RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3CA (Homo sapiens)

Ensembl gene IDs: ENSG00000121879

Ensembl transcript IDs: ENST00000263967.4, ENST00000468036.1, ENST00000643187.1, ENST00000674534.1, ENST00000674622.1, ENST00000675467.1, ENST00000675786.1, ENST00000675796.1

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTaGGAGTTATTAACAGTGCAGTGTGGAATCCAGAGTGAGCTTTCA +
Preference number: 1 (lower is better)
Translates to: LFMDCAIPMQSVFAC*ELLTVQCGIQSELS
Trigger: TGAAAGCTCACTCTGGATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR GCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTaGATCATTCATTTGTTTCATGAAATACTCCAAAGCCTCTTGCTC +
Preference number: 1 (lower is better)
Translates to: CVEDPIHFCCPATMM*IIHLFHEILQSLLL
Trigger: GAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR TCA 90 bp TTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCATaGAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGG +
Preference number: 1 (lower is better)
Translates to: FLLSSHHDVHHSFVS*NTPKPLAQFYLRLG
Trigger: CCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR TCA 90 bp TTAATTGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGTTTCATGAAATACTCCAAAGCCTCT +
Preference number: 1 (lower is better)
Translates to: LIVWKIQSIFVVQPP*CASFICFMKYSKAS
Trigger: AGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR CAA 90 bp GCTGTTGAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTaGCATAATAGTGTGAGAATTTCGCACCACCTCAATAAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: AVELQCTFQAAFALN*HNSVRISHHLNKSH
Trigger: GTGGGACTTATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAGTGTGGCTGTTGAACTaGAGTGCACCTTTCAAGCCG +
Preference number: 2 (lower is better)
Translates to: SKASCSVLSKARVFRMYAVWLLN*SAPFKP
Trigger: CGGCTTGAAAGGTGCACTGCAGTTCAACAGCCACAC...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTACAGTAACTCTGACATaGTGTCTGGGTTCTCCCAAT +
Preference number: 2 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESTVTLT*CLGSPN
Trigger: ATTGGGAGAACCCAGACATCATGTCAGAGTTACTGT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTGTAGTGTGTGGCTGTTaGACTGCAGTGCACCTTTCA +
Preference number: 2 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTVVCGC*TAVHLS
Trigger: TGAAAGGTGCACTGCAGTTCAACAGCCACACACTAC...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGTGTGGCTGTTGAACTaGAGTGCACCTTTCAAGCCG +
Preference number: 2 (lower is better)
Translates to: YSKASCSVLSKARVFRMYVWLLN*SAPFKP
Trigger: CGGCTTGAAAGGTGCACTGCAGTTCAACAGCCACAC...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGTGTGGAATCCAGAGTaGGCTTTCATTTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESVWNPE*AFIFSV
Trigger: AACTGAGAAAATGAAAGCTCACTCTGGATTCCACAC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTCGGTCTTTGCCTGCTaGGAGTTATTAACAGTGCAG +
Preference number: 2 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYSVFAC*ELLTVQ
Trigger: CTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATAACAGGTCTCATTTGTaGCTGCTTCCAAAACTGCAG +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNNRSHL*LLPKLQ
Trigger: CTGCAGTTTTGGAAGCAGTCACAAATGAGACCTGTT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGAACAGGTCTCATTTGTaGCTGCTTCCAAAACTGCAG +
Preference number: 2 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVNRSHL*LLPKLQ
Trigger: CTGCAGTTTTGGAAGCAGTCACAAATGAGACCTGTT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTCCTGTAGAGCATCCATaGAATCTGGTCGCCTCATTT +
Preference number: 2 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTPVEHP*NLVASF
Trigger: AAATGAGGCGACCAGATTTCATGGATGCTCTACAGG...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTGACACTCTTCAAGCCTaGGGTTTCCTAGTTGATGAG +
Preference number: 2 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTDTLQA*GFLVDE
Trigger: CTCATCAACTAGGAAACCTCAGGCTTGAAGAGTGTC...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTTTGTCTTTGAGCCACTaGTGTAGTGTGTGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTLSLSH*CSVWLL
Trigger: CAACAGCCACACACTACATCAGTGGCTCAAAGACAA...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGCTTTGTTCTTGTCTTTaGGCCACTGATGTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVLCSCL*ATDVVC
Trigger: ACACACTACATCAGTGGCTCAAAGACAAGAACAAAG...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTATTGTGCAATTCCTATaGAATCGGTCTTTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESIVQFL*NRSLPA
Trigger: AGCAGGCAAAGACCGATTGCATAGGAATTGCACAAT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTGGGGTGCAAAACAATaGATGACTATGGGACAGATC +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNWGAKQ*MTMGQI
Trigger: GATCTGTCCCATAGTCATGCATTGTTTTGCACCCCA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263967.4
3UTR-3UTR GCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCGCTGTTGAACTGCAGTaGACCTTTCAAGCCGCCTTT +
Preference number: 2 (lower is better)
Translates to: CFMKYSKASCSVLSKARVAVELQ*TFQAAF
Trigger: AAAGGCGGCTTGAAAGGTGCACTGCAGTTCAACAGC...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTCTGTTACTCAGTCCTaGGTGGGAATAGCTAAATCC +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNSVTQS*VGIAKS
Trigger: GGATTTAGCTATTCCCACGCAGGACTGAGTAACAGA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR CCA 90 bp GCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGCACCACCTCAATCCAATTCAACCACAGTaGCCTTTTTGCAGAGGACAT +
Preference number: 2 (lower is better)
Translates to: AAFALNLHNSVRISHHLNPIQPQ*PFCRGH
Trigger: ATGTCCTCTGCAAAAAGGCCACTGTGGTTGAATTGG...ATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTAACAGGTCTCATTTGTaGCTGCTTCCAAAACTGCAG +
Preference number: 2 (lower is better)
Translates to: CVEDPIHFCCPATMMCIINRSHL*LLPKLQ
Trigger: CTGCAGTTTTGGAAGCAGTCACAAATGAGACCTGTT...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGATCAAGAAGAAAGCTaGCCATGCTGCTATGAACAA +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNDQEES*PCCYEQ
Trigger: TTGTTCATAGCAGCATGGTCAGCTTTCTTCTTGATC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
3UTR-3UTR TCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGT +
Preference number: 2 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIVVQPP*CASFIC
Trigger: ACAAATGAATGATGCACATCATGGTGGCTGGACAAC...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGT +
Preference number: 2 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYVVQPP*CASFIC
Trigger: ACAAATGAATGATGCACATCATGGTGGCTGGACAAC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCCCTGTAGAGCATCCATaGAATCTGGTCGCCTCATTT +
Preference number: 2 (lower is better)
Translates to: CFMKYSKASCSVLSKARVPVEHP*NLVASF
Trigger: AAATGAGGCGACCAGATTTCATGGATGCTCTACAGG...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATTTGTCTTTGAGCCACTaGTGTAGTGTGTGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: YSKASCSVLSKARVFRMYLSLSH*CSVWLL
Trigger: CAACAGCCACACACTACATCAGTGGCTCAAAGACAA...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATATTGTGCAATTCCTATaGAATCGGTCTTTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNIVQFL*NRSLPA
Trigger: AGCAGGCAAAGACCGATTGCATAGGAATTGCACAAT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGCTGTTCATGGATTGTaGAATTCCTATGCAATCGGT +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNAVHGL*NSYAIG
Trigger: ACCGATTGCATAGGAATTGCACAATCCATGAACAGC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTCCAGCCACCATGATGTaGATCATTCATTTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESPATMM*IIHLFH
Trigger: ATGAAACAAATGAATGATGCACATCATGGTGGCTGG...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGGCTGTTGAACTGCAGTaGACCTTTCAAGCCGCCTTT +
Preference number: 2 (lower is better)
Translates to: HERVNRSMAASYISPLFLAVELQ*TFQAAF
Trigger: AAAGGCGGCTTGAAAGGTGCACTGCAGTTCAACAGC...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTAGCATCCATGAAATCTaGTCGCCTCATTTGCTCAAC +
Preference number: 2 (lower is better)
Translates to: CVEDPIHFCCPATMMCIISIHEI*SPHLLN
Trigger: GTTGAGCAAATGAGGCGACCAGATTTCATGGATGCT...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGTCTTTGTGCATTCTTaGGCTCCTTTACTAATCACT +
Preference number: 2 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESVFVHS*APLLIT
Trigger: AGTGATTAGTAAAGGAGCCCAAGAATGCACAAAGAC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTGGGATACAGACCAATTaGCATGCTCTTCAATCACTG +
Preference number: 2 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTGIQTN*HALQSL
Trigger: CAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCC...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTGTGTGGAATCCAGAGTaGGCTTTCATTTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIVWNPE*AFIFSV
Trigger: AACTGAGAAAATGAAAGCTCACTCTGGATTCCACAC...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCACAGTAACTCTGACATaGTGTCTGGGTTCTCCCAAT +
Preference number: 2 (lower is better)
Translates to: CFMKYSKASCSVLSKARVTVTLT*CLGSPN
Trigger: ATTGGGAGAACCCAGACATCATGTCAGAGTTACTGT...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTATGATCTCATTGTTCTaGAACAGTAACTCTGACATG +
Preference number: 2 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESMISLF*NSNSDM
Trigger: CATGTCAGAGTTACTGTTTCAGAACAATGAGATCAT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGCATCGTCTTTCACCATaGTGTTACTATTGTGACGAT +
Preference number: 2 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVHRLSP*CYYCDD
Trigger: ATCGTCACAATAGTAACATCATGGTGAAAGACGATG...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAGCTGTTCATGGATTGTaGAATTCCTATGCAATCGGT +
Preference number: 2 (lower is better)
Translates to: SKASCSVLSKARVFRMYAAVHGL*NSYAIG
Trigger: ACCGATTGCATAGGAATTGCACAATCCATGAACAGC...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCCAGCCACCATGATGTaGATCATTCATTTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNPATMM*IIHLFH
Trigger: ATGAAACAAATGAATGATGCACATCATGGTGGCTGG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp GCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGCACCACCTCAATACAGACCAATTGGCATaGTCTTCAATCACTGACATA +
Preference number: 2 (lower is better)
Translates to: AAFALNLHNSVRISHHLNTDQLA*SSITDI
Trigger: TATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGT...ATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATACCAAGCAATACATCTaGGCTACTTCATCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNTKQYI*ATSSLE
Trigger: TTCTAGAGATGAAGTAGCCCAGATGTATTGCTTGGT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATATGATCTCATTGTTCTaGAACAGTAACTCTGACATG +
Preference number: 2 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNMISLF*NSNSDM
Trigger: CATGTCAGAGTTACTGTTTCAGAACAATGAGATCAT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTATGCAATCGGTCTTTaGCTGCTGAGAGTTATTAAC +
Preference number: 2 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYYAIGL*LLRVIN
Trigger: GTTAATAACTCTCAGCAGGCAAAGACCGATTGCATA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp ATTGTGACGATCTCCAATTCCCAAAATGAAGGTAGCTACACAGTATCCAGCACATATGCAATCGGTCTTTaGCTGCTGAGAGTTATTAAC +
Preference number: 2 (lower is better)
Translates to: IVTISNSQNEGSYTVSSTYAIGL*LLRVIN
Trigger: GTTAATAACTCTCAGCAGGCAAAGACCGATTGCATA...TGTGCTGGATACTGTGTAGCTACCTTCATTTTGGGAATTGGAGATCGTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAGCTGTTCATGGATTGTaGAATTCCTATGCAATCGGT +
Preference number: 2 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQAVHGL*NSYAIG
Trigger: ACCGATTGCATAGGAATTGCACAATCCATGAACAGC...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGGTCTTTCGAATGTATaGAATGTCATCAAAAGATTG +
Preference number: 2 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESGLSNV*NVIKRL
Trigger: CAATCTTTTGATGACATTGCATACATTCGAAAGACC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGAAACAGGTCAATGGCTaGATCATATATTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVKQVNG*IIYFSF
Trigger: AAAGGAGAAATATATGATGCAGCCATTGACCTGTTT...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAGTGTGGAATCCAGAGTaGGCTTTCATTTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSVWNPE*AFIFSV
Trigger: AACTGAGAAAATGAAAGCTCACTCTGGATTCCACAC...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGTTGAGAAAAGATTTATaGAGAGATTGGCATGCTGTC +
Preference number: 2 (lower is better)
Translates to: CTFQAAFALNLHNSVRISLRKDL*RDWHAV
Trigger: GACAGCATGCCAATCTCTTCATAAATCTTTTCTCAA...CGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGT +
Preference number: 2 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYVVQPP*CASFIC
Trigger: ACAAATGAATGATGCACATCATGGTGGCTGGACAAC...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATACAGTATCCAGCACATaGACGTGTAAACAGGTCAAT +
Preference number: 2 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNTVSST*TCKQVN
Trigger: ATTGACCTGTTTACACGTTCATGTGCTGGATACTGT...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGACAGTATCCAGCACATaGACGTGTAAACAGGTCAAT +
Preference number: 2 (lower is better)
Translates to: LDKPCNTSPETSQILLSLTVSST*TCKQVN
Trigger: ATTGACCTGTTTACACGTTCATGTGCTGGATACTGT...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTATGATGTTACTATTGTaGCGATCTCCAATTCCCAAA +
Preference number: 2 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIMMLLL*RSPIPK
Trigger: TTTGGGAATTGGAGATCGTCACAATAGTAACATCAT...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAACATCGTCTTTCACCATaGTGTTACTATTGTGACGAT +
Preference number: 2 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQHRLSP*CYYCDD
Trigger: ATCGTCACAATAGTAACATCATGGTGAAAGACGATG...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATTACTCCAAAGCCTCTTaGTCAGTTTTATCTAAGGCT +
Preference number: 2 (lower is better)
Translates to: YSKASCSVLSKARVFRMYYSKAS*SVLSKA
Trigger: AGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTACTCCAAAGCCTCTTaGTCAGTTTTATCTAAGGCT +
Preference number: 2 (lower is better)
Translates to: CFMKYSKASCSVLSKARVYSKAS*SVLSKA
Trigger: AGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAATTCTCTTGTCTTTGTaGATTCTTGGGCTCCTTTAC +
Preference number: 2 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQILLSL*ILGLLY
Trigger: GTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAAT...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGATTTGCATAATAGTGTaGGAATTTCGCACCACCTCA +
Preference number: 2 (lower is better)
Translates to: HERVNRSMAASYISPLFLICIIV*EFRTTS
Trigger: TGAGGTGGTGCGAAATTCTCACACTATTATGCAAAT...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGATGCTCTTCAATCACTaGCATATCTGGGAACTTTAC +
Preference number: 2 (lower is better)
Translates to: LDKPCNTSPETSQILLSLMLFNH*HIWELY
Trigger: GTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCAT...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR GCA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATGCTGTTCATGGATTGTaGAATTCCTATGCAATCGGT +
Preference number: 2 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYAVHGL*NSYAIG
Trigger: ACCGATTGCATAGGAATTGCACAATCCATGAACAGC...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTGGTCTTTCGAATGTATaGAATGTCATCAAAAGATTG +
Preference number: 2 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTGLSNV*NVIKRL
Trigger: CAATCTTTTGATGACATTGCATACATTCGAAAGACC...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCACCAGCCACCATGATGTaGATCATTCATTTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSPATMM*IIHLFH
Trigger: ATGAAACAAATGAATGATGCACATCATGGTGGCTGG...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CCA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATGTCTTTGTGCATTCTTaGGCTCCTTTACTAATCACT +
Preference number: 2 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNVFVHS*APLLIT
Trigger: AGTGATTAGTAAAGGAGCCCAAGAATGCACAAAGAC...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATGTGTGGAATCCAGAGTaGGCTTTCATTTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDVWNPE*AFIFSV
Trigger: AACTGAGAAAATGAAAGCTCACTCTGGATTCCACAC...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR TCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCATTGAGAAAAGATTTATaGAGAGATTGGCATGCTGTC +
Preference number: 2 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSLRKDL*RDWHAV
Trigger: GACAGCATGCCAATCTCTTCATAAATCTTTTCTCAA...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATATTGTGCAATTCCTATaGAATCGGTCTTTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDIVQFL*NRSLPA
Trigger: AGCAGGCAAAGACCGATTGCATAGGAATTGCACAAT...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGAGTGTTAGCATATCTTaGCGTAAATCATCCCCATTT +
Preference number: 2 (lower is better)
Translates to: HERVNRSMAASYISPLFLSVSIS*RKSSPF
Trigger: AAATGGGGATGATTTACGGCAAGATATGCTAACACT...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR GCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAGGTCTTTCGAATGTATaGAATGTCATCAAAAGATTG +
Preference number: 2 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSGLSNV*NVIKRL
Trigger: CAATCTTTTGATGACATTGCATACATTCGAAAGACC...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR CAA 90 bp ATCTCTGATACTGAAGTACCCAGAAGTGGCTATATTATCACTGACTaGAAACAGATCTTAGTCACCCATGTAGCATTTAATTCAATGTTT +
Preference number: 2 (lower is better)
Translates to: ISDTEVPRSGYIITD*KQILVTHVAFNSMF
Trigger: AAACATTGAATTAAATGCTACATGGGTGACTAAGATCTGTTTCAAGTCAGTGATAATATAGCCACTTCTGGGTACTTCAGTATCAGAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
3UTR GCA 72 bp TCTGTTACTCAGTCCTGCGTGGGAATAGCTAAATCCTaGTTCTCGGGATACAGACCAATTGGCATGCTCTTC +
Preference number: 3 (lower is better)
Translates to: SVTQSCVGIAKS*FSGYRPIGMLF
Trigger: GAAGAGCATGCCAATTGGTCTGTATCCCGAGAAGCAGGATTTAGCTATTCCCACGCAGGACTGAGTAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTCCACACAGTCACCGATaGACAGACAACCATAAGGTA +
Preference number: 3 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESPHSHR*TDNHKV
Trigger: TACCTTATGGTTGTCTGTCAATCGGTGACTGTGTGG...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCATGTAGTGTGTGGCTGTaGAACTGCAGTGCACCTTTC +
Preference number: 3 (lower is better)
Translates to: SKASCSVLSKARVFRMYACSVWL*NCSAPF
Trigger: GAAAGGTGCACTGCAGTTCAACAGCCACACACTACA...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR TCA 72 bp TCGGGATACAGACCAATTGGCATGCTCTTCAATCACTaGCATATCTGGGAACTTTACCACACTGCTGAACCA +
Preference number: 3 (lower is better)
Translates to: SGYRPIGMLFNH*HIWELYHTAEP
Trigger: TGGTTCAGCAGTGTGGTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTAGATCCAATCCATTTTaGTTGTCCAGCCACCATGAT +
Preference number: 3 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESRSNPF*LSSHHD
Trigger: ATCATGGTGGCTGGACAACAAAAATGGATTGGATCT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTCCACACAGTCACCGATaGACAGACAACCATAAGGTA +
Preference number: 3 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTPHSHR*TDNHKV
Trigger: TACCTTATGGTTGTCTGTCAATCGGTGACTGTGTGG...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTCAAATTCTCTTGTCTTaGTGCATTCTTGGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESQILLS*CILGLL
Trigger: AAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTG...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR TCA 72 bp GATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTaGGAGTTATTAACAGTGCAGTGTGGAATCCAGAGT +
Preference number: 3 (lower is better)
Translates to: DCAIPMQSVFAC*ELLTVQCGIQS
Trigger: ACTCTGGATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR GCA 72 bp CTAAATCCTGCTTCTCGGGATACAGACCAATTGGCATaGTCTTCAATCACTGACATATCTGGGAACTTTACC +
Preference number: 3 (lower is better)
Translates to: LNPASRDTDQLA*SSITDISGNFT
Trigger: GGTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGAAGCAGGATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTCCAATCCATTTTTGTaGTCCAGCCACCATGATGTG +
Preference number: 3 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYSNPFL*SSHHDV
Trigger: CACATCATGGTGGCTGGACAACAAAAATGGATTGGA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGAGATCCAATCCATTTTaGTTGTCCAGCCACCATGAT +
Preference number: 3 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVRSNPF*LSSHHD
Trigger: ATCATGGTGGCTGGACAACAAAAATGGATTGGATCT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAACGGGATACAGACCAATaGGCATGCTCTTCAATCACT +
Preference number: 3 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQRDTDQ*ACSSIT
Trigger: AGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCG...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGAATGCTGTTCATGGATaGTGCAATTCCTATGCAATC +
Preference number: 3 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVNAVHG*CNSYAI
Trigger: GATTGCATAGGAATTGCACAATCCATGAACAGCATT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATAATGCTGTTCATGGATaGTGCAATTCCTATGCAATC +
Preference number: 3 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNNAVHG*CNSYAI
Trigger: GATTGCATAGGAATTGCACAATCCATGAACAGCATT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTACAGACAGAAGCAATTaGGGTAGAATTTCGGGGATA +
Preference number: 3 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTTDRSN*GRISGI
Trigger: TATCCCCGAAATTCTACCCAAATTGCTTCTGTCTGT...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
3UTR TCA 72 bp TCAGCTATAGATAGGAACTGTCTAAACCACGAGAACTaGTCTCTGATACTGAAGTACCCAGAAGTGGCTATA +
Preference number: 3 (lower is better)
Translates to: SAIDRNCLNHEN*SLILKYPEVAI
Trigger: TATAGCCACTTCTGGGTACTTCAGTATCAGAGATCAGTTCTCGTGGTTTAGACAGTTCCTATCTATAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
3UTR-3UTR CAA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAAATGCTGTTCATGGATaGTGCAATTCCTATGCAATC +
Preference number: 3 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSNAVHG*CNSYAI
Trigger: GATTGCATAGGAATTGCACAATCCATGAACAGCATT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATAGATTTATGAAGAGATaGGCATGCTGTCGAATAGCT +
Preference number: 3 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYRFMKR*ACCRIA
Trigger: AGCTATTCGACAGCATGCCAATCTCTTCATAAATCT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCATCCAATCCATTTTTGTaGTCCAGCCACCATGATGTG +
Preference number: 3 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSSNPFL*SSHHDV
Trigger: CACATCATGGTGGCTGGACAACAAAAATGGATTGGA...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGTCCAATCCATTTTTGTaGTCCAGCCACCATGATGTG +
Preference number: 3 (lower is better)
Translates to: HERVNRSMAASYISPLFLSNPFL*SSHHDV
Trigger: CACATCATGGTGGCTGGACAACAAAAATGGATTGGA...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGCCTTTGCACTGAATTaGCATAATAGTGTGAGAATT +
Preference number: 3 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVAFALN*HNSVRI
Trigger: AATTCTCACACTATTATGCAAATTCAGTGCAAAGGC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGTCGAAGATCAAGACCTaGATTTTGCCAGATATTTTC +
Preference number: 3 (lower is better)
Translates to: CTFQAAFALNLHNSVRISSKIKT*ILPDIF
Trigger: GAAAATATCTGGCAAAATCAAGGTCTTGATCTTCGA...CGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTCGAAGATCAAGACCTaGATTTTGCCAGATATTTTC +
Preference number: 3 (lower is better)
Translates to: CFMKYSKASCSVLSKARVSKIKT*ILPDIF
Trigger: GAAAATATCTGGCAAAATCAAGGTCTTGATCTTCGA...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATATCTATATGAAACAGTaGTCCATCGTCTTTCACCAT +
Preference number: 3 (lower is better)
Translates to: YSKASCSVLSKARVFRMYIYMKQ*SIVFHH
Trigger: ATGGTGAAAGACGATGGACAACTGTTTCATATAGAT...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR GCA 72 bp GATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTaGATCATTCATTTGTTTCATGAAATACTCCAAAGC +
Preference number: 3 (lower is better)
Translates to: DPIHFCCPATMM*IIHLFHEILQS
Trigger: GCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
3UTR-3UTR CAA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATAATGCTGTTCATGGATaGTGCAATTCCTATGCAATC +
Preference number: 3 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYNAVHG*CNSYAI
Trigger: GATTGCATAGGAATTGCACAATCCATGAACAGCATT...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR TCA 72 bp AATCTATATGAAACAGTTGTCCATCGTCTTTCACCATaGTGTTACTATTGTGACGATCTCCAATTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: NLYETVVHRLSP*CYYCDDLQFPK
Trigger: TTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAACTGTTTCATATAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCGGAGTCCTCGGGCGTaGCAGCCCCTCAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIRSPRA*QPLKKS
Trigger: GCTTTTCTTGAGGGGCTGTCACGCCCGAGGACTCCG...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGGGGCATCAAGTGGATaGCCCACAGTTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESGASSG*PTVHLM
Trigger: CATCAGGTGAACTGTGGGGCATCCACTTGATGCCCC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGGGGCATCAAGTGGATaGCCCACAGTTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVGASSG*PTVHLM
Trigger: CATCAGGTGAACTGTGGGGCATCCACTTGATGCCCC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCTTGGGGGCATCAAGTaGATGCCCCACAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNLGGIK*MPHSSP
Trigger: AGGTGAACTGTGGGGCATCCACTTGATGCCCCCAAG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGCTTGGGGGCATCAAGTaGATGCCCCACAGTTCACCT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVLGGIK*MPHSSP
Trigger: AGGTGAACTGTGGGGCATCCACTTGATGCCCCCAAG...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGTAGTGTGTGGCTGTTaGACTGCAGTGCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESVVCGC*TAVHLS
Trigger: TGAAAGGTGCACTGCAGTTCAACAGCCACACACTAC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGGGGCATCAAGTGGATaGCCCACAGTTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYGASSG*PTVHLM
Trigger: CATCAGGTGAACTGTGGGGCATCCACTTGATGCCCC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGTGTGGCTGTTGAACTaGAGTGCACCTTTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVVWLLN*SAPFKP
Trigger: CGGCTTGAAAGGTGCACTGCAGTTCAACAGCCACAC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGGACACTCTTCAAGCCTaGGGTTTCCTAGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVDTLQA*GFLVDE
Trigger: CTCATCAACTAGGAAACCTCAGGCTTGAAGAGTGTC...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGTAGTGTGTGGCTGTTaGACTGCAGTGCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVVVCGC*TAVHLS
Trigger: TGAAAGGTGCACTGCAGTTCAACAGCCACACACTAC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTCGGTCTTTGCCTGCTaGGAGTTATTAACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSVFAC*ELLTVQ
Trigger: CTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGCTGTTGAACTGCAGTaGACCTTTCAAGCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVAVELQ*TFQAAF
Trigger: AAAGGCGGCTTGAAAGGTGCACTGCAGTTCAACAGC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGCTGTTGAACTGCAGTaGACCTTTCAAGCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNAVELQ*TFQAAF
Trigger: AAAGGCGGCTTGAAAGGTGCACTGCAGTTCAACAGC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCGTGTGGCTGTTGAACTaGAGTGCACCTTTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACVWLLN*SAPFKP
Trigger: CGGCTTGAAAGGTGCACTGCAGTTCAACAGCCACAC...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTGTGTGGCTGTTGAACTaGAGTGCACCTTTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTVWLLN*SAPFKP
Trigger: CGGCTTGAAAGGTGCACTGCAGTTCAACAGCCACAC...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCTCGGGATACAGACCAATTGGCATGCTCTTCAATCACTGACATATCTGGGAACGCCATTCATTCCACCTaGGATTGGAACAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: SRDTDQLACSSITDISGNAIHST*DWNKVL
Trigger: GAGTACCTTGTTCCAATCCCAGGTGGAATGAATGGC...GTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGGCTCACAGCATTTTTaGCACTCGGGTAAAACACAG +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESGSQHF*HSGKTQ
Trigger: CTGTGTTTTACCCGAGTGCCAAAAATGCTGTGAGCC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTGCTCTACTATGAGGTaGATTGAGGTCCCTAAGATC +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESCSTMR*IEVPKI
Trigger: GATCTTAGGGACCTCAATTCACCTCATAGTAGAGCA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTACTTTACCACACTGCTaGACCAGTCAAACTCCAACT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESTLPHC*TSQTPT
Trigger: AGTTGGAGTTTGACTGGTTCAGCAGTGTGGTAAAGT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGCCTGTAGAGCATCCATaGAATCTGGTCGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVPVEHP*NLVASF
Trigger: AAATGAGGCGACCAGATTTCATGGATGCTCTACAGG...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCCTGTAGAGCATCCATaGAATCTGGTCGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNPVEHP*NLVASF
Trigger: AAATGAGGCGACCAGATTTCATGGATGCTCTACAGG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGACACTCTTCAAGCCTaGGGTTTCCTAGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNDTLQA*GFLVDE
Trigger: CTCATCAACTAGGAAACCTCAGGCTTGAAGAGTGTC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCTCGGGATACAGACCAATTGGCATGCTCTTCAATCACTGACATATCTGGGAACGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGT +
Preference number: 4 (lower is better)
Translates to: SRDTDQLACSSITDISGNVVQPP*CASFIC
Trigger: ACAAATGAATGATGCACATCATGGTGGCTGGACAAC...GTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTCGGTCTTTGCCTGCTaGGAGTTATTAACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNSVFAC*ELLTVQ
Trigger: CTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAGTGTGGCTGTTGAACTaGAGTGCACCTTTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQVWLLN*SAPFKP
Trigger: CGGCTTGAAAGGTGCACTGCAGTTCAACAGCCACAC...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGCGGCCATGTGGTTTGTaGATTTTAATGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVRPCGL*ILMVER
Trigger: CCTCTCCACCATTAAAATGCACAAACCACATGGCCG...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGCCATTCATTCCACCTaGGATTGGAACAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNAIHST*DWNKVL
Trigger: GAGTACCTTGTTCCAATCCCAGGTGGAATGAATGGC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGATTTCCCCATGCCAATaGACAGTGTTCCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVISPCQ*TVFLFS
Trigger: GCTAAAGAGGAACACTGTCCATTGGCATGGGGAAAT...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTAGCATCCATGAAATCTaGTCGCCTCATTTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSIHEI*SPHLLN
Trigger: GTTGAGCAAATGAGGCGACCAGATTTCATGGATGCT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGCCAATTCAACCACAGTaGCCTTTTTGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVPIQPQ*PFCRGH
Trigger: ATGTCCTCTGCAAAAAGGCCACTGTGGTTGAATTGG...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
3UTR CAA 72 bp CTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTaGCATAATAGTGTGAGAATTTCGCACCACCTCAAT +
Preference number: 4 (lower is better)
Translates to: LQCTFQAAFALN*HNSVRISHHLN
Trigger: ATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTGCTCTACTATGAGGTaGATTGAGGTCCCTAAGATC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNCSTMR*IEVPKI
Trigger: GATCTTAGGGACCTCAATTCACCTCATAGTAGAGCA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTACATTGCTCTACTATaGGGTGAATTGAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESYIALL*GELRSL
Trigger: TAGGGACCTCAATTCACCTCATAGTAGAGCAATGTA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCTCGGGATACAGACCAATTGGCATGCTCTTCAATCACTGACATATCTGGGAACTACATTGCTCTACTATaGGGTGAATTGAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: SRDTDQLACSSITDISGNYIALL*GELRSL
Trigger: TAGGGACCTCAATTCACCTCATAGTAGAGCAATGTA...GTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR TCA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCGACACTCTTCAAGCCTaGGGTTTCCTAGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACDTLQA*GFLVDE
Trigger: CTCATCAACTAGGAAACCTCAGGCTTGAAGAGTGTC...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGACAGTAACTCTGACATaGTGTCTGGGTTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVTVTLT*CLGSPN
Trigger: ATTGGGAGAACCCAGACATCATGTCAGAGTTACTGT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTTGTCTTTGAGCCACTaGTGTAGTGTGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYLSLSH*CSVWLL
Trigger: CAACAGCCACACACTACATCAGTGGCTCAAAGACAA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTCTTTGTTCTTGTCTTTaGGCCACTGATGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESLCSCL*ATDVVC
Trigger: ACACACTACATCAGTGGCTCAAAGACAAGAACAAAG...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVVVQPP*CASFIC
Trigger: ACAAATGAATGATGCACATCATGGTGGCTGGACAAC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGGTGTGGAATCCAGAGTaGGCTTTCATTTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVVWNPE*AFIFSV
Trigger: AACTGAGAAAATGAAAGCTCACTCTGGATTCCACAC...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTTCGGTCTTTGCCTGCTaGGAGTTATTAACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: CVEDPIHFCCPATMMCIISVFAC*ELLTVQ
Trigger: CTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGA...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGTGCAAAACAATGCATaGCTATGGGACAGATCATGT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESVQNNA*LWDRSC
Trigger: ACATGATCTGTCCCATAGTCATGCATTGTTTTGCAC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR GCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGGAATAGCTAAATCCTaGTTCTCGGGATACAGACCA +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVGIAKS*FSGYRP
Trigger: TGGTCTGTATCCCGAGAAGCAGGATTTAGCTATTCC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGCTGTTCATGGATTGTaGAATTCCTATGCAATCGGT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESAVHGL*NSYAIG
Trigger: ACCGATTGCATAGGAATTGCACAATCCATGAACAGC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGGGTGCAAAACAATaGATGACTATGGGACAGATC +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVWGAKQ*MTMGQI
Trigger: GATCTGTCCCATAGTCATGCATTGTTTTGCACCCCA...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCATTCCACCTGGGATTaGAACAAGGTACTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNHSTWD*NKVLFE
Trigger: CTCAAAGAGTACCTTGTTCCAATCCCAGGTGGAATG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTGCCATTCATTCCACCTaGGATTGGAACAAGGTACTC +
Preference number: 4 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIAIHST*DWNKVL
Trigger: GAGTACCTTGTTCCAATCCCAGGTGGAATGAATGGC...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGATTTCCCCATGCCAATaGACAGTGTTCCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVISPCQ*TVFLFS
Trigger: GCTAAAGAGGAACACTGTCCATTGGCATGGGGAAAT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGGGATACAGACCAATTaGCATGCTCTTCAATCACTG +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNGIQTN*HALQSL
Trigger: CAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTCCCTTTCTGCTTCTTaGGTAACACTTACGAAAATG +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSLSAS*VTLTKM
Trigger: CATTTTCGTAAGTGTTACTCAAGAAGCAGAAAGGGA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTAACCAATTTCTCGATTaGGGATCTTTTCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESNQFLD*GSFLHG
Trigger: ACCGTGAAGAAAAGATCCTCAATCGAGAAATTGGTT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGCTTTGGCAATTCTGGTaGAGATTCTACATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVLWQFW*RFYIWR
Trigger: CCTCCAAATGTAGAATCTTCACCAGAATTGCCAAAG...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTAAATCTTCTAATCCATaGGGTACTGGCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESKSSNP*GTGQRF
Trigger: GAATCTTTGGCCAGTACCTCATGGATTAGAAGATTT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAACTTTACCACACTGCTaGACCAGTCAAACTCCAACT +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYATLPHC*TSQTPT
Trigger: AGTTGGAGTTTGACTGGTTCAGCAGTGTGGTAAAGT...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTATGCTCTTCAATCACTaGCATATCTGGGAACTTTAC +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESMLFNH*HIWELY
Trigger: GTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCAT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGACAGTAACTCTGACATaGTGTCTGGGTTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: CTFQAAFALNLHNSVRISTVTLT*CLGSPN
Trigger: ATTGGGAGAACCCAGACATCATGTCAGAGTTACTGT...CGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATACAGTATCCAGCACATaGACGTGTAAACAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNTVSST*TCKQVN
Trigger: ATTGACCTGTTTACACGTTCATGTGCTGGATACTGT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTCATCGTCTTTCACCATaGTGTTACTATTGTGACGAT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESHRLSP*CYYCDD
Trigger: ATCGTCACAATAGTAACATCATGGTGAAAGACGATG...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGTGTGGAATCCAGAGTaGGCTTTCATTTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNVWNPE*AFIFSV
Trigger: AACTGAGAAAATGAAAGCTCACTCTGGATTCCACAC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATAACAGGTCTCATTTGTaGCTGCTTCCAAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYNRSHL*LLPKLQ
Trigger: CTGCAGTTTTGGAAGCAGTCACAAATGAGACCTGTT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGATCAAGAAGAAAGCTaGCCATGCTGCTATGAACAA +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVDQEES*PCCYEQ
Trigger: TTGTTCATAGCAGCATGGTCAGCTTTCTTCTTGATC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTATCAGATTCTAGAATaGCGACTAGCAGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVYQILE*RLAVAS
Trigger: AGAGGCTACTGCTAGTCGTCATTCTAGAATCTGATA...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCTAAACCACGAGAACTaGTCTCTGATACTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNLNHEN*SLILKY
Trigger: GTACTTCAGTATCAGAGATCAGTTCTCGTGGTTTAG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR GCA 90 bp GCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGCACCACCTCAATGTTTATATTTCCCCATaGCAATGGACAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AAFALNLHNSVRISHHLNVYISP*QWTVFL
Trigger: GAGGAACACTGTCCATTGGCATGGGGAAATATAAAC...ATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTGGAATAGCTAAATCCTaGTTCTCGGGATACAGACCA +
Preference number: 4 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIGIAKS*FSGYRP
Trigger: TGGTCTGTATCCCGAGAAGCAGGATTTAGCTATTCC...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGGAATAGCTAAATCCTaGTTCTCGGGATACAGACCA +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYGIAKS*FSGYRP
Trigger: TGGTCTGTATCCCGAGAAGCAGGATTTAGCTATTCC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCATCTGTTACTCAGTCCTaGGTGGGAATAGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYASVTQS*VGIAKS
Trigger: GGATTTAGCTATTCCCACGCAGGACTGAGTAACAGA...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTCTGTTACTCAGTCCTaGGTGGGAATAGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYSVTQS*VGIAKS
Trigger: GGATTTAGCTATTCCCACGCAGGACTGAGTAACAGA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATATCAAATTCACACACTaGCATGCCGATAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNIKFTH*HADSKT
Trigger: GGTTTTGCTATCGGCATGCCAGTGTGTGAATTTGAT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGCGTCTGGAATAAGATaGCATTGTAAAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESASGIR*HCKTVH
Trigger: ATGGACTGTTTTACAATGCCATCTTATTCCAGACGC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTTCTCCATTCATATATaGTGTAGCTGTGGAAATGCG +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESFSIHI*CSCGNA
Trigger: CGCATTTCCACAGCTACACCATATATGAATGGAGAA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCTCGGGATACAGACCAATTGGCATGCTCTTCAATCACTGACATATCTGGGAACTTCTCCATTCATATATaGTGTAGCTGTGGAAATGCG +
Preference number: 4 (lower is better)
Translates to: SRDTDQLACSSITDISGNFSIHI*CSCGNA
Trigger: CGCATTTCCACAGCTACACCATATATGAATGGAGAA...GTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CCA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCCATTCCACCTGGGATTaGAACAAGGTACTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACHSTWD*NKVLFE
Trigger: CTCAAAGAGTACCTTGTTCCAATCCCAGGTGGAATG...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAATTTCCCCATGCCAATaGACAGTGTTCCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSISPCQ*TVFLFS
Trigger: GCTAAAGAGGAACACTGTCCATTGGCATGGGGAAAT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAGGGATACAGACCAATTaGCATGCTCTTCAATCACTG +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSGIQTN*HALQSL
Trigger: CAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCC...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCAGCATCCATGAAATCTaGTCGCCTCATTTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACSIHEI*SPHLLN
Trigger: GTTGAGCAAATGAGGCGACCAGATTTCATGGATGCT...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATCCAATTCAACCACAGTaGCCTTTTTGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYPIQPQ*PFCRGH
Trigger: ATGTCCTCTGCAAAAAGGCCACTGTGGTTGAATTGG...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCACCAATTCAACCACAGTaGCCTTTTTGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYAPIQPQ*PFCRGH
Trigger: ATGTCCTCTGCAAAAAGGCCACTGTGGTTGAATTGG...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTCCCTTTCTGCTTCTTaGGTAACACTTACGAAAATG +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNSLSAS*VTLTKM
Trigger: CATTTTCGTAAGTGTTACTCAAGAAGCAGAAAGGGA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATCTTTGGCAATTCTGGTaGAGATTCTACATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYLWQFW*RFYIWR
Trigger: CCTCCAAATGTAGAATCTTCACCAGAATTGCCAAAG...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGATGCTCTTCAATCACTaGCATATCTGGGAACTTTAC +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVMLFNH*HIWELY
Trigger: GTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCAT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATACAGTAACTCTGACATaGTGTCTGGGTTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: YSKASCSVLSKARVFRMYTVTLT*CLGSPN
Trigger: ATTGGGAGAACCCAGACATCATGTCAGAGTTACTGT...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGATTTGCATAATAGTGTaGGAATTTCGCACCACCTCA +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVICIIV*EFRTTS
Trigger: TGAGGTGGTGCGAAATTCTCACACTATTATGCAAAT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTTGTCTTTGAGCCACTaGTGTAGTGTGTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LDKPCNTSPETSQILLSLLSLSH*CSVWLL
Trigger: CAACAGCCACACACTACATCAGTGGCTCAAAGACAA...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATCTTTGTTCTTGTCTTTaGGCCACTGATGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYLCSCL*ATDVVC
Trigger: ACACACTACATCAGTGGCTCAAAGACAAGAACAAAG...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCACTTTGTTCTTGTCTTTaGGCCACTGATGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYALCSCL*ATDVVC
Trigger: ACACACTACATCAGTGGCTCAAAGACAAGAACAAAG...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATACAGTATCCAGCACATaGACGTGTAAACAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYTVSST*TCKQVN
Trigger: ATTGACCTGTTTACACGTTCATGTGCTGGATACTGT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGACAGTATCCAGCACATaGACGTGTAAACAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: CTFQAAFALNLHNSVRISTVSST*TCKQVN
Trigger: ATTGACCTGTTTACACGTTCATGTGCTGGATACTGT...CGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAACAGTATCCAGCACATaGACGTGTAAACAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYATVSST*TCKQVN
Trigger: ATTGACCTGTTTACACGTTCATGTGCTGGATACTGT...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCTCGGGATACAGACCAATTGGCATGCTCTTCAATCACTGACATATCTGGGAACATGATGTTACTATTGTaGCGATCTCCAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SRDTDQLACSSITDISGNMMLLL*RSPIPK
Trigger: TTTGGGAATTGGAGATCGTCACAATAGTAACATCAT...GTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCATCGTCTTTCACCATaGTGTTACTATTGTGACGAT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNHRLSP*CYYCDD
Trigger: ATCGTCACAATAGTAACATCATGGTGAAAGACGATG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTGTGTGGAATCCAGAGTaGGCTTTCATTTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTVWNPE*AFIFSV
Trigger: AACTGAGAAAATGAAAGCTCACTCTGGATTCCACAC...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATAACAGGTCTCATTTGTaGCTGCTTCCAAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: YSKASCSVLSKARVFRMYNRSHL*LLPKLQ
Trigger: CTGCAGTTTTGGAAGCAGTCACAAATGAGACCTGTT...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATAAATGGGATAGTGCCTaGGCCTCATCTATAGATCAA +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYKWDSA*ASSIDQ
Trigger: TTGATCTATAGATGAGGCTCAGGCACTATCCCATTT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGTTTATATTTCCCCATaGCAATGGACAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYVYISP*QWTVFL
Trigger: GAGGAACACTGTCCATTGGCATGGGGAAATATAAAC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAGTTTATATTTCCCCATaGCAATGGACAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYAVYISP*QWTVFL
Trigger: GAGGAACACTGTCCATTGGCATGGGGAAATATAAAC...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTAGTGTTAGCATATCTTaGCGTAAATCATCCCCATTT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSVSIS*RKSSPF
Trigger: AAATGGGGATGATTTACGGCAAGATATGCTAACACT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGTGTTAGCATATCTTaGCGTAAATCATCCCCATTT +
Preference number: 4 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVSVSIS*RKSSPF
Trigger: AAATGGGGATGATTTACGGCAAGATATGCTAACACT...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATGCTGTTGAACTGCAGTaGACCTTTCAAGCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYAVELQ*TFQAAF
Trigger: AAAGGCGGCTTGAAAGGTGCACTGCAGTTCAACAGC...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATATTCTCTTGTCTTTGTaGATTCTTGGGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNILLSL*ILGLLY
Trigger: GTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAAT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTACTCCAAAGCCTCTTaGTCAGTTTTATCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNYSKAS*SVLSKA
Trigger: AGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTATGCAATCGGTCTTTaGCTGCTGAGAGTTATTAAC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNYAIGL*LLRVIN
Trigger: GTTAATAACTCTCAGCAGGCAAAGACCGATTGCATA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAATTGTGCAATTCCTATaGAATCGGTCTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSIVQFL*NRSLPA
Trigger: AGCAGGCAAAGACCGATTGCATAGGAATTGCACAAT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAGCTGTTCATGGATTGTaGAATTCCTATGCAATCGGT +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSAVHGL*NSYAIG
Trigger: ACCGATTGCATAGGAATTGCACAATCCATGAACAGC...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATATCAAATTCACACACTaGCATGCCGATAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYIKFTH*HADSKT
Trigger: GGTTTTGCTATCGGCATGCCAGTGTGTGAATTTGAT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTCTGGTACACAGTCATaGTTGATTTTCAGAGTATAC +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSGTQS*LIFRVY
Trigger: GTATACTCTGAAAATCAACCATGACTGTGTACCAGA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTAGCAATTACTTGTTCTaGTACACAGTCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSNYLF*YTVMVD
Trigger: ATCAACCATGACTGTGTACCAGAACAAGTAATTGCT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGTCTTTGTGCATTCTTaGGCTCCTTTACTAATCACT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNVFVHS*APLLIT
Trigger: AGTGATTAGTAAAGGAGCCCAAGAATGCACAAAGAC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGTGAAATCGGCCATGTaGTTTGTGCATTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNVKSAM*FVHFNG
Trigger: ACCATTAAAATGCACAAACCACATGGCCGATTTCAC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263967.4
3UTR CAA 72 bp TCTGTTCTTGCTGTAAATTCTAATGCTGTTCATGGATaGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVLAVNSNAVHG*CNSYAIGLCLL
Trigger: CAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCATTAGAATTTACAGCAAGAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTTCCCTTTCTGCTTCTTaGGTAACACTTACGAAAATG +
Preference number: 4 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTSLSAS*VTLTKM
Trigger: CATTTTCGTAAGTGTTACTCAAGAAGCAGAAAGGGA...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGAACAAGGTACTCTTTaGGTGTTCACATTGTCACAT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYEQGTL*VFTLSH
Trigger: ATGTGACAATGTGAACACTCAAAGAGTACCTTGTTC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAGAACAAGGTACTCTTTaGGTGTTCACATTGTCACAT +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSEQGTL*VFTLSH
Trigger: ATGTGACAATGTGAACACTCAAAGAGTACCTTGTTC...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAGAACAAGGTACTCTTTaGGTGTTCACATTGTCACAT +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYAEQGTL*VFTLSH
Trigger: ATGTGACAATGTGAACACTCAAAGAGTACCTTGTTC...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATAAATCTTCTAATCCATaGGGTACTGGCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYKSSNP*GTGQRF
Trigger: GAATCTTTGGCCAGTACCTCATGGATTAGAAGATTT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGAAATCTTCTAATCCATaGGGTACTGGCCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: CTFQAAFALNLHNSVRISKSSNP*GTGQRF
Trigger: GAATCTTTGGCCAGTACCTCATGGATTAGAAGATTT...CGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR TCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAATGCTCTTCAATCACTaGCATATCTGGGAACTTTAC +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSMLFNH*HIWELY
Trigger: GTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCAT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATGACACTCTTCAAGCCTaGGGTTTCCTAGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYDTLQA*GFLVDE
Trigger: CTCATCAACTAGGAAACCTCAGGCTTGAAGAGTGTC...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGATGATCTCATTGTTCTaGAACAGTAACTCTGACATG +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVMISLF*NSNSDM
Trigger: CATGTCAGAGTTACTGTTTCAGAACAATGAGATCAT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAACTTTGTTCTTGTCTTTaGGCCACTGATGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQLCSCL*ATDVVC
Trigger: ACACACTACATCAGTGGCTCAAAGACAAGAACAAAG...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGATGATGTTACTATTGTaGCGATCTCCAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVMMLLL*RSPIPK
Trigger: TTTGGGAATTGGAGATCGTCACAATAGTAACATCAT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTCATCGTCTTTCACCATaGTGTTACTATTGTGACGAT +
Preference number: 4 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTHRLSP*CYYCDD
Trigger: ATCGTCACAATAGTAACATCATGGTGAAAGACGATG...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTTGAGAAAAGATTTATaGAGAGATTGGCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVLRKDL*RDWHAV
Trigger: GACAGCATGCCAATCTCTTCATAAATCTTTTCTCAA...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGT +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSVVQPP*CASFIC
Trigger: ACAAATGAATGATGCACATCATGGTGGCTGGACAAC...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGGTTGTCCAGCCACCATaGTGTGCATCATTCATTTGT +
Preference number: 4 (lower is better)
Translates to: HERVNRSMAASYISPLFLVVQPP*CASFIC
Trigger: ACAAATGAATGATGCACATCATGGTGGCTGGACAAC...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTCTTTTCTTCACGGTTaGCTACTGGTTCAATTACTT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNSFLHG*LLVQLL
Trigger: AAGTAATTGAACCAGTAGGCAACCGTGAAGAAAAGA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATACAGACCAATTGGCATaGTCTTCAATCACTGACATA +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYTDQLA*SSITDI
Trigger: TATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCACAGACCAATTGGCATaGTCTTCAATCACTGACATA +
Preference number: 4 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACTDQLA*SSITDI
Trigger: TATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGT...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGTCTGTTACTCAGTCCTaGGTGGGAATAGCTAAATCC +
Preference number: 4 (lower is better)
Translates to: HERVNRSMAASYISPLFLSVTQS*VGIAKS
Trigger: GGATTTAGCTATTCCCACGCAGGACTGAGTAACAGA...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCATTCTCTTGTCTTTGTaGATTCTTGGGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACILLSL*ILGLLY
Trigger: GTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAAT...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCTACTCCAAAGCCTCTTaGTCAGTTTTATCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACYSKAS*SVLSKA
Trigger: AGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTACTCCAAAGCCTCTTaGTCAGTTTTATCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYYSKAS*SVLSKA
Trigger: AGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCCAGCCACCATGATGTaGATCATTCATTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIPATMM*IIHLFH
Trigger: ATGAAACAAATGAATGATGCACATCATGGTGGCTGG...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCATATGCAATCGGTCTTTaGCTGCTGAGAGTTATTAAC +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYAYAIGL*LLRVIN
Trigger: GTTAATAACTCTCAGCAGGCAAAGACCGATTGCATA...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAATTGTGCAATTCCTATaGAATCGGTCTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQIVQFL*NRSLPA
Trigger: AGCAGGCAAAGACCGATTGCATAGGAATTGCACAAT...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATAAGGAATTAGATGTATaGTTGTCCCAAAGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNKELDV*LSQSRN
Trigger: GTTTCTGCTTTGGGACAACCATACATCTAATTCCTT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTGTAAAACAGTCCATTaGCAGTTGAGAATAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNCKTVH*QLRIKA
Trigger: AGCCTTTATTCTCAACTGCCAATGGACTGTTTTACA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGTAAAACAGTCCATTaGCAGTTGAGAATAAAGGCT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVCKTVH*QLRIKA
Trigger: AGCCTTTATTCTCAACTGCCAATGGACTGTTTTACA...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTTCTCCATTCATATATaGTGTAGCTGTGGAAATGCG +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYFSIHI*CSCGNA
Trigger: CGCATTTCCACAGCTACACCATATATGAATGGAGAA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCACATTCCACCTGGGATTaGAACAAGGTACTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSHSTWD*NKVLFE
Trigger: CTCAAAGAGTACCTTGTTCCAATCCCAGGTGGAATG...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATGGGATACAGACCAATTaGCATGCTCTTCAATCACTG +
Preference number: 4 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNGIQTN*HALQSL
Trigger: CAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCC...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATACCAAGCAATACATCTaGGCTACTTCATCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYTKQYI*ATSSLE
Trigger: TTCTAGAGATGAAGTAGCCCAGATGTATTGCTTGGT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAACCAAGCAATACATCTaGGCTACTTCATCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYATKQYI*ATSSLE
Trigger: TTCTAGAGATGAAGTAGCCCAGATGTATTGCTTGGT...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAAGCATCCATGAAATCTaGTCGCCTCATTTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSSIHEI*SPHLLN
Trigger: GTTGAGCAAATGAGGCGACCAGATTTCATGGATGCT...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATAGCATCCATGAAATCTaGTCGCCTCATTTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNSIHEI*SPHLLN
Trigger: GTTGAGCAAATGAGGCGACCAGATTTCATGGATGCT...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGTCTTTGTGCATTCTTaGGCTCCTTTACTAATCACT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYVFVHS*APLLIT
Trigger: AGTGATTAGTAAAGGAGCCCAAGAATGCACAAAGAC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATTGCTCTACTATGAGGTaGATTGAGGTCCCTAAGATC +
Preference number: 4 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYCSTMR*IEVPKI
Trigger: GATCTTAGGGACCTCAATTCACCTCATAGTAGAGCA...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCACTTTGGCAATTCTGGTaGAGATTCTACATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSLWQFW*RFYIWR
Trigger: CCTCCAAATGTAGAATCTTCACCAGAATTGCCAAAG...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGTACACAGTCATGGTTaGTTTTCAGAGTATACTTCT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYVHSHG*FSEYTS
Trigger: AGAAGTATACTCTGAAAATCAACCATGACTGTGTAC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAGTACACAGTCATGGTTaGTTTTCAGAGTATACTTCT +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYAVHSHG*FSEYTS
Trigger: AGAAGTATACTCTGAAAATCAACCATGACTGTGTAC...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATACAGTAACTCTGACATaGTGTCTGGGTTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYTVTLT*CLGSPN
Trigger: ATTGGGAGAACCCAGACATCATGTCAGAGTTACTGT...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATATTTGCATAATAGTGTaGGAATTTCGCACCACCTCA +
Preference number: 4 (lower is better)
Translates to: YSKASCSVLSKARVFRMYICIIV*EFRTTS
Trigger: TGAGGTGGTGCGAAATTCTCACACTATTATGCAAAT...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATATGATGTTACTATTGTaGCGATCTCCAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYMMLLL*RSPIPK
Trigger: TTTGGGAATTGGAGATCGTCACAATAGTAACATCAT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGATGTTACTATTGTaGCGATCTCCAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYAMMLLL*RSPIPK
Trigger: TTTGGGAATTGGAGATCGTCACAATAGTAACATCAT...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATCATCGTCTTTCACCATaGTGTTACTATTGTGACGAT +
Preference number: 4 (lower is better)
Translates to: YSKASCSVLSKARVFRMYHRLSP*CYYCDD
Trigger: ATCGTCACAATAGTAACATCATGGTGAAAGACGATG...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTTGAGAAAAGATTTATaGAGAGATTGGCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYLRKDL*RDWHAV
Trigger: GACAGCATGCCAATCTCTTCATAAATCTTTTCTCAA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATTGAGAAAAGATTTATaGAGAGATTGGCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSLRKDL*RDWHAV
Trigger: GACAGCATGCCAATCTCTTCATAAATCTTTTCTCAA...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTTTGAGAAAAGATTTATaGAGAGATTGGCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTLRKDL*RDWHAV
Trigger: GACAGCATGCCAATCTCTTCATAAATCTTTTCTCAA...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATTCGGTCTTTGCCTGCTaGGAGTTATTAACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDSVFAC*ELLTVQ
Trigger: CTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGA...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTCAAGCAATACATCTGTaGCTCCATAGAAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTQAIHL*LHRKSF
Trigger: GAAAGATTTTCTATGGAGTCACAGATGTATTGCTTG...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674622.1
CDS-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATAAATTCTTCCCTTTCTaGTTCTTGAGTAACACTTAC +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNKFFPF*FLSNTY
Trigger: GTAAGTGTTACTCAAGAAGCAGAAAGGGAAGAATTT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTCTTTTCTTCACGGTTaGCTACTGGTTCAATTACTT +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYSFLHG*LLVQLL
Trigger: AAGTAATTGAACCAGTAGGCAACCGTGAAGAAAAGA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCACAGACCAATTGGCATaGTCTTCAATCACTGACATA +
Preference number: 4 (lower is better)
Translates to: CFMKYSKASCSVLSKARVTDQLA*SSITDI
Trigger: TATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGT...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAAGTGTTAGCATATCTTaGCGTAAATCATCCCCATTT +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSSVSIS*RKSSPF
Trigger: AAATGGGGATGATTTACGGCAAGATATGCTAACACT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGAAACAGGTCAATGGCTaGATCATATATTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVKQVNG*IIYFSF
Trigger: AAAGGAGAAATATATGATGCAGCCATTGACCTGTTT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGCACCACCTCAATAAACAGGTCAATGGCTaGATCATATATTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: AAFALNLHNSVRISHHLNKQVNG*IIYFSF
Trigger: AAAGGAGAAATATATGATGCAGCCATTGACCTGTTT...ATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATATTCTCTTGTCTTTGTaGATTCTTGGGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: YSKASCSVLSKARVFRMYILLSL*ILGLLY
Trigger: GTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAAT...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGGTCTTTCGAATGTATaGAATGTCATCAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNGLSNV*NVIKRL
Trigger: CAATCTTTTGATGACATTGCATACATTCGAAAGACC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAACCAGCCACCATGATGTaGATCATTCATTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQPATMM*IIHLFH
Trigger: ATGAAACAAATGAATGATGCACATCATGGTGGCTGG...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATTATGCAATCGGTCTTTaGCTGCTGAGAGTTATTAAC +
Preference number: 4 (lower is better)
Translates to: YSKASCSVLSKARVFRMYYAIGL*LLRVIN
Trigger: GTTAATAACTCTCAGCAGGCAAAGACCGATTGCATA...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATATTGTGCAATTCCTATaGAATCGGTCTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNIVQFL*NRSLPA
Trigger: AGCAGGCAAAGACCGATTGCATAGGAATTGCACAAT...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATGCTGTTCATGGATTGTaGAATTCCTATGCAATCGGT +
Preference number: 4 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNAVHGL*NSYAIG
Trigger: ACCGATTGCATAGGAATTGCACAATCCATGAACAGC...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAAAGGAATTAGATGTATaGTTGTCCCAAAGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SKASCSVLSKARVFRMYAKELDV*LSQSRN
Trigger: GTTTCTGCTTTGGGACAACCATACATCTAATTCCTT...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAATCAAATTCACACACTaGCATGCCGATAGCAAAACC +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSIKFTH*HADSKT
Trigger: GGTTTTGCTATCGGCATGCCAGTGTGTGAATTTGAT...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCTGCTTGTCATTATTTaGAGAAACTATTACCCAGAT +
Preference number: 4 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNLLVII*RNYYPD
Trigger: ATCTGGGTAATAGTTTCTCCAAATAATGACAAGCAG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAAGCAATTACTTGTTCTaGTACACAGTCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSSNYLF*YTVMVD
Trigger: ATCAACCATGACTGTGTACCAGAACAAGTAATTGCT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTTGTAAAACAGTCCATTaGCAGTTGAGAATAAAGGCT +
Preference number: 4 (lower is better)
Translates to: CVEDPIHFCCPATMMCIICKTVH*QLRIKA
Trigger: AGCCTTTATTCTCAACTGCCAATGGACTGTTTTACA...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCGCGTCTGGAATAAGATaGCATTGTAAAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CFMKYSKASCSVLSKARVASGIR*HCKTVH
Trigger: ATGGACTGTTTTACAATGCCATCTTATTCCAGACGC...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAGCGTCTGGAATAAGATaGCATTGTAAAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQASGIR*HCKTVH
Trigger: ATGGACTGTTTTACAATGCCATCTTATTCCAGACGC...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR TCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAAACCAATTTCTCGATTaGGGATCTTTTCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSNQFLD*GSFLHG
Trigger: ACCGTGAAGAAAAGATCCTCAATCGAGAAATTGGTT...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGTACACAGTCATGGTTaGTTTTCAGAGTATACTTCT +
Preference number: 4 (lower is better)
Translates to: YSKASCSVLSKARVFRMYVHSHG*FSEYTS
Trigger: AGAAGTATACTCTGAAAATCAACCATGACTGTGTAC...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR TCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCATGATCTCATTGTTCTaGAACAGTAACTCTGACATG +
Preference number: 4 (lower is better)
Translates to: CFMKYSKASCSVLSKARVMISLF*NSNSDM
Trigger: CATGTCAGAGTTACTGTTTCAGAACAATGAGATCAT...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR TCA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGATTTGCATAATAGTGTaGGAATTTCGCACCACCTCA +
Preference number: 4 (lower is better)
Translates to: LDKPCNTSPETSQILLSLICIIV*EFRTTS
Trigger: TGAGGTGGTGCGAAATTCTCACACTATTATGCAAAT...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTAAATTCTTCCCTTTCTaGTTCTTGAGTAACACTTAC +
Preference number: 4 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIKFFPF*FLSNTY
Trigger: GTAAGTGTTACTCAAGAAGCAGAAAGGGAAGAATTT...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAGTGTTAGCATATCTTaGCGTAAATCATCCCCATTT +
Preference number: 4 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQSVSIS*RKSSPF
Trigger: AAATGGGGATGATTTACGGCAAGATATGCTAACACT...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAAAACAGGTCAATGGCTaGATCATATATTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSKQVNG*IIYFSF
Trigger: AAAGGAGAAATATATGATGCAGCCATTGACCTGTTT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGATTCTCTTGTCTTTGTaGATTCTTGGGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: HERVNRSMAASYISPLFLILLSL*ILGLLY
Trigger: GTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAAT...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGGTCTTTCGAATGTATaGAATGTCATCAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYGLSNV*NVIKRL
Trigger: CAATCTTTTGATGACATTGCATACATTCGAAAGACC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp ATTGTGACGATCTCCAATTCCCAAAATGAAGGTAGCTACACAGTATCCAGCACAGGTCTTTCGAATGTATaGAATGTCATCAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: IVTISNSQNEGSYTVSSTGLSNV*NVIKRL
Trigger: CAATCTTTTGATGACATTGCATACATTCGAAAGACC...TGTGCTGGATACTGTGTAGCTACCTTCATTTTGGGAATTGGAGATCGTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATACAGAGTTTAAATTCTaGTTAACTATCGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYTEFKF*LTIARQ
Trigger: CTGTCTTGCGATAGTTAAGCAGAATTTAAACTCTGT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR CCA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCACTGCTTGTCATTATTTaGAGAAACTATTACCCAGAT +
Preference number: 4 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSLLVII*RNYYPD
Trigger: ATCTGGGTAATAGTTTCTCCAAATAATGACAAGCAG...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTCTGGTACACAGTCATaGTTGATTTTCAGAGTATAC +
Preference number: 4 (lower is better)
Translates to: CFMKYSKASCSVLSKARVSGTQS*LIFRVY
Trigger: GTATACTCTGAAAATCAACCATGACTGTGTACCAGA...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAACCAAGCAATACATCTaGGCTACTTCATCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSTKQYI*ATSSLE
Trigger: TTCTAGAGATGAAGTAGCCCAGATGTATTGCTTGGT...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATCCAATTCAACCACAGTaGCCTTTTTGCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDPIQPQ*PFCRGH
Trigger: ATGTCCTCTGCAAAAAGGCCACTGTGGTTGAATTGG...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCCAATATCATACTGAATaGGGAAAAGCTGAAAGCACT +
Preference number: 4 (lower is better)
Translates to: CFMKYSKASCSVLSKARVQYHTE*GKAEST
Trigger: AGTGCTTTCAGCTTTTCCCCATTCAGTATGATATTG...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643187.1
CDS-3UTR TCA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGATGATCTCATTGTTCTaGAACAGTAACTCTGACATG +
Preference number: 4 (lower is better)
Translates to: LDKPCNTSPETSQILLSLMISLF*NSNSDM
Trigger: CATGTCAGAGTTACTGTTTCAGAACAATGAGATCAT...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TTGTCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAAACAGGTCAATGGCTaGATCATATATTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LSIVFHHDVTIVTISNSQKQVNG*IIYFSF
Trigger: AAAGGAGAAATATATGATGCAGCCATTGACCTGTTT...TTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCGGTCTTTCGAATGTATaGAATGTCATCAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: CFMKYSKASCSVLSKARVGLSNV*NVIKRL
Trigger: CAATCTTTTGATGACATTGCATACATTCGAAAGACC...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR GCA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATCCAGCCACCATGATGTaGATCATTCATTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYPATMM*IIHLFH
Trigger: ATGAAACAAATGAATGATGCACATCATGGTGGCTGG...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGAAGGAATTAGATGTATaGTTGTCCCAAAGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LDKPCNTSPETSQILLSLKELDV*LSQSRN
Trigger: GTTTCTGCTTTGGGACAACCATACATCTAATTCCTT...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CCA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTCTGGTACACAGTCATaGTTGATTTTCAGAGTATAC +
Preference number: 4 (lower is better)
Translates to: LDKPCNTSPETSQILLSLSGTQS*LIFRVY
Trigger: GTATACTCTGAAAATCAACCATGACTGTGTACCAGA...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR GCA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATTACTCCAAAGCCTCTTaGTCAGTTTTATCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDYSKAS*SVLSKA
Trigger: AGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCACTGCTTGTCATTATTTaGAGAAACTATTACCCAGAT +
Preference number: 4 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSLLVII*RNYYPD
Trigger: ATCTGGGTAATAGTTTCTCCAAATAATGACAAGCAG...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CCA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATAGCAATTACTTGTTCTaGTACACAGTCATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDSNYLF*YTVMVD
Trigger: ATCAACCATGACTGTGTACCAGAACAAGTAATTGCT...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS TCA 90 bp TCCTGCTTCTCGGGATACAGACCAATTGGCATGCTCTTCAATCACTaGCATATCTGGGAACTTTACCACACTGCTGAACCAGTCAAACTC +
Preference number: 5 (lower is better)
Translates to: SCFSGYRPIGMLFNH*HIWELYHTAEPVKL
Trigger: GAGTTTGACTGGTTCAGCAGTGTGGTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGAAGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTCGGGATACAGACCAATaGGCATGCTCTTCAATCACT +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESRDTDQ*ACSSIT
Trigger: AGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCG...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGCGGGATACAGACCAATaGGCATGCTCTTCAATCACT +
Preference number: 5 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVRDTDQ*ACSSIT
Trigger: AGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCG...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TCTCGGGATACAGACCAATTGGCATGCTCTTCAATCACTGACATATCTGGGAACCCACACAGTCACCGATaGACAGACAACCATAAGGTA +
Preference number: 5 (lower is better)
Translates to: SRDTDQLACSSITDISGNPHSHR*TDNHKV
Trigger: TACCTTATGGTTGTCTGTCAATCGGTGACTGTGTGG...GTTCCCAGATATGTCAGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGCCATCAACATCAAATaGGGCATCCTCCCAAGCATT +
Preference number: 5 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNAINIK*GILPSI
Trigger: AATGCTTGGGAGGATGCCCAATTTGATGTTGATGGC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGCGGGATACAGACCAATaGGCATGCTCTTCAATCACT +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVRDTDQ*ACSSIT
Trigger: AGTGATTGAAGAGCATGCCAATTGGTCTGTATCCCG...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGCCACACAGTCACCGATaGACAGACAACCATAAGGTA +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVPHSHR*TDNHKV
Trigger: TACCTTATGGTTGTCTGTCAATCGGTGACTGTGTGG...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTGTAGTGTGTGGCTGTaGAACTGCAGTGCACCTTTC +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYCSVWL*NCSAPF
Trigger: GAAAGGTGCACTGCAGTTCAACAGCCACACACTACA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTTGTAGTGTGTGGCTGTaGAACTGCAGTGCACCTTTC +
Preference number: 5 (lower is better)
Translates to: CVEDPIHFCCPATMMCIICSVWL*NCSAPF
Trigger: GAAAGGTGCACTGCAGTTCAACAGCCACACACTACA...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTAATCGGCCATGTGGTTaGTGCATTTTAATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESNRPCG*CILMVE
Trigger: CTCCACCATTAAAATGCACAAACCACATGGCCGATT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATATTCTACTAGGATTCTaGGGGGCATCAAGTGGATGC +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYILLGF*GASSGC
Trigger: GCATCCACTTGATGCCCCCAAGAATCCTAGTAGAAT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAATTCTACTAGGATTCTaGGGGGCATCAAGTGGATGC +
Preference number: 5 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSILLGF*GASSGC
Trigger: GCATCCACTTGATGCCCCCAAGAATCCTAGTAGAAT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGCCATCAACATCAAATaGGGCATCCTCCCAAGCATT +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYAINIK*GILPSI
Trigger: AATGCTTGGGAGGATGCCCAATTTGATGTTGATGGC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTACAGACAGAAGCAATTaGGGTAGAATTTCGGGGATA +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESTDRSN*GRISGI
Trigger: TATCCCCGAAATTCTACCCAAATTGCTTCTGTCTGT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGACAGACAGAAGCAATTaGGGTAGAATTTCGGGGATA +
Preference number: 5 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVTDRSN*GRISGI
Trigger: TATCCCCGAAATTCTACCCAAATTGCTTCTGTCTGT...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTGTAGTGTGTGGCTGTaGAACTGCAGTGCACCTTTC +
Preference number: 5 (lower is better)
Translates to: CFMKYSKASCSVLSKARVCSVWL*NCSAPF
Trigger: GAAAGGTGCACTGCAGTTCAACAGCCACACACTACA...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTCCAATCCATTTTTGTaGTCCAGCCACCATGATGTG +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVSNPFL*SSHHDV
Trigger: CACATCATGGTGGCTGGACAACAAAAATGGATTGGA...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS TCA 90 bp CATGCTCTTCAATCACTGACATATCTGGGAACTTTACCACACTGCTaGACCAGTCAAACTCCAACTCTAAGCATGGAGTTTCCTAAGAGA +
Preference number: 5 (lower is better)
Translates to: HALQSLTYLGTLPHC*TSQTPTLSMEFPKR
Trigger: TCTCTTAGGAAACTCCATGCTTAGAGTTGGAGTTTGACTGGTTCAGCAGTGTGGTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS CCA 90 bp TCTCTTTATTCTGTCTACATTCTTCAAATACCACTCTTAGTACCTTaGGCCGGCCATCAATATTTCTTGTCTGGACCACTGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SLYSVYILQIPLLVP*AGHQYFLSGPLQRP
Trigger: AGGCCTTTGCAGTGGTCCAGACAAGAAATATTGATGGCCGGCCCAAGGTACTAAGAGTGGTATTTGAAGAATGTAGACAGAATAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGAATTAGATGTATGGTaGTCCCAAAGCAGAAACGCT +
Preference number: 5 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNELDVW*SQSRNA
Trigger: AGCGTTTCTGCTTTGGGACAACCATACATCTAATTC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263967.4
ENST00000643187.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGGTAAGAAGATTCATCTaGAAGAAGTTGATGGAGGGG +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVVRRFI*KKLMEG
Trigger: CCCCTCCATCAACTTCTTCAAGATGAATCTTCTTAC...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTATCTTTTCTTCACGGTaGCCTACTGGTTCAATTACT +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESIFSSR*PTGSIT
Trigger: AGTAATTGAACCAGTAGGCAACCGTGAAGAAAAGAT...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGAGGATAGACATACATaGCTCTACTATGAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESEDRHT*LYYEVN
Trigger: ATTCACCTCATAGTAGAGCAATGTATGTCTATCCTC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTGGTACACAGTCATGGTaGATTTTCAGAGTATACTTC +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESGTQSW*IFRVYF
Trigger: GAAGTATACTCTGAAAATCAACCATGACTGTGTACC...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GAACTGCAGTGCACCTTTCAAGCCGCCTTTGCACTGAATTTGCATAATAGTGTGGGTACACAGTCATGGTaGATTTTCAGAGTATACTTC +
Preference number: 5 (lower is better)
Translates to: ELQCTFQAAFALNLHNSVGTQSW*IFRVYF
Trigger: GAAGTATACTCTGAAAATCAACCATGACTGTGTACC...CACACTATTATGCAAATTCAGTGCAAAGGCGGCTTGAAAGGTGCACTGCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp GCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGCACCACCTCAATGGAACAAGGTACTCTTaGAGTGTTCACATTGTCACA +
Preference number: 5 (lower is better)
Translates to: AAFALNLHNSVRISHHLNGTRYS*SVHIVT
Trigger: TGTGACAATGTGAACACTCAAAGAGTACCTTGTTCC...ATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCCCACACAGTCACCGATaGACAGACAACCATAAGGTA +
Preference number: 5 (lower is better)
Translates to: CFMKYSKASCSVLSKARVPHSHR*TDNHKV
Trigger: TACCTTATGGTTGTCTGTCAATCGGTGACTGTGTGG...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCATGTAGTGTGTGGCTGTaGAACTGCAGTGCACCTTTC +
Preference number: 5 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSCSVWL*NCSAPF
Trigger: GAAAGGTGCACTGCAGTTCAACAGCCACACACTACA...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGTCTTTGTGCATTCTaGGGCTCCTTTACTAATCAC +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVCLCAF*GSFTNH
Trigger: GTGATTAGTAAAGGAGCCCAAGAATGCACAAAGACA...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATCAAATTCTCTTGTCTTaGTGCATTCTTGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNQILLS*CILGLL
Trigger: AAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTG...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTTCCAATCCATTTTTGTaGTCCAGCCACCATGATGTG +
Preference number: 5 (lower is better)
Translates to: CVEDPIHFCCPATMMCIISNPFL*SSHHDV
Trigger: CACATCATGGTGGCTGGACAACAAAAATGGATTGGA...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCTCCAATCCATTTTTGTaGTCCAGCCACCATGATGTG +
Preference number: 5 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACSNPFL*SSHHDV
Trigger: CACATCATGGTGGCTGGACAACAAAAATGGATTGGA...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp ATTGTGACGATCTCCAATTCCCAAAATGAAGGTAGCTACACAGTATCCAGCACAGAATTAGATGTATGGTaGTCCCAAAGCAGAAACCCC +
Preference number: 5 (lower is better)
Translates to: IVTISNSQNEGSYTVSSTELDVW*SQSRNP
Trigger: GGGGTTTCTGCTTTGGGACAACCATACATCTAATTC...TGTGCTGGATACTGTGTAGCTACCTTCATTTTGGGAATTGGAGATCGTCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATATTCTACTAGGATTCTaGGGGGCATCAAGTGGATGC +
Preference number: 5 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNILLGF*GASSGC
Trigger: GCATCCACTTGATGCCCCCAAGAATCCTAGTAGAAT...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTTCATCTTGAAGAAGTaGATGGAGGGGGTATTTTCT +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVFILKK*MEGVFS
Trigger: AGAAAATACCCCCTCCATCAACTTCTTCAAGATGAA...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTTCCCTTTCTGCTTCTaGAGTAACACTTACGAAAAT +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESFPFCF*SNTYEN
Trigger: ATTTTCGTAAGTGTTACTCAAGAAGCAGAAAGGGAA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGATCTTTTCTTCACGGTaGCCTACTGGTTCAATTACT +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVIFSSR*PTGSIT
Trigger: AGTAATTGAACCAGTAGGCAACCGTGAAGAAAAGAT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGAAACCAATTTCTCGATaGAGGATCTTTTCTTCACGG +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVKPISR*RIFSSR
Trigger: CCGTGAAGAAAAGATCCTCAATCGAGAAATTGGTTT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGAGGATAGACATACATaGCTCTACTATGAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNEDRHT*LYYEVN
Trigger: ATTCACCTCATAGTAGAGCAATGTATGTCTATCCTC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTCTGCTTGTCATTATTaGGAGAAACTATTACCCAGA +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSACHY*EKLLPR
Trigger: TCTGGGTAATAGTTTCTCCAAATAATGACAAGCAGA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGGCCATCAACATCAAATaGGGCATCCTCCCAAGCATT +
Preference number: 5 (lower is better)
Translates to: LDKPCNTSPETSQILLSLAINIK*GILPSI
Trigger: AATGCTTGGGAGGATGCCCAATTTGATGTTGATGGC...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATACAGTCCATTGGCAGTaGAGAATAAAGGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNTVHWQ*RIKAFF
Trigger: AAAGAAAGCCTTTATTCTCAACTGCCAATGGACTGT...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGACAGTCCATTGGCAGTaGAGAATAAAGGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVTVHWQ*RIKAFF
Trigger: AAAGAAAGCCTTTATTCTCAACTGCCAATGGACTGT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATGGAACAAGGTACTCTTaGAGTGTTCACATTGTCACA +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYGTRYS*SVHIVT
Trigger: TGTGACAATGTGAACACTCAAAGAGTACCTTGTTCC...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCTGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTCGAAGATCAAGACCTaGATTTTGCCAGATATTTTC +
Preference number: 5 (lower is better)
Translates to: CCSWIVQFLCNRSLPAESSKIKT*ILPDIF
Trigger: GAAAATATCTGGCAAAATCAAGGTCTTGATCTTCGA...ACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCATCGTCTTTCACCATGATGTTACTATTGTGACGATCTCCAATTCCCAAAATCCACACAGTCACCGATaGACAGACAACCATAAGGTA +
Preference number: 5 (lower is better)
Translates to: SIVFHHDVTIVTISNSQNPHSHR*TDNHKV
Trigger: TACCTTATGGTTGTCTGTCAATCGGTGACTGTGTGG...ATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGAAAGACGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATGTCTTTGTGCATTCTaGGGCTCCTTTACTAATCAC +
Preference number: 5 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSCLCAF*GSFTNH
Trigger: GTGATTAGTAAAGGAGCCCAAGAATGCACAAAGACA...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATCAAATTCTCTTGTCTTaGTGCATTCTTGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYQILLS*CILGLL
Trigger: AAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTG...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCACAAATTCTCTTGTCTTaGTGCATTCTTGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SKASCSVLSKARVFRMYAQILLS*CILGLL
Trigger: AAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTG...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATACCTCTCAAATTCTCTaGTCTTTGTGCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYTSQIL*SLCILG
Trigger: CCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTACCTCTCAAATTCTCTaGTCTTTGTGCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTTSQIL*SLCILG
Trigger: CCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGT...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTACCTCTCAAATTCTCTaGTCTTTGTGCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: CVEDPIHFCCPATMMCIITSQIL*SLCILG
Trigger: CCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGT...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGAGATTTATGAAGAGATaGGCATGCTGTCGAATAGCT +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVRFMKR*ACCRIA
Trigger: AGCTATTCGACAGCATGCCAATCTCTTCATAAATCT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GCCGCCTTTGCACTGAATTTGCATAATAGTGTGAGAATTTCGCACCACCTCAATAGATTTATGAAGAGATaGGCATGCTGTCGAATAGCT +
Preference number: 5 (lower is better)
Translates to: AAFALNLHNSVRISHHLNRFMKR*ACCRIA
Trigger: AGCTATTCGACAGCATGCCAATCTCTTCATAAATCT...ATTGAGGTGGTGCGAAATTCTCACACTATTATGCAAATTCAGTGCAAAGGCGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATAGATCCAATCCATTTTaGTTGTCCAGCCACCATGAT +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYRSNPF*LSSHHD
Trigger: ATCATGGTGGCTGGACAACAAAAATGGATTGGATCT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCAAGATCCAATCCATTTTaGTTGTCCAGCCACCATGAT +
Preference number: 5 (lower is better)
Translates to: ASCSVLSKARVFRMYAMSRSNPF*LSSHHD
Trigger: ATCATGGTGGCTGGACAACAAAAATGGATTGGATCT...TGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAAGATCCAATCCATTTTaGTTGTCCAGCCACCATGAT +
Preference number: 5 (lower is better)
Translates to: SKASCSVLSKARVFRMYARSNPF*LSSHHD
Trigger: ATCATGGTGGCTGGACAACAAAAATGGATTGGATCT...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGAACTCTCAAATTCTCTaGTCTTTGTGCATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: CNSYAIGLCLLRVINSAVNSQIL*SLCILG
Trigger: CCCAAGAATGCACAAAGACAAGAGAATTTGAGAGTT...CACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643187.1
CDS TCA 90 bp CATGCTCTTCAATCACTGACATATCTGGGAACTTTACCACACTGCTaGACCAGTCAAACTCCAACTCTAAGCATGGAGTTTCTTTATTTG +
Preference number: 5 (lower is better)
Translates to: HALQSLTYLGTLPHC*TSQTPTLSMEFLYL
Trigger: CAAATAAAGAAACTCCATGCTTAGAGTTGGAGTTTGACTGGTTCAGCAGTGTGGTAAAGTTCCCAGATATGTCAGTGATTGAAGAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
CDS-3UTR CAA 90 bp TCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAAAACCAATTTCTCGATaGAGGATCTTTTCTTCACGG +
Preference number: 5 (lower is better)
Translates to: SKASCSVLSKARVFRMYAKPISR*RIFSSR
Trigger: CCGTGAAGAAAAGATCCTCAATCGAGAAATTGGTTT...TGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATAAACCAATTTCTCGATaGAGGATCTTTTCTTCACGG +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYKPISR*RIFSSR
Trigger: CCGTGAAGAAAAGATCCTCAATCGAGAAATTGGTTT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGGAACAAGGTACTCTTaGAGTGTTCACATTGTCACA +
Preference number: 5 (lower is better)
Translates to: YSKASCSVLSKARVFRMYGTRYS*SVHIVT
Trigger: TGTGACAATGTGAACACTCAAAGAGTACCTTGTTCC...ATACATTCGAAAGACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATTCGAAGATCAAGACCTaGATTTTGCCAGATATTTTC +
Preference number: 5 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNSKIKT*ILPDIF
Trigger: GAAAATATCTGGCAAAATCAAGGTCTTGATCTTCGA...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTAACAGTGCAGTGTGGAATGCCTTTGCACTGAATTaGCATAATAGTGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: SYAIGLCLLRVINSAVWNAFALN*HNSVRI
Trigger: AATTCTCACACTATTATGCAAATTCAGTGCAAAGGC...ATTCCACACTGCACTGTTAATAACTCTCAGCAGGCAAAGACCGATTGCATAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTAATGCTGTTCATGGATaGTGCAATTCCTATGCAATC +
Preference number: 5 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTNAVHG*CNSYAI
Trigger: GATTGCATAGGAATTGCACAATCCATGAACAGCATT...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATAATTATTGCACTTTTTaGATGTGGCACCTGGACATC +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYNYCTF*MWHLDI
Trigger: GATGTCCAGGTGCCACATCAAAAAAGTGCAATAATT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS TCA 90 bp AGATTCTACATTTGGAGGATAGACATACATTGCTCTACTATGAGGTaGATTGAGGTCCCTAAGATCCACAGCTTCTTTACAAACGTTCAG +
Preference number: 5 (lower is better)
Translates to: RFYIWRIDIHCSTMR*IEVPKIHSFFTNVQ
Trigger: CTGAACGTTTGTAAAGAAGCTGTGGATCTTAGGGACCTCAATTCACCTCATAGTAGAGCAATGTATGTCTATCCTCCAAATGTAGAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS CCA 90 bp TCCATTCATATATGGTGTAGCTGTGGAAATGCGTCTGGAATAAGATaGCATTGTAAAACAGTCCATTGGCAGTTGAGAATAAAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SIHIWCSCGNASGIR*HCKTVHWQLRIKAF
Trigger: GAAAGCCTTTATTCTCAACTGCCAATGGACTGTTTTACAATGCCATCTTATTCCAGACGCATTTCCACAGCTACACCATATATGAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAGTAAGAAGATTCATCTaGAAGAAGTTGATGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSVRRFI*KKLMEG
Trigger: CCCCTCCATCAACTTCTTCAAGATGAATCTTCTTAC...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGGTAAGAAGATTCATCTaGAAGAAGTTGATGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LDKPCNTSPETSQILLSLVRRFI*KKLMEG
Trigger: CCCCTCCATCAACTTCTTCAAGATGAATCTTCTTAC...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp ATTGTGACGATCTCCAATTCCCAAAATGAAGGTAGCTACACAGTATCCAGCACATTCCCTTTCTGCTTCTaGAGTAACACTTACGAAAAT +
Preference number: 5 (lower is better)
Translates to: IVTISNSQNEGSYTVSSTFPFCF*SNTYEN
Trigger: ATTTTCGTAAGTGTTACTCAAGAAGCAGAAAGGGAA...TGTGCTGGATACTGTGTAGCTACCTTCATTTTGGGAATTGGAGATCGTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTCTGCTTGTCATTATTaGGAGAAACTATTACCCAGA +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYSACHY*EKLLPR
Trigger: TCTGGGTAATAGTTTCTCCAAATAATGACAAGCAGA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTCGAAGATCAAGACCTaGATTTTGCCAGATATTTTC +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYSKIKT*ILPDIF
Trigger: GAAAATATCTGGCAAAATCAAGGTCTTGATCTTCGA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp GGCATTCCAGAGCCAAGCATCATTGAGAAAAGATTTATGAAGAGATTGGCATGCGCCTTTGCACTGAATTaGCATAATAGTGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: GIPEPSIIEKRFMKRLACAFALN*HNSVRI
Trigger: AATTCTCACACTATTATGCAAATTCAGTGCAAAGGC...GCATGCCAATCTCTTCATAAATCTTTTCTCAATGATGCTTGGCTCTGGAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATATCTATATGAAACAGTaGTCCATCGTCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYIYMKQ*SIVFHH
Trigger: ATGGTGAAAGACGATGGACAACTGTTTCATATAGAT...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTGTGGAAGATCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTATCTATATGAAACAGTaGTCCATCGTCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: CVEDPIHFCCPATMMCIIIYMKQ*SIVFHH
Trigger: ATGGTGAAAGACGATGGACAACTGTTTCATATAGAT...AATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGATCTTCCACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp CTCCTGAAACCTCTCAAATTCTCTTGTCTTTGTGCATTCTTGGGCTCCTTTACTATCTATATGAAACAGTaGTCCATCGTCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: LLKPLKFSCLCAFLGSFTIYMKQ*SIVFHH
Trigger: ATGGTGAAAGACGATGGACAACTGTTTCATATAGAT...AGTAAAGGAGCCCAAGAATGCACAAAGACAAGAGAATTTGAGAGGTTTCAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp CTAGATAAGCCTTGTAACACATCTCCTGAAACCTCTCAAATTCTCTTGTCTTTGAGATCCAATCCATTTTaGTTGTCCAGCCACCATGAT +
Preference number: 5 (lower is better)
Translates to: LDKPCNTSPETSQILLSLRSNPF*LSSHHD
Trigger: ATCATGGTGGCTGGACAACAAAAATGGATTGGATCT...CAAAGACAAGAGAATTTGAGAGGTTTCAGGAGATGTGTTACAAGGCTTATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTTCATGAAATACTCCAAAGCCTCTTGCTCAGTTTTATCTAAGGCTAGGGTCAATGCTGTTCATGGATaGTGCAATTCCTATGCAATC +
Preference number: 5 (lower is better)
Translates to: CFMKYSKASCSVLSKARVNAVHG*CNSYAI
Trigger: GATTGCATAGGAATTGCACAATCCATGAACAGCATT...GACCCTAGCCTTAGATAAAACTGAGCAAGAGGCTTTGGAGTATTTCATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TGTTCATGGATTGTGCAATTCCTATGCAATCGGTCTTTGCCTGCTGAGAGTTATTCAATGTTTGGTTCTTaGCCTCATTTCTTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: CSWIVQFLCNRSLPAESYSMFGS*PHFFLR
Trigger: CCTAAGAAAGAAATGAGGCAAAGAACCAAACATTGA...ATAACTCTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263967.4
CDS TCA 90 bp TTTGATCCAGTAACACCAATAGGGTTCAGCAAATCTTCTAATCCATaGGGTACTGGCCAAAGATTCAAAGCCATTTTTCCAGATACTAGA +
Preference number: 5 (lower is better)
Translates to: FDPVTPIGFSKSSNP*GTGQRFKAIFPDTR
Trigger: TCTAGTATCTGGAAAAATGGCTTTGAATCTTTGGCCAGTACCTCATGGATTAGAAGATTTGCTGAACCCTATTGGTGTTACTGGATCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
ENST00000675786.1
CDS TCA 90 bp GCTAGTTCAGCTCACAACTCAAATAATCCCACAAATGTTTCCCTTTaGTACAACCATAATACTTGGGATGTGGCACAAATGCTTTTTAGG +
Preference number: 5 (lower is better)
Translates to: ASSAHNSNNPTNVSL*YNHNTWDVAQMLFR
Trigger: CCTAAAAAGCATTTGTGCCACATCCCAAGTATTATGGTTGTATCAAAGGGAAACATTTGTGGGATTATTTGAGTTGTGAGCTGAACTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675796.1
CDS GCA 90 bp CTAACATTCAGATTGACACGTAAGTATCCAAAGTTTGGTTTTCCTTaGTCTGTTCTTCTCGTAAGCTACTCTCCATATTTTCCACCTTTC +
Preference number: 5 (lower is better)
Translates to: LTFRLTRKYPKFGFP*SVLLVSYSPYFPPF
Trigger: GAAAGGTGGAAAATATGGAGAGTAGCTTACGAGAAGAACAGAGCAAGGAAAACCAAACTTTGGATACTTACGTGTCAATCTGAATGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675796.1
CDS-3UTR CAA 90 bp CATGAACGTGTAAACAGGTCAATGGCTGCATCATATATTTCTCCTTTGTTCTTGACAGTCCATTGGCAGTaGAGAATAAAGGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: HERVNRSMAASYISPLFLTVHWQ*RIKAFF
Trigger: AAAGAAAGCCTTTATTCTCAACTGCCAATGGACTGT...CAAGAACAAAGGAGAAATATATGATGCAGCCATTGACCTGTTTACACGTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAAGATTTATGAAGAGATaGGCATGCTGTCGAATAGCT +
Preference number: 5 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSRFMKR*ACCRIA
Trigger: AGCTATTCGACAGCATGCCAATCTCTTCATAAATCT...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATTCCAATCCATTTTTGTaGTCCAGCCACCATGATGTG +
Preference number: 5 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDSNPFL*SSHHDV
Trigger: CACATCATGGTGGCTGGACAACAAAAATGGATTGGA...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAAATGCTGTTCATGGATaGTGCAATTCCTATGCAATC +
Preference number: 5 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSNAVHG*CNSYAI
Trigger: GATTGCATAGGAATTGCACAATCCATGAACAGCATT...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATGAGGATAGACATACATaGCTCTACTATGAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYEDRHT*LYYEVN
Trigger: ATTCACCTCATAGTAGAGCAATGTATGTCTATCCTC...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCATCTGCTTGTCATTATTaGGAGAAACTATTACCCAGA +
Preference number: 5 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSSACHY*EKLLPR
Trigger: TCTGGGTAATAGTTTCTCCAAATAATGACAAGCAGA...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCCAATCCATTTTTGTTGTCCAGCCACCATGATGTGCATCATTCATTTGTTTCAATCTATATGAAACAGTaGTCCATCGTCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: SNPFLLSSHHDVHHSFVSIYMKQ*SIVFHH
Trigger: ATGGTGAAAGACGATGGACAACTGTTTCATATAGAT...TGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATTGTCTTTGTGCATTCTaGGGCTCCTTTACTAATCAC +
Preference number: 5 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDCLCAF*GSFTNH
Trigger: GTGATTAGTAAAGGAGCCCAAGAATGCACAAAGACA...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643187.1
ENST00000674622.1
ENST00000675786.1
CDS-3UTR CAA 90 bp ACAGACAACCATAAGGTAACATTCGAAGATCAAGACCTTGATTTTGCCAGATATGCCTTTGCACTGAATTaGCATAATAGTGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: TDNHKVTFEDQDLDFARYAFALN*HNSVRI
Trigger: AATTCTCACACTATTATGCAAATTCAGTGCAAAGGC...ATATCTGGCAAAATCAAGGTCTTGATCTTCGAATGTTACCTTATGGTTGTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674622.1
ENST00000675786.1
CDS CCA 90 bp ACAGTCATGGTTGATTTTCAGAGTATACTTCTGCTTGTCATTATTTaGAGAAACTATTACCCAGATCACCACTATTATTTGCCCTTTATC +
Preference number: 5 (lower is better)
Translates to: TVMVDFQSILLLVII*RNYYPDHHYYLPFI
Trigger: GATAAAGGGCAAATAATAGTGGTGATCTGGGTAATAGTTTCTCCAAATAATGACAAGCAGAAGTATACTCTGAAAATCAACCATGACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS CCA 90 bp TTTTTCCTGATTGCTTCAGCAATTACTTGTTCTGGTACACAGTCATaGTTGATTTTCAGAGTATACTTCTGCTTGTCATTATTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: FFLIASAITCSGTQS*LIFRVYFCLSLFGE
Trigger: TTCTCCAAATAATGACAAGCAGAAGTATACTCTGAAAATCAACCATGACTGTGTACCAGAACAAGTAATTGCTGAAGCAATCAGGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS-3UTR CAA 90 bp TCAGTTTTATCTAAGGCTAGGGTCTTTCGAATGTATGCAATGTCATCAAAAGATTTCCCTTTCTGCTTCTaGAGTAACACTTACGAAAAT +
Preference number: 5 (lower is better)
Translates to: SVLSKARVFRMYAMSSKDFPFCF*SNTYEN
Trigger: ATTTTCGTAAGTGTTACTCAAGAAGCAGAAAGGGAA...ATCTTTTGATGACATTGCATACATTCGAAAGACCCTAGCCTTAGATAAAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643187.1
ENST00000675786.1
CDS GCA 72 bp TTCAAAACATCGTTCCGAAAACCCAGGTCCTGCATGTaGACAAAGGCGCAGTGCTGGAATGAGGAAGCTTCA +
Preference number: 6 (lower is better)
Translates to: FKTSFRKPRSCM*TKAQCWNEEAS
Trigger: TGAAGCTTCCTCATTCCAGCACTGCGCCTTTGTGCACATGCAGGACCTGGGTTTTCGGAACGATGTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468036.1
CDS CAA 72 bp TCATTCCATTTGGTAGTAAACATTCTACTAGGATTCTaGGGGGCATCAAGTGGATGCCCCACAGTTCACCTG +
Preference number: 6 (lower is better)
Translates to: SFHLVVNILLGF*GASSGCPTVHL
Trigger: CAGGTGAACTGTGGGGCATCCACTTGATGCCCCCAAGAATCCTAGTAGAATGTTTACTACCAAATGGAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000468036.1
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS CAA 90 bp AAGTCACTATCATTCCATTTGGTAGTAAACATTCTACTAGGATTCTaGGGGGCATCAAGTGGATGCCCCACAGTTCACCTGATGATGGTC +
Preference number: 6 (lower is better)
Translates to: KSLSFHLVVNILLGF*GASSGCPTVHLMMV
Trigger: GACCATCATCAGGTGAACTGTGGGGCATCCACTTGATGCCCCCAAGAATCCTAGTAGAATGTTTACTACCAAATGGAATGATAGTGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000468036.1
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS CAA 90 bp CTCTCTTTATTCTGTCTACATTCTTCAAATACCACTCTTAGTACCTaGGGCCGGCCATCAATATTTCTTGTCTGGACCACTGCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: LSLFCLHSSNTTLST*GRPSIFLVWTTAKA
Trigger: GGCCTTTGCAGTGGTCCAGACAAGAAATATTGATGGCCGGCCCAAGGTACTAAGAGTGGTATTTGAAGAATGTAGACAGAATAAAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS CAA 90 bp ACAGGCCTTATTCTTTTAACCCCCTTGAAGCCCTGGCCCTACAAATaGTCAATCACTTCCTCTAGTACTCCAACTTCCTTTGATGACTTC +
Preference number: 6 (lower is better)
Translates to: TGLILLTPLKPWPYK*SITSSSTPTSFDDF
Trigger: GAAGTCATCAAAGGAAGTTGGAGTACTAGAGGAAGTGATTGACAATTTGTAGGGCCAGGGCTTCAAGGGGGTTAAAAGAATAAGGCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675796.1
CDS GCA 72 bp ATGACACTATTTGCTTATGCACCAAAAGTGCATTGGTaGTGTCCCCAGGACTATGTTGGATGTGGGAATCTA +
Preference number: 6 (lower is better)
Translates to: MTLFAYAPKVHW*CPQDYVGCGNL
Trigger: TAGATTCCCACATCCAACATAGTCCTGGGGACAGCACCAATGCACTTTTGGTGCATAAGCAAATAGTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS CCA 72 bp TCTGTCTACATTCTTCAAATACCACTCTTAGTACCTTaGGCCGGCCATCAATATTTCTTGTCTGGACCACTG +
Preference number: 6 (lower is better)
Translates to: SVYILQIPLLVP*AGHQYFLSGPL
Trigger: CAGTGGTCCAGACAAGAAATATTGATGGCCGGCCCAAGGTACTAAGAGTGGTATTTGAAGAATGTAGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS TCA 72 bp CAATCACTGACATATCTGGGAACTTTACCACACTGCTaGACCAGTCAAACTCCAACTCTAAGCATGGAGTTT +
Preference number: 6 (lower is better)
Translates to: QSLTYLGTLPHC*TSQTPTLSMEF
Trigger: AAACTCCATGCTTAGAGTTGGAGTTTGACTGGTTCAGCAGTGTGGTAAAGTTCCCAGATATGTCAGTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
ENST00000675786.1
CDS CAA 72 bp TTCTGTCTACATTCTTCAAATACCACTCTTAGTACCTaGGGCCGGCCATCAATATTTCTTGTCTGGACCACT +
Preference number: 6 (lower is better)
Translates to: FCLHSSNTTLST*GRPSIFLVWTT
Trigger: AGTGGTCCAGACAAGAAATATTGATGGCCGGCCCAAGGTACTAAGAGTGGTATTTGAAGAATGTAGACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS CAA 72 bp ATAAATGACACTATTTGCTTATGCACCAAAAGTGCATaGGTGCTGTCCCCAGGACTATGTTGGATGTGGGAA +
Preference number: 6 (lower is better)
Translates to: INDTICLCTKSA*VLSPGLCWMWE
Trigger: TTCCCACATCCAACATAGTCCTGGGGACAGCACCAATGCACTTTTGGTGCATAAGCAAATAGTGTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS CAA 90 bp GTAAGAGCTATAAATGACACTATTTGCTTATGCACCAAAAGTGCATaGGTGCTGTCCCCAGGACTATGTTGGATGTGGGAATCTAATGAC +
Preference number: 6 (lower is better)
Translates to: VRAINDTICLCTKSA*VLSPGLCWMWESND
Trigger: GTCATTAGATTCCCACATCCAACATAGTCCTGGGGACAGCACCAATGCACTTTTGGTGCATAAGCAAATAGTGTCATTTATAGCTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS CAA 90 bp CCACCTCATAGCCAGTGTGACTTAAAGAGAGCAAGAGGGCCTAATTaGATTAGACATTTATGCTGTACCAATTCTTGGTTGCAAACAAAT +
Preference number: 6 (lower is better)
Translates to: PPHSQCDLKRARGPN*IRHLCCTNSWLQTN
Trigger: ATTTGTTTGCAACCAAGAATTGGTACAGCATAAATGTCTAATCAAATTAGGCCCTCTTGCTCTCTTTAAGTCACACTGGCTATGAGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS TCA 72 bp ATTTGGAGGATAGACATACATTGCTCTACTATGAGGTaGATTGAGGTCCCTAAGATCCACAGCTTCTTTACA +
Preference number: 6 (lower is better)
Translates to: IWRIDIHCSTMR*IEVPKIHSFFT
Trigger: TGTAAAGAAGCTGTGGATCTTAGGGACCTCAATTCACCTCATAGTAGAGCAATGTATGTCTATCCTCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS TCA 72 bp GTAACACCAATAGGGTTCAGCAAATCTTCTAATCCATaGGGTACTGGCCAAAGATTCAAAGCCATTTTTCCA +
Preference number: 6 (lower is better)
Translates to: VTPIGFSKSSNP*GTGQRFKAIFP
Trigger: TGGAAAAATGGCTTTGAATCTTTGGCCAGTACCTCATGGATTAGAAGATTTGCTGAACCCTATTGGTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
ENST00000675786.1
CDS CCA 72 bp ATATGGTGTAGCTGTGGAAATGCGTCTGGAATAAGATaGCATTGTAAAACAGTCCATTGGCAGTTGAGAATA +
Preference number: 6 (lower is better)
Translates to: IWCSCGNASGIR*HCKTVHWQLRI
Trigger: TATTCTCAACTGCCAATGGACTGTTTTACAATGCCATCTTATTCCAGACGCATTTCCACAGCTACACCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
ENST00000675786.1
CDS CCA 72 bp AAAGCACATAATGCGGTCATCAAGTTTGGGGTGGGATaGTTTCCCATAGTAGGAAACATAAACTTAATCCTT +
Preference number: 6 (lower is better)
Translates to: KAHNAVIKFGVG*FPIVGNINLIL
Trigger: AAGGATTAAGTTTATGTTTCCTACTATGGGAAACCATCCCACCCCAAACTTGATGACCGCATTATGTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675467.1
CDS CAA 90 bp AATGCGTCTGGAATAAGATGGCATTGTAAAACAGTCCATTGGCAGTaGAGAATAAAGGCTTTCTTTAGCCATCAACATCAAATTGGGCAT +
Preference number: 6 (lower is better)
Translates to: NASGIRWHCKTVHWQ*RIKAFFSHQHQIGH
Trigger: ATGCCCAATTTGATGTTGATGGCTAAAGAAAGCCTTTATTCTCAACTGCCAATGGACTGTTTTACAATGCCATCTTATTCCAGACGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000674534.1
ENST00000675467.1
ENST00000675786.1
CDS TCA 72 bp TTGGTCTCAGGACTCCTTTACACTTGTAGAAATTACTaGGGACTCCAAAGAGCTTTTAGTTATGTGAATTAC +
Preference number: 6 (lower is better)
Translates to: LVSGLLYTCRNY*GLQRAFSYVNY
Trigger: GTAATTCACATAACTAAAAGCTCTTTGGAGTCCTCAGTAATTTCTACAAGTGTAAAGGAGTCCTGAGACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675796.1
CDS GCA 72 bp AGATTGACACGTAAGTATCCAAAGTTTGGTTTTCCTTaGTCTGTTCTTCTCGTAAGCTACTCTCCATATTTT +
Preference number: 6 (lower is better)
Translates to: RLTRKYPKFGFP*SVLLVSYSPYF
Trigger: AAAATATGGAGAGTAGCTTACGAGAAGAACAGAGCAAGGAAAACCAAACTTTGGATACTTACGTGTCAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675796.1
CDS CAA 72 bp CATCGAAATAAAACTGTAGGGCAGAAGTTCTCAATTTaGGTCTCAGGACTCCTTTACACTTGTAGAAATTAC +
Preference number: 6 (lower is better)
Translates to: HRNKTVGQKFSI*VSGLLYTCRNY
Trigger: GTAATTTCTACAAGTGTAAAGGAGTCCTGAGACCAAAATTGAGAACTTCTGCCCTACAGTTTTATTTCGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675796.1
CDS CAA 90 bp TTCCTGATTGCTTCAGCAATTACTTGTTCTGGTACACAGTCATGGTaGATTTTCAGAGTATACTTCTGCTTGTCATTATTTGGAGAAACT +
Preference number: 6 (lower is better)
Translates to: FLIASAITCSGTQSW*IFRVYFCLSLFGET
Trigger: AGTTTCTCCAAATAATGACAAGCAGAAGTATACTCTGAAAATCAACCATGACTGTGTACCAGAACAAGTAATTGCTGAAGCAATCAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS CAA 90 bp TGTTCTGGTACACAGTCATGGTTGATTTTCAGAGTATACTTCTGCTaGTCATTATTTGGAGAAACTATTACCCAGATCACCACTATTATT +
Preference number: 6 (lower is better)
Translates to: CSGTQSWLIFRVYFC*SLFGETITQITTII
Trigger: AATAATAGTGGTGATCTGGGTAATAGTTTCTCCAAATAATGACAAGCAGAAGTATACTCTGAAAATCAACCATGACTGTGTACCAGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS TCA 72 bp CTTCAGCAATTACTTGTTCTGGTACACAGTCATGGTTaGTTTTCAGAGTATACTTCTGCTTGTCATTATTTG +
Preference number: 6 (lower is better)
Translates to: LQQLLVLVHSHG*FSEYTSACHYL
Trigger: CAAATAATGACAAGCAGAAGTATACTCTGAAAATCAACCATGACTGTGTACCAGAACAAGTAATTGCTGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS CCA 72 bp ATTGCTTCAGCAATTACTTGTTCTGGTACACAGTCATaGTTGATTTTCAGAGTATACTTCTGCTTGTCATTA +
Preference number: 6 (lower is better)
Translates to: IASAITCSGTQS*LIFRVYFCLSL
Trigger: TAATGACAAGCAGAAGTATACTCTGAAAATCAACCATGACTGTGTACCAGAACAAGTAATTGCTGAAGCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS CCA 72 bp ATGTTTCCCTTTGATACAACCATAATACTTGGGATGTaGCACAAATGCTTTTTAGGGTACCTCTCATTTATT +
Preference number: 6 (lower is better)
Translates to: MFPFDTTIILGM*HKCFLGYLSFI
Trigger: AATAAATGAGAGGTACCCTAAAAAGCATTTGTGCCACATCCCAAGTATTATGGTTGTATCAAAGGGAAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675796.1
CDS CAA 72 bp GCTTCAGCAATTACTTGTTCTGGTACACAGTCATGGTaGATTTTCAGAGTATACTTCTGCTTGTCATTATTT +
Preference number: 6 (lower is better)
Translates to: ASAITCSGTQSW*IFRVYFCLSLF
Trigger: AAATAATGACAAGCAGAAGTATACTCTGAAAATCAACCATGACTGTGTACCAGAACAAGTAATTGCTGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263967.4
ENST00000643187.1
ENST00000675467.1
ENST00000675786.1
CDS TCA 72 bp GCTGTTCAAAAGGTTGACATGTCTAACTTCTCCATATaGATCTTCTTAAGAAGTCCCAAACTTCTTACATTA +
Preference number: 6 (lower is better)
Translates to: AVQKVDMSNFSI*IFLRSPKLLTL
Trigger: TAATGTAAGAAGTTTGGGACTTCTTAAGAAGATTCATATGGAGAAGTTAGACATGTCAACCTTTTGAACAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674534.1
CDS CAA 72 bp ATGTCTGCCAAATATCCATGTCTGAATAACCATAGCTaGCCTACTAGTTATTTAAGTAAAAATCGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: MSAKYPCLNNHS*PTSYLSKNRVP
Trigger: TGGAACACGATTTTTACTTAAATAACTAGTAGGCAAGCTATGGTTATTCAGACATGGATATTTGGCAGACAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675796.1