTaGGGTAAAGTCGTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYADYLDL*GKVVQH
Trigger: ATGCTGCACGACTTTACCCAACAAGTCCAAGTAATC...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCTCGATTACTTGGACTaGTTGGGTAAAGTCGTGCAG +
Preference number: 5 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNILDYLD*LGKVVQ
Trigger: CTGCACGACTTTACCCAACAAGTCCAAGTAATCGAG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGCTCGATTACTTGGACTaGTTGGGTAAAGTCGTGCAG +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWLDYLD*LGKVVQ
Trigger: CTGCACGACTTTACCCAACAAGTCCAAGTAATCGAG...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACTTTACATTTTTCAATaGCCAGCGCTCCTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPLYIFQ*PALLLS
Trigger: TGAAAGCAGGAGCGCTGGCAATTGAAAAATGTAAAG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCTGGAAGTGTGGGCTaGTCTTCTTTCCAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSGSVG*SSFQKF
Trigger: GAACTTCTGGAAAGAAGACAAGCCCACACTTCCAGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGTGCACAGTCCATCCTTaGTCTCTGCAAACTTCGATC +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWCTVHP*SLQTSI
Trigger: GATCGAAGTTTGCAGAGACAAAGGATGGACTGTGCA...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATGCACAGTCCATCCTTaGTCTCTGCAAACTTCGATC +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPCTVHP*SLQTSI
Trigger: GATCGAAGTTTGCAGAGACAAAGGATGGACTGTGCA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCTCTTGTGGACAGAGTaGACACAAAAAGTCTCATCT +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNALLWTE*TQKVSS
Trigger: AGATGAGACTTTTTGTGTCAACTCTGTCCACAAGAG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCACTAGATAACTCACTCTaGTGGACAGAGTTGACACAA +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPLDNSL*WTELTQ
Trigger: TTGTGTCAACTCTGTCCACAAGAGTGAGTTATCTAG...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAACGATGAAGATGCAGTaGTTGGCAATCTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPTMKMQ*LAIFFH
Trigger: GTGGAAGAAGATTGCCAACAACTGCATCTTCATCGT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCAAAATCCTGTTCGCTTaGGCTTTCGGGAATATCCAT +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCKILFA*AFGNIH
Trigger: ATGGATATTCCCGAAAGCCAAAGCGAACAGGATTTT...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGTGAGTTTGTCAGCATaGAAGCTTCCTTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPVSLSA*KLPWSS
Trigger: AGAAGACCAAGGAAGCTTCAATGCTGACAAACTCAC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCACCTTCTGGCCAACAATaGGTATGTTTTGGCCACAAT +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPPSGQQ*VCFGHN
Trigger: ATTGTGGCCAAAACATACCAATTGTTGGCCAGAAGG...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGGATTACTTGGACTTGTaGGGTAAAGTCGTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWDYLDL*GKVVQH
Trigger: ATGCTGCACGACTTTACCCAACAAGTCCAAGTAATC...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAAAGCTTTCGGGGAGTaGAGAATTCTGCAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPKAFGE*RILQVF
Trigger: GAAAACCTGCAGAATTCTCAACTCCCCGAAAGCTTT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCCTATTTTGTCACCAGTaGAAATGCAACCATATGGCA +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNALFCHQ*KCNHMA
Trigger: TGCCATATGGTTGCATTTCAACTGGTGACAAAATAG...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGTTGCCCACTGTGCTTaGCTGAATTTTGGCAATTGT +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPVAHCA*LNFGNC
Trigger: ACAATTGCCAAAATTCAGCAAAGCACAGTGGGCAAC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTCGGTGATCATAATATaGTCATTGTGTCTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCSVIII*SLCLSP
Trigger: AGGCGACAGACACAATGACAATATTATGATCACCGA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATGTTTCTCTCCTTGTTaGATGCCAAGAACAAGATGT +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPCFSPC*MPRTRC
Trigger: ACATCTTGTTCTTGGCATCAAACAAGGAGAGAAACA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAGAGTTCAGGTAGGAAAAGAGCTATACTTCTGAAATGCCAGCTTTCACAATGTTGTTTCTCTCCTTGTTaGATGCCAAGAACAAGATGT +
Preference number: 5 (lower is better)
Translates to: KSSGRKRAILLKCQLSQCCFSPC*MPRTRC
Trigger: ACATCTTGTTCTTGGCATCAAACAAGGAGAGAAACA...ACATTGTGAAAGCTGGCATTTCAGAAGTATAGCTCTTTTCCTACCTGAACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAAAGGTATAGAAGTTGTTCGTCATGTAATTCACTGCGAACAGTAAAGGAAGGAAATGCTAGGTCAGATTaGCTCTGGAAACTTACTTTC +
Preference number: 5 (lower is better)
Translates to: QRYRSCSSCNSLRTVKEGNARSD*LWKLTF
Trigger: GAAAGTAAGTTTCCAGAGCAAATCTGACCTAGCATT...TCCTTCCTTTACTGTTCGCAGTGAATTACATGACGAACAACTTCTATACCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp TTTTTAAAAAGTGTCCCTGTTGATTCTTCTTTGCAGCCAGGCTTAGGAACCTTTAACAATTGGTATGTTTaGGCCACAATTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: FLKSVPVDSSLQPGLGTFNNWYV*ATISCC
Trigger: ACAGCAAGAAATTGTGGCCAAAACATACCAATTGTT...AAAGGTTCCTAAGCCTGGCTGCAAAGAAGAATCAACAGGGACACTTTTTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGCTTTACATTTTTCAATaGCCAGCGCTCCTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWLYIFQ*PALLLS
Trigger: TGAAAGCAGGAGCGCTGGCAATTGAAAAATGTAAAG...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTCTATTTTGTCACCAGTaGAAATGCAACCATATGGCA +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYALFCHQ*KCNHMA
Trigger: TGCCATATGGTTGCATTTCAACTGGTGACAAAATAG...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCTATTCAATGTCTTCTTaGCTTGTTAACTGGGGCATT +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAYSMSS*LVNWGI
Trigger: AATGCCCCAGTTAACAAGCAAAGAAGACATTGAATA...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp GGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCATATTCAATGTCTTCTTaGCTTGTTAACTGGGGCATT +
Preference number: 5 (lower is better)
Translates to: GTIRKSLVCLNREYSPMPYSMSS*LVNWGI
Trigger: AATGCCCCAGTTAACAAGCAAAGAAGACATTGAATA...TGGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AAATGCCAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTGTTTCTCTCCTTGTTaGATGCCAAGAACAAGATGT +
Preference number: 5 (lower is better)
Translates to: KCQLSQCLLHLKSKFDDCCFSPC*MPRTRC
Trigger: ACATCTTGTTCTTGGCATCAAACAAGGAGAGAAACA...GCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTGGCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCTAGATAACTCACTCTaGTGGACAGAGTTGACACAA +
Preference number: 5 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNILDNSL*WTELTQ
Trigger: TTGTGTCAACTCTGTCCACAAGAGTGAGTTATCTAG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp AGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATGCCGTACAAGGTCTGAACTaGGCTATTGTTTATCAGAAT +
Preference number: 5 (lower is better)
Translates to: RDNKEVISLFKPRIFSNAVQGLN*AIVYQN
Trigger: ATTCTGATAAACAATAGCCAAGTTCAGACCTTGTAC...GGCATTGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAGTAAGTACAGTAATCTaGAAGCATGCACTTGTAGGA +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPVSTVI*KHALVG
Trigger: TCCTACAAGTGCATGCTTCAAGATTACTGTACTTAC...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTATCATAATATTGTCATaGTGTCTGTCGCCTATTCCA +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYAIIILS*CLSPIP
Trigger: TGGAATAGGCGACAGACACAATGACAATATTATGAT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp CAGCTTTCACAATGTCTATTGCATTTGAAATCCAAGTTCGATGATTGCTATGCTAGAGTAAAGGTGTTCTaGAAGATTTCACAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: QLSQCLLHLKSKFDDCYARVKVF*KISQVC
Trigger: ACAGACTTGTGAAATCTTCAAGAACACCTTTACTCT...AGCATAGCAATCATCGAACTTGGATTTCAAATGCAATAGACATTGTGAAAGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAACAGAAGGAACATTTaGACCCAGGCACTACATTTA +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPNRRNI*TQALHL
Trigger: TAAATGTAGTGCCTGGGTCAAAATGTTCCTTCTGTT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAACAATTGGTATGTTTaGGCCACAATTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPNNWYV*ATISCC
Trigger: ACAGCAAGAAATTGTGGCCAAAACATACCAATTGTT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp AGTTATAGAGTAAAGGTGTTCTTGAAGATTTCACAAGTCTGTAAAGAGTTGTGGAACAATTGGTATGTTTaGGCCACAATTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: SYRVKVFLKISQVCKELWNNWYV*ATISCC
Trigger: ACAGCAAGAAATTGTGGCCAAAACATACCAATTGTT...CCACAACTCTTTACAGACTTGTGAAATCTTCAAGAACACCTTTACTCTATAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCATCGATCATTCCTATTTaGTCACCAGTTGAAATGCAA +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPSIIPI*SPVEMQ
Trigger: TTGCATTTCAACTGGTGACAAAATAGGAATGATCGA...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAATCATAATATTGTCATaGTGTCTGTCGCCTATTCCA +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPIIILS*CLSPIP
Trigger: TGGAATAGGCGACAGACACAATGACAATATTATGAT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS-3UTR CAA 90 bp ATATCAGGGACAATAAGGAAGTCATTAGTCTGTTTAAACCGAGAATATTCTCCAAGAGTAAAGGTGTTCTaGAAGATTTCACAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: ISGTIRKSLVCLNREYSPRVKVF*KISQVC
Trigger: ACAGACTTGTGAAATCTTCAAGAACACCTTTACTCT...TGGAGAATATTCTCGGTTTAAACAGACTAATGACTTCCTTATTGTCCCTGATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359195.3
ENST00000496166.6
CDS-3UTR CAA 90 bp CCTTTAAATGGGAAATGGATAAGGCAAGTAGTGTTCTTCCTAACTTGGAATATTCTGAAATTATGCTCTTaGGAATACGGAAGAATCAAG +
Preference number: 5 (lower is better)
Translates to: PLNGKWIRQVVFFLTWNILKLCS*EYGRIK
Trigger: CTTGATTCTTCCGTATTCCAAAGAGCATAATTTCAG...AATATTCCAAGTTAGGAAGAACACTACTTGCCTTATCCATTTCCCATTTAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496166.6
CDS GCA 72 bp TGCCGCTGGAAGGCTTGGGACTCCTCGGAGGGCGGGTaGCGCTGCACCAGGTGGATCTGGCCCGGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: CRWKAWDSSEGG*RCTRWIWPGLR
Trigger: CCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp TGGAAGGCTTGGGACTCCTCGGAGGGCGGGTGCCGCTaGACCAGGTGGATCTGGCCCGGGCTCCGGTGCGTG +
Preference number: 6 (lower is better)
Translates to: WKAWDSSEGGCR*TRWIWPGLRCV
Trigger: CACGCACCGGAGCCCGGGCCAGATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGAGTCCCAAGCCTTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp GCCGCCACGCTGGTCTCCAGCGCTCGCAGCCACACCTaGGCCTTCATCTGCTCCACGTTGCCGTGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: AATLVSSARSHT*AFICSTLPWPA
Trigger: GGCCGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGCGCTGGAGACCAGCGTGGCGGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp GCTTGGACGTCACCCACGGGTGCATGGCGTAGAGCTTaGGGTCGCGGCTGGCCACCTCCGCCATGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: AWTSPTGAWRRA*GRGWPPPPCAG
Trigger: CCCCGCGCATGGCGGAGGTGGCCAGCCGCGACCCCAAGCTCTACGCCATGCACCCGTGGGTGACGTCCAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp GCGGTCCCAGCCGGTGGTAGAAGTCCGCCGCCACGCTaGTCTCCAGCGCTCGCAGCCACACCTGGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: AVPAGGRSPPPR*SPALAATPGPS
Trigger: TGAAGGCCCAGGTGTGGCTGCGAGCGCTGGAGACCAGCGTGGCGGCGGACTTCTACCACCGGCTGGGACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp ACTCCGGGAGGGGCTTGGACGTCACCCACGGGTGCATaGCGTAGAGCTTGGGGTCGCGGCTGGCCACCTCCG +
Preference number: 6 (lower is better)
Translates to: TPGGAWTSPTGA*RRAWGRGWPPP
Trigger: CGGAGGTGGCCAGCCGCGACCCCAAGCTCTACGCCATGCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp CTCGCAGCCACACCTGGGCCTTCATCTGCTCCACGTTaGCGTGGCCGGCCACGTGCAGCAGCGCCGTTTCGG +
Preference number: 6 (lower is better)
Translates to: LAATPGPSSAPR*RGRPRAAAPFR
Trigger: CCGAAACGGCGCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp GTCTCCAGCGCTCGCAGCCACACCTGGGCCTTCATCTaGTCCACGTTGCCGTGGCCGGCCACGTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VSSARSHTWAFI*STLPWPATCSS
Trigger: GCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAAGGCCCAGGTGTGGCTGCGAGCGCTGGAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp CCGTGGCCGGCCACGTGCAGCAGCGCCGTTTCGGGGCTCTTGCATTaGCGCTGGCTGGTGGGCAGCACGAACTCGATGGGGATGAGCTCC +
Preference number: 6 (lower is better)
Translates to: PWPATCSSAVSGLLH*RWLVGSTNSMGMSS
Trigger: GGAGCTCATCCCCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGGCCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp GGCCGGCCACGTGCAGCAGCGCCGTTTCGGGGCTCTTaGATTTGCGCTGGCTGGTGGGCAGCACGAACTCGA +
Preference number: 6 (lower is better)
Translates to: GRPRAAAPFRGS*ICAGWWAARTR
Trigger: TCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp TGGCCGGCCACGTGCAGCAGCGCCGTTTCGGGGCTCTaGCATTTGCGCTGGCTGGTGGGCAGCACGAACTCG +
Preference number: 6 (lower is better)
Translates to: WPATCSSAVSGL*HLRWLVGSTNS
Trigger: CGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp ATAGCCAATCAGCGCCGTGAGCTGCCGCTGGAAGGCTaGGGACTCCTCGGAGGGCGGGTGCCGCTGCACCAG +
Preference number: 6 (lower is better)
Translates to: IANQRRELPLEG*GLLGGRVPLHQ
Trigger: CTGGTGCAGCGGCACCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCAGCTCACGGCGCTGATTGGCTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp ACGTTGCCGTGGCCGGCCACGTGCAGCAGCGCCGTTTCGGGGCTCTaGCATTTGCGCTGGCTGGTGGGCAGCACGAACTCGATGGGGATG +
Preference number: 6 (lower is better)
Translates to: TLPWPATCSSAVSGL*HLRWLVGSTNSMGM
Trigger: CATCCCCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGGCCACGGCAACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp GCCTTCATCTGCTCCACGTTGCCGTGGCCGGCCACGTaGAGCAGCGCCGTTTCGGGGCTCTTGCATTTGCGC +
Preference number: 6 (lower is better)
Translates to: AFICSTLPWPAT*SSAVSGLLHLR
Trigger: GCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGCCGGCCACGGCAACGTGGAGCAGATGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp GCCACGTGCAGCAGCGCCGTTTCGGGGCTCTTGCATTaGCGCTGGCTGGTGGGCAGCACGAACTCGATGGGG +
Preference number: 6 (lower is better)
Translates to: ATCSSAVSGLLH*RWLVGSTNSMG
Trigger: CCCCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp AGTGACGTCATAGCCAATCAGCGCCGTGAGCTGCCGCTGGAAGGCTaGGGACTCCTCGGAGGGCGGGTGCCGCTGCACCAGGTGGATCTG +
Preference number: 6 (lower is better)
Translates to: SDVIANQRRELPLEG*GLLGGRVPLHQVDL
Trigger: CAGATCCACCTGGTGCAGCGGCACCCGCCCTCCGAGGAGTCCCAAGCCTTCCAGCGGCAGCTCACGGCGCTGATTGGCTATGACGTCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 72 bp GAAGCTCTGCAGGATGGCGCCGGGGGTGTCGTCGGGTaGGACCTTAATGGTCTGGCTGGTGGTGCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: EALQDGAGGVVG*DLNGLAGGAAV
Trigger: CACCGCAGCACCACCAGCCAGACCATTAAGGTCTCACCCGACGACACCCCCGGCGCCATCCTGCAGAGCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp CCACGTGCAGCAGCGCCGTTTCGGGGCTCTTGCATTTaGGCTGGCTGGTGGGCAGCACGAACTCGATGGGGA +
Preference number: 6 (lower is better)
Translates to: PRAAAPFRGSCI*AGWWAARTRWG
Trigger: TCCCCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCACGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp CGCCTCCAATTGCTTGCGAAGCTGGTTGGGCATTTCTaGTCGAACCCGGTCCCCTTCCGGGTCAGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RLQLLAKLVGHF*SNPVPFRVRGG
Trigger: CCCACCCCTGACCCGGAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp TGCAGCAGCGCCGTTTCGGGGCTCTTGCATTTGCGCTaGCTGGTGGGCAGCACGAACTCGATGGGGATGAGC +
Preference number: 6 (lower is better)
Translates to: CSSAVSGLLHLR*LVGSTNSMGMS
Trigger: GCTCATCCCCATCGAGTTCGTGCTGCCCACCAGCCAGCGCAAATGCAAGAGCCCCGAAACGGCGCTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp TGGCAATCTTCTTCCACAGGTACTCCGGGAGGGGCTTaGACGTCACCCACGGGTGCATGGCGTAGAGCTTGG +
Preference number: 6 (lower is better)
Translates to: WQSSSTGTPGGA*TSPTGAWRRAW
Trigger: CCAAGCTCTACGCCATGCACCCGTGGGTGACGTCCAAGCCCCTCCCGGAGTACCTGTGGAAGAAGATTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 72 bp TCTAGGGCCGGGTCTGGAGGCGTGTCCAGTACCACGTaGATCTCTTCTCCGTTCTTGAGGCAGTGCCTCACC +
Preference number: 6 (lower is better)
Translates to: SRAGSGGVSSTT*ISSPFLRQCLT
Trigger: GGTGAGGCACTGCCTCAAGAACGGAGAAGAGATTCACGTGGTACTGGACACGCCTCCAGACCCGGCCCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp GTGGCTATGATCGCCTCCAATTGCTTGCGAAGCTGGTaGGGCATTTCTGCTCGAACCCGGTCCCCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: VAMIASNCLRSW*GISARTRSPSG
Trigger: CCCGGAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp AGGTCGGTGTTCCGAGGCAGGACGGGGATATCAATGCCTCTGATCTaGACCCTGAACTTGCGGTCGCAGTCCCACAGGGACACGGTGAAC +
Preference number: 6 (lower is better)
Translates to: RSVFRGRTGISMPLI*TLNLRSQSHRDTVN
Trigger: GTTCACCGTGTCCCTGTGGGACTGCGACCGCAAGTTCAGGGTCAAGATCAGAGGCATTGATATCCCCGTCCTGCCTCGGAACACCGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp AGTGGATCAGTGGCTATGATCGCCTCCAATTGCTTGCGAAGCTGGTaGGGCATTTCTGCTCGAACCCGGTCCCCTTCCGGGTCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: SGSVAMIASNCLRSW*GISARTRSPSGSGV
Trigger: CACCCCTGACCCGGAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp CCGTTCTTGAGGCAGTGCCTCACCCACTGGAAGTTTTaGATGGGCGTTTCGCCCACCAGGTACTCATCCCGG +
Preference number: 6 (lower is better)
Translates to: PFLRQCLTHWKF*MGVSPTRYSSR
Trigger: CCGGGATGAGTACCTGGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGGTGAGGCACTGCCTCAAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp TTCCGAGGCAGGACGGGGATATCAATGCCTCTGATCTaGACCCTGAACTTGCGGTCGCAGTCCCACAGGGAC +
Preference number: 6 (lower is better)
Translates to: FRGRTGISMPLI*TLNLRSQSHRD
Trigger: GTCCCTGTGGGACTGCGACCGCAAGTTCAGGGTCAAGATCAGAGGCATTGATATCCCCGTCCTGCCTCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp ATCTCTTCTCCGTTCTTGAGGCAGTGCCTCACCCACTGGAAGTTTTaGATGGGCGTTTCGCCCACCAGGTACTCATCCCGGCCACAGACG +
Preference number: 6 (lower is better)
Translates to: ISSPFLRQCLTHWKF*MGVSPTRYSSRPQT
Trigger: CGTCTGTGGCCGGGATGAGTACCTGGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGGTGAGGCACTGCCTCAAGAACGGAGAAGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp AGAACTGGGGGACTCTGCAGAGGCCTTGCTGGACAGTaGTGGAGCTTTACCGCAGTAGATCTGGAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: RTGGLCRGLAGQ*WSFTAVDLEVQ
Trigger: CTGAACCTCCAGATCTACTGCGGTAAAGCTCCAGCACTGTCCAGCAAGGCCTCTGCAGAGTCCCCCAGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp TCAGTGGCTATGATCGCCTCCAATTGCTTGCGAAGCTaGTTGGGCATTTCTGCTCGAACCCGGTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: SVAMIASNCLRS*LGISARTRSPS
Trigger: GGAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp GTGAGAGGGTTAAGTGGATCAGTGGCTATGATCGCCTCCAATTGCTaGCGAAGCTGGTTGGGCATTTCTGCTCGAACCCGGTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: VRGLSGSVAMIASNC*RSWLGISARTRSPS
Trigger: GGAAGGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAACCCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp TGCTGTGAGAGGGTTAAGTGGATCAGTGGCTATGATCGCCTCCAATaGCTTGCGAAGCTGGTTGGGCATTTCTGCTCGAACCCGGTCCCC +
Preference number: 6 (lower is better)
Translates to: CCERVKWISGYDRLQ*LAKLVGHFCSNPVP
Trigger: GGGGACCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAACCCTCTCACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp CTGAACTCAAGCCACACATTCCACAGCACCTCCTCTGTGAAGGGTTaGGGGCTGGTTCTCCTTTGGCAAAGGACTTGTTGCCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: LNSSHTFHSTSSVKG*GLVLLWQRTCCPCW
Trigger: CCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGAGGTGCTGTGGAATGTGTGGCTTGAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp TTGAAGCTTCCTTGGTCTTCTCCCTTCCCAGATATCTaGCACATGTGGAGGACGTATTCTCCACGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: LKLPWSSPFPDI*HMWRTYSPRRR
Trigger: CCTGCGCCGTGGAGAATACGTCCTCCACATGTGGCAGATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp ATCTCTTCTCCGTTCTTGAGGCAGTGCCTCACCCACTaGAAGTTTTTGATGGGCGTTTCGCCCACCAGGTAC +
Preference number: 6 (lower is better)
Translates to: ISSPFLRQCLTH*KFLMGVSPTRY
Trigger: GTACCTGGTGGGCGAAACGCCCATCAAAAACTTCCAGTGGGTGAGGCACTGCCTCAAGAACGGAGAAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp ACCTCCTCTGTGAAGGGTTTGGGGCTGGTTCTCCTTTaGCAAAGGACTTGTTGCCCATGCTGGATGTTTGCC +
Preference number: 6 (lower is better)
Translates to: TSSVKGLGLVLL*QRTCCPCWMFA
Trigger: GGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp CACCTCCTCTGTGAAGGGTTTGGGGCTGGTTCTCCTTaGGCAAAGGACTTGTTGCCCATGCTGGATGTTTGC +
Preference number: 6 (lower is better)
Translates to: HLLCEGFGAGSP*AKDLLPMLDVC
Trigger: GCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp GGGTTAAGTGGATCAGTGGCTATGATCGCCTCCAATTaGTTGCGAAGCTGGTTGGGCATTTCTGCTCGAACC +
Preference number: 6 (lower is better)
Translates to: GLSGSVAMIASN*LRSWLGISART
Trigger: GGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp TTAAGTGGATCAGTGGCTATGATCGCCTCCAATTGCTaGCGAAGCTGGTTGGGCATTTCTGCTCGAACCCGG +
Preference number: 6 (lower is better)
Translates to: LSGSVAMIASNC*RSWLGISARTR
Trigger: CCGGGTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp CTCTGTGAAGGGTTTGGGGCTGGTTCTCCTTTGGCAAAGGACTTGTaGCCCATGCTGGATGTTTGCCTCTACAAAAACTGTGAGGTCGGT +
Preference number: 6 (lower is better)
Translates to: LCEGFGAGSPLAKDL*PMLDVCLYKNCEVG
Trigger: ACCGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp CTCCTCTGTGAAGGGTTTGGGGCTGGTTCTCCTTTGGCAAAGGACTaGTTGCCCATGCTGGATGTTTGCCTCTACAAAAACTGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: LLCEGFGAGSPLAKD*LPMLDVCLYKNCEV
Trigger: GACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp ATTCCACAGCACCTCCTCTGTGAAGGGTTTGGGGCTGGTTCTCCTTaGGCAAAGGACTTGTTGCCCATGCTGGATGTTTGCCTCTACAAA +
Preference number: 6 (lower is better)
Translates to: IPQHLLCEGFGAGSP*AKDLLPMLDVCLYK
Trigger: TTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCCCAAACCCTTCACAGAGGAGGTGCTGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp CCTTTGGCAAAGGACTTGTTGCCCATGCTGGATGTTTaGCTCTACAAAAACTGTGAGGTCGGTGTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: PLAKDLLPMLDV*LYKNCEVGVPR
Trigger: CCTCGGAACACCGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp GGGCTGGTTCTCCTTTGGCAAAGGACTTGTTGCCCATaGTGGATGTTTGCCTCTACAAAAACTGTGAGGTCG +
Preference number: 6 (lower is better)
Translates to: GLVLLWQRTCCP*WMFASTKTVRS
Trigger: CGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp AGGGTTAAGTGGATCAGTGGCTATGATCGCCTCCAATaGCTTGCGAAGCTGGTTGGGCATTTCTGCTCGAAC +
Preference number: 6 (lower is better)
Translates to: RVKWISGYDRLQ*LAKLVGHFCSN
Trigger: GTTCGAGCAGAAATGCCCAACCAGCTTCGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp GTACTCATCCCGGCCACAGACGCGCAGCACAAAATCCTGTTCGCTTaGGCTTTCGGGAATATCCATCAGAGATTTCTTCTTGGCCATCTT +
Preference number: 6 (lower is better)
Translates to: VLIPATDAQHKILFA*AFGNIHQRFLLGHL
Trigger: AAGATGGCCAAGAAGAAATCTCTGATGGATATTCCCGAAAGCCAAAGCGAACAGGATTTTGTGCTGCGCGTCTGTGGCCGGGATGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp GTCTGGGTTAGTTGCAGACGTGAGTTTGTCAGCATTGAAGCTTCCTaGGTCTTCTCCCTTCCCAGATATCTGCCACATGTGGAGGACGTA +
Preference number: 6 (lower is better)
Translates to: VWVSCRREFVSIEAS*VFSLPRYLPHVEDV
Trigger: TACGTCCTCCACATGTGGCAGATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAACTAACCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 72 bp AGTACAGTAATCTTGAAGCATGCACTTGTAGGAATATaGAGCCTGGCTGCCGTGCCCTCCCTTTTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: STVILKHALVGI*SLAAVPSLFLP
Trigger: TGGGAGGAAAAGGGAGGGCACGGCAGCCAGGCTTCATATTCCTACAAGTGCATGCTTCAAGATTACTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS CCA 72 bp CGGCCACAGACGCGCAGCACAAAATCCTGTTCGCTTTaGCTTTCGGGAATATCCATCAGAGATTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: RPQTRSTKSCSL*LSGISIRDFFL
Trigger: CAAGAAGAAATCTCTGATGGATATTCCCGAAAGCCAAAGCGAACAGGATTTTGTGCTGCGCGTCTGTGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp CTGGTTCTCCTTTGGCAAAGGACTTGTTGCCCATGCTaGATGTTTGCCTCTACAAAAACTGTGAGGTCGGTG +
Preference number: 6 (lower is better)
Translates to: LVLLWQRTCCPC*MFASTKTVRSV
Trigger: CACCGACCTCACAGTTTTTGTAGAGGCAAACATCCAGCATGGGCAACAAGTCCTTTGCCAAAGGAGAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp GTTGCAGACGTGAGTTTGTCAGCATTGAAGCTTCCTTaGTCTTCTCCCTTCCCAGATATCTGCCACATGTGG +
Preference number: 6 (lower is better)
Translates to: VADVSLSALKLP*SSPFPDICHMW
Trigger: CCACATGTGGCAGATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp GAGCAATTCTTTGTCCTCTGCTGTGAGAGGGTTAAGTaGATCAGTGGCTATGATCGCCTCCAATTGCTTGCG +
Preference number: 6 (lower is better)
Translates to: EQFFVLCCERVK*ISGYDRLQLLA
Trigger: CGCAAGCAATTGGAGGCGATCATAGCCACTGATCCACTTAACCCTCTCACAGCAGAGGACAAAGAATTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp GAGTTCTCCTTGTCTGGGTTAGTTGCAGACGTGAGTTTGTCAGCATaGAAGCTTCCTTGGTCTTCTCCCTTCCCAGATATCTGCCACATG +
Preference number: 6 (lower is better)
Translates to: EFSLSGLVADVSLSA*KLPWSSPFPDICHM
Trigger: CATGTGGCAGATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAACTAACCCAGACAAGGAGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 72 bp GGGGCATTCCTGTCATCAGCATCATGGAGAACAGGATaGTCAGTAGGTTTGTGTGATGACGAAGGGCTAGAT +
Preference number: 6 (lower is better)
Translates to: GAFLSSASWRTG*SVGLCDDEGLD
Trigger: ATCTAGCCCTTCGTCATCACACAAACCTACTGATCATCCTGTTCTCCATGATGCTGATGACAGGAATGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp GTGACTTTTTGTAACATCTCGATTACTTGGACTTGTTaGGTAAAGTCGTGCAGCATGGCTGTGCCACAGCCC +
Preference number: 6 (lower is better)
Translates to: VTFCNISITWTC*VKSCSMAVPQP
Trigger: GGGCTGTGGCACAGCCATGCTGCACGACTTTACCCAACAAGTCCAAGTAATCGAGATGTTACAAAAAGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6
CDS CCA 72 bp CTTCAGCAGAAATCTGGCAAGGGCGCTATCATGGTATaGTTCAAATTTCACAGCCTGATAAAGCAGCGGAGG +
Preference number: 6 (lower is better)
Translates to: LQQKSGKGAIMV*FKFHSLIKQRR
Trigger: CCTCCGCTGCTTTATCAGGCTGTGAAATTTGAACCATACCATGATAGCGCCCTTGCCAGATTTCTGCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473541.5
CDS CAA 72 bp AGTTGCAGACGTGAGTTTGTCAGCATTGAAGCTTCCTaGGTCTTCTCCCTTCCCAGATATCTGCCACATGTG +
Preference number: 6 (lower is better)
Translates to: SCRREFVSIEAS*VFSLPRYLPHV
Trigger: CACATGTGGCAGATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp GAGTTCTCCTTGTCTGGGTTAGTTGCAGACGTGAGTTaGTCAGCATTGAAGCTTCCTTGGTCTTCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: EFSLSGLVADVS*SALKLPWSSPF
Trigger: GAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAACTAACCCAGACAAGGAGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp ATGGACATTGAGTTCTCCTTGTCTGGGTTAGTTGCAGACGTGAGTTaGTCAGCATTGAAGCTTCCTTGGTCTTCTCCCTTCCCAGATATC +
Preference number: 6 (lower is better)
Translates to: MDIEFSLSGLVADVS*SALKLPWSSPFPDI
Trigger: GATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAACTAACCCAGACAAGGAGAACTCAATGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 72 bp AGCTCCATGCCCTATGCGACTGGTTTCCTTCATGGTTaGGGCTATGAAGCTTTCCCCTTTTATGAGAAGATG +
Preference number: 6 (lower is better)
Translates to: SSMPYATGFLHG*GYEAFPFYEKM
Trigger: CATCTTCTCATAAAAGGGGAAAGCTTCATAGCCTCAACCATGAAGGAAACCAGTCGCATAGGGCATGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS CCA 72 bp CCCAGACTTCCCTTCTGGCCAACAATTGGTATGTTTTaGCCACAATTTCTTGCTGTCCCCATTTCACTGAAC +
Preference number: 6 (lower is better)
Translates to: PRLPFWPTIGMF*PQFLAVPISLN
Trigger: GTTCAGTGAAATGGGGACAGCAAGAAATTGTGGCCAAAACATACCAATTGTTGGCCAGAAGGGAAGTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp CTTCCAGAATCACAGCGAACCTCTGCTGATAGTGTCTaGACTGGGCTATCTCACTTCTCAAGAACCAAAACA +
Preference number: 6 (lower is better)
Translates to: LPESQRTSADSV*TGLSHFSRTKT
Trigger: TGTTTTGGTTCTTGAGAAGTGAGATAGCCCAGTCCAGACACTATCAGCAGAGGTTCGCTGTGATTCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6
CDS CCA 72 bp AATTGCCAGCGCTCCTGCTTTCAGTCCAGGATCATATaGAACTCTAAAGCTTTCGGGGAGTTGAGAATTCTG +
Preference number: 6 (lower is better)
Translates to: NCQRSCFQSRII*NSKAFGELRIL
Trigger: CAGAATTCTCAACTCCCCGAAAGCTTTAGAGTTCCATATGATCCTGGACTGAAAGCAGGAGCGCTGGCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6
CDS CAA 72 bp TTGTCTGGGTTAGTTGCAGACGTGAGTTTGTCAGCATaGAAGCTTCCTTGGTCTTCTCCCTTCCCAGATATC +
Preference number: 6 (lower is better)
Translates to: LSGLVADVSLSA*KLPWSSPFPDI
Trigger: GATATCTGGGAAGGGAGAAGACCAAGGAAGCTTCAATGCTGACAAACTCACGTCTGCAACTAACCCAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp TGGCTCTTACATTTTCATCTGAGAAGTTGCAGTCCAGGAGCTGCATaGTTAACCCAACATCCAAAGCACTTTGATCCCAGACTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: WLLHFHLRSCSPGAA*LTQHPKHFDPRLPF
Trigger: GAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGTTGGGTTAACAATGCAGCTCCTGGACTGCAACTTCTCAGATGAAAATGTAAGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 72 bp AGGAGCTGCATTGTTAACCCAACATCCAAAGCACTTTaGTCCCAGACTTCCCTTCTGGCCAACAATTGGTAT +
Preference number: 6 (lower is better)
Translates to: RSCIVNPTSKAL*SQTSLLANNWY
Trigger: ATACCAATTGTTGGCCAGAAGGGAAGTCTGGGATCAAAGTGCTTTGGATGTTGGGTTAACAATGCAGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp ATCTGGAGGTTCAGTAGAGCCCCTTTGGGCAAGTCTTaGATTTTGATACTGAACTCAAGCCACACATTCCAC +
Preference number: 6 (lower is better)
Translates to: IWRFSRAPLGKS*ILILNSSHTFH
Trigger: GTGGAATGTGTGGCTTGAGTTCAGTATCAAAATCAAAGACTTGCCCAAAGGGGCTCTACTGAACCTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp TTGTCCAGAAGAATGGAGATGGACATTGAGTTCTCCTaGTCTGGGTTAGTTGCAGACGTGAGTTTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: LSRRMEMDIEFS*SGLVADVSLSA
Trigger: TGCTGACAAACTCACGTCTGCAACTAACCCAGACAAGGAGAACTCAATGTCCATCTCCATTCTTCTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp TCCCAGACTTCCCTTCTGGCCAACAATTGGTATGTTTaGGCCACAATTTCTTGCTGTCCCCATTTCACTGAA +
Preference number: 6 (lower is better)
Translates to: SQTSLLANNWYV*ATISCCPHFTE
Trigger: TTCAGTGAAATGGGGACAGCAAGAAATTGTGGCCAAAACATACCAATTGTTGGCCAGAAGGGAAGTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp ACTGTGAGGGCATCCCGGATATATTCAATGTCTTCTTaGCTTGTTAACTGGGGCATTCCTGTCATCAGCATC +
Preference number: 6 (lower is better)
Translates to: TVRASRIYSMSS*LVNWGIPVISI
Trigger: GATGCTGATGACAGGAATGCCCCAGTTAACAAGCAAAGAAGACATTGAATATATCCGGGATGCCCTCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 90 bp TTTGGGTGCTTAAGGCTTTCGTATCTAAAATGCCAGAGCAATTCTTaGTCCTCTGCTGTGAGAGGGTTAAGTGGATCAGTGGCTATGATC +
Preference number: 6 (lower is better)
Translates to: FGCLRLSYLKCQSNS*SSAVRGLSGSVAMI
Trigger: GATCATAGCCACTGATCCACTTAACCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCATTTTAGATACGAAAGCCTTAAGCACCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS TCA 72 bp TGCAGAACATCATCGTCCTCCAAGCTCTCCAGTTTCTaGACTGCAATGGCTCTTACATTTTCATCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: CRTSSSSKLSSF*TAMALTFSSEK
Trigger: CTTCTCAGATGAAAATGTAAGAGCCATTGCAGTTCAGAAACTGGAGAGCTTGGAGGACGATGATGTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp TATGCTTTTGGGTGCTTAAGGCTTTCGTATCTAAAATaGCAGAGCAATTCTTTGTCCTCTGCTGTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: YAFGCLRLSYLK*QSNSLSSAVRG
Trigger: CCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCATTTTAGATACGAAAGCCTTAAGCACCCAAAAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp CATTTTCATCTGAGAAGTTGCAGTCCAGGAGCTGCATaGTTAACCCAACATCCAAAGCACTTTGATCCCAGA +
Preference number: 6 (lower is better)
Translates to: HFHLRSCSPGAA*LTQHPKHFDPR
Trigger: TCTGGGATCAAAGTGCTTTGGATGTTGGGTTAACAATGCAGCTCCTGGACTGCAACTTCTCAGATGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp TTCGTATCTAAAATGCCAGAGCAATTCTTTGTCCTCTaGTGTGAGAGGGTTAAGTGGATCAGTGGCTATGAT +
Preference number: 6 (lower is better)
Translates to: FVSKMPEQFFVL*CERVKWISGYD
Trigger: ATCATAGCCACTGATCCACTTAACCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCATTTTAGATACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS GCA 72 bp GGCCATTACTTTACATTTTTCAATTGCCAGCGCTCCTaGTTTCAGTCCAGGATCATATGGAACTCTAAAGCT +
Preference number: 6 (lower is better)
Translates to: GHYFTFFNCQRS*FQSRIIWNSKA
Trigger: AGCTTTAGAGTTCCATATGATCCTGGACTGAAAGCAGGAGCGCTGGCAATTGAAAAATGTAAAGTAATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6
CDS CAA 72 bp TTAAGGCTTTCGTATCTAAAATGCCAGAGCAATTCTTaGTCCTCTGCTGTGAGAGGGTTAAGTGGATCAGTG +
Preference number: 6 (lower is better)
Translates to: LRLSYLKCQSNS*SSAVRGLSGSV
Trigger: CACTGATCCACTTAACCCTCTCACAGCAGAGGACAAAGAATTGCTCTGGCATTTTAGATACGAAAGCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CAA 72 bp CTTTCACAATCTCGATCATTCCTATTTTGTCACCAGTaGAAATGCAACCATATGGCAGGAGGCATAGATCCA +
Preference number: 6 (lower is better)
Translates to: LSQSRSFLFCHQ*KCNHMAGGIDP
Trigger: TGGATCTATGCCTCCTGCCATATGGTTGCATTTCAACTGGTGACAAAATAGGAATGATCGAGATTGTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6
CDS CCA 72 bp GAGGCTATGAAGCTTTCCCCTTTTATGAGAAGATGTTaGAAACACTGTAAGTACAGTAATCTTGAAGCATGC +
Preference number: 6 (lower is better)
Translates to: EAMKLSPFMRRC*KHCKYSNLEAC
Trigger: GCATGCTTCAAGATTACTGTACTTACAGTGTTTCCAACATCTTCTCATAAAAGGGGAAAGCTTCATAGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359195.3
CDS GCA 72 bp TTCACTGAACTAAATAGCTTAGGATATGCTTTTGGGTaGTTAAGGCTTTCGTATCTAAAATGCCAGAGCAAT +
Preference number: 6 (lower is better)
Translates to: FTELNSLGYAFG*LRLSYLKCQSN
Trigger: ATTGCTCTGGCATTTTAGATACGAAAGCCTTAAGCACCCAAAAGCATATCCTAAGCTATTTAGTTCAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000496166.6
CDS CCA 72 bp TCCATGATTCGTAGAATCTGTAAAATAAGCATGTCTTaGCGCAGATCATCACCATGTTTAAAGATAATTCCA +
Preference number: 6 (lower is better)
Translates to: SMIRRICKISMS*RRSSPCLKIIP
Trigger: TGGAATTATCTTTAAACATGGTGATGATCTGCGCCAAGACATGCTTATTTTACAGATTCTACGAATCATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359195.3
ENST00000440650.6
ENST00000473541.5
ENST00000496166.6