RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3CB (Homo sapiens)

Ensembl gene IDs: ENSG00000051382

Ensembl transcript IDs: ENST00000289153.6, ENST00000462898.5, ENST00000465581.1, ENST00000469284.6, ENST00000473435.1, ENST00000477593.5, ENST00000483968.5, ENST00000487552.1, ENST00000493568.5, ENST00000544716.5, ENST00000674063.1

Found 749 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTACCTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATaGCTGATGAGGCTGGGAAACAAGGGGAGAAGTCAGGGAAGAGGC +
Preference number: 1 (lower is better)
Translates to: PYLRLPPKSRGPPIP*LMRLGNKGRSQGRG
Trigger: GCCTCTTCCCTGACTTCTCCCCTTGTTTCCCAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAGGTAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR GCA 90 bp GGCTCAGTGCCAAGTAACTACCCAGACTTCAGGACACCTCCCATATaGATGGCTCCTTACCTCAGGCTCCCACCAAAGTCCAGGGGGCCT +
Preference number: 1 (lower is better)
Translates to: GSVPSNYPDFRTPPI*MAPYLRLPPKSRGP
Trigger: AGGCCCCCTGGACTTTGGTGGGAGCCTGAGGTAAGGAGCCATGCATATGGGAGGTGTCCTGAAGTCTGGGTAGTTACTTGGCACTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CCA 90 bp CAGTGCCAAGTAACTACCCAGACTTCAGGACACCTCCCATATGCATaGCTCCTTACCTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTA +
Preference number: 1 (lower is better)
Translates to: QCQVTTQTSGHLPYA*LLTSGSHQSPGGLL
Trigger: TAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAGGTAAGGAGCCATGCATATGGGAGGTGTCCTGAAGTCTGGGTAGTTACTTGGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CCA 90 bp TTGGCTGAGGAGACCCCTCTGGAAAGAATGGTATCCATTTCTTCCTaGCAGTGTTCACCATTCTCCAAACCACTGACCTGCGGCCTGGTT +
Preference number: 1 (lower is better)
Translates to: LAEETPLERMVSISS*QCSPFSKPLTCGLV
Trigger: AACCAGGCCGCAGGTCAGTGGTTTGGAGAATGGTGAACACTGCCAGGAAGAAATGGATACCATTCTTTCCAGAGGGGTCTCCTCAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 90 bp GCACTTTCATGTGCCCCACACTTCCCCGGCAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGACAGCAGGAATGTGCACTTCTGACC +
Preference number: 1 (lower is better)
Translates to: ALSCAPHFPGSMLQG*HQIVLRQQECALLT
Trigger: GGTCAGAAGTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGTGTGGGGCACATGAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR TCA 90 bp TGGTATCCATTTCTTCCTGGCAGTGTTCACCATTCTCCAAACCACTaGCCTGCGGCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAA +
Preference number: 1 (lower is better)
Translates to: WYPFLPGSVHHSPNH*PAAWFMKWWVATRQ
Trigger: TTGTCTAGTAGCCACCCACCATTTCATGAACCAGGCCGCAGGTCAGTGGTTTGGAGAATGGTGAACACTGCCAGGAAGAAATGGATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CCA 90 bp CAGAGAGGGCTTCCCGGTAAGCACTCTGTTTTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTCTGTTTAACTTCACGGCATTCAGTT +
Preference number: 1 (lower is better)
Translates to: QRGLPGKHSVLNRYA*PPSLWLCLTSRHSV
Trigger: AACTGAATGCCGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACAGAGTGCTTACCGGGAAGCCCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 90 bp GGCATGTATTTATCAAGGCCCTCCTTTTGGCTGAGGAGACCCCTCTaGAAAGAATGGTATCCATTTCTTCCTGGCAGTGTTCACCATTCT +
Preference number: 1 (lower is better)
Translates to: GMYLSRPSFWLRRPL*KEWYPFLPGSVHHS
Trigger: AGAATGGTGAACACTGCCAGGAAGAAATGGATACCATTCTTTCCAGAGGGGTCTCCTCAGCCAAAAGGAGGGCCTTGATAAATACATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 90 bp TCAGCTGAATGTCAGCAATTGTTTCAGAGGTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTGTTGCTAAACAGCCATAAGGCAACA +
Preference number: 1 (lower is better)
Translates to: SAECQQLFQRCSQLQ*GQSDLLLLNSHKAT
Trigger: TGTTGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCACCTCTGAAACAATTGCTGACATTCAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR TCA 90 bp AACTTCACTGATTTGGCATGTATTTATCAAGGCCCTCCTTTTGGCTaGGGAGACCCCTCTGGAAAGAATGGTATCCATTTCTTCCTGGCA +
Preference number: 1 (lower is better)
Translates to: NFTDLACIYQGPPFG*GDPSGKNGIHFFLA
Trigger: TGCCAGGAAGAAATGGATACCATTCTTTCCAGAGGGGTCTCCTCAGCCAAAAGGAGGGCCTTGATAAATACATGCCAAATCAGTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 90 bp GAAGCAGCGCCTGAAGCTGAGCAACATCCTCAAGTTTATTCCACTTaGTTGACAGCAGTAATTTTGGCAGTGATTGTGGGAAAATCTCTC +
Preference number: 1 (lower is better)
Translates to: EAAPEAEQHPQVYST*LTAVILAVIVGKSL
Trigger: GAGAGATTTTCCCACAATCACTGCCAAAATTACTGCTGTCAATCAAGTGGAATAAACTTGAGGATGTTGCTCAGCTTCAGGCGCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 90 bp TTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTaGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACTCAGAG +
Preference number: 1 (lower is better)
Translates to: FSFPYHRGLRAPNIL*RISSSFAGCCQDSE
Trigger: CTCTGAGTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR GCA 90 bp AGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCCCT +
Preference number: 1 (lower is better)
Translates to: SRGNHRGLFRLGSVG*LVLNLTLSSRISFP
Trigger: AGGGAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
3UTR GCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTaGCAGGACTCAGAGAGATCACCCATTTACACATTCAAACCAGTA +
Preference number: 1 (lower is better)
Translates to: APNILWRISSSFAGC*QDSERSPIYTFKPV
Trigger: TACTGGTTTGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR CCA 90 bp TGTTCATACATTTTCTTGATCTTGCAGCATTCCACAAGTATAAAATaGGGCAGGGCTCTGTTCATCACACAGTTCCGGATATACTGGAAC +
Preference number: 1 (lower is better)
Translates to: CSYIFLILQHSTSIK*GRALFITQFRIYWN
Trigger: GTTCCAGTATATCCGGAACTGTGTGATGAACAGAGCCCTGCCCCATTTTATACTTGTGGAATGCTGCAAGATCAAGAAAATGTATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR GCA 90 bp TTCACTTTAGTAGTCCAGCTTTCCCTGAGCGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCTTCTTCTTCACTCTTCCCTAATGCA +
Preference number: 1 (lower is better)
Translates to: FTLVVQLSLSASSNF*LNCLSASSSLFPNA
Trigger: TGCATTAGGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGCTGGACTACTAAAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR GCA 90 bp GTGATGCTGATGCTCCTCATCAGGGGACCACACTTGGAGAATGATTaGTATAGATTAACAACAATGAAACTTACAATAAAGTCACTTACC +
Preference number: 1 (lower is better)
Translates to: VMLMLLIRGPHLEND*YRLTTMKLTIKSLT
Trigger: GGTAAGTGACTTTATTGTAAGTTTCATTGTTGTTAATCTATAGCAATCATTCTCCAAGTGTGGTCCCCTGATGAGGAGCATCAGCATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 90 bp TCTTGTCGCAAAGTCCAAATAAGATCCATTTCATTTTCACACAGTTaGGACAAGGGATCCCTGTCCAAGATTTCTTTCAATACAGGAAGA +
Preference number: 1 (lower is better)
Translates to: SCRKVQIRSISFSHS*DKGSLSKISFNTGR
Trigger: TCTTCCTGTATTGAAAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAAATGGATCTTATTTGGACTTTGCGACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTaGAATCCATGTATTTGCACTTTTCAACATAGAGTTCTGAGAGGA +
Preference number: 1 (lower is better)
Translates to: HQIPCYCIPATKASF*NPCICTFQHRVLRG
Trigger: TCCTCTCAGAACTCTATGTTGAAAAGTGCAAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 90 bp TCCAAACCAGCTTCTTTCCAGAGTAAATCCATCAAGCGCAACATTTaGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTTAAAA +
Preference number: 1 (lower is better)
Translates to: SKPASFQSKSIKRNI*SVNISCRKSSPFLK
Trigger: TTTTAAAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAGAAGCTGGTTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR-3UTR CCA 90 bp GAACTGGACTGCTCCAGCATCTGCCCCATGAACAAGAGCTCCAAAGCAGCAGAGCCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: ELDCSSICPMNKSSKAAEPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...CTCTGCTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGGAGCAGTCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR GCA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGTCCAAGGAACTGGACTaGTCCAGCATCTGCCCCATG +
Preference number: 2 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTSKELD*SSICPM
Trigger: CATGGGGCAGATGCTGGAGCAGTCCAGTTCCTTGGA...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGCCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCAAAGCAGCAGAGTCTaGCCTTGGCTCAGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWQSSRV*PWLSAK
Trigger: CTTGGCACTGAGCCAAGGCCAGACTCTGCTGCTTTG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CAA 90 bp GAAGTCAGGGAAGAGGCCATAATAAGCCTTAGCCTATTCCTGAGGTaGGTTTGTCTACTGACTTGGCCATTTCTTGGAGTTCCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: EVREEAIISLSLFLR*VCLLTWPFLGVPVP
Trigger: TGGCACTGGAACTCCAAGAAATGGCCAAGTCAGTAGACAAACCAACCTCAGGAATAGGCTAAGGCTTATTATGGCCTCTTCCCTGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR TCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCCCAGCATCTGCCCCATaGACAAGAGCTCCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SFPYHRGLRAPNILWRISPASAP*TRAPKQ
Trigger: CTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGG...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR TCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SFPYHRGLRAPNILWRISEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR GCA 90 bp GCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAAAGATCTCTGAACAAACCTTTCTTGGAGTTCCAGTaGCAAGTTCCAAAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AWFMKWWVATRQRSLNKPFLEFQ*QVPKAQ
Trigger: CTGGGCCTTTGGAACTTGGCACTGGAACTCCAAGAA...AGGTTTGTTCAGAGATCTTTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCTGGCCTTGGCTCAGTaGCAAGTAACTACCCAGACT +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWLALAQ*QVTTQT
Trigger: AGTCTGGGTAGTTACTTGGCACTGAGCCAAGGCCAG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp TCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGACCTCTGAGCTTACGATaGTTTTACACAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: SLTDVSSGSPAVNISAKRPLSLR*FYTGAQ
Trigger: CTGAGCTCCTGTGTAAAACCATCGTAAGCTCAGAGG...TCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR-3UTR GCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGAGGACACCTCCCATATaGATGGCTCCTTACCTCAGG +
Preference number: 2 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMRTPPI*MAPYLR
Trigger: CCTGAGGTAAGGAGCCATGCATATGGGAGGTGTCCT...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR GCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGGACACCTCCCATATaGATGGCTCCTTACCTCAGG +
Preference number: 2 (lower is better)
Translates to: SFPYHRGLRAPNILWRISRTPPI*MAPYLR
Trigger: CCTGAGGTAAGGAGCCATGCATATGGGAGGTGTCCT...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGTCCAAACCACTGACCTaGGGCCTGGTTCATGAAATG +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWSKPLT*GLVHEM
Trigger: CATTTCATGAACCAGGCCGCAGGTCAGTGGTTTGGA...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp AGTCCAGCTTTCCCTGAGCGCCTCATCAAATTTTTGCTTAAACTGTTTGAGTGCCCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SPAFPERLIKFLLKLFECPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...GCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGCTGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR TCA 90 bp ACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGAGTGATGCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 2 (lower is better)
Translates to: TDVSSGSPAVNISAKRVMQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...CATCACTCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR TCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCATTCTCCAAACCACTaGCCTGCGGCCTGGTTCATG +
Preference number: 2 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYHSPNH*PAAWFM
Trigger: CATGAACCAGGCCGCAGGTCAGTGGTTTGGAGAATG...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR GCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCGAGTTCAGGAAGCCCTaGAGTCAACATCAGCGCAAA +
Preference number: 2 (lower is better)
Translates to: SFPYHRGLRAPNILWRISEFRKP*SQHQRK
Trigger: TTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTC...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CCA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGGACTTGGCCATTTCTTaGAGTTCCAGTGCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTDLAIS*SSSAKF
Trigger: GAACTTGGCACTGGAACTCCAAGAAATGGCCAAGTC...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACAGCAGCTGGAAGAACTaGATCACACAGTTACCTAAC +
Preference number: 2 (lower is better)
Translates to: APNILWRISSSFAGCCQDSSWKN*ITQLPN
Trigger: GTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCT...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGCAGCTGGAAGAACTaGATCACACAGTTACCTAAC +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWSSWKN*ITQLPN
Trigger: GTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCT...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATAGCAGCTGGAAGAACTaGATCACACAGTTACCTAAC +
Preference number: 2 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHSSWKN*ITQLPN
Trigger: GTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCT...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGCCTGGTTCATGAAATaGTGGGTGGCTACTAGACAA +
Preference number: 2 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMAWFMK*WVATRQ
Trigger: TTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGGTATCCATTTCTTCCTaGCAGTGTTCACCATTCTCC +
Preference number: 2 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTVSISS*QCSPFS
Trigger: GGAGAATGGTGAACACTGCCAGGAAGAAATGGATAC...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGCTAAGTTTTCAGGGATaGATGGTTCATGCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRLSFQG*MVHALV
Trigger: CACCAGAGCATGAACCATCCATCCCTGAAAACTTAG...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR CAA 90 bp GTCCAGCTTTCCCTGAGCGCCTCATCAAATTTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTCTTCCCTAATGCAAGAGAGTCCTTA +
Preference number: 2 (lower is better)
Translates to: VQLSLSASSNFCLNC*SASSSLFPNARESL
Trigger: TAAGGACTCTCTTGCATTAGGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGCTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR TCA 90 bp AGTCCAGCTTTCCCTGAGCGCCTCATCAAATTTTTGCTTAAACTGTTTGAGTGCGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 2 (lower is better)
Translates to: SPAFPERLIKFLLKLFECDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...GCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGCTGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 2 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATCATATCACCGAGGATTaGGAGCTCCCAATATTCTTT +
Preference number: 2 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHHITED*ELPIFF
Trigger: AAAGAATATTGGGAGCTCTCAATCCTCGGTGATATG...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR TCA 90 bp GCAACATCCGAAGATCCAAACCAGCTTCTTTCCAGAGTAAATCCATCAAGCGCAAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 2 (lower is better)
Translates to: ATSEDPNQLLSRVNPSSASMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...TGCGCTTGATGGATTTACTCTGGAAAGAAGCTGGTTTGGATCTTCGGATGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGGTGTGGAAAAGTTGTTaGCTGAGTGACAATACTTGG +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWVWKSC*LSDNTW
Trigger: CCAAGTATTGTCACTCAGCCAACAACTTTTCCACAC...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp ACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGAGTGATGTTAAAGATTTCCGTGTaGCGTGAAACCATTTCAATT +
Preference number: 2 (lower is better)
Translates to: TDVSSGSPAVNISAKRVMLKISV*RETISI
Trigger: AATTGAAATGGTTTCACGCCACACGGAAATCTTTAA...CATCACTCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTATCCATTTCTTCCTaGCAGTGTTCACCATTCTCC +
Preference number: 2 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMVSISS*QCSPFS
Trigger: GGAGAATGGTGAACACTGCCAGGAAGAAATGGATAC...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 2 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGGCAGTTTTCAAAATaGACAGCTACGATGAGCTTT +
Preference number: 2 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHWQFSK*TATMSF
Trigger: AAAGCTCATCGTAGCTGTTCATTTTGAAAACTGCCA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR-3UTR TCA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGAGACCAGCCCTGACATaGACTTTTACAGTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKRPALT*TFTVSS
Trigger: AGAGGAAACTGTAAAAGTTCATGTCAGGGCTGGTCT...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACCTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 2 (lower is better)
Translates to: APNILWRISSSFAGCCQDLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp GCTTTCCCTGAGCGCCTCATCAAATTTTTGCTTAAACTGTTTGAGTGCTTCTTCCATTATAGAAGCAGCTaGAAGAACTGGATCACACAG +
Preference number: 2 (lower is better)
Translates to: AFPERLIKFLLKLFECFFHYRSS*KNWITQ
Trigger: CTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATG...GAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CCA 90 bp GATCCATTTCATTTTCACACAGTTGAGACAAGGGATCCCTGTCCAAGATTTCTTTCCACAAGTATAAAATaGGGCAGGGCTCTGTTCATC +
Preference number: 2 (lower is better)
Translates to: DPFHFHTVETRDPCPRFLSTSIK*GRALFI
Trigger: GATGAACAGAGCCCTGCCCCATTTTATACTTGTGGA...AAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAAATGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR CAA 90 bp AGTCATAGGGCAAATACTCAGTTCTCTTTCCCATATCACCGAGGATaGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: SHRANTQFSFPYHRG*RAPNILWRISSSFA
Trigger: AGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGTATTTGCCCTATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR CAA 90 bp CAGTTCTCTCTGGTGATGCTGATGCTCCTCATCAGGGGACCACACTaGGAGAATGATTGCTATAGATTAACAACAATGAAACTTACAATA +
Preference number: 2 (lower is better)
Translates to: QFSLVMLMLLIRGPH*ENDCYRLTTMKLTI
Trigger: TATTGTAAGTTTCATTGTTGTTAATCTATAGCAATCATTCTCCAAGTGTGGTCCCCTGATGAGGAGCATCAGCATCACCAGAGAGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCATTATGGCAGCCTCTATaGCAATCATTTCTTGTTCAT +
Preference number: 2 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSLWQPL*QSFLVH
Trigger: ATGAACAAGAAATGATTGCCATAGAGGCTGCCATAA...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR CAA 90 bp GATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACT +
Preference number: 2 (lower is better)
Translates to: DKSWKHSKSRGNHRG*FRLGSVGCLVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
3UTR CAA 90 bp GTCTTGTCGCAAAGTCCAAATAAGATCCATTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTCCAAGATTTCTTTCAATACAGGAAG +
Preference number: 2 (lower is better)
Translates to: VLSQSPNKIHFIFTQ*RQGIPVQDFFQYRK
Trigger: CTTCCTGTATTGAAAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAAATGGATCTTATTTGGACTTTGCGACAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR TCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 2 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR TCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 2 (lower is better)
Translates to: YHRGLRAPNILWRISSSFDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR GCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACT +
Preference number: 2 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHLGSVG*LVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR GCA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGAAAGATACAATTTGGTaGCCATATGGGAAAAACAGT +
Preference number: 2 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTKDTIW*PYGKNS
Trigger: ACTGTTTTTCCCATATGGGCACCAAATTGTATCTTT...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR GCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTGTTTTAAACAGGTATaGATGGCCTCCTTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYCFKQV*MASFPL
Trigger: CAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTTAAAGATTTCCGTGTaGCGTGAAACCATTTCAATT +
Preference number: 2 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHLKISV*RETISI
Trigger: AATTGAAATGGTTTCACGCCACACGGAAATCTTTAA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR TCA 90 bp CCTAATGCAAGAGAGTCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 2 (lower is better)
Translates to: PNARESLRYCISLTDVSSKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...TGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGACTCTCTTGCATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR TCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 2 (lower is better)
Translates to: YGTSTNNLKISVWRETISKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR TCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 2 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR TCA 90 bp CCTAATGCAAGAGAGTCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 2 (lower is better)
Translates to: PNARESLRYCISLTDVSSDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...TGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGACTCTCTTGCATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR GCA 90 bp AATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATGGGATGGATGGTTCATaGTCTGGTGGATATGTTTGT +
Preference number: 2 (lower is better)
Translates to: NTLLLYTSHKGFILESMYGMDGS*SGGYVC
Trigger: ACAAACATATCCACCAGAGCATGAACCATCCATCCC...ATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR-3UTR GCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGGCTTGCAATCTCAGCTaGCTTTTCAATAATCTTATC +
Preference number: 2 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMACNLS*LFNNLI
Trigger: GATAAGATTATTGAAAAGGCAGCTGAGATTGCAAGC...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR-3UTR CCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCACATTATAGAAGCAGCTaGAAGAACTGGATCACACAG +
Preference number: 2 (lower is better)
Translates to: YGTSTNNLKISVWRETISHYRSS*KNWITQ
Trigger: CTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATG...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCACTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 2 (lower is better)
Translates to: YGTSTNNLKISVWRETISLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CCA 90 bp AATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 2 (lower is better)
Translates to: NTLLLYTSHKGFILESMYSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...ATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 2 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CAA 90 bp ATAGGGGCTAACTTCATCTTCCTTCCCATGAATAGTCAAACGTTTTaGGATTGCCAATTCATTTACTTTGATAGGATTCATATTAGGAGA +
Preference number: 2 (lower is better)
Translates to: IGANFIFLPMNSQTF*DCQFIYFDRIHIRR
Trigger: TCTCCTAATATGAATCCTATCAAAGTAAATGAATTGGCAATCCAAAAACGTTTGACTATTCATGGGAAGGAAGATGAAGTTAGCCCCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR GCA 72 bp AGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATaGCTGATGAGGCTGGGAAACAAGGGGAGAAGTCAG +
Preference number: 3 (lower is better)
Translates to: RLPPKSRGPPIP*LMRLGNKGRSQ
Trigger: CTGACTTCTCCCCTTGTTTCCCAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CAA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGATTCCTGAGGTTGGTTaGTCTACTGACTTGGCCATT +
Preference number: 3 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLIPEVG*STDLAI
Trigger: AATGGCCAAGTCAGTAGACAAACCAACCTCAGGAAT...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR GCA 72 bp CCAAGTAACTACCCAGACTTCAGGACACCTCCCATATaGATGGCTCCTTACCTCAGGCTCCCACCAAAGTCC +
Preference number: 3 (lower is better)
Translates to: PSNYPDFRTPPI*MAPYLRLPPKS
Trigger: GGACTTTGGTGGGAGCCTGAGGTAAGGAGCCATGCATATGGGAGGTGTCCTGAAGTCTGGGTAGTTACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 72 bp TTTCTTCCTGGCAGTGTTCACCATTCTCCAAACCACTaGCCTGCGGCCTGGTTCATGAAATGGTGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: FLPGSVHHSPNH*PAAWFMKWWVA
Trigger: AGCCACCCACCATTTCATGAACCAGGCCGCAGGTCAGTGGTTTGGAGAATGGTGAACACTGCCAGGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 72 bp TGTGCCCCACACTTCCCCGGCAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGACAGCAGGAATGTGCA +
Preference number: 3 (lower is better)
Translates to: CAPHFPGSMLQG*HQIVLRQQECA
Trigger: TGCACATTCCTGCTGTCTCAGTACAATTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGTGTGGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CAA 90 bp ACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGAGTGATGATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 3 (lower is better)
Translates to: TDVSSGSPAVNISAKRVMMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...CATCACTCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 72 bp CCTGAGGTTGGTTTGTCTACTGACTTGGCCATTTCTTaGAGTTCCAGTGCCAAGTTCCAAAGGCCCAGTCTA +
Preference number: 3 (lower is better)
Translates to: PEVGLSTDLAIS*SSSAKFQRPSL
Trigger: TAGACTGGGCCTTTGGAACTTGGCACTGGAACTCCAAGAAATGGCCAAGTCAGTAGACAAACCAACCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CCA 72 bp GAGACCCCTCTGGAAAGAATGGTATCCATTTCTTCCTaGCAGTGTTCACCATTCTCCAAACCACTGACCTGC +
Preference number: 3 (lower is better)
Translates to: ETPLERMVSISS*QCSPFSKPLTC
Trigger: GCAGGTCAGTGGTTTGGAGAATGGTGAACACTGCCAGGAAGAAATGGATACCATTCTTTCCAGAGGGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CCA 72 bp TTATCAAGGCCCTCCTTTTGGCTGAGGAGACCCCTCTaGAAAGAATGGTATCCATTTCTTCCTGGCAGTGTT +
Preference number: 3 (lower is better)
Translates to: LSRPSFWLRRPL*KEWYPFLPGSV
Trigger: AACACTGCCAGGAAGAAATGGATACCATTCTTTCCAGAGGGGTCTCCTCAGCCAAAAGGAGGGCCTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CCA 72 bp CTTCCCGGTAAGCACTCTGTTTTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTCTGTTTAACTTCACGG +
Preference number: 3 (lower is better)
Translates to: LPGKHSVLNRYA*PPSLWLCLTSR
Trigger: CCGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACAGAGTGCTTACCGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CAA 90 bp ACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGAGTGATGTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 3 (lower is better)
Translates to: TDVSSGSPAVNISAKRVMSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...CATCACTCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR TCA 72 bp TGTCAGCAATTGTTTCAGAGGTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTGTTGCTAAACAGCCAT +
Preference number: 3 (lower is better)
Translates to: CQQLFQRCSQLQ*GQSDLLLLNSH
Trigger: ATGGCTGTTTAGCAACAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCACCTCTGAAACAATTGCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR-3UTR CAA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATGGTTTGTCTACTGACTaGGCCATTTCTTGGAGTTCC +
Preference number: 3 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHGLSTD*AISWSS
Trigger: GGAACTCCAAGAAATGGCCAAGTCAGTAGACAAACC...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 72 bp GATTTGGCATGTATTTATCAAGGCCCTCCTTTTGGCTaGGGAGACCCCTCTGGAAAGAATGGTATCCATTTC +
Preference number: 3 (lower is better)
Translates to: DLACIYQGPPFG*GDPSGKNGIHF
Trigger: GAAATGGATACCATTCTTTCCAGAGGGGTCTCCTCAGCCAAAAGGAGGGCCTTGATAAATACATGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CCA 72 bp CTTAGCCTATTCCTGAGGTTGGTTTGTCTACTGACTTaGCCATTTCTTGGAGTTCCAGTGCCAAGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: LSLFLRLVCLLT*PFLGVPVPSSK
Trigger: TTTGGAACTTGGCACTGGAACTCCAAGAAATGGCCAAGTCAGTAGACAAACCAACCTCAGGAATAGGCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR-3UTR CAA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATCCATATCACCGAGGATaGAGAGCTCCCAATATTCTT +
Preference number: 3 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHPYHRG*RAPNIL
Trigger: AAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CAA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCACATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 3 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR GCA 72 bp AACATCAGCGCAAAGAGAGTGATGAAGAGATTCCCATaGCGTCGTAAAATCAGATATGCATCCTCACAACAC +
Preference number: 3 (lower is better)
Translates to: NISAKRVMKRFP*RRKIRYASSQH
Trigger: GTGTTGTGAGGATGCATATCTGATTTTACGACGGCATGGGAATCTCTTCATCACTCTCTTTGCGCTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 72 bp CCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTaGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: PYHRGLRAPNIL*RISSSFAGCCQ
Trigger: CTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR-3UTR CAA 90 bp GATCCATTTCATTTTCACACAGTTGAGACAAGGGATCCCTGTCCAAGATTTCTTGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: DPFHFHTVETRDPCPRFLGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...AAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAAATGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR TCA 72 bp CCTGAAGCTGAGCAACATCCTCAAGTTTATTCCACTTaGTTGACAGCAGTAATTTTGGCAGTGATTGTGGGA +
Preference number: 3 (lower is better)
Translates to: PEAEQHPQVYST*LTAVILAVIVG
Trigger: TCCCACAATCACTGCCAAAATTACTGCTGTCAATCAAGTGGAATAAACTTGAGGATGTTGCTCAGCTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR TCA 72 bp TGCAAGAGAGTCCTTAAGATACTGTATATCTTTGACTaGTGTGAGTTCAGGAAGCCCTGCAGTCAACATCAG +
Preference number: 3 (lower is better)
Translates to: CKRVLKILYIFD*CEFRKPCSQHQ
Trigger: CTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGACTCTCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR GCA 72 bp GTAGTCCAGCTTTCCCTGAGCGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCTTCTTCTTCACTCTTC +
Preference number: 3 (lower is better)
Translates to: VVQLSLSASSNF*LNCLSASSSLF
Trigger: GAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGCTGGACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 72 bp ATTTTCTTGATCTTGCAGCATTCCACAAGTATAAAATaGGGCAGGGCTCTGTTCATCACACAGTTCCGGATA +
Preference number: 3 (lower is better)
Translates to: IFLILQHSTSIK*GRALFITQFRI
Trigger: TATCCGGAACTGTGTGATGAACAGAGCCCTGCCCCATTTTATACTTGTGGAATGCTGCAAGATCAAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR-3UTR CAA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: YHRGLRAPNILWRISSSFGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR GCA 72 bp ATGTGCACTTCTGACCTAAGATGCCAAAATAGAAACTaGCCTATCCTCCGATTACCAAGTGCTCTTTCTAAT +
Preference number: 3 (lower is better)
Translates to: MCTSDLRCQNRN*PILRLPSALSN
Trigger: ATTAGAAAGAGCACTTGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGTGCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 72 bp CAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGAAATGATTATCCATTG +
Preference number: 3 (lower is better)
Translates to: QTKTETIPSSIP*RAKSAGNDYPL
Trigger: CAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR CCA 72 bp GCTTCTTTCCAGAGTAAATCCATCAAGCGCAACATTTaGAGTGTCAACATATCCTGTCGTAAATCATCACCA +
Preference number: 3 (lower is better)
Translates to: ASFQSKSIKRNI*SVNISCRKSSP
Trigger: TGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR CCA 72 bp GCTTCTTTCCAGAGTAAATCCATCAAGCGCAACATTTaGAGTGTCAACATATCCTGTCGTAAATCTAAGGGA +
Preference number: 3 (lower is better)
Translates to: ASFQSKSIKRNI*SVNISCRKSKG
Trigger: TCCCTTAGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469284.6
3UTR-3UTR CAA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCTTTTCCTCGCTGAATTaGCGCATTTTTCTTCGAAAT +
Preference number: 3 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPFSSLN*RIFLRN
Trigger: ATTTCGAAGAAAAATGCGCAAATTCAGCGAGGAAAA...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR GCA 72 bp AATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACTCTGAGTTCCAGGATT +
Preference number: 3 (lower is better)
Translates to: NHRGLFRLGSVG*LVLNLTLSSRI
Trigger: AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
3UTR GCA 72 bp AGTTTATCTTCTAAGTTTTCAGGGATGGATGGTTCATaGTCTGGTGGATATGTTTGTTTTAGCCAGTCCATC +
Preference number: 3 (lower is better)
Translates to: SLSSKFSGMDGS*SGGYVCFSQSI
Trigger: GATGGACTGGCTAAAACAAACATATCCACCAGAGCATGAACCATCCATCCCTGAAAACTTAGAAGATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR TCA 72 bp ATAACTGGATTGTTTCTAATACAAAGGATAAATGCTTaGGGTAATGGATACCCCAATTACCCTGATGCGATA +
Preference number: 3 (lower is better)
Translates to: ITGLFLIQRINA*GNGYPNYPDAI
Trigger: TATCGCATCAGGGTAATTGGGGTATCCATTACCTCAAGCATTTATCCTTTGTATTAGAAACAATCCAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR TCA 72 bp AAAGTCCAAATAAGATCCATTTCATTTTCACACAGTTaGGACAAGGGATCCCTGTCCAAGATTTCTTTCAAT +
Preference number: 3 (lower is better)
Translates to: KVQIRSISFSHS*DKGSLSKISFN
Trigger: ATTGAAAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAAATGGATCTTATTTGGACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CCA 72 bp CCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTaGAATCCATGTATTTGCACTTTTCAACATAGAGTT +
Preference number: 3 (lower is better)
Translates to: PCYCIPATKASF*NPCICTFQHRV
Trigger: AACTCTATGTTGAAAAGTGCAAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGCTGCGGCCTGGTTCATaGAATGGTGGGTGGCTACTA +
Preference number: 4 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLLRPGS*NGGWLL
Trigger: TAGTAGCCACCCACCATTTCATGAACCAGGCCGCAG...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGGGGCCTCCTATACCATaGCTGATGAGGCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLGPPIP*LMRLGN
Trigger: GTTTCCCAGCCTCATCAGGCATGGTATAGGAGGCCC...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGTCATTTTCACACAGTTaGGACAAGGGATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLSFSHS*DKGSLS
Trigger: GGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGA...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGCGGCGCCCCCATCCCTaGCTCTCTCGATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTRRPHP*LSRSPP
Trigger: GGGAGGTGATCGAGAGAGGCAGGGATGGGGGCGCCG...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674063.1
CDS-3UTR GCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTCCGCCGCCGCCGCCTaGTACTATTCCAAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVSAAAA*YYSKCA
Trigger: TGCGCACTTGGAATAGTAGCAGGCGGCGGCGGCGGA...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGTCTTTCCGAACTGTGTaGGCCATCCAGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLSFRTV*AIQFTL
Trigger: TAAAGTGAACTGGATGGCCCACACAGTTCGGAAAGA...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGCTGAGGAGACCCCTCTaGAAAGAATGGTATCCATTT +
Preference number: 4 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLLRRPL*KEWYPF
Trigger: AAATGGATACCATTCTTTCCAGAGGGGTCTCCTCAG...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTGGGTTCAGGGGTGACTaGAGGTCAGAGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSGFRGD*RSERAS
Trigger: GGAAGCCCTCTCTGACCTGCAGTCACCCCTGAACCC...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGGGGTTCAGGGGTGACTaGAGGTCAGAGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVGFRGD*RSERAS
Trigger: GGAAGCCCTCTCTGACCTGCAGTCACCCCTGAACCC...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAATCCTGGAAGTCTCAGTaGGTCTACACCAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQSWKSQ*VYTSPG
Trigger: TCCAGGGCTGGTGTAGACTCACTGAGACTTCCAGGA...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp GAACTGGACTGCTCCAGCATCTGCCCCATGAACAAGAGCTCCAAAGCAGCAGAGGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: ELDCSSICPMNKSSKAAEETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...CTCTGCTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGGAGCAGTCCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp GAACTGGACTGCTCCAGCATCTGCCCCATGAACAAGAGCTCCAAAGCAGCAGAGCTGCAGCAGCCACATTaGTACTGTTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: ELDCSSICPMNKSSKAAELQQPH*YCSAEC
Trigger: ACATTCAGCTGAACAGTAGCAATGTGGCTGCTGCAG...CTCTGCTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGGAGCAGTCCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTCGATCACCTCCCGCCTaGCCCGCGCAGCACTACACT +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCRSPPA*PAQHYT
Trigger: AGTGTAGTGCTGCGCGGGGCAGGCGGGAGGTGATCG...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCGGCGCCCCCATCCCTaGCTCTCTCGATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCRRPHP*LSRSPP
Trigger: GGGAGGTGATCGAGAGAGGCAGGGATGGGGGCGCCG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTCCTGGAAGTCTCAGTaGGTCTACACCAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSSWKSQ*VYTSPG
Trigger: TCCAGGGCTGGTGTAGACTCACTGAGACTTCCAGGA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATGGGTTCAGGGGTGACTaGAGGTCAGAGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHGFRGD*RSERAS
Trigger: GGAAGCCCTCTCTGACCTGCAGTCACCCCTGAACCC...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCGATCACCTCCCGCCTaGCCCGCGCAGCACTACACT +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCRSPPA*PAQHYT
Trigger: AGTGTAGTGCTGCGCGGGGCAGGCGGGAGGTGATCG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTCCGCCGCCGCCGCCTaGTACTATTCCAAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCSAAAA*YYSKCA
Trigger: TGCGCACTTGGAATAGTAGCAGGCGGCGGCGGCGGA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGCAAAGCAGCAGAGTCTaGCCTTGGCTCAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVQSSRV*PWLSAK
Trigger: CTTGGCACTGAGCCAAGGCCAGACTCTGCTGCTTTG...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAAATCAGATGCTATCTGTaGATCCACCGCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQIRCYL*IHRPDV
Trigger: GACATCTGGGCGGTGGATTCACAGATAGCATCTGAT...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAAAGGAGCTCAGTACCATaGAAAAGACCAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQRSSVP*KRPALT
Trigger: TGTCAGGGCTGGTCTTTTTCATGGTACTGAGCTCCT...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVCSQLQ*GQSDLL
Trigger: CAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCA...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GAACTGGACTGCTCCAGCATCTGCCCCATGAACAAGAGCTCCAAAGCAGCAGAGCATATCACCGAGGATTaGGAGCTCCCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: ELDCSSICPMNKSSKAAEHITED*ELPIFF
Trigger: AAAGAATATTGGGAGCTCTCAATCCTCGGTGATATG...CTCTGCTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGGAGCAGTCCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAACCAGCATCTGCCCCATaGACAAGAGCTCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKPASAP*TRAPKQ
Trigger: CTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGG...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAAAGATCTCTGAACAAACCTCTGCGGCCTGGTTCATaGAATGGTGGGTGGCTACTA +
Preference number: 4 (lower is better)
Translates to: AWFMKWWVATRQRSLNKPLRPGS*NGGWLL
Trigger: TAGTAGCCACCCACCATTTCATGAACCAGGCCGCAG...AGGTTTGTTCAGAGATCTTTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAACATTCTCCAAACCACTaGCCTGCGGCCTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKHSPNH*PAAWFM
Trigger: CATGAACCAGGCCGCAGGTCAGTGGTTTGGAGAATG...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCGGGTTCAGGGGTGACTaGAGGTCAGAGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SFPYHRGLRAPNILWRISGFRGD*RSERAS
Trigger: GGAAGCCCTCTCTGACCTGCAGTCACCCCTGAACCC...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCGGGTTCAGGGGTGACTaGAGGTCAGAGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPGFRGD*RSERAS
Trigger: GGAAGCCCTCTCTGACCTGCAGTCACCCCTGAACCC...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTAGGACACCTCCCATATaGATGGCTCCTTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSRTPPI*MAPYLR
Trigger: CCTGAGGTAAGGAGCCATGCATATGGGAGGTGTCCT...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp GCAACATCCGAAGATCCAAACCAGCTTCTTTCCAGAGTAAATCCATCAAGCGCATGCTACTATTCCAAGTaGGCAGTCAGCAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ATSEDPNQLLSRVNPSSACYYSK*AVSSPG
Trigger: GCCTGGGCTGCTGACTGCGCACTTGGAATAGTAGCA...TGCGCTTGATGGATTTACTCTGGAAAGAAGCTGGTTTGGATCTTCGGATGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR GCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGTCCGCCGCCGCCGCCTaGTACTATTCCAAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMSAAAA*YYSKCA
Trigger: TGCGCACTTGGAATAGTAGCAGGCGGCGGCGGCGGA...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGAGTGATGTGGCCTCCTTCCCTTTaGCTCTGTTTAACTTCACGG +
Preference number: 4 (lower is better)
Translates to: TDVSSGSPAVNISAKRVMWPPSL*LCLTSR
Trigger: CCGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCA...CATCACTCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGTCAAGGCCCTCCTTTTaGCTGAGGAGACCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWSRPSF*LRRPLW
Trigger: CCAGAGGGGTCTCCTCAGCCAAAAGGAGGGCCTTGA...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTATCAGATGCTATCTGTaGATCCACCGCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCIRCYL*IHRPDV
Trigger: GACATCTGGGCGGTGGATTCACAGATAGCATCTGAT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTAGGAGCTCAGTACCATaGAAAAGACCAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCRSSVP*KRPALT
Trigger: TGTCAGGGCTGGTCTTTTTCATGGTACTGAGCTCCT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTGAGTTCAGGAAGCCCTaGAGTCAACATCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCEFRKP*SQHQRK
Trigger: TTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTC...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGTCCAAGGAACTGGACTaGTCCAGCATCTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWSKELD*SSICPM
Trigger: CATGGGGCAGATGCTGGAGCAGTCCAGTTCCTTGGA...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAACCTCTGAGCTTACGATaGTTTTACACAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQPLSLR*FYTGAQ
Trigger: CTGAGCTCCTGTGTAAAACCATCGTAAGCTCAGAGG...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGGCCTCCTTCCCTTTaGCTCTGTTTAACTTCACGG +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSWPPSL*LCLTSR
Trigger: CCGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGCATCCTCACAACACTaGCGGAACCGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLASSQH*RNRPNF
Trigger: AAAGTTTGGCCGGTTCCGCCAGTGTTGTGAGGATGC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCACACCTCCCATATGCATaGCTCCTTACCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSHLPYA*LLTSGS
Trigger: GGAGCCTGAGGTAAGGAGCCATGCATATGGGAGGTG...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRCSQLQ*GQSDLL
Trigger: CAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGCATTCTCCAAACCACTaGCCTGCGGCCTGGTTCATG +
Preference number: 4 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMHSPNH*PAAWFM
Trigger: CATGAACCAGGCCGCAGGTCAGTGGTTTGGAGAATG...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp TCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGAGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: SLTDVSSGSPAVNISAKRETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...TCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp TCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGAACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 4 (lower is better)
Translates to: SLTDVSSGSPAVNISAKRTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...TCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PTESSPNTLLLYTSHKGFESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...GAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR GCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGGGTTCAGGGGTGACTaGAGGTCAGAGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFGFRGD*RSERAS
Trigger: GGAAGCCCTCTCTGACCTGCAGTCACCCCTGAACCC...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGCTGCAGCAGCCACATTaGTACTGTTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVLQQPH*YCSAEC
Trigger: ACATTCAGCTGAACAGTAGCAATGTGGCTGCTGCAG...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTTATTGAGTGCTTCAACCTGCTTAGAAAGCACTTTCATGTGCCCCACACTTCCGAGTTCAGGAAGCCCTaGAGTCAACATCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: LIECFNLLRKHFHVPHTSEFRKP*SQHQRK
Trigger: TTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTC...GGAAGTGTGGGGCACATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGAGTTCAGGAAGCCCTaGAGTCAACATCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLEFRKP*SQHQRK
Trigger: TTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGTCCAAGGAACTGGACTaGTCCAGCATCTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMSKELD*SSICPM
Trigger: CATGGGGCAGATGCTGGAGCAGTCCAGTTCCTTGGA...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSLNRYA*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACGCATCCTCACAACACTaGCGGAACCGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDASSQH*RNRPNF
Trigger: AAAGTTTGGCCGGTTCCGCCAGTGTTGTGAGGATGC...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTCCCCTCTGGAAAGAATaGTATCCATTTCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSPLWKE*YPFLPG
Trigger: GCCAGGAAGAAATGGATACCATTCTTTCCAGAGGGG...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAAAAACATACACTGCCTaGCGTTCCGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQKTYTA*RSAAAA
Trigger: GGCGGCGGCGGCGGAACGCCAGGCAGTGTATGTTTT...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674063.1
CDS-3UTR TCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAACTGGAAGAAAAGGTCTaGCATCACAGAGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKLEEKV*HHRVFV
Trigger: CACGAAGACTCTGTGATGTCAGACCTTTTCTTCCAG...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAAAATGAACAGCTACGATaGGCTTTCCCCCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQNEQLR*AFPHKV
Trigger: AACTTTATGGGGGAAAGCTCATCGTAGCTGTTCATT...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACAGGAGCTCAGTACCATaGAAAAGACCAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDRSSVP*KRPALT
Trigger: TGTCAGGGCTGGTCTTTTTCATGGTACTGAGCTCCT...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTTATTGAGTGCTTCAACCTGCTTAGAAAGCACTTTCATGTGCCCCACACTTCCTCATTTTCACACAGTTaGGACAAGGGATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LIECFNLLRKHFHVPHTSSFSHS*DKGSLS
Trigger: GGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGA...GGAAGTGTGGGGCACATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKTGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLTGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCCSQLQ*GQSDLL
Trigger: CAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGCTGTATATCTTTGACTaGTGTGAGTTCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVLYIFD*CEFRKP
Trigger: GGGCTTCCTGAACTCACATCAGTCAAAGATATACAG...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTCTGTATATCTTTGACTaGTGTGAGTTCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSLYIFD*CEFRKP
Trigger: GGGCTTCCTGAACTCACATCAGTCAAAGATATACAG...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTCTGCAGCAGCCACATTaGTACTGTTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLLQQPH*YCSAEC
Trigger: ACATTCAGCTGAACAGTAGCAATGTGGCTGCTGCAG...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTATCTTTGTTGAAGGCTaGTGCAGCAGCCACATTGCT +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLIFVEG*CSSHIA
Trigger: AGCAATGTGGCTGCTGCAGCAGCCTTCAACAAAGAT...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGGAGTTCAGGAAGCCCTaGAGTCAACATCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTEFRKP*SQHQRK
Trigger: TTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTC...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGTTCTTGGAGTTCCAGTaGCAAGTTCCAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWFLEFQ*QVPKAQ
Trigger: CTGGGCCTTTGGAACTTGGCACTGGAACTCCAAGAA...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCTGGCCTTGGCTCAGTaGCAAGTAACTACCCAGACT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQLALAQ*QVTTQT
Trigger: AGTCTGGGTAGTTACTTGGCACTGAGCCAAGGCCAG...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTGCTACTATTCCAAGTaGGCAGTCAGCAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCCYYSK*AVSSPG
Trigger: GCCTGGGCTGCTGACTGCGCACTTGGAATAGTAGCA...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTCTAAGTTTTCAGGGATaGATGGTTCATGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSLSFQG*MVHALV
Trigger: CACCAGAGCATGAACCATCCATCCCTGAAAACTTAG...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCCACAAGTATAAAATaGGGCAGGGCTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCSTSIK*GRALFI
Trigger: GATGAACAGAGCCCTGCCCCATTTTATACTTGTGGA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGGCCTCCTTCCCTTTaGCTCTGTTTAACTTCACGG +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHWPPSL*LCLTSR
Trigger: CCGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAATTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKLNRYA*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAA...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTTTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLLNRYA*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAA...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATGTGCACTTCTGACCTAAGATGCCAAAATAGAAACTGCCCTATCCTCCGATTAGCATCCTCACAACACTaGCGGAACCGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: MCTSDLRCQNRNCPILRLASSQH*RNRPNF
Trigger: AAAGTTTGGCCGGTTCCGCCAGTGTTGTGAGGATGC...TAATCGGAGGATAGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCGCATCCTCACAACACTaGCGGAACCGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPASSQH*RNRPNF
Trigger: AAAGTTTGGCCGGTTCCGCCAGTGTTGTGAGGATGC...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTCTTTCCGAACTGTGTaGGCCATCCAGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSSFRTV*AIQFTL
Trigger: TAAAGTGAACTGGATGGCCCACACAGTTCGGAAAGA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGGATGACACCAAATTGTACTGAGACAGCAGGAATGTGCACTTCTGACCTAAGACCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RMTPNCTETAGMCTSDLRPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...TCTTAGGTCAGAAGTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGCCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATCCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTAGCAGCTGGAAGAACTaGATCACACAGTTACCTAAC +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSSSWKN*ITQLPN
Trigger: GTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCT...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTCCCCTCTGGAAAGAATaGTATCCATTTCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLPLWKE*YPFLPG
Trigger: GCCAGGAAGAAATGGATACCATTCTTTCCAGAGGGG...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTCAAGGCCCTCCTTTTaGCTGAGGAGACCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYSRPSF*LRRPLW
Trigger: CCAGAGGGGTCTCCTCAGCCAAAAGGAGGGCCTTGA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CAA 72 bp TCACTGATTTGGCATGTATTTATCAAGGCCCTCCTTTaGGCTGAGGAGACCCCTCTGGAAAGAATGGTATCC +
Preference number: 4 (lower is better)
Translates to: SLIWHVFIKALL*AEETPLERMVS
Trigger: GGATACCATTCTTTCCAGAGGGGTCTCCTCAGCCAAAAGGAGGGCCTTGATAAATACATGCCAAATCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCATCAGATGCTATCTGTaGATCCACCGCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SFPYHRGLRAPNILWRISIRCYL*IHRPDV
Trigger: GACATCTGGGCGGTGGATTCACAGATAGCATCTGAT...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGCTGGAAGAAAAGGTCTaGCATCACAGAGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRLEEKV*HHRVFV
Trigger: CACGAAGACTCTGTGATGTCAGACCTTTTCTTCCAG...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGATTCTACTCTCCCGCTaGCTTGCAACACATAATCAT +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVILLSR*LATHNH
Trigger: ATGATTATGTGTTGCAAGTCAGCGGGAGAGTAGAAT...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTATTCTACTCTCCCGCTaGCTTGCAACACATAATCAT +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSILLSR*LATHNH
Trigger: ATGATTATGTGTTGCAAGTCAGCGGGAGAGTAGAAT...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTTTCCAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCAGGAGCTCAGTACCATaGAAAAGACCAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: LSRVNPSSATFGVSTYPVRSSVP*KRPALT
Trigger: TGTCAGGGCTGGTCTTTTTCATGGTACTGAGCTCCT...GACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTCATTTTCACACAGTTaGGACAAGGGATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHSFSHS*DKGSLS
Trigger: GGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDTGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCCSQLQ*GQSDLL
Trigger: CAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCA...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCAGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KSIKRNIWSVNISCRKSSEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...TGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCACCAGCATCTGCCCCATaGACAAGAGCTCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISPASAP*TRAPKQ
Trigger: CTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGG...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATACTCCCATCCTCAGCTaGGTTATTTCCAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHTPILS*VISKEL
Trigger: CAGTTCCTTGGAAATAACTCAGCTGAGGATGGGAGT...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGATGTCAAGGATGTCTaGCATAGCAGGAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLDVKDV*HSRRHY
Trigger: ATAATGCCTCCTGCTATGGCAGACATCCTTGACATC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAAAGATCTCTGAACAAACCTGGGATGGATGGTTCATaGTCTGGTGGATATGTTTGT +
Preference number: 4 (lower is better)
Translates to: AWFMKWWVATRQRSLNKPGMDGS*SGGYVC
Trigger: ACAAACATATCCACCAGAGCATGAACCATCCATCCC...AGGTTTGTTCAGAGATCTTTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTAGCACTATCACTGCTTaGAATCTCAGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLSTITA*NLSCLF
Trigger: GAAAAGGCAGCTGAGATTGCAAGCAGTGATAGTGCT...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCAGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: HQIPCYCIPATKASFWNPESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...TGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR GCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAAAAATCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCGGGTTCAGGGGTGACTaGAGGTCAGAGAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LKITPTESSPNTLLLYTSGFRGD*RSERAS
Trigger: GGAAGCCCTCTCTGACCTGCAGTCACCCCTGAACCC...GCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGCTGCAGCAGCCACATTaGTACTGTTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWLQQPH*YCSAEC
Trigger: ACATTCAGCTGAACAGTAGCAATGTGGCTGCTGCAG...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACATCTTTGTTGAAGGCTaGTGCAGCAGCCACATTGCT +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDIFVEG*CSSHIA
Trigger: AGCAATGTGGCTGCTGCAGCAGCCTTCAACAAAGAT...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTGGGCCTCCTATACCATaGCTGATGAGGCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIGPPIP*LMRLGN
Trigger: GTTTCCCAGCCTCATCAGGCATGGTATAGGAGGCCC...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp GCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAAAGATCTCTGAACAAACCTTCCACAAGTATAAAATaGGGCAGGGCTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: AWFMKWWVATRQRSLNKPSTSIK*GRALFI
Trigger: GATGAACAGAGCCCTGCCCCATTTTATACTTGTGGA...AGGTTTGTTCAGAGATCTTTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACCCTCTGAGCTTACGATaGTTTTACACAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDPLSLR*FYTGAQ
Trigger: CTGAGCTCCTGTGTAAAACCATCGTAAGCTCAGAGG...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRLNRYA*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTGTGTGGAAAAGTTGTTaGCTGAGTGACAATACTTGG +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCVWKSC*LSDNTW
Trigger: CCAAGTATTGTCACTCAGCCAACAACTTTTCCACAC...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAAGCAGCTGGAAGAACTaGATCACACAGTTACCTAAC +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKSSWKN*ITQLPN
Trigger: GTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCT...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCACACCTCCCATATGCATaGCTCCTTACCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISHLPYA*LLTSGS
Trigger: GGAGCCTGAGGTAAGGAGCCATGCATATGGGAGGTG...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCAAAGCAGCAGAGTCTaGCCTTGGCTCAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYQSSRV*PWLSAK
Trigger: CTTGGCACTGAGCCAAGGCCAGACTCTGCTGCTTTG...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp GCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAAAGATCTCTGAACAAACCTGTATCCATTTCTTCCTaGCAGTGTTCACCATTCTCC +
Preference number: 4 (lower is better)
Translates to: AWFMKWWVATRQRSLNKPVSISS*QCSPFS
Trigger: GGAGAATGGTGAACACTGCCAGGAAGAAATGGATAC...AGGTTTGTTCAGAGATCTTTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTGGGTTTGAATACTaGCTCCATCAACTACTCTGT +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCSGFEY*LHQLLC
Trigger: ACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCATCAGATGCTATCTGTaGATCCACCGCCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFIRCYL*IHRPDV
Trigger: GACATCTGGGCGGTGGATTCACAGATAGCATCTGAT...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGCTGGAAGAAAAGGTCTaGCATCACAGAGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMLEEKV*HHRVFV
Trigger: CACGAAGACTCTGTGATGTCAGACCTTTTCTTCCAG...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGCAGTTTTCAAAATaGACAGCTACGATGAGCTTT +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVWQFSK*TATMSF
Trigger: AAAGCTCATCGTAGCTGTTCATTTTGAAAACTGCCA...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTGGCAGTTTTCAAAATaGACAGCTACGATGAGCTTT +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCWQFSK*TATMSF
Trigger: AAAGCTCATCGTAGCTGTTCATTTTGAAAACTGCCA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCATCTTCCTTCCCATaGATAGTCAAACGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCSSSFP*IVKRFW
Trigger: CCAAAAACGTTTGACTATTCATGGGAAGGAAGATGA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGAGACCAGCCCTGACATaGACTTTTACAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWRPALT*TFTVSS
Trigger: AGAGGAAACTGTAAAAGTTCATGTCAGGGCTGGTCT...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACAGACCAGCCCTGACATaGACTTTTACAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDRPALT*TFTVSS
Trigger: AGAGGAAACTGTAAAAGTTCATGTCAGGGCTGGTCT...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TCCAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SRVNPSSATFGVSTYPVVTGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...TACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQTGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVSMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCSMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: ESSPNTLLLYTSHKGFILCSQLQ*GQSDLL
Trigger: CAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCA...CAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTGCTCACAACTTCAATaGGGCCAGAGCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYCSQLQ*GQSDLL
Trigger: CAGGAGATCGCTCTGGCCTCATTGAAGTTGTGAGCA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAGAAGGGCATCTTTGTTaGAGGCTGCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISEGHLC*RLLQQP
Trigger: TGGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTC...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCTGTATATCTTTGACTaGTGTGAGTTCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWLYIFD*CEFRKP
Trigger: GGGCTTCCTGAACTCACATCAGTCAAAGATATACAG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGATTAGGAGCGAAGGCTaGTCGTTAAGATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRIRSEG*SLRSVV
Trigger: GACTACAGATCTTAACGATCAGCCTTCGCTCCTAAT...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGACAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: SLTDVSSGSPAVNISAKRQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...TCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGTTGGTTTGTCTACTaGCTTGGCCATTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCGWFVY*LGHFLE
Trigger: CTCCAAGAAATGGCCAAGTCAGTAGACAAACCAACC...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTACTCCCATCCTCAGCTaGGTTATTTCCAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCTPILS*VISKEL
Trigger: CAGTTCCTTGGAAATAACTCAGCTGAGGATGGGAGT...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGGATGTCAAGGATGTCTaGCATAGCAGGAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWDVKDV*HSRRHY
Trigger: ATAATGCCTCCTGCTATGGCAGACATCCTTGACATC...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGGGGATGGATGGTTCATaGTCTGGTGGATATGTTTGT +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWGMDGS*SGGYVC
Trigger: ACAAACATATCCACCAGAGCATGAACCATCCATCCC...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAAGCTTGCAATCTCAGCTaGCTTTTCAATAATCTTATC +
Preference number: 4 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQACNLS*LFNNLI
Trigger: GATAAGATTATTGAAAAGGCAGCTGAGATTGCAAGC...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAAGCACTATCACTGCTTaGAATCTCAGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSSTITA*NLSCLF
Trigger: GAAAAGGCAGCTGAGATTGCAAGCAGTGATAGTGCT...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGAGCACTATCACTGCTTaGAATCTCAGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWSTITA*NLSCLF
Trigger: GAAAAGGCAGCTGAGATTGCAAGCAGTGATAGTGCT...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTTGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCTSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISESTFM*PTLPRQ
Trigger: CTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTC...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTTGAGTGCTTCAACCTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCLSAST*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTATCTTTGTTGAAGGCTaGTGCAGCAGCCACATTGCT +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCIFVEG*CSSHIA
Trigger: AGCAATGTGGCTGCTGCAGCAGCCTTCAACAAAGAT...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGTTCTTGGAGTTCCAGTaGCAAGTTCCAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMFLEFQ*QVPKAQ
Trigger: CTGGGCCTTTGGAACTTGGCACTGGAACTCCAAGAA...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGGGAAATCCACAGGTATaGAGCCATCAGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWGNPQV*SHQMLS
Trigger: AGATAGCATCTGATGGCTCCATACCTGTGGATTTCC...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACCTAAGTTTTCAGGGATaGATGGTTCATGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDLSFQG*MVHALV
Trigger: CACCAGAGCATGAACCATCCATCCCTGAAAACTTAG...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCCTCTGAGCTTACGATaGTTTTACACAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPPLSLR*FYTGAQ
Trigger: CTGAGCTCCTGTGTAAAACCATCGTAAGCTCAGAGG...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTCCTCTGAGCTTACGATaGTTTTACACAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCPLSLR*FYTGAQ
Trigger: CTGAGCTCCTGTGTAAAACCATCGTAAGCTCAGAGG...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGTGGCCTCCTTCCCTTTaGCTCTGTTTAACTTCACGG +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMWPPSL*LCLTSR
Trigger: CCGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCA...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTGCATCCTCACAACACTaGCGGAACCGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIASSQH*RNRPNF
Trigger: AAAGTTTGGCCGGTTCCGCCAGTGTTGTGAGGATGC...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCATCCTCACAACACTaGCGGAACCGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFASSQH*RNRPNF
Trigger: AAAGTTTGGCCGGTTCCGCCAGTGTTGTGAGGATGC...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACGCATCCTCACAACACTaGCGGAACCGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYASSQH*RNRPNF
Trigger: AAAGTTTGGCCGGTTCCGCCAGTGTTGTGAGGATGC...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCATCTTTCCGAACTGTGTaGGCCATCCAGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSSFRTV*AIQFTL
Trigger: TAAAGTGAACTGGATGGCCCACACAGTTCGGAAAGA...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGGATGACACCAAATTGTACTGAGACAGCAGGAATGTGCACTTCTGACCTAAGATCTTTCCGAACTGTGTaGGCCATCCAGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: RMTPNCTETAGMCTSDLRSFRTV*AIQFTL
Trigger: TAAAGTGAACTGGATGGCCCACACAGTTCGGAAAGA...TCTTAGGTCAGAAGTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACTCTTTCCGAACTGTGTaGGCCATCCAGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDSFRTV*AIQFTL
Trigger: TAAAGTGAACTGGATGGCCCACACAGTTCGGAAAGA...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGTGTGGAAAAGTTGTTaGCTGAGTGACAATACTTGG +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLVWKSC*LSDNTW
Trigger: CCAAGTATTGTCACTCAGCCAACAACTTTTCCACAC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGCTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAACATTATAGAAGCAGCTaGAAGAACTGGATCACACAG +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKHYRSS*KNWITQ
Trigger: CTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATG...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGACTTGGCCATTTCTTaGAGTTCCAGTGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMDLAIS*SSSAKF
Trigger: GAACTTGGCACTGGAACTCCAAGAAATGGCCAAGTC...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCGCCTGGTTCATGAAATaGTGGGTGGCTACTAGACAA +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPAWFMK*WVATRQ
Trigger: TTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGCTGAGGAGACCCCTCTaGAAAGAATGGTATCCATTT +
Preference number: 4 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTLRRPL*KEWYPF
Trigger: AAATGGATACCATTCTTTCCAGAGGGGTCTCCTCAG...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CAA 72 bp TGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WKHSKSRGNHRG*FRLGSVGCLVL
Trigger: AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
3UTR CAA 72 bp GAAGAGGCCATAATAAGCCTTAGCCTATTCCTGAGGTaGGTTTGTCTACTGACTTGGCCATTTCTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: EEAIISLSLFLR*VCLLTWPFLGV
Trigger: AACTCCAAGAAATGGCCAAGTCAGTAGACAAACCAACCTCAGGAATAGGCTAAGGCTTATTATGGCCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATAATGAACAGCTACGATaGGCTTTCCCCCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHNEQLR*AFPHKV
Trigger: AACTTTATGGGGGAAAGCTCATCGTAGCTGTTCATT...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGAGACCAGCCCTGACATaGACTTTTACAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQRPALT*TFTVSS
Trigger: AGAGGAAACTGTAAAAGTTCATGTCAGGGCTGGTCT...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGAAAAAGACCAGCCCTaGCATGAACTTTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLEKDQP*HELLQF
Trigger: AAACTGTAAAAGTTCATGTCAGGGCTGGTCTTTTTC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCTGTATATCTTTGACTaGTGTGAGTTCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQLYIFD*CEFRKP
Trigger: GGGCTTCCTGAACTCACATCAGTCAAAGATATACAG...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTTTCCCTGAGCGCCTCATCAAATTTTTGCTTAAACTGTTTGAGTGCTTCTTCATTAGGAGCGAAGGCTaGTCGTTAAGATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AFPERLIKFLLKLFECFFIRSEG*SLRSVV
Trigger: GACTACAGATCTTAACGATCAGCCTTCGCTCCTAAT...GAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCATATCACCGAGGATTaGGAGCTCCCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWHITED*ELPIFF
Trigger: AAAGAATATTGGGAGCTCTCAATCCTCGGTGATATG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGGGTTGGTTTGTCTACTaGCTTGGCCATTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKGWFVY*LGHFLE
Trigger: CTCCAAGAAATGGCCAAGTCAGTAGACAAACCAACC...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGGATGTCAAGGATGTCTaGCATAGCAGGAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQDVKDV*HSRRHY
Trigger: ATAATGCCTCCTGCTATGGCAGACATCCTTGACATC...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTTTCCAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGATGTCAAGGATGTCTaGCATAGCAGGAGGCATTAT +
Preference number: 4 (lower is better)
Translates to: LSRVNPSSATFGVSTYPVDVKDV*HSRRHY
Trigger: ATAATGCCTCCTGCTATGGCAGACATCCTTGACATC...GACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR GCA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTGCTTGCAATCTCAGCTaGCTTTTCAATAATCTTATC +
Preference number: 4 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSACNLS*LFNNLI
Trigger: GATAAGATTATTGAAAAGGCAGCTGAGATTGCAAGC...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCAGCACTATCACTGCTTaGAATCTCAGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PTESSPNTLLLYTSHKGFSTITA*NLSCLF
Trigger: GAAAAGGCAGCTGAGATTGCAAGCAGTGATAGTGCT...GAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGTGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKTSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTTATTGAGTGCTTCAACCTGCTTAGAAAGCACTTTCATGTGCCCCACACTTCCTTGAGTGCTTCAACCTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: LIECFNLLRKHFHVPHTSLSAST*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAA...GGAAGTGTGGGGCACATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTTTGAGTGCTTCAACCTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLLSAST*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAA...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGTGTTTTAAACAGGTATaGATGGCCTCCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWCFKQV*MASFPL
Trigger: CAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACA...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGTTTTAAACAGGTATaGATGGCCTCCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHCFKQV*MASFPL
Trigger: CAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACTGTTTTAAACAGGTATaGATGGCCTCCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDCFKQV*MASFPL
Trigger: CAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACA...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCTGCAGCAGCCACATTaGTACTGTTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCLQQPH*YCSAEC
Trigger: ACATTCAGCTGAACAGTAGCAATGTGGCTGCTGCAG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGATCTTTGTTGAAGGCTaGTGCAGCAGCCACATTGCT +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKIFVEG*CSSHIA
Trigger: AGCAATGTGGCTGCTGCAGCAGCCTTCAACAAAGAT...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTATGAAGAGATTCCCATaGCGTCGTAAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCMKRFP*RRKIRY
Trigger: ATATCTGATTTTACGACGGCATGGGAATCTCTTCAT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGATGAAGAGATTCCCATaGCGTCGTAAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVMKRFP*RRKIRY
Trigger: ATATCTGATTTTACGACGGCATGGGAATCTCTTCAT...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAGAGTTCAGGAAGCCCTaGAGTCAACATCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISEFRKP*SQHQRK
Trigger: TTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTC...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTGAGTTCAGGAAGCCCTaGAGTCAACATCAGCGCAAA +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIEFRKP*SQHQRK
Trigger: TTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTC...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAAGGACACCTCCCATATaGATGGCTCCTTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISRTPPI*MAPYLR
Trigger: CCTGAGGTAAGGAGCCATGCATATGGGAGGTGTCCT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCCAAACCACTGACCTaGGGCCTGGTTCATGAAATG +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRISKPLT*GLVHEM
Trigger: CATTTCATGAACCAGGCCGCAGGTCAGTGGTTTGGA...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGGAAATCCACAGGTATaGAGCCATCAGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMGNPQV*SHQMLS
Trigger: AGATAGCATCTGATGGCTCCATACCTGTGGATTTCC...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGGGATATAAATCCCAGTaGGCAAAAGGAAATCCACAG +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRGYKSQ*AKGNPQ
Trigger: CTGTGGATTTCCTTTTGCCCACTGGGATTTATATCC...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCTTTCCCTGAGCGCCTCATCAAATTTTTGCTTAAACTGTTTGAGTGCTTCTTCTCCACAAGTATAAAATaGGGCAGGGCTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: AFPERLIKFLLKLFECFFSTSIK*GRALFI
Trigger: GATGAACAGAGCCCTGCCCCATTTTATACTTGTGGA...GAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR CCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGTTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMLNRYA*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAA...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGTCCAAAGTCAATGTaGAAGAGCTGGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHCPKSM*KSWPVF
Trigger: AAAAACTGGCCAGCTCTTCCACATTGACTTTGGACA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTGTCCAAAGTCAATGTaGAAGAGCTGGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRCPKSM*KSWPVF
Trigger: AAAAACTGGCCAGCTCTTCCACATTGACTTTGGACA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGTGTCCAAAGTCAATGTaGAAGAGCTGGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWCPKSM*KSWPVF
Trigger: AAAAACTGGCCAGCTCTTCCACATTGACTTTGGACA...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCACCTAGTAGCATTCCTTaGCGTGCAAAGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HQIPCYCIPATKASFWNPPSSIP*RAKSAG
Trigger: TCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGG...TGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAGTGTGGAAAAGTTGTTaGCTGAGTGACAATACTTGG +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSVWKSC*LSDNTW
Trigger: CCAAGTATTGTCACTCAGCCAACAACTTTTCCACAC...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAACTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGCAGCTGGAAGAACTaGATCACACAGTTACCTAAC +
Preference number: 4 (lower is better)
Translates to: SFPYHRGLRAPNILWRISSSWKN*ITQLPN
Trigger: GTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCT...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
3UTR CAA 72 bp CTGGTGATGCTGATGCTCCTCATCAGGGGACCACACTaGGAGAATGATTGCTATAGATTAACAACAATGAAA +
Preference number: 4 (lower is better)
Translates to: LVMLMLLIRGPH*ENDCYRLTTMK
Trigger: TTTCATTGTTGTTAATCTATAGCAATCATTCTCCAAGTGTGGTCCCCTGATGAGGAGCATCAGCATCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CAA 72 bp CCTAATGCAAGAGAGTCCTTAAGATACTGTATATCTTaGACTGATGTGAGTTCAGGAAGCCCTGCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: PNARESLRYCIS*TDVSSGSPAVN
Trigger: GTTGACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGACTCTCTTGCATTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCACTGGAAGAAAAGGTCTaGCATCACAGAGTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: HQIPCYCIPATKASFWNPLEEKV*HHRVFV
Trigger: CACGAAGACTCTGTGATGTCAGACCTTTTCTTCCAG...TGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGAATGAACAGCTACGATaGGCTTTCCCCCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMNEQLR*AFPHKV
Trigger: AACTTTATGGGGGAAAGCTCATCGTAGCTGTTCATT...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAGAAAAAGACCAGCCCTaGCATGAACTTTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSEKDQP*HELLQF
Trigger: AAACTGTAAAAGTTCATGTCAGGGCTGGTCTTTTTC...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAAGGAGCTCAGTACCATaGAAAAGACCAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQRSSVP*KRPALT
Trigger: TGTCAGGGCTGGTCTTTTTCATGGTACTGAGCTCCT...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAGCTTTCCTGATGGTCTaGTATTTAGAGGGATTAATA +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKAFLMV*YLEGLI
Trigger: TATTAATCCCTCTAAATATCAGACCATCAGGAAAGC...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGTATATGGATTTGTTTaGACAGTTCCCATTGGATTC +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLVYGFV*TVPIGF
Trigger: GAATCCAATGGGAACTGTTCAAACAAATCCATATAC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTTTCACACAGTTaGGACAAGGGATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRISFSHS*DKGSLS
Trigger: GGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGA...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTCATTTTCACACAGTTaGGACAAGGGATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LNPHQIPCYCIPATKASFSFSHS*DKGSLS
Trigger: GGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGA...AAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRITGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFTGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHSMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GATCCATTTCATTTTCACACAGTTGAGACAAGGGATCCCTGTCCAAGATTTCTTCTGTATATCTTTGACTaGTGTGAGTTCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DPFHFHTVETRDPCPRFLLYIFD*CEFRKP
Trigger: GGGCTTCCTGAACTCACATCAGTCAAAGATATACAG...AAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAAATGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCATTAGGAGCGAAGGCTaGTCGTTAAGATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFIRSEG*SLRSVV
Trigger: GACTACAGATCTTAACGATCAGCCTTCGCTCCTAAT...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGATTAGGAGCGAAGGCTaGTCGTTAAGATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMIRSEG*SLRSVV
Trigger: GACTACAGATCTTAACGATCAGCCTTCGCTCCTAAT...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCATATCACCGAGGATTaGGAGCTCCCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPHITED*ELPIFF
Trigger: AAAGAATATTGGGAGCTCTCAATCCTCGGTGATATG...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGCTCACTCATTTATTTaGCTGAGAACATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLAHSFI*LRTLRR
Trigger: CCTTCTTAATGTTCTCAGTCAAATAAATGAGTGAGC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCTTACTTTCTGGGTTTaGATACTGGCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQLTFWV*ILAPST
Trigger: AGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAG...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGCTTGCAATCTCAGCTaGCTTTTCAATAATCTTATC +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLACNLS*LFNNLI
Trigger: GATAAGATTATTGAAAAGGCAGCTGAGATTGCAAGC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGAGCACTATCACTGCTTaGAATCTCAGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKSTITA*NLSCLF
Trigger: GAAAAGGCAGCTGAGATTGCAAGCAGTGATAGTGCT...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGTGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWTSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCAGAGACAGCAGGAATGTaGACTTCTGACCTAAGATGC +
Preference number: 4 (lower is better)
Translates to: HQIPCYCIPATKASFWNPETAGM*TSDLRC
Trigger: GCATCTTAGGTCAGAAGTGCACATTCCTGCTGTCTC...TGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR GCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACTTGAGTGCTTCAACCTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDLSAST*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAA...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTCTGCAGCAGCCACATTaGTACTGTTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFLQQPH*YCSAEC
Trigger: ACATTCAGCTGAACAGTAGCAATGTGGCTGCTGCAG...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTATCTTTGTTGAAGGCTaGTGCAGCAGCCACATTGCT +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIIFVEG*CSSHIA
Trigger: AGCAATGTGGCTGCTGCAGCAGCCTTCAACAAAGAT...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAAAGATCTCTGAACAAACCTATGAAGAGATTCCCATaGCGTCGTAAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: AWFMKWWVATRQRSLNKPMKRFP*RRKIRY
Trigger: ATATCTGATTTTACGACGGCATGGGAATCTCTTCAT...AGGTTTGTTCAGAGATCTTTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTATGAAGAGATTCCCATaGCGTCGTAAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLMKRFP*RRKIRY
Trigger: ATATCTGATTTTACGACGGCATGGGAATCTCTTCAT...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGCTTAAACTGTTTGAGTaGTTCTTCTTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRLKLFE*FFFTLP
Trigger: GGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAG...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCTTAAACTGTTTGAGTaGTTCTTCTTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWLKLFE*FFFTLP
Trigger: GGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGGCTTGCAATCTCAGCTaGCTTTTCAATAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWACNLS*LFNNQE
Trigger: TTCCTGATTATTGAAAAGGCAGCTGAGATTGCAAGC...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469284.6
ENST00000544716.5
CDS-3UTR CCA 90 bp CTTTCCAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGGATATAAATCCCAGTaGGCAAAAGGAAATCCACAG +
Preference number: 4 (lower is better)
Translates to: LSRVNPSSATFGVSTYPVGYKSQ*AKGNPQ
Trigger: CTGTGGATTTCCTTTTGCCCACTGGGATTTATATCC...GACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR CCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCCTAAGTTTTCAGGGATaGATGGTTCATGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFLSFQG*MVHALV
Trigger: CACCAGAGCATGAACCATCCATCCCTGAAAACTTAG...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGTCCACAAGTATAAAATaGGGCAGGGCTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMSTSIK*GRALFI
Trigger: GATGAACAGAGCCCTGCCCCATTTTATACTTGTGGA...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTTTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFLNRYA*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAA...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTGTCCAAAGTCAATGTaGAAGAGCTGGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCCPKSM*KSWPVF
Trigger: AAAAACTGGCCAGCTCTTCCACATTGACTTTGGACA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCGTGTGGAAAAGTTGTTaGCTGAGTGACAATACTTGG +
Preference number: 4 (lower is better)
Translates to: SFPYHRGLRAPNILWRISVWKSC*LSDNTW
Trigger: CCAAGTATTGTCACTCAGCCAACAACTTTTCCACAC...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTAGCAGCTGGAAGAACTaGATCACACAGTTACCTAAC +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCSSWKN*ITQLPN
Trigger: GTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCT...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TTCACACAGTTGAGACAAGGGATCCCTGTCCAAGATTTCTTTCAATACAGGAAGCATTATAGAAGCAGCTaGAAGAACTGGATCACACAG +
Preference number: 4 (lower is better)
Translates to: FTQLRQGIPVQDFFQYRKHYRSS*KNWITQ
Trigger: CTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATG...CTTCCTGTATTGAAAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCATTATAGAAGCAGCTaGAAGAACTGGATCACACAG +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPHYRSS*KNWITQ
Trigger: CTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATG...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGACTTGGCCATTTCTTaGAGTTCCAGTGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFDLAIS*SSSAKF
Trigger: GAACTTGGCACTGGAACTCCAAGAAATGGCCAAGTC...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGTGGTTCATGAAATGGTaGGTGGCTACTAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQWFMKW*VATRQR
Trigger: TCTTTGTCTAGTAGCCACCCACCATTTCATGAACCA...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAGCCTGGTTCATGAAATaGTGGGTGGCTACTAGACAA +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISAWFMK*WVATRQ
Trigger: TTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGTCAGGGGACCACACTTaGAGAATGATTGCTATAGAT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQSGDHT*RMIAID
Trigger: ATCTATAGCAATCATTCTCCAAGTGTGGTCCCCTGA...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CAA 72 bp TCCCTGAGCGCCTCATCAAATTTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTCTTCCCTAATGCAAGA +
Preference number: 4 (lower is better)
Translates to: SLSASSNFCLNC*SASSSLFPNAR
Trigger: TCTTGCATTAGGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CAA 72 bp AGTAGTCCAGCTTTCCCTGAGCGCCTCATCAAATTTTaGCTTAAACTGTTTGAGTGCTTCTTCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: SSPAFPERLIKF*LKLFECFFFTL
Trigger: AAGAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGCGCTCAGGGAAAGCTGGACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTCATATACAGCAGTCTaGTTCACACATGCAAACATA +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRSYTAV*FTHANI
Trigger: TATGTTTGCATGTGTGAATCAGACTGCTGTATATGA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTGGCAGTTTTCAAAATaGACAGCTACGATGAGCTTT +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCWQFSK*TATMSF
Trigger: AAAGCTCATCGTAGCTGTTCATTTTGAAAACTGCCA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTATTCTACTCTCCCGCTaGCTTGCAACACATAATCAT +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCILLSR*LATHNH
Trigger: ATGATTATGTGTTGCAAGTCAGCGGGAGAGTAGAAT...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGAAGAGGAAGATTAGATaGATTTCGATTTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRKRKIR*ISIYGS
Trigger: GCTGCCATAAATCGAAATTCATCTAATCTTCCTCTT...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TTCACACAGTTGAGACAAGGGATCCCTGTCCAAGATTTCTTTCAATACAGGAAGGAAAAAGACCAGCCCTaGCATGAACTTTTACAGTTT +
Preference number: 4 (lower is better)
Translates to: FTQLRQGIPVQDFFQYRKEKDQP*HELLQF
Trigger: AAACTGTAAAAGTTCATGTCAGGGCTGGTCTTTTTC...CTTCCTGTATTGAAAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAGCTTTCCTGATGGTCTaGTATTTAGAGGGATTAATA +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSAFLMV*YLEGLI
Trigger: TATTAATCCCTCTAAATATCAGACCATCAGGAAAGC...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGGTATATGGATTTGTTTaGACAGTTCCCATTGGATTC +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRVYGFV*TVPIGF
Trigger: GAATCCAATGGGAACTGTTCAAACAAATCCATATAC...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAATCATTTTCACACAGTTaGGACAAGGGATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQSFSHS*DKGSLS
Trigger: GGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGA...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQSMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCACCTGTTTTTCCTTGTTaGATGACATGGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSPVFPC*MTWMKS
Trigger: TGATTTCATCCATGTCATTCAACAAGGAAAAACAGG...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATCCTGTTTTTCCTTGTTaGATGACATGGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHPVFPC*MTWMKS
Trigger: TGATTTCATCCATGTCATTCAACAAGGAAAAACAGG...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACCCTGTTTTTCCTTGTTaGATGACATGGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDPVFPC*MTWMKS
Trigger: TGATTTCATCCATGTCATTCAACAAGGAAAAACAGG...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTATTAGGAGCGAAGGCTaGTCGTTAAGATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIIRSEG*SLRSVV
Trigger: GACTACAGATCTTAACGATCAGCCTTCGCTCCTAAT...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 4 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: SFPYHRGLRAPNILWRISQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGGATTTCCGTGTGGCGTaGAACCATTTCAATTTGAAC +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMDFRVA*NHFNLN
Trigger: GTTCAAATTGAAATGGTTTCACGCCACACGGAAATC...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGCATATCACCGAGGATTaGGAGCTCCCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKHITED*ELPIFF
Trigger: AAAGAATATTGGGAGCTCTCAATCCTCGGTGATATG...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAGCTCACTCATTTATTTaGCTGAGAACATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSAHSFI*LRTLRR
Trigger: CCTTCTTAATGTTCTCAGTCAAATAAATGAGTGAGC...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATGCTCACTCATTTATTTaGCTGAGAACATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHAHSFI*LRTLRR
Trigger: CCTTCTTAATGTTCTCAGTCAAATAAATGAGTGAGC...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAAGCACTATCACTGCTTaGAATCTCAGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISSTITA*NLSCLF
Trigger: GAAAAGGCAGCTGAGATTGCAAGCAGTGATAGTGCT...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGTGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR GCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCTGTTTTAAACAGGTATaGATGGCCTCCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFCFKQV*MASFPL
Trigger: CAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACA...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATATCTTTGTTGAAGGCTaGTGCAGCAGCCACATTGCT +
Preference number: 4 (lower is better)
Translates to: TKYLVIVYQPQRLHFGIHIFVEG*CSSHIA
Trigger: AGCAATGTGGCTGCTGCAGCAGCCTTCAACAAAGAT...ATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGATGAAGAGATTCCCATaGCGTCGTAAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWMKRFP*RRKIRY
Trigger: ATATCTGATTTTACGACGGCATGGGAATCTCTTCAT...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCTTAAACTGTTTGAGTaGTTCTTCTTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQLKLFE*FFFTLP
Trigger: GGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAG...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAATTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKLGSVG*LVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACTTATGGCAGCCTCTATaGCAATCATTTCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDLWQPL*QSFLVH
Trigger: ATGAACAAGAAATGATTGCCATAGAGGCTGCCATAA...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCACCTCTGAGCTTACGATaGTTTTACACAGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISPLSLR*FYTGAQ
Trigger: CTGAGCTCCTGTGTAAAACCATCGTAAGCTCAGAGG...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCATTGAACAGTTCCCATTaGATTCAACATTTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSLNSSH*IQHFFE
Trigger: CTCGAAGAAATGTTGAATCCAATGGGAACTGTTCAA...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTGAACAGTTCCCATTaGATTCAACATTTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRLNSSH*IQHFFE
Trigger: CTCGAAGAAATGTTGAATCCAATGGGAACTGTTCAA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAATTAAACAGGTATGCATaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQLNRYA*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGCCATGCATACCTGTTTAA...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: SLRYCISLTDVSSGSPAVIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...GACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp CTTTCCAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: LSRVNPSSATFGVSTYPVIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...GACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCTGTCCAAAGTCAATGTaGAAGAGCTGGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFCPKSM*KSWPVF
Trigger: AAAAACTGGCCAGCTCTTCCACATTGACTTTGGACA...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTGTGTGGAAAAGTTGTTaGCTGAGTGACAATACTTGG +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCVWKSC*LSDNTW
Trigger: CCAAGTATTGTCACTCAGCCAACAACTTTTCCACAC...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCCTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: SLRYCISLTDVSSGSPAVLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...GACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTTTAAAGATTTCCGTGTaGCGTGAAACCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLLKISV*RETISI
Trigger: AATTGAAATGGTTTCACGCCACACGGAAATCTTTAA...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAGTATCCATTTCTTCCTaGCAGTGTTCACCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISVSISS*QCSPFS
Trigger: GGAGAATGGTGAACACTGCCAGGAAGAAATGGATAC...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGTCTGGGTTTGAATACTaGCTCCATCAACTACTCTGT +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMSGFEY*LHQLLC
Trigger: ACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGA...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGTCAGGGGACCACACTTaGAGAATGATTGCTATAGAT +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKSGDHT*RMIAID
Trigger: ATCTATAGCAATCATTCTCCAAGTGTGGTCCCCTGA...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAATTCTACTCTCCCGCTaGCTTGCAACACATAATCAT +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISILLSR*LATHNH
Trigger: ATGATTATGTGTTGCAAGTCAGCGGGAGAGTAGAAT...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTATATGGATTTGTTTaGACAGTTCCCATTGGATTC +
Preference number: 4 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMVYGFV*TVPIGF
Trigger: GAATCCAATGGGAACTGTTCAAACAAATCCATATAC...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR TCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGTATATGGATTTGTTTaGACAGTTCCCATTGGATTC +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCVYGFV*TVPIGF
Trigger: GAATCCAATGGGAACTGTTCAAACAAATCCATATAC...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TTAAAAATCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCACTGGTCTGGATAGTTaGAATCCAGAAGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: LKITPTESSPNTLLLYTSTGLDS*NPEALG
Trigger: CCCTAGAGCTTCTGGATTTCAACTATCCAGACCAGT...GCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp CGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTTAAAAGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: RNIWSVNISCRKSSPFLKDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...TTTTAAAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR TCA 90 bp TTAAAAATCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: LKITPTESSPNTLLLYTSDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...GCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp TACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTTGACACCAAATTGTACTaGGACAGCAGGAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: YLVIVYQPQRLHFGIHVFDTKLY*DSRNVH
Trigger: GTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTC...AAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp CAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAAAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: QSKSIKRNIWSVNISCRKSMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...TTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTCCTGTTTTTCCTTGTTaGATGACATGGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCPVFPC*MTWMKS
Trigger: TGATTTCATCCATGTCATTCAACAAGGAAAAACAGG...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAACTGTATATCTTTGACTaGTGTGAGTTCAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQLYIFD*CEFRKP
Trigger: GGGCTTCCTGAACTCACATCAGTCAAAGATATACAG...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAATTAGGAGCGAAGGCTaGTCGTTAAGATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISIRSEG*SLRSVV
Trigger: GACTACAGATCTTAACGATCAGCCTTCGCTCCTAAT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 4 (lower is better)
Translates to: LNPHQIPCYCIPATKASFKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...AAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp TCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTCATATCACCGAGGATTaGGAGCTCCCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: SSATFGVSTYPVVNHHHFHITED*ELPIFF
Trigger: AAAGAATATTGGGAGCTCTCAATCCTCGGTGATATG...AAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTTACTTTCTGGGTTTaGATACTGGCTCCATCAACT +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYLTFWV*ILAPST
Trigger: AGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAG...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR GCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAGGGATGGATGGTTCATaGTCTGGTGGATATGTTTGT +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISGMDGS*SGGYVC
Trigger: ACAAACATATCCACCAGAGCATGAACCATCCATCCC...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCGCTTGCAATCTCAGCTaGCTTTTCAATAATCTTATC +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPACNLS*LFNNLI
Trigger: GATAAGATTATTGAAAAGGCAGCTGAGATTGCAAGC...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCTSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTTACTTCCCCGGCAGTATaGTTCAAGGATGACACCAAA +
Preference number: 4 (lower is better)
Translates to: YLVIVYQPQRLHFGIHVFTSPAV*FKDDTK
Trigger: TTTGGTGTCATCCTTGAAGCATACTGCCGGGGAAGT...AAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR GCA 90 bp CAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATTGAGTGCTTCAACCTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: QSKSIKRNIWSVNISCRKLSAST*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAA...TTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCTTGAGTGCTTCAACCTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFLSAST*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAA...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATGTTTTAAACAGGTATaGATGGCCTCCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISCFKQV*MASFPL
Trigger: CAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACA...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTCACACAGTTGAGACAAGGGATCCCTGTCCAAGATTTCTTTCAATACAGGAAGATGAAGAGATTCCCATaGCGTCGTAAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: FTQLRQGIPVQDFFQYRKMKRFP*RRKIRY
Trigger: ATATCTGATTTTACGACGGCATGGGAATCTCTTCAT...CTTCCTGTATTGAAAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGCTTAAACTGTTTGAGTaGTTCTTCTTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMLKLFE*FFFTLP
Trigger: GGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAG...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCCTTAAACTGTTTGAGTaGTTCTTCTTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFLKLFE*FFFTLP
Trigger: GGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAG...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSASSNF*LNCLSA
Trigger: AGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGC...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRASSNF*LNCLSA
Trigger: AGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGC...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCATTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSLGSVG*LVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAAAGATACAATTTGGTaGCCATATGGGAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWKDTIW*PYGKNS
Trigger: ACTGTTTTTCCCATATGGGCACCAAATTGTATCTTT...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCAAGGAGGTTGAACATTaGGTAATTGTGAACTTGCTT +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPKEVEH*VIVNLL
Trigger: AAGCAAGTTCACAATTACCCAATGTTCAACCTCCTT...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGTTATGGCAGCCTCTATaGCAATCATTTCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQLWQPL*QSFLVH
Trigger: ATGAACAAGAAATGATTGCCATAGAGGCTGCCATAA...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LNPHQIPCYCIPATKASFSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...AAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATCGAACGTACTGGTCTaGATAGTTGAAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISSNVLV*IVEIQK
Trigger: CTTCTGGATTTCAACTATCCAGACCAGTACGTTCGA...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTTGTCCAAAGTCAATGTaGAAGAGCTGGCCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFCPKSM*KSWPVF
Trigger: AAAAACTGGCCAGCTCTTCCACATTGACTTTGGACA...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCATCTTTCCGAACTGTGTaGGCCATCCAGTTCACTTTA +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISSFRTV*AIQFTL
Trigger: TAAAGTGAACTGGATGGCCCACACAGTTCGGAAAGA...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGCTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCTTTTTAGCTTCATTTaGACAGTAAGAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCLFSFI*TVRTAT
Trigger: GGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCATTATAGAAGCAGCTaGAAGAACTGGATCACACAG +
Preference number: 4 (lower is better)
Translates to: PHQIPCYCIPATKASFWNHYRSS*KNWITQ
Trigger: CTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATG...ATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACTTAAAGATTTCCGTGTaGCGTGAAACCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: APNILWRISSSFAGCCQDLKISV*RETISI
Trigger: AATTGAAATGGTTTCACGCCACACGGAAATCTTTAA...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTGGTTCATGAAATGGTaGGTGGCTACTAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYWFMKW*VATRQR
Trigger: TCTTTGTCTAGTAGCCACCCACCATTTCATGAACCA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
3UTR CAA 72 bp ATGATCACCAAAAACATATTCTACTCTCCCGCTGACTaGCAACACATAATCATAGGGGCTAACTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: MITKNIFYSPAD*QHIIIGANFIF
Trigger: GAAGATGAAGTTAGCCCCTATGATTATGTGTTGCAAGTCAGCGGGAGAGTAGAATATGTTTTTGGTGATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462898.5
3UTR CAA 72 bp ATCACTCCAACTGAATCCTCACCAAATACCTTGTTATaGTATACCAGCCACAAAGGCTTCATTTTGGAATCC +
Preference number: 4 (lower is better)
Translates to: ITPTESSPNTLL*YTSHKGFILES
Trigger: GGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAAATGAACAGCTACGATaGGCTTTCCCCCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISNEQLR*AFPHKV
Trigger: AACTTTATGGGGGAAAGCTCATCGTAGCTGTTCATT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTCATCTTCCTTCCCATaGATAGTCAAACGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYSSSFP*IVKRFW
Trigger: CCAAAAACGTTTGACTATTCATGGGAAGGAAGATGA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATCATCTTCCTTCCCATaGATAGTCAAACGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISSSSFP*IVKRFW
Trigger: CCAAAAACGTTTGACTATTCATGGGAAGGAAGATGA...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTTCATCTTCCTTCCCATaGATAGTCAAACGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFSSSFP*IVKRFW
Trigger: CCAAAAACGTTTGACTATTCATGGGAAGGAAGATGA...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGCCTGTTTTTCCTTGTTaGATGACATGGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKPVFPC*MTWMKS
Trigger: TGATTTCATCCATGTCATTCAACAAGGAAAAACAGG...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAAAGTTGTTGGCTGAGTaGCAATACTTGGTCACAACA +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQKLLAE*QYLVTT
Trigger: TGTTGTGACCAAGTATTGTCACTCAGCCAACAACTT...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTCAAGTCTGGCTGGAATaGTGCTATCATGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: SSATFGVSTYPVVNHHHFQVWLE*CYHGNK
Trigger: TTTATTTCCATGATAGCATCATTCCAGCCAGACTTG...AAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGGCTCACTCATTTATTTaGCTGAGAACATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMAHSFI*LRTLRR
Trigger: CCTTCTTAATGTTCTCAGTCAAATAAATGAGTGAGC...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGGCTCACTCATTTATTTaGCTGAGAACATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKAHSFI*LRTLRR
Trigger: CCTTCTTAATGTTCTCAGTCAAATAAATGAGTGAGC...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGAAGGAATCAAATTCATaGAGACCTTTTCCTATAAGG +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQKESNS*RPFPIR
Trigger: CCTTATAGGAAAAGGTCTGCATGAATTTGATTCCTT...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289153.6
ENST00000477593.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTTGGGATGGATGGTTCATaGTCTGGTGGATATGTTTGT +
Preference number: 4 (lower is better)
Translates to: YLVIVYQPQRLHFGIHVFGMDGS*SGGYVC
Trigger: ACAAACATATCCACCAGAGCATGAACCATCCATCCC...AAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR GCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCATGCCAAAATAGAAACTaGCCTATCCTCCGATTACCA +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISCQNRN*PILRLP
Trigger: TGGTAATCGGAGGATAGGGCAGTTTCTATTTTGGCA...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYTSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRITSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTGAGTGCTTCAACCTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISLSAST*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGGTTGAAGCACTCAA...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGATGAAGAGATTCCCATaGCGTCGTAAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKMKRFP*RRKIRY
Trigger: ATATCTGATTTTACGACGGCATGGGAATCTCTTCAT...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTCTTAAACTGTTTGAGTaGTTCTTCTTCACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFLKLFE*FFFTLP
Trigger: GGGAAGAGTGAAGAAGAAGCACTCAAACAGTTTAAG...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SFPYHRGLRAPNILWRISASSNF*LNCLSA
Trigger: AGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGC...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SLRYCISLTDVSSGSPAVASSNF*LNCLSA
Trigger: AGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGC...GACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp ATGTGCACTTCTGACCTAAGATGCCAAAATAGAAACTGCCCTATCCTCCGATTATTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: MCTSDLRCQNRNCPILRLLGSVG*LVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA...TAATCGGAGGATAGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGTGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGTTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQLGSVG*LVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAGCTTGCAATCTCAGCTaGCTTTTCAATAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISACNLS*LFNNQE
Trigger: TTCCTGATTATTGAAAAGGCAGCTGAGATTGCAAGC...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469284.6
ENST00000544716.5
CDS-3UTR CCA 90 bp CGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTTAAAAGGAAATCCACAGGTATaGAGCCATCAGATGCTATCT +
Preference number: 4 (lower is better)
Translates to: RNIWSVNISCRKSSPFLKGNPQV*SHQMLS
Trigger: AGATAGCATCTGATGGCTCCATACCTGTGGATTTCC...TTTTAAAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR CCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGAAGGAGGTTGAACATTaGGTAATTGTGAACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKKEVEH*VIVNLL
Trigger: AAGCAAGTTCACAATTACCCAATGTTCAACCTCCTT...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTCTAAGTTTTCAGGGATaGATGGTTCATGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: IPCYCIPATKASFWNPCILSFQG*MVHALV
Trigger: CACCAGAGCATGAACCATCCATCCCTGAAAACTTAG...AATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR CCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCTTGAACAGTTCCCATTaGATTCAACATTTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFLNSSH*IQHFFE
Trigger: CTCGAAGAAATGTTGAATCCAATGGGAACTGTTCAA...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR CCA 90 bp ATGTGCACTTCTGACCTAAGATGCCAAAATAGAAACTGCCCTATCCTCCGATTAACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: MCTSDLRCQNRNCPILRLTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...TAATCGGAGGATAGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGTGCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CCA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAGTGTGGAAAAGTTGTTaGCTGAGTGACAATACTTGG +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQVWKSC*LSDNTW
Trigger: CCAAGTATTGTCACTCAGCCAACAACTTTTCCACAC...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAACATTATAGAAGCAGCTaGAAGAACTGGATCACACAG +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQHYRSS*KNWITQ
Trigger: CTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATG...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCTTAAAGATTTCCGTGTaGCGTGAAACCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: SFPYHRGLRAPNILWRISLKISV*RETISI
Trigger: AATTGAAATGGTTTCACGCCACACGGAAATCTTTAA...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCAGCTTTCCTGATGGTCTaGTATTTAGAGGGATTAATA +
Preference number: 4 (lower is better)
Translates to: KSIKRNIWSVNISCRKSSAFLMV*YLEGLI
Trigger: TATTAATCCCTCTAAATATCAGACCATCAGGAAAGC...TGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp AAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCAGTATATGGATTTGTTTaGACAGTTCCCATTGGATTC +
Preference number: 4 (lower is better)
Translates to: KSIKRNIWSVNISCRKSSVYGFV*TVPIGF
Trigger: GAATCCAATGGGAACTGTTCAAACAAATCCATATAC...TGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR TCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISSMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: YHRGLRAPNILWRISSSFKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: LNPHQIPCYCIPATKASFKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...AAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp AATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: NPHQIPCYCIPATKASFWKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...CCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR TCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAAAAAATCACTCCAACTaGATCCTCACCAAATACCTT +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISKNHSN*ILTKYL
Trigger: AAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTT...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTCCTGTTTTTCCTTGTTaGATGACATGGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIPVFPC*MTWMKS
Trigger: TGATTTCATCCATGTCATTCAACAAGGAAAAACAGG...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCCTGTTTTTCCTTGTTaGATGACATGGATGAAATCA +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYPVFPC*MTWMKS
Trigger: TGATTTCATCCATGTCATTCAACAAGGAAAAACAGG...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp AATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATCATATCACCGAGGATTaGGAGCTCCCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: NTLLLYTSHKGFILESMYHITED*ELPIFF
Trigger: AAAGAATATTGGGAGCTCTCAATCCTCGGTGATATG...ATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQTSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTGTTTTAAACAGGTATaGATGGCCTCCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NTLLLYTSHKGFILESMYCFKQV*MASFPL
Trigger: CAAAGGGAAGGAGGCCATGCATACCTGTTTAAAACA...ATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR GCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFASSNF*LNCLSA
Trigger: AGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGC...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGAAAGATACAATTTGGTaGCCATATGGGAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKKDTIW*PYGKNS
Trigger: ACTGTTTTTCCCATATGGGCACCAAATTGTATCTTT...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAAAGGAGGTTGAACATTaGGTAATTGTGAACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISKEVEH*VIVNLL
Trigger: AAGCAAGTTCACAATTACCCAATGTTCAACCTCCTT...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATTGAACAGTTCCCATTaGATTCAACATTTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: SKSIKRNIWSVNISCRKSLNSSH*IQHFFE
Trigger: CTCGAAGAAATGTTGAATCCAATGGGAACTGTTCAA...TGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR CCA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATTGAACAGTTCCCATTaGATTCAACATTTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: HQIPCYCIPATKASFWNPLNSSH*IQHFFE
Trigger: CTCGAAGAAATGTTGAATCCAATGGGAACTGTTCAA...TGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR CCA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGTTAAAGATTTCCGTGTaGCGTGAAACCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKLKISV*RETISI
Trigger: AATTGAAATGGTTTCACGCCACACGGAAATCTTTAA...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CAA 72 bp CAAAGTCCAAATAAGATCCATTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTCCAAGATTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: QSPNKIHFIFTQ*RQGIPVQDFFQ
Trigger: TTGAAAGAAATCTTGGACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAAATGGATCTTATTTGGACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR TCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAAAGAGGAAGATTAGATaGATTTCGATTTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQKRKIR*ISIYGS
Trigger: GCTGCCATAAATCGAAATTCATCTAATCTTCCTCTT...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAAAGAGGAAGATTAGATaGATTTCGATTTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISKRKIR*ISIYGS
Trigger: GCTGCCATAAATCGAAATTCATCTAATCTTCCTCTT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAGCTTTCCTGATGGTCTaGTATTTAGAGGGATTAATA +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISAFLMV*YLEGLI
Trigger: TATTAATCCCTCTAAATATCAGACCATCAGGAAAGC...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAGCTTTCCTGATGGTCTaGTATTTAGAGGGATTAATA +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQAFLMV*YLEGLI
Trigger: TATTAATCCCTCTAAATATCAGACCATCAGGAAAGC...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000493568.5
ENST00000674063.1
CDS-3UTR TCA 90 bp TACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTTAGTATGCTTCAAGGATaGCACCAAATTGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: YLVIVYQPQRLHFGIHVFSMLQG*HQIVLR
Trigger: TCTCAGTACAATTTGGTGTCATCCTTGAAGCATACT...AAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR GCA 90 bp ATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATTACTTCTGACCTAAGATaGCAAAATAGAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: IPCYCIPATKASFWNPCITSDLR*QNRNCP
Trigger: AGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGT...AATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISASSNF*LNCLSA
Trigger: AGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGC...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTGCCTCATCAAATTTTTaGTTAAACTGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIASSNF*LNCLSA
Trigger: AGCACTCAAACAGTTTAAGCAAAAATTTGATGAGGC...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRILGSVG*LVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTAGGTTCTGTGGGATaGCTTGTTCTTAATTTAACT +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISLGSVG*LVLNLT
Trigger: AGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR GCA 90 bp AATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGTGGAATCCATGTATTTaGACTTTTCAACACTGCTTA +
Preference number: 4 (lower is better)
Translates to: NPHQIPCYCIPATKASFWWNPCI*TFQHCL
Trigger: TAAGCAGTGTTGAAAAGTGCAAATACATGGATTCCA...CCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473435.1
CDS-3UTR CCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAAAGGAGGTTGAACATTaGGTAATTGTGAACTTGCTT +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISKEVEH*VIVNLL
Trigger: AAGCAAGTTCACAATTACCCAATGTTCAACCTCCTT...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCATTATGGCAGCCTCTATaGCAATCATTTCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: YGTSTNNLKISVWRETISLWQPL*QSFLVH
Trigger: ATGAACAAGAAATGATTGCCATAGAGGCTGCCATAA...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAATTATGGCAGCCTCTATaGCAATCATTTCTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQLWQPL*QSFLVH
Trigger: ATGAACAAGAAATGATTGCCATAGAGGCTGCCATAA...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCAACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: SKSIKRNIWSVNISCRKSTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...TGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR CCA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CCA 90 bp AATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATATCAAGCGCAACATTTaGAGTGTCAACATATCCTGT +
Preference number: 4 (lower is better)
Translates to: NTLLLYTSHKGFILESMYIKRNI*SVNISC
Trigger: ACAGGATATGTTGACACTCCAAATGTTGCGCTTGAT...ATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CCA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTTAAAGATTTCCGTGTaGCGTGAAACCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYLKISV*RETISI
Trigger: AATTGAAATGGTTTCACGCCACACGGAAATCTTTAA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR TCA 90 bp CGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTTAAAAAAGAGGAAGATTAGATaGATTTCGATTTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: RNIWSVNISCRKSSPFLKKRKIR*ISIYGS
Trigger: GCTGCCATAAATCGAAATTCATCTAATCTTCCTCTT...TTTTAAAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR TCA 90 bp TTAAAAATCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCGTATATGGATTTGTTTaGACAGTTCCCATTGGATTC +
Preference number: 4 (lower is better)
Translates to: LKITPTESSPNTLLLYTSVYGFV*TVPIGF
Trigger: GAATCCAATGGGAACTGTTCAAACAAATCCATATAC...GCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR GCA 90 bp CGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTTAAAATGCACTTTTCAACACTaGTTAGAAAGCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: RNIWSVNISCRKSSPFLKCTFQH*LESTFM
Trigger: CATGAAAGTGCTTTCTAAGCAGTGTTGAAAAGTGCA...TTTTAAAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473435.1
CDS-3UTR CCA 90 bp CCTAATGCAAGAGAGTCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAACAAAGGCTTCATTTTaGAATCCATGTATTTGCACT +
Preference number: 4 (lower is better)
Translates to: PNARESLRYCISLTDVSSTKASF*NPCICT
Trigger: AGTGCAAATACATGGATTCCAAAATGAAGCCTTTGT...TGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGACTCTCTTGCATTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
3UTR CAA 72 bp TTAAAAATCACTCCAACTGAATCCTCACCAAATACCTaGTTATTGTATACCAGCCACAAAGGCTTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LKITPTESSPNT*LLYTSHKGFIL
Trigger: CAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGATTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS GCA 90 bp GCAGCCCAGGCCGCCGCAACCGCTCCACTCCGGCGCCCCCATCCCTaGCTCTCTCGATCACCTCCCGCCTGCCCCGCGCAGCACTACACT +
Preference number: 5 (lower is better)
Translates to: AAQAAATAPLRRPHP*LSRSPPACPAQHYT
Trigger: AGTGTAGTGCTGCGCGGGGCAGGCGGGAGGTGATCGAGAGAGGCAGGGATGGGGGCGCCGGAGTGGAGCGGTTGCGGCGGCCTGGGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000674063.1
CDS GCA 90 bp TACACTGCCTGGCGTTCCGCCGCCGCCGCCTGCTACTATTCCAAGTaGGCAGTCAGCAGCCCAGGCCGCCGCAACCGCTCCACTCCGGCG +
Preference number: 5 (lower is better)
Translates to: YTAWRSAAAACYYSK*AVSSPGRRNRSTPA
Trigger: CGCCGGAGTGGAGCGGTTGCGGCGGCCTGGGCTGCTGACTGCGCACTTGGAATAGTAGCAGGCGGCGGCGGCGGAACGCCAGGCAGTGTA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483968.5
ENST00000674063.1
CDS GCA 90 bp TTTCCAGTTAAAACATACACTGCCTGGCGTTCCGCCGCCGCCGCCTaGTACTATTCCAAGTGCGCAGTCAGCAGCCCAGGCCGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: FPVKTYTAWRSAAAA*YYSKCAVSSPGRRN
Trigger: GTTGCGGCGGCCTGGGCTGCTGACTGCGCACTTGGAATAGTAGCAGGCGGCGGCGGCGGAACGCCAGGCAGTGTATGTTTTAACTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483968.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGCAGAGCGATCTCCTGTaGCTAAACAGCCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLQSDLL*LNSHKA
Trigger: TGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTG...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp CTCAGGCTCCCACCAAAGTCCAGGGGGCCTCCTATACCATGCCTGATGAGGCTGAGCCTATTCCTGAGGTaGGTTTGTCTACTGACTTGG +
Preference number: 5 (lower is better)
Translates to: LRLPPKSRGPPIPCLMRLSLFLR*VCLLTW
Trigger: CCAAGTCAGTAGACAAACCAACCTCAGGAATAGGCT...CAGCCTCATCAGGCATGGTATAGGAGGCCCCCTGGACTTTGGTGGGAGCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GAACTGGACTGCTCCAGCATCTGCCCCATGAACAAGAGCTCCAAAGCAGCAGAGATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 5 (lower is better)
Translates to: ELDCSSICPMNKSSKAAEMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...CTCTGCTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGGAGCAGTCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS TCA 90 bp GGGCAAAAGGAAATCCACAGGTATGGAGCCATCAGATGCTATCTGTaGATCCACCGCCCAGATGTCAAGGATGTCTGCCATAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GQKEIHRYGAIRCYL*IHRPDVKDVCHSRR
Trigger: CCTCCTGCTATGGCAGACATCCTTGACATCTGGGCGGTGGATTCACAGATAGCATCTGATGGCTCCATACCTGTGGATTTCCTTTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000465581.1
ENST00000477593.5
ENST00000483968.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTAGAAGGGCATCTTTGTaGAAGGCTGCTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSRRASL*KAAAAA
Trigger: GGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTCT...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCAACATCAGCGCAAAGAGACAGAGCGATCTCCTGTaGCTAAACAGCCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: SLTDVSSGSPAVNISAKRQSDLL*LNSHKA
Trigger: TGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTG...TCTCTTTGCGCTGATGTTGACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATAGAAGGGCATCTTTGTaGAAGGCTGCTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHRRASL*KAAAAA
Trigger: GGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTCT...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTTCAGAAGGGCATCTTaGTTGAAGGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCFRRAS*LKAAAA
Trigger: TGCTGCAGCAGCCTTCAACAAAGATGCCCTTCTGAA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATCAGCAGAGTCTGGCCTaGGCTCAGTGCCAAGTAACT +
Preference number: 5 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHQQSLA*AQCQVT
Trigger: AGTTACTTGGCACTGAGCCAAGGCCAGACTCTGCTG...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACCAGCAGAGTCTGGCCTaGGCTCAGTGCCAAGTAACT +
Preference number: 5 (lower is better)
Translates to: APNILWRISSSFAGCCQDQQSLA*AQCQVT
Trigger: AGTTACTTGGCACTGAGCCAAGGCCAGACTCTGCTG...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GAACTGGACTGCTCCAGCATCTGCCCCATGAACAAGAGCTCCAAAGCAGCAGAGGGAAAAACAGTTGACTaGAACTTCACTGATTTGGCA +
Preference number: 5 (lower is better)
Translates to: ELDCSSICPMNKSSKAAEGKTVD*NFTDLA
Trigger: TGCCAAATCAGTGAAGTTCAAGTCAACTGTTTTTCC...CTCTGCTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGGAGCAGTCCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS CCA 90 bp CCAACTGGATATAAATCCCAGTGGGCAAAAGGAAATCCACAGGTATaGAGCCATCAGATGCTATCTGTGAATCCACCGCCCAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: PTGYKSQWAKGNPQV*SHQMLSVNPPPRCQ
Trigger: TTGACATCTGGGCGGTGGATTCACAGATAGCATCTGATGGCTCCATACCTGTGGATTTCCTTTTGCCCACTGGGATTTATATCCAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000465581.1
ENST00000477593.5
ENST00000483968.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTACTCTCCCGCTGACTaGCAACACATAATCATAGGG +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSYSPAD*QHIIIG
Trigger: CCCTATGATTATGTGTTGCAAGTCAGCGGGAGAGTA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 5 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCAGAAGGGCATCTTTGTaGAAGGCTGCTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPRRASL*KAAAAA
Trigger: GGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTCT...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTTTCCAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCAGAAGGGCATCTTTGTaGAAGGCTGCTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSRVNPSSATFGVSTYPVRRASL*KAAAAA
Trigger: GGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTCT...GACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp GAACTGGACTGCTCCAGCATCTGCCCCATGAACAAGAGCTCCAAAGCAGCAGAGAGATACTGTATATCTTaGACTGATGTGAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: ELDCSSICPMNKSSKAAERYCIS*TDVSSG
Trigger: TCCTGAACTCACATCAGTCAAAGATATACAGTATCT...CTCTGCTGCTTTGGAGCTCTTGTTCATGGGGCAGATGCTGGAGCAGTCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAATACTCTCCCGCTGACTaGCAACACATAATCATAGGG +
Preference number: 5 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKYSPAD*QHIIIG
Trigger: CCCTATGATTATGTGTTGCAAGTCAGCGGGAGAGTA...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGCAGAGCGATCTCCTGTaGCTAAACAGCCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRQSDLL*LNSHKA
Trigger: TGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTG...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGCAGAGCGATCTCCTGTaGCTAAACAGCCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTQSDLL*LNSHKA
Trigger: TGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTG...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCAGAAGGGCATCTTaGTTGAAGGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRFRRAS*LKAAAA
Trigger: TGCTGCAGCAGCCTTCAACAAAGATGCCCTTCTGAA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCATTCAGAAGGGCATCTTaGTTGAAGGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSFRRAS*LKAAAA
Trigger: TGCTGCAGCAGCCTTCAACAAAGATGCCCTTCTGAA...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTAGGTCATCCCCAGAGTaGTATTCTTTAAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSRSSPE*YSLSQF
Trigger: GAACTGGCTTAAAGAATACAACTCTGGGGATGACCT...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTGGTTTGTCTACTGACTaGGCCATTTCTTGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLGLSTD*AISWSS
Trigger: GGAACTCCAAGAAATGGCCAAGTCAGTAGACAAACC...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGATTCCTGAGGTTGGTTaGTCTACTGACTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVIPEVG*STDLAI
Trigger: AATGGCCAAGTCAGTAGACAAACCAACCTCAGGAAT...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GCCTGGTTCATGAAATGGTGGGTGGCTACTAGACAAAGATCTCTGAACAAACCTAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: AWFMKWWVATRQRSLNKPNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...AGGTTTGTTCAGAGATCTTTGTCTAGTAGCCACCCACCATTTCATGAACCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 5 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 5 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: RGNHRGLFRLGSVGCLVLHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...AAGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAAGCTGAATGTCAGCAATaGTTTCAGAGGTGCTCACAA +
Preference number: 5 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKAECQQ*FQRCSQ
Trigger: TTGTGAGCACCTCTGAAACAATTGCTGACATTCAGC...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTAGAAGGGCATCTTTGTaGAAGGCTGCTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: YHRGLRAPNILWRISSSFRRASL*KAAAAA
Trigger: GGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTCT...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAAGAAGGGCATCTTTGTaGAAGGCTGCTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISRRASL*KAAAAA
Trigger: GGCTGCTGCAGCAGCCTTCAACAAAGATGCCCTTCT...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCTTCAGAAGGGCATCTTaGTTGAAGGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PTESSPNTLLLYTSHKGFFRRAS*LKAAAA
Trigger: TGCTGCAGCAGCCTTCAACAAAGATGCCCTTCTGAA...GAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAAGCCTATTCCTGAGGTaGGTTTGTCTACTGACTTGG +
Preference number: 5 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSSLFLR*VCLLTW
Trigger: CCAAGTCAGTAGACAAACCAACCTCAGGAATAGGCT...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTCTTACTTTCTGGGTTaGAATACTGGCTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSSYFLG*NTGSIN
Trigger: GTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp TCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCTACTCTCCCGCTGACTaGCAACACATAATCATAGGG +
Preference number: 5 (lower is better)
Translates to: SLRYCISLTDVSSGSPAVYSPAD*QHIIIG
Trigger: CCCTATGATTATGTGTTGCAAGTCAGCGGGAGAGTA...GACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462898.5
CDS-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCAAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAAATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 5 (lower is better)
Translates to: QSKSIKRNIWSVNISCRKMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...TTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp GCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGCACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: AFLFSFIWTVRTATNPQVHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...CACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTCACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAATCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGCAGAGCGATCTCCTGTaGCTAAACAGCCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKQSDLL*LNSHKA
Trigger: TGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTG...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGGCTGAATGTCAGCAATaGTTTCAGAGGTGCTCACAA +
Preference number: 5 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWAECQQ*FQRCSQ
Trigger: TTGTGAGCACCTCTGAAACAATTGCTGACATTCAGC...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGAGGTCATCCCCAGAGTaGTATTCTTTAAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWRSSPE*YSLSQF
Trigger: GAACTGGCTTAAAGAATACAACTCTGGGGATGACCT...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTTTTTTGACCATGATGTaGTCACTATGTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSFLTMM*SLCLSP
Trigger: TGGTGACAGACATAGTGACAACATCATGGTCAAAAA...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAAAGATACTGTATATCTTaGACTGATGTGAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQRYCIS*TDVSSG
Trigger: TCCTGAACTCACATCAGTCAAAGATATACAGTATCT...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGCCATATCACCGAGGATaGAGAGCTCCCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRPYHRG*RAPNIL
Trigger: AAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TGCCAAGTTCCAAAGGCCCAGTCTACCCATAAAGAAGAGGCTCACCCATTCCAATTGAACTTCACTGATTaGGCATGTATTTATCAAGGC +
Preference number: 5 (lower is better)
Translates to: CQVPKAQSTHKEEAHPFQLNFTD*ACIYQG
Trigger: GCCTTGATAAATACATGCCAAATCAGTGAAGTTCAA...TTGGAATGGGTGAGCCTCTTCTTTATGGGTAGACTGGGCCTTTGGAACTTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS CCA 90 bp TCTCCCAGATCCAAATATATCTCAGCTAAGAAATGCTGGTCCACCTaGTCAGATAAGAAAATGTTAGAAGTGTTCAGCCTTGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: SPRSKYISAKKCWST*SDKKMLEVFSLGTR
Trigger: CCTTGTGCCAAGGCTGAACACTTCTAACATTTTCTTATCTGACCAGGTGGACCAGCATTTCTTAGCTGAGATATATTTGGATCTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487552.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTGTCTCCAGTTCTCAATaGTCCTTTAAAGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCVSSSQ*SFKVKN
Trigger: GTTTTTGACTTTAAAGGACAATTGAGAACTGGAGAC...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTGTCTCCAGTTCTCAATaGTCCTTTAAAGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSVSSSQ*SFKVKN
Trigger: GTTTTTGACTTTAAAGGACAATTGAGAACTGGAGAC...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATGTGCACTTCTGACCTAAGATGCCAAAATAGAAACTGCCCTATCCTCCGATTAAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: MCTSDLRCQNRNCPILRLNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...TAATCGGAGGATAGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAATGGCCTCCTTCCCTTaGGCTCTGTTTAACTTCACG +
Preference number: 5 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISMASFP*ALFNFT
Trigger: CGTGAAGTTAAACAGAGCCAAAGGGAAGGAGGCCAT...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GTAGTTTTGCTGGATGTTGCCAGGACTCAGAGAGATCACCCATTTACACATTCACCAAATACCTTGTTATaGTATACCAGCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: VVLLDVARTQRDHPFTHSPNTLL*YTSHKG
Trigger: GCCTTTGTGGCTGGTATACAATAACAAGGTATTTGG...TGAATGTGTAAATGGGTGATCTCTCTGAGTCCTGGCAACATCCAGCAAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGGATGACACCAAATTGTACTGAGACAGCAGGAATGTGCACTTCTGACCTAAGACCAAATACCTTGTTATaGTATACCAGCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: RMTPNCTETAGMCTSDLRPNTLL*YTSHKG
Trigger: GCCTTTGTGGCTGGTATACAATAACAAGGTATTTGG...TCTTAGGTCAGAAGTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGCCAAATACCTTGTTATaGTATACCAGCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWPNTLL*YTSHKG
Trigger: GCCTTTGTGGCTGGTATACAATAACAAGGTATTTGG...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCCAAATACCTTGTTATaGTATACCAGCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWPNTLL*YTSHKG
Trigger: GCCTTTGTGGCTGGTATACAATAACAAGGTATTTGG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTGCTGGATGTTGCCAGGACTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: APNILWRISSSFAGCCQDSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...GTCCTGGCAACATCCAGCAAAACTACTGCTTATTCTCCAAAGAATATTGGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TCCTTAAGATACTGTATATCTTTGACTGATGTGAGTTCAGGAAGCCCTGCAGTCCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: SLRYCISLTDVSSGSPAVHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...GACTGCAGGGCTTCCTGAACTCACATCAGTCAAAGATATACAGTATCTTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp CCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: PTESSPNTLLLYTSHKGFHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...GAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGCAGAGCGATCTCCTGTaGCTAAACAGCCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: ESSPNTLLLYTSHKGFILQSDLL*LNSHKA
Trigger: TGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTG...CAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCAGAGCGATCTCCTGTaGCTAAACAGCCATAAGGCA +
Preference number: 5 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYQSDLL*LNSHKA
Trigger: TGCCTTATGGCTGTTTAGCAACAGGAGATCGCTCTG...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGCTGAATGTCAGCAATaGTTTCAGAGGTGCTCACAA +
Preference number: 5 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCAECQQ*FQRCSQ
Trigger: TTGTGAGCACCTCTGAAACAATTGCTGACATTCAGC...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GCTTCTTACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGCTGAATGTCAGCAATaGTTTCAGAGGTGCTCACAA +
Preference number: 5 (lower is better)
Translates to: ASYFLGLNTGSINYSVTMAECQQ*FQRCSQ
Trigger: TTGTGAGCACCTCTGAAACAATTGCTGACATTCAGC...CATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACTTCAGAAGGGCATCTTaGTTGAAGGCTGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYFRRAS*LKAAAA
Trigger: TGCTGCAGCAGCCTTCAACAAAGATGCCCTTCTGAA...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATGTGCACTTCTGACCTAAGATGCCAAAATAGAAACTGCCCTATCCTCCGATTAAGGTCATCCCCAGAGTaGTATTCTTTAAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: MCTSDLRCQNRNCPILRLRSSPE*YSLSQF
Trigger: GAACTGGCTTAAAGAATACAACTCTGGGGATGACCT...TAATCGGAGGATAGGGCAGTTTCTATTTTGGCATCTTAGGTCAGAAGTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTAGGTCATCCCCAGAGTaGTATTCTTTAAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCRSSPE*YSLSQF
Trigger: GAACTGGCTTAAAGAATACAACTCTGGGGATGACCT...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTCTAGATACTGTATATCTTaGACTGATGTGAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: QRESSGIVQIRFCGMPCSRYCIS*TDVSSG
Trigger: TCCTGAACTCACATCAGTCAAAGATATACAGTATCT...AGAACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTAGATACTGTATATCTTaGACTGATGTGAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCRYCIS*TDVSSG
Trigger: TCCTGAACTCACATCAGTCAAAGATATACAGTATCT...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTGGGATGCCTTGTTTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: KQRESSGIVQIRFCGMPCFCLNC*SASSSL
Trigger: GAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAA...ACAAGGCATCCCACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCCAGGTGTGGAAATGTTCATACATTTTCTaGATCTTGCAGCATTCCACA +
Preference number: 5 (lower is better)
Translates to: LFSFIWTVRTATNPQVWKCSYIF*ILQHST
Trigger: TGTGGAATGCTGCAAGATCAAGAAAATGTATGAACA...TTTCCACACCTGGGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGCACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGGCTGAATGTCAGCAATaGTTTCAGAGGTGCTCACAA +
Preference number: 5 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMAECQQ*FQRCSQ
Trigger: TTGTGAGCACCTCTGAAACAATTGCTGACATTCAGC...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TCACTCCAACTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTGAATGTCAGCAATaGTTTCAGAGGTGCTCACAA +
Preference number: 5 (lower is better)
Translates to: SLQLNPHQIPCYCIPATKAECQQ*FQRCSQ
Trigger: TTGTGAGCACCTCTGAAACAATTGCTGACATTCAGC...CTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAGTTGGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGAGGTCATCCCCAGAGTaGTATTCTTTAAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMRSSPE*YSLSQF
Trigger: GAACTGGCTTAAAGAATACAACTCTGGGGATGACCT...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTCAGGTCATCCCCAGAGTaGTATTCTTTAAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GSVGCLVLNLTLSSRISFRSSPE*YSLSQF
Trigger: GAACTGGCTTAAAGAATACAACTCTGGGGATGACCT...GAATGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTTTTTGACCATGATGTaGTCACTATGTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHFLTMM*SLCLSP
Trigger: TGGTGACAGACATAGTGACAACATCATGGTCAAAAA...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTTGCCTCACCAGTAGATTTTCAGCAAGTCTGGCTGGAATGATGCTATCATGGTTTTTGACCATGATGTaGTCACTATGTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: ICLTSRFSASLAGMMLSWFLTMM*SLCLSP
Trigger: TGGTGACAGACATAGTGACAACATCATGGTCAAAAA...CCATGATAGCATCATTCCAGCCAGACTTGCTGAAAATCTACTGGTGAGGCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LNPHQIPCYCIPATKASFGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...AAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACGGGAATCATCGGGGATaGTTCAGATTAGGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYGNHRG*FRLGSV
Trigger: CACAGAACCTAATCTGAACAATCCCCGATGATTCCC...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGCCATATCACCGAGGATaGAGAGCTCCCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMPYHRG*RAPNIL
Trigger: AAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCAGGTTTGTCTACTGACTaGGCCATTTCTTGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISGLSTD*AISWSS
Trigger: GGAACTCCAAGAAATGGCCAAGTCAGTAGACAAACC...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp TACTTTCTGGGTTTGAATACTGGCTCCATCAACTACTCTGTGACTATGGTCACGCAGGAAAGATACAATTaGGTGCCCATATGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: YFLGLNTGSINYSVTMVTQERYN*VPIWEK
Trigger: TTTTTCCCATATGGGCACCAAATTGTATCTTTCCTG...CGTGACCATAGTCACAGAGTAGTTGATGGAGCCAGTATTCAAACCCAGAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTCTTACTTTCTGGGTTaGAATACTGGCTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCSYFLG*NTGSIN
Trigger: GTTGATGGAGCCAGTATTCAAACCCAGAAAGTAAGA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGCTTCTTGTCACTAATTaGAGAACTGGAAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWLLVTN*RTGRKG
Trigger: ACCTTTTCTTCCAGTTCTCAAATTAGTGACAAGAAG...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAATACTCTCCCGCTGACTaGCAACACATAATCATAGGG +
Preference number: 5 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQYSPAD*QHIIIG
Trigger: CCCTATGATTATGTGTTGCAAGTCAGCGGGAGAGTA...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATGTCTCCAGTTCTCAATaGTCCTTTAAAGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: QSLVAFLGVQSQQEMIIHVSSSQ*SFKVKN
Trigger: GTTTTTGACTTTAAAGGACAATTGAGAACTGGAGAC...ATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAATGCTACTAGGGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGTTCATTTTCACACAGTaGAGACAAGGGATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: ESSPNTLLLYTSHKGFILFIFTQ*RQGIPV
Trigger: GACAGGGATCCCTTGTCTCAACTGTGTGAAAATGAA...CAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp CTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: LNPHQIPCYCIPATKASFNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...AAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACAATCTCTCGGCAGTCTaGTCGCAAAGTCCAAATAAG +
Preference number: 5 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYNLSAV*SQSPNK
Trigger: CTTATTTGGACTTTGCGACAAGACTGCCGAGAGATT...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCCAAATACCTTGTTATaGTATACCAGCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCPNTLL*YTSHKG
Trigger: GCCTTTGTGGCTGGTATACAATAACAAGGTATTTGG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTCATCAAGCGCAACATTaGGAGTGTCAACATATCCTG +
Preference number: 5 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIHQAQH*ECQHIL
Trigger: CAGGATATGTTGACACTCCAAATGTTGCGCTTGATG...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCTTTTTGACCATGATGTaGTCACTATGTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: SFPYHRGLRAPNILWRISFLTMM*SLCLSP
Trigger: TGGTGACAGACATAGTGACAACATCATGGTCAAAAA...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGGATGACACCAAATTGTACTGAGACAGCAGGAATGTGCACTTCTGACCTAAGAAGATACTGTATATCTTaGACTGATGTGAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: RMTPNCTETAGMCTSDLRRYCIS*TDVSSG
Trigger: TCCTGAACTCACATCAGTCAAAGATATACAGTATCT...TCTTAGGTCAGAAGTGCACATTCCTGCTGTCTCAGTACAATTTGGTGTCATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp ACTCAGTTCTCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGTTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: TQFSFPYHRGLRAPNILWFCLNC*SASSSL
Trigger: GAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAA...CCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGAGAACTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: VLEAFKKQRESSGIVQIRFCLNC*SASSSL
Trigger: GAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAA...CCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATATCACCGAGGATaGAGAGCTCCCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: PHQIPCYCIPATKASFWNPYHRG*RAPNIL
Trigger: AAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG...ATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCACCATATCACCGAGGATaGAGAGCTCCCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISPYHRG*RAPNIL
Trigger: AAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCCATATCACCGAGGATaGAGAGCTCCCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYPYHRG*RAPNIL
Trigger: AAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTATTCCTGAGGTTGGTTaGTCTACTGACTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: YHRGLRAPNILWRISSSFIPEVG*STDLAI
Trigger: AATGGCCAAGTCAGTAGACAAACCAACCTCAGGAAT...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTCTTCTTGTCACTAATTaGAGAACTGGAAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCLLVTN*RTGRKG
Trigger: ACCTTTTCTTCCAGTTCTCAAATTAGTGACAAGAAG...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AAAGATGCCTTTCTTTTTAGCTTCATTTGGACAGTAAGAACAGCCACCAACCCCTGTTCATACATTTTCTaGATCTTGCAGCATTCCACA +
Preference number: 5 (lower is better)
Translates to: KDAFLFSFIWTVRTATNPCSYIF*ILQHST
Trigger: TGTGGAATGCTGCAAGATCAAGAAAATGTATGAACA...GGGGTTGGTGGCTGTTCTTACTGTCCAAATGAAGCTAAAAAGAAAGGCATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TCTTTCCCATATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCTGTTCATACATTTTCTaGATCTTGCAGCATTCCACA +
Preference number: 5 (lower is better)
Translates to: SFPYHRGLRAPNILWRISCSYIF*ILQHST
Trigger: TGTGGAATGCTGCAAGATCAAGAAAATGTATGAACA...GCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATATGGGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AACAAACAAAAACGGAAACAATCCCTAGTAGCATTCCTTGGCGTGCAAAGTCAGGTCTCCAGTTCTCAATaGTCCTTTAAAGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: NKQKRKQSLVAFLGVQSQVSSSQ*SFKVKN
Trigger: GTTTTTGACTTTAAAGGACAATTGAGAACTGGAGAC...CTGACTTTGCACGCCAAGGAATGCTACTAGGGATTGTTTCCGTTTTTGTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGCCAAATACCTTGTTATaGTATACCAGCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: ESSPNTLLLYTSHKGFILPNTLL*YTSHKG
Trigger: GCCTTTGTGGCTGGTATACAATAACAAGGTATTTGG...CAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp GAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: ESSPNTLLLYTSHKGFILSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...CAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp TCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTTCCTCACCAAATACCTaGTTATTGTATACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: SSATFGVSTYPVVNHHHFSSPNT*LLYTSH
Trigger: GTGGCTGGTATACAATAACAAGGTATTTGGTGAGGA...AAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR CAA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCAGCTGAATGTCAGCAATaGTTTCAGAGGTGCTCACAA +
Preference number: 5 (lower is better)
Translates to: YGTSTNNLKISVWRETISAECQQ*FQRCSQ
Trigger: TTGTGAGCACCTCTGAAACAATTGCTGACATTCAGC...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp GAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTTCAGATTAGGTTCTGTTTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: EAFKKQRESSGIVQIRFCFCLNC*SASSSL
Trigger: GAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAA...ACAGAACCTAATCTGAACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAACCATATCACCGAGGATaGAGAGCTCCCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQPYHRG*RAPNIL
Trigger: AAGAATATTGGGAGCTCTCAATCCTCGGTGATATGG...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTCATGATAAGTCTTGGAAGCATTCAAAAAGCAGAGGGAATCATCGGGGATTGTCAGGAAAGATACAATTaGGTGCCCATATGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: FMISLGSIQKAEGIIGDCQERYN*VPIWEK
Trigger: TTTTTCCCATATGGGCACCAAATTGTATCTTTCCTG...ACAATCCCCGATGATTCCCTCTGCTTTTTGAATGCTTCCAAGACTTATCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGTTTTCCTCGCTGAATTaGCGCATTTTTCTTCGAAAT +
Preference number: 5 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKFSSLN*RIFLRN
Trigger: ATTTCGAAGAAAAATGCGCAAATTCAGCGAGGAAAA...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCACACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTGAATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTCACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: LNPHQIPCYCIPATKASFHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...AAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp AATCCTCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGCACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: NPHQIPCYCIPATKASFWHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...CCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp AGTAAATCCATCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCACACAAAGGCTTCATTTaGGAATCCATGTATTTGCAC +
Preference number: 5 (lower is better)
Translates to: SKSIKRNIWSVNISCRKSHKGFI*ESMYLH
Trigger: GTGCAAATACATGGATTCCAAAATGAAGCCTTTGTG...TGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGATGGATTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000473435.1
CDS-3UTR CAA 90 bp ACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATCCAAATACCTTGTTATaGTATACCAGCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: TKYLVIVYQPQRLHFGIHPNTLL*YTSHKG
Trigger: GCCTTTGTGGCTGGTATACAATAACAAGGTATTTGG...ATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000469284.6
ENST00000473435.1
CDS-3UTR CAA 90 bp TTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTCATTTTTGACCATGATGTaGTCACTATGTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: LGSVGCLVLNLTLSSRISFLTMM*SLCLSP
Trigger: TGGTGACAGACATAGTGACAACATCATGGTCAAAAA...TGAAATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTCCTTGGCGTGCAAAGTCAGCAGGAAATGATTATCCATTGACAGTTTTCATGAGATACTGTATATCTTaGACTGATGTGAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: IPWRAKSAGNDYPLTVFMRYCIS*TDVSSG
Trigger: TCCTGAACTCACATCAGTCAAAGATATACAGTATCT...CATGAAAACTGTCAATGGATAATCATTTCCTGCTGACTTTGCACGCCAAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACCTAACTGAAAAGTTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: LIIEAAGRTGSHSYLTEKFCLNC*SASSSL
Trigger: GAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAA...CTTTTCAGTTAGGTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp ATTAATATGTGCCTCATTATAGAAGCAGCTGGAAGAACTGGATCACACAGTTACGGAAAAACAGTTGACTaGAACTTCACTGATTTGGCA +
Preference number: 5 (lower is better)
Translates to: INMCLIIEAAGRTGSHSYGKTVD*NFTDLA
Trigger: TGCCAAATCAGTGAAGTTCAAGTCAACTGTTTTTCC...GTAACTGTGTGATCCAGTTCTTCCAGCTGCTTCTATAATGAGGCACATATTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS TCA 90 bp AAATTTGCCCTGAATTCTAGTTCCCTTACTGTACTCCATACACAATaGCAGCAGATGTCTTTTCAGCATCTTCCTATCAACTGTCTTAAT +
Preference number: 5 (lower is better)
Translates to: KFALNSSSLTVLHTQ*QQMSFQHLPINCLN
Trigger: ATTAAGACAGTTGATAGGAAGATGCTGAAAAGACATCTGCTGTCATTGTGTATGGAGTACAGTAAGGGAACTAGAATTCAGGGCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487552.1
CDS CCA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTaGAATCCATGTATTTGCACTTTTCAACACTGCTTAGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: HQIPCYCIPATKASF*NPCICTFQHCLEST
Trigger: AGTGCTTTCTAAGCAGTGTTGAAAAGTGCAAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473435.1
CDS-3UTR CAA 90 bp TATCACCGAGGATTGAGAGCTCCCAATATTCTTTGGAGAATAAGCAGTAGTTTTCTTCTTGTCACTAATTaGAGAACTGGAAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: YHRGLRAPNILWRISSSFLLVTN*RTGRKG
Trigger: ACCTTTTCTTCCAGTTCTCAAATTAGTGACAAGAAG...AAAACTACTGCTTATTCTCCAAAGAATATTGGGAGCTCTCAATCCTCGGTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTCTTCTTGTCACTAATTaGAGAACTGGAAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRILLVTN*RTGRKG
Trigger: ACCTTTTCTTCCAGTTCTCAAATTAGTGACAAGAAG...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTTGTTCATACATTTTCTaGATCTTGCAGCATTCCACA +
Preference number: 5 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRICSYIF*ILQHST
Trigger: TGTGGAATGCTGCAAGATCAAGAAAATGTATGAACA...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000477593.5
ENST00000674063.1
CDS-3UTR CAA 90 bp AGATTAGGTTCTGTGGGATGCCTTGTTCTTAATTTAACTCTGAGTTCCAGGATTGTCTCCAGTTCTCAATaGTCCTTTAAAGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: RLGSVGCLVLNLTLSSRIVSSSQ*SFKVKN
Trigger: GTTTTTGACTTTAAAGGACAATTGAGAACTGGAGAC...AATCCTGGAACTCAGAGTTAAATTAAGAACAAGGCATCCCACAGAACCTAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAATTTTTGACCATGATGTaGTCACTATGTCTGTCACCA +
Preference number: 5 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQFLTMM*SLCLSP
Trigger: TGGTGACAGACATAGTGACAACATCATGGTCAAAAA...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp CACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATTTTGCTTAAACTGTTaGAGTGCTTCTTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: HQIPCYCIPATKASFWNPFCLNC*SASSSL
Trigger: GAGTGAAGAAGAAGCACTCAAACAGTTTAAGCAAAA...TGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS-3UTR CAA 90 bp TCAAGCGCAACATTTGGAGTGTCAACATATCCTGTCGTAAATCATCACCATTTTTTGGAATCCATGTATTaGCACTTTTCAACACTGCTT +
Preference number: 5 (lower is better)
Translates to: SSATFGVSTYPVVNHHHFLESMY*HFSTLL
Trigger: AAGCAGTGTTGAAAAGTGCAAATACATGGATTCCAA...AAAATGGTGATGATTTACGACAGGATATGTTGACACTCCAAATGTTGCGCTTGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473435.1
CDS-3UTR CAA 90 bp CATTCCCTTTATAACATCTCTAACAGGGTCATGTTCAATTTAGTGCAAGTGCAAAGATACTGTATATCTTaGACTGATGTGAGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: HSLYNISNRVMFNLVQVQRYCIS*TDVSSG
Trigger: TCCTGAACTCACATCAGTCAAAGATATACAGTATCT...TTGCACTTGCACTAAATTGAACATGACCCTGTTAGAGATGTTATAAAGGGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000469284.6
ENST00000477593.5
ENST00000493568.5
ENST00000544716.5
ENST00000674063.1
CDS-3UTR CAA 90 bp TATGGTACCTCAACAAATAACTTAAAGATTTCCGTGTGGCGTGAAACCATTTCATTGAACTTCACTGATTaGGCATGTATTTATCAAGGC +
Preference number: 5 (lower is better)
Translates to: YGTSTNNLKISVWRETISLNFTD*ACIYQG
Trigger: GCCTTGATAAATACATGCCAAATCAGTGAAGTTCAA...TGAAATGGTTTCACGCCACACGGAAATCTTTAAGTTATTTGTTGAGGTACCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289153.6
ENST00000674063.1
CDS-3UTR CAA 90 bp AATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTGGAATCCATGTATGTCTCCAGTTCTCAATaGTCCTTTAAAGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: NTLLLYTSHKGFILESMYVSSSQ*SFKVKN
Trigger: GTTTTTGACTTTAAAGGACAATTGAGAACTGGAGAC...ATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462898.5
ENST00000469284.6
CDS GCA 72 bp TGGCGTTCCGCCGCCGCCGCCTGCTACTATTCCAAGTaGGCAGTCAGCAGCCCAGGCCGCCGCAACCGCTCC +
Preference number: 6 (lower is better)
Translates to: WRSAAAACYYSK*AVSSPGRRNRS
Trigger: GGAGCGGTTGCGGCGGCCTGGGCTGCTGACTGCGCACTTGGAATAGTAGCAGGCGGCGGCGGCGGAACGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462898.5
ENST00000483968.5
ENST00000674063.1
CDS CAA 90 bp GGGCCCTTGCCTGGCAAGATCCTCAGTCTTGTATCATTCTTCTGTTaGAGCATCAAAGCAAGAGATCAAAGGCTAAGAATGGTCGCCCCC +
Preference number: 6 (lower is better)
Translates to: GPLPGKILSLVSFFC*SIKARDQRLRMVAP
Trigger: GGGGGCGACCATTCTTAGCCTTTGATCTCTTGCTTTGATGCTCAAACAGAAGAATGATACAAGACTGAGGATCTTGCCAGGCAAGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483968.5
CDS CCA 72 bp CTTCCCGAGGTACCTCCAACTGGATATAAATCCCAGTaGGCAAAAGGAAATCCACAGGTATGGAGCCATCAG +
Preference number: 6 (lower is better)
Translates to: LPEVPPTGYKSQ*AKGNPQVWSHQ
Trigger: CTGATGGCTCCATACCTGTGGATTTCCTTTTGCCCACTGGGATTTATATCCAGTTGGAGGTACCTCGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000465581.1
ENST00000477593.5
ENST00000483968.5
ENST00000674063.1
CDS GCA 72 bp TGCACTTTTCAACACTGCTTAGAAAGCACTTTCATGTaGCCCACACTTCCCCGGCAGTATGCTTCAAGGATG +
Preference number: 6 (lower is better)
Translates to: CTFQHCLESTFM*PTLPRQYASRM
Trigger: CATCCTTGAAGCATACTGCCGGGGAAGTGTGGGGCACATGAAAGTGCTTTCTAAGCAGTGTTGAAAAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473435.1
CDS CCA 72 bp TATAAATCCCAGTGGGCAAAAGGAAATCCACAGGTATaGAGCCATCAGATGCTATCTGTGAATCCACCGCCC +
Preference number: 6 (lower is better)
Translates to: YKSQWAKGNPQV*SHQMLSVNPPP
Trigger: GGGCGGTGGATTCACAGATAGCATCTGATGGCTCCATACCTGTGGATTTCCTTTTGCCCACTGGGATTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289153.6
ENST00000462898.5
ENST00000465581.1
ENST00000477593.5
ENST00000483968.5
ENST00000674063.1
CDS CAA 72 bp CCTGGCAAGATCCTCAGTCTTGTATCATTCTTCTGTTaGAGCATCAAAGCAAGAGATCAAAGGCTAAGAATG +
Preference number: 6 (lower is better)
Translates to: PGKILSLVSFFC*SIKARDQRLRM
Trigger: CATTCTTAGCCTTTGATCTCTTGCTTTGATGCTCAAACAGAAGAATGATACAAGACTGAGGATCTTGCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483968.5
CDS TCA 72 bp CTGAATTCTAGTTCCCTTACTGTACTCCATACACAATaGCAGCAGATGTCTTTTCAGCATCTTCCTATCAAC +
Preference number: 6 (lower is better)
Translates to: LNSSSLTVLHTQ*QQMSFQHLPIN
Trigger: GTTGATAGGAAGATGCTGAAAAGACATCTGCTGTCATTGTGTATGGAGTACAGTAAGGGAACTAGAATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487552.1
CDS CCA 72 bp ACTGTAACTATAACCCATATCCTGTCGATTGTTCACTaGAGAAAGGGGAAAGAGTTTAAAAGTTCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: TVTITHILSIVH*RKGKEFKSSQL
Trigger: AAGCTGAGAACTTTTAAACTCTTTCCCCTTTCTCCAGTGAACAATCGACAGGATATGGGTTATAGTTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465581.1
CDS CCA 72 bp TCCAAATATATCTCAGCTAAGAAATGCTGGTCCACCTaGTCAGATAAGAAAATGTTAGAAGTGTTCAGCCTT +
Preference number: 6 (lower is better)
Translates to: SKYISAKKCWST*SDKKMLEVFSL
Trigger: AAGGCTGAACACTTCTAACATTTTCTTATCTGACCAGGTGGACCAGCATTTCTTAGCTGAGATATATTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487552.1
CDS CAA 90 bp TCACCAAATACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTaGGAATCCATGTATTTGCACTTTTCAACACTGCTTAGAAAGCAC +
Preference number: 6 (lower is better)
Translates to: SPNTLLLYTSHKGFI*ESMYLHFSTLLRKH
Trigger: GTGCTTTCTAAGCAGTGTTGAAAAGTGCAAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGTATTTGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473435.1
CDS GCA 72 bp ATATCTCCCAGATCCAAATATATCTCAGCTAAGAAATaGTGGTCCACCTGGTCAGATAAGAAAATGTTAGAA +
Preference number: 6 (lower is better)
Translates to: ISPRSKYISAKK*WSTWSDKKMLE
Trigger: TTCTAACATTTTCTTATCTGACCAGGTGGACCAGCATTTCTTAGCTGAGATATATTTGGATCTGGGAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487552.1
CDS CCA 72 bp CCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTTaGAATCCATGTATTTGCACTTTTCAACACTGCTTA +
Preference number: 6 (lower is better)
Translates to: PCYCIPATKASF*NPCICTFQHCL
Trigger: TAAGCAGTGTTGAAAAGTGCAAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473435.1
CDS CAA 72 bp ACCTTGTTATTGTATACCAGCCACAAAGGCTTCATTTaGGAATCCATGTATTTGCACTTTTCAACACTGCTT +
Preference number: 6 (lower is better)
Translates to: TLLLYTSHKGFI*ESMYLHFSTLL
Trigger: AAGCAGTGTTGAAAAGTGCAAATACATGGATTCCAAAATGAAGCCTTTGTGGCTGGTATACAATAACAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473435.1