RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3C3 (Homo sapiens)

Ensembl gene IDs: ENSG00000078142

Ensembl transcript IDs: ENST00000262039.9, ENST00000398870.7, ENST00000585528.5, ENST00000586545.5, ENST00000587261.5, ENST00000587328.2, ENST00000587402.2, ENST00000588156.5, ENST00000588631.5, ENST00000589056.5, ENST00000589550.1, ENST00000590013.2, ENST00000591011.1, ENST00000593098.5, ENST00000597477.5, ENST00000639914.1

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTATCGGATaGAGGGGTCCCACCTCAGCTTCTCTAAGTGGTCACCCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: TVESGSCGLVQPLIG*RGPTSASLSGHPGG
Trigger: CCCACCTGGGTGACCACTTAGAGAAGCTGAGGTGGGACCCCTGCATCCGATAAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp GCAGCCACTTATCGGATGCAGGGGTCCCACCTCAGCTTCTCTAAGTaGTCACCCAGGTGGGATGCTCACTATCTTCTGAGGCTTATTCTG +
Preference number: 1 (lower is better)
Translates to: AATYRMQGSHLSFSK*SPRWDAHYLLRLIL
Trigger: CAGAATAAGCCTCAGAAGATAGTGAGCATCCCACCTGGGTGACCACTTAGAGAAGCTGAGGTGGGACCCCTGCATCCGATAAGTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp CATGTCCATTCCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTaGTCTAGTGCAGCCACTTATCGGATGCAGGGGTCCCACCTCAGC +
Preference number: 1 (lower is better)
Translates to: HVHSHSSSYSGVWFL*SSAATYRMQGSHLS
Trigger: GCTGAGGTGGGACCCCTGCATCCGATAAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGGAATGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR GCA 90 bp TCACCACCAACCAGTCTTTTCCACTCGGAGACACATCATGGGCCATaGCTTAAAGCCACGGTGTCAGTGCAGACATCTATAGAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: SPPTSLFHSETHHGP*LKATVSVQTSIEEA
Trigger: AGCTTCCTCTATAGATGTCTGCACTGACACCGTGGCTTTAAGGCATGGCCCATGATGTGTCTCCGAGTGGAAAAGACTGGTTGGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 90 bp AGAAAGAGAAAACAACAAAGGCTCTTGTCTGAGGCAGGAGTGGTTTaGCATTCAGACAAATGGCCTGCCTGGACAAGCCACAAGGCCCCA +
Preference number: 1 (lower is better)
Translates to: RKRKQQRLLSEAGVV*HSDKWPAWTSHKAP
Trigger: TGGGGCCTTGTGGCTTGTCCAGGCAGGCCATTTGTCTGAATGTCAAACCACTCCTGCCTCAGACAAGAGCCTTTGTTGTTTTCTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR CCA 90 bp CGGATGCAGGGGTCCCACCTCAGCTTCTCTAAGTGGTCACCCAGGTaGGATGCTCACTATCTTCTGAGGCTTATTCTGTTTTTCCTTTTT +
Preference number: 1 (lower is better)
Translates to: RMQGSHLSFSKWSPR*DAHYLLRLILFFLF
Trigger: AAAAAGGAAAAACAGAATAAGCCTCAGAAGATAGTGAGCATCCCACCTGGGTGACCACTTAGAGAAGCTGAGGTGGGACCCCTGCATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp AGCCCAGTGGGTCTCAGCTTCATTATACCCAGTCCCTACTCAAGATaGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGGCCCAAGG +
Preference number: 1 (lower is better)
Translates to: SPVGLSFIIPSPYSR*SCSSSNVSDSDGPR
Trigger: CCTTGGGCCATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGGTATAATGAAGCTGAGACCCACTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp GGTGGCTTCATCTTCCCTTCTCTGCCAGCCACGTGTTACACAAGATaGACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGG +
Preference number: 1 (lower is better)
Translates to: GGFIFPSLPATCYTR*TQSTGKPICIRLGW
Trigger: CCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGTCCATCTTGTGTAACACGTGGCTGGCAGAGAAGGGAAGATGAAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp ACAAGGCCCACCTGCAGATTGATTTGGCTGCTCAGGAGTGGGGATTaGGAATGTGCACATTTAATAAGGTTCCCAGGAGGTTTTGACATG +
Preference number: 1 (lower is better)
Translates to: TRPTCRLIWLLRSGD*ECAHLIRFPGGFDM
Trigger: CATGTCAAAACCTCCTGGGAACCTTATTAAATGTGCACATTCCCAATCCCCACTCCTGAGCAGCCAAATCAATCTGCAGGTGGGCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR GCA 90 bp GTGGGTCTCAGCTTCATTATACCCAGTCCCTACTCAAGATGGAGTTaGTCTAGTTCAAATGTCTCTGACAGTGATGGCCCAAGGAGTTCT +
Preference number: 1 (lower is better)
Translates to: VGLSFIIPSPYSRWS*SSSNVSDSDGPRSS
Trigger: AGAACTCCTTGGGCCATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGGTATAATGAAGCTGAGACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp AAAACTCACAAGGCCCACCTGCAGATTGATTTGGCTGCTCAGGAGTaGGGATTGGGAATGTGCACATTTAATAAGGTTCCCAGGAGGTTT +
Preference number: 1 (lower is better)
Translates to: KTHKAHLQIDLAAQE*GLGMCTFNKVPRRF
Trigger: AAACCTCCTGGGAACCTTATTAAATGTGCACATTCCCAATCCCCACTCCTGAGCAGCCAAATCAATCTGCAGGTGGGCCTTGTGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp AAACTGGCACTCACAGATCCTGCTGAAGTTACTGGAAAGGGATCCTaGTTAAGACTCCAAGAGAGGGTTCTTGGATCTCCTGCAGAAGAA +
Preference number: 1 (lower is better)
Translates to: KLALTDPAEVTGKGS*LRLQERVLGSPAEE
Trigger: TTCTTCTGCAGGAGATCCAAGAACCCTCTCTTGGAGTCTTAACCAGGATCCCTTTCCAGTAACTTCAGCAGGATCTGTGAGTGCCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 90 bp GAACTGAGGGTTCCTCCCCTTTTTAGACCATATAGGGTAACTTCCTaGTGTTGTTATGGCATTTGTAAACTGTCATGGTGCTGGTGGGAG +
Preference number: 1 (lower is better)
Translates to: ELRVPPLFRPYRVTS*CCYGICKLSWCWWE
Trigger: CTCCCACCAGCACCATGACAGTTTACAAATGCCATAACAACATCAGGAAGTTACCCTATATGGTCTAAAAAGGGGAGGAACCCTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp AATAAGAAAAGGAATAAGCCTTGTCTTCTGGGGATTAAAGCTGAATaGACCACATACCCACAAATGCACACATTAGAGGTCAGTACTATC +
Preference number: 1 (lower is better)
Translates to: NKKRNKPCLLGIKAE*TTYPQMHTLEVSTI
Trigger: GATAGTACTGACCTCTAATGTGTGCATTTGTGGGTATGTGGTCCATTCAGCTTTAATCCCCAGAAGACAAGGCTTATTCCTTTTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 90 bp CACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAAATaGAAGCTGGAAGAATTTAATCGTCAAGACTGTGATCACTGGGGT +
Preference number: 1 (lower is better)
Translates to: HIRGQYYHYHYLSEK*KLEEFNRQDCDHWG
Trigger: ACCCCAGTGATCACAGTCTTGACGATTAAATTCTTCCAGCTTTCATTTTTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 90 bp TATGGTAACTTGAAGATTAAGATTTCTCTTCCTTGCTGGTTACTCTaGAGTCTCCAATATACAAAGGTTGCTCCTAACGTGGTTTTCTTA +
Preference number: 1 (lower is better)
Translates to: YGNLKIKISLPCWLL*SLQYTKVAPNVVFL
Trigger: TAAGAAAACCACGTTAGGAGCAACCTTTGTATATTGGAGACTTCAGAGTAACCAGCAAGGAAGAGAAATCTTAATCTTCAAGTTACCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp ACAGGTTTTAGGCAGGTAGTAGAGGAAAGGACAACCTTTTACAACTaGCCATATATAATGACAATTTCAAGTAAGCAGTTCGATATTTCA +
Preference number: 1 (lower is better)
Translates to: TGFRQVVEERTTFYN*PYIMTISSKQFDIS
Trigger: TGAAATATCGAACTGCTTACTTGAAATTGTCATTATATATGGCCAGTTGTAAAAGGTTGTCCTTTCCTCTACTACCTGCCTAAAACCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR TCA 90 bp GTGTCTGCCCTTCTAGAATTTCATGTTTGTGTCAAAATTATTTATTaGGTTCCTTATAAACATGGTCATATCTATGCAGAGTGCTGTGGA +
Preference number: 1 (lower is better)
Translates to: VSALLEFHVCVKIIY*VPYKHGHIYAECCG
Trigger: TCCACAGCACTCTGCATAGATATGACCATGTTTATAAGGAACTCAATAAATAATTTTGACACAAACATGAAATTCTAGAAGGGCAGACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 90 bp CTAGTGATAAGTGCTATAAACAATACAGTAATAAGTAGAGAGCATTaGAGGAAGAGGGCAGATATGTTATTACAGATCAAGGAGTTAGAA +
Preference number: 1 (lower is better)
Translates to: LVISAINNTVISREH*RKRADMLLQIKELE
Trigger: TTCTAACTCCTTGATCTGTAATAACATATCTGCCCTCTTCCTCCAATGCTCTCTACTTATTACTGTATTGTTTATAGCACTTATCACTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR TCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACTGGCCCCTGTTCCCTaGCACTGGCCTGTGGAATCT +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLAPVP*HWPVES
Trigger: AGATTCCACAGGCCAGTGTCAGGGAACAGGGGCCAG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCTGGCCCCTGTTCCCTaGCACTGGCCTGTGGAATCT +
Preference number: 2 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLAPVP*HWPVES
Trigger: AGATTCCACAGGCCAGTGTCAGGGAACAGGGGCCAG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTTGGCTGCTCAGGAGTaGGGATTGGGAATGTGCACA +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLAAQE*GLGMCT
Trigger: TGTGCACATTCCCAATCCCCACTCCTGAGCAGCCAA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCCTGACACTGGCCTGTaGAATCTCTGGACTACAGGA +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPPDTGL*NLWTTG
Trigger: TCCTGTAGTCCAGAGATTCCACAGGCCAGTGTCAGG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGGCATCGGAATCCCCTaGGAAAACTCACAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRGIGIP*ENSQGP
Trigger: TGGGCCTTGTGAGTTTTCCCAGGGGATTCCGATGCC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTACCACAGAAGGAAACTaGCACTCACAGATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPTTEGN*HSQILL
Trigger: CAGCAGGATCTGTGAGTGCCAGTTTCCTTCTGTGGT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp CCGGGATACCAGGGTGGTAGGGCCTCTCTTTCCCCACGTATTCTCAGTGCTGCTAGTGGTTTTTCAACTTaGTCACTCCAACAGAATAGC +
Preference number: 2 (lower is better)
Translates to: PGYQGGRASLSPRILSAASGFST*SLQQNS
Trigger: GCTATTCTGTTGGAGTGACCAAGTTGAAAAACCACT...AGCAGCACTGAGAATACGTGGGGAAAGAGAGGCCCTACCACCCTGGTATCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
3UTR-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCTCACAAGGCCCACCTaGAGATTGATTTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLTRPT*RLIWLL
Trigger: GAGCAGCCAAATCAATCTGCAGGTGGGCCTTGTGAG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTAGGAGTTCTGAGGTTTaGGGAAATGCAGTTGTACCG +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPRSSEV*GNAVVP
Trigger: CGGTACAACTGCATTTCCCCAAACCTCAGAACTCCT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 90 bp ATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTCCACATGCACCTaGCAAACGTCATACATGATGCAACCAATCAGAAACCACCTCCTC +
Preference number: 2 (lower is better)
Translates to: ICIRLGWGDQPSTCT*QTSYMMQPIRNHLL
Trigger: GAGGAGGTGGTTTCTGATTGGTTGCATCATGTATGACGTTTGCAAGGTGCATGTGGAAGGCTGGTCGCCCCACCCTAATCTTATGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTACCCTCCTGAGAGATaGTCCTTCCTCACCCAACAC +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDYPPER*SFLTQH
Trigger: GTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTATCTTCTGTTCTTATaGCTTCCCAGCCCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDYLLFL*LPSPGP
Trigger: GGGGCCAGGGCTGGGAAGGCATAAGAACAGAAGATA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCCTTGCTGGTTACTCTaGAGTCTCCAATATACAAAG +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPPCWLL*SLQYTK
Trigger: CTTTGTATATTGGAGACTTCAGAGTAACCAGCAAGG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACCGGTAACCCCACTCTaGAGAGGCAAGCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKAPVTPL*RGKPRA
Trigger: AGCCCTGGGCTTGCCTCTTCAGAGTGGGGTTACCGG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCAAGTATGCCAAATCCTaGAATAGGAGATGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: ATVYPPERCSFLTQHASTKYAKS*NRRCKC
Trigger: ACACTTGCATCTCCTATTTCAGGATTTGGCATACTT...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTACTGTTTACCCTCCTaGGAGATGCTCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDYCLPS*EMLLPH
Trigger: GTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTCCTATCTCATCCTGTaGCTAAGAATGCCTAACTTC +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSYLIL*LRMPNF
Trigger: GAAGTTAGGCATTCTTAGTCACAGGATGAGATAGGA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACCCAAAGTTACACTATaGAGTGGGTCCACTAGACTC +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRPKVTL*SGSTRL
Trigger: GAGTCTAGTGGACCCACTGCATAGTGTAACTTTGGG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGGTTCTTGGATCTCCTaGAGAAGAATTCAGGGGAGT +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRGSWIS*RRIQGS
Trigger: ACTCCCCTGAATTCTTCTGCAGGAGATCCAAGAACC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGGGATTAAAGCTGAATaGACCACATACCCACAAATG +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPGIKAE*TTYPQM
Trigger: CATTTGTGGGTATGTGGTCCATTCAGCTTTAATCCC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTGGAGTCTGGTTCCTGTaGTCTAGTGCAGCCACTTAT +
Preference number: 2 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFGVWFL*SSAATY
Trigger: ATAAGTGGCTGCACTAGACCACAGGAACCAGACTCC...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTCTTACAGTGGAGTCTaGTTCCTGTGGTCTAGTGCA +
Preference number: 2 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLSYSGV*FLWSSA
Trigger: TGCACTAGACCACAGGAACCAGACTCCACTGTAAGA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTGATACCTGGTTGGGTTaGATGACCAGCGTAACAGAG +
Preference number: 2 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFDTWLG*MTSVTE
Trigger: CTCTGTTACGCTGGTCATCCAACCCAACCAGGTATC...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACCGTCTTGGTTTTGGTaGGTTTTGGCTGGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRPSWFW*VLAGFF
Trigger: AAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAGGTTACTGCTGTCCTaGTATGAAGATATAAGAGGA +
Preference number: 2 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLRLLLS*YEDIRG
Trigger: TCCTCTTATATCTTCATATCAGGACAGCAGTAACCT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGGGGAGTCCATAAAGTaGAAGCAGGTTAATAAAGAA +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPGESIK*KQVNKE
Trigger: TTCTTTATTAACCTGCTTTCACTTTATGGACTCCCC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAAGCAATTCTTGAACTaGAGAAGAATGAGCCATCAC +
Preference number: 2 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLKQFLN*RRMSHH
Trigger: GTGATGGCTCATTCTTCTGCAGTTCAAGAATTGCTT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCAAGATGATACACTTTTaGCTTCCAGTTAGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: ATVYPPERCSFLTQHASTKMIHF*LPVSRV
Trigger: AACTCTGCTAACTGGAAGGCAAAAGTGTATCATCTT...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCCCAAAGTTACACTATaGAGTGGGTCCACTAGACTC +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDPKVTL*SGSTRL
Trigger: GAGTCTAGTGGACCCACTGCATAGTGTAACTTTGGG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGATGATTAGGGAGGTCTaGGTTTCTTGTGGTGACAGA +
Preference number: 2 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLMIREV*VSCGDR
Trigger: TCTGTCACCACAAGAAACCCAGACCTCCCTAATCAT...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCTACCATTATCTCAGTaGAAAATGAAAGCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLPLSQ*KMKAGR
Trigger: TCTTCCAGCTTTCATTTTTCACTGAGATAATGGTAG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAGGCCCACCTGCAGATTaGTTTGGCTGCTCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKAGPPAD*FGCSGV
Trigger: CACTCCTGAGCAGCCAAATCAATCTGCAGGTGGGCC...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACTAATGTTCCTAACATGTaGAGAAACCAAAGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: PTYSQCCSLSKWFFNLVTNVPNM*RNQSCH
Trigger: GTGACAGCTTTGGTTTCTTCACATGTTAGGAACATT...AGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
3UTR-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATACCCTCCTGAGAGATaGTCCTTCCTCACCCAACAC +
Preference number: 2 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEYPPER*SFLTQH
Trigger: GTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp AGTAGAGAGCATTGGAGGAAGAGGGCAGATATGTTATTACAGATCAAGGAGTTATTCAGACAAATGGCCTaGCTGGACAAGCCACAAGGC +
Preference number: 2 (lower is better)
Translates to: SREHWRKRADMLLQIKELFRQMA*LDKPQG
Trigger: GCCTTGTGGCTTGTCCAGGCAGGCCATTTGTCTGAA...TAACTCCTTGATCTGTAATAACATATCTGCCCTCTTCCTCCAATGCTCTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACTCAGGAGTGGGGATTaGGAATGTGCACATTTAATA +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLRSGD*ECAHLI
Trigger: TATTAAATGTGCACATTCCCAATCCCCACTCCTGAG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGCCAGAGTTTTAGAATaGCAATACTGGGATGCTATG +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRARVLE*QYWDAM
Trigger: CATAGCATCCCAGTATTGCCATTCTAAAACTCTGGC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TCCTTGTCGATGAGCTTTGGTGAGATTTCTAACACCTTGGTGATAAAGGGTGGGTGCTCCCTCTCCAAGTaGTTTTTCAACTTGGTCACT +
Preference number: 2 (lower is better)
Translates to: SLSMSFGEISNTLVIKGGCSLSK*FFNLVT
Trigger: AGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCA...CCCACCCTTTATCACCAAGGTGTTAGAAATCTCACCAAAGCTCATCGACAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
3UTR-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTGGGATTAAAGCTGAATaGACCACATACCCACAAATG +
Preference number: 2 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFGIKAE*TTYPQM
Trigger: CATTTGTGGGTATGTGGTCCATTCAGCTTTAATCCC...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCTCAGGAGTGGGGATTaGGAATGTGCACATTTAATA +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLRSGD*ECAHLI
Trigger: TATTAAATGTGCACATTCCCAATCCCCACTCCTGAG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATGGTTCATGCAGAAATaGGTTACTCTACCCATTTTG +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRWFMQK*VTLPIL
Trigger: CAAAATGGGTAGAGTAACCCATTTCTGCATGAACCA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATTAATAAAGAAAGGATaGCTACTCCATAGGCAGACC +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLIKKG*LLHRQT
Trigger: GGTCTGCCTATGGAGTAGCCATCCTTTCTTTATTAA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTAGCAGAGTTAAGTTaGTGCTATTGGGATCATATG +
Preference number: 2 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLAELS*CYWDHM
Trigger: CATATGATCCCAATAGCATCAACTTAACTCTGCTAA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATAGCCACTTTTCTTTTTaGTATAGGCTTGTCACTCAC +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDSHFSF*YRLVTH
Trigger: GTGAGTGACAAGCCTATATCAAAAAGAAAAGTGGCT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTAACCCAAGGAAAGTATaGATATGTGGCATGATGACA +
Preference number: 2 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFNPRKV*ICGMMT
Trigger: TGTCATCATGCCACATATTCATACTTTCCTTGGGTT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATAACCCAAGGAAAGTATaGATATGTGGCATGATGACA +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDNPRKV*ICGMMT
Trigger: TGTCATCATGCCACATATTCATACTTTCCTTGGGTT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACCTGACACTGGCCTGTaGAATCTCTGGACTACAGGA +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKAPDTGL*NLWTTG
Trigger: TCCTGTAGTCCAGAGATTCCACAGGCCAGTGTCAGG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTGCATCCTGAAGGGGAGAAGATGATGATAAGAACTCAACAAGCTCTAGGAGAGATAAGTAGAGAGCATTaGAGGAAGAGGGCAGATATG +
Preference number: 2 (lower is better)
Translates to: LHPEGEKMMIRTQQALGEISREH*RKRADM
Trigger: CATATCTGCCCTCTTCCTCCAATGCTCTCTACTTAT...CTCTCCTAGAGCTTGTTGAGTTCTTATCATCATCTTCTCCCCTTCAGGATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTGCTTGAAATATCACTaGACTTGTCACCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFCLKYH*TCHQRS
Trigger: ACTTCTTTGGTGACAAGTTCAGTGATATTTCAAGCA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCTATCATATGGAGAATaGTTTTTGCTAACTCCAGCA +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLSYGE*FLLTPA
Trigger: TGCTGGAGTTAGCAAAAATCATTCTCCATATGATAG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCTACCATTATCTCAGTaGAAAATGAAAGCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLPLSQ*KMKAGR
Trigger: TCTTCCAGCTTTCATTTTTCACTGAGATAATGGTAG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp ATTACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTGAGGCAGGAGTGGTTTaGCATTCAGACAAATGGCCT +
Preference number: 2 (lower is better)
Translates to: ITDQGVRKGFSKEMPLELEAGVV*HSDKWP
Trigger: AGGCCATTTGTCTGAATGTCAAACCACTCCTGCCTC...AAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACTAAATTCAGGTTACTaGTGTCCTGATATGAAGATA +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLNSGY*CPDMKI
Trigger: TATCTTCATATCAGGACAGCAGTAACCTGAATTTAG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCTAAATTCAGGTTACTaGTGTCCTGATATGAAGATA +
Preference number: 2 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLNSGY*CPDMKI
Trigger: TATCTTCATATCAGGACAGCAGTAACCTGAATTTAG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCATTCTCTGAAACTGTaGCACAATTTTACCTTCATC +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDHSLKL*HNFTFI
Trigger: GATGAAGGTAAAATTGTGGCACAGTTTCAGAGAATG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGAAATTCTATGGTTCATaGAGAAATGGGTTACTCTAC +
Preference number: 2 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLKFYGS*RNGLLY
Trigger: GTAGAGTAACCCATTTCTGCATGAACCATAGAATTT...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAAAATTCTATGGTTCATaGAGAAATGGGTTACTCTAC +
Preference number: 2 (lower is better)
Translates to: IDKLAACMGECQQKLRTRKFYGS*RNGLLY
Trigger: GTAGAGTAACCCATTTCTGCATGAACCATAGAATTT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGGAGTTTCACCATGTTaGCCGGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLGVSPC*PGWSQT
Trigger: AGTTTGAGACCAGCCCGGGCAACATGGTGAAACTCC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATTACCCAGGCTGCAGTaGAATGGTGCAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKALPRLQ*NGAISA
Trigger: AGCTGAGATTGCACCATTGCACTGCAGCCTGGGTAA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGAAAGTATGAATATGTaGCATGATGACACAACACCT +
Preference number: 2 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDESMNM*HDDTTP
Trigger: AGGTGTTGTGTCATCATGCCACATATTCATACTTTC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGCTCAGCTTCTCTAAGTaGTCACCCAGGTGGGATGCT +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLLSFSK*SPRWDA
Trigger: AGCATCCCACCTGGGTGACCACTTAGAGAAGCTGAG...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTTGGCTGCTCAGGAGTaGGGATTGGGAATGTGCACA +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLLAAQE*GLGMCT
Trigger: TGTGCACATTCCCAATCCCCACTCCTGAGCAGCCAA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTAGAATGGCAATACTaGGATGCTATGTTAACTTCT +
Preference number: 2 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLEWQY*DAMLTS
Trigger: AGAAGTTAACATAGCATCCCAGTATTGCCATTCTAA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGAATGCCTAACTTCCTaGGAATGCAGCCCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLECLTS*ECSPVG
Trigger: ACCCACTGGGCTGCATTCCCAGGAAGTTAGGCATTC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCTGGATCAGGTGGTATaGATTCTTATAAGTGAAATA +
Preference number: 2 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLDQVV*ILISEI
Trigger: TATTTCACTTATAAGAATGCATACCACCTGATCCAG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTTACCCAGGCTGCAGTaGAATGGTGCAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLLPRLQ*NGAISA
Trigger: AGCTGAGATTGCACCATTGCACTGCAGCCTGGGTAA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATCTTACAGTGGAGTCTaGTTCCTGTGGTCTAGTGCA +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKASYSGV*FLWSSA
Trigger: TGCACTAGACCACAGGAACCAGACTCCACTGTAAGA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTTCCCGTCTTGGTTTTaGTGGGTTTTGGCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLFPSWF*WVLAGF
Trigger: GAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAAGTATGCCAAATCCTaGAATAGGAGATGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEKYAKS*NRRCKC
Trigger: ACACTTGCATCTCCTATTTCAGGATTTGGCATACTT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGCTGGCATTACAGGCATaGGCCAGCCAAATTCTAGTT +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLLALQA*ASQILV
Trigger: AACTAGAATTTGGCTGGCTCATGCCTGTAATGCCAG...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp AGTAGAGAGCATTGGAGGAAGAGGGCAGATATGTTATTACAGATCAAGGAGTTAGATCTATTTTGGAGTTaGGGAGTAGACAAGATTTGC +
Preference number: 2 (lower is better)
Translates to: SREHWRKRADMLLQIKELDLFWS*GVDKIC
Trigger: GCAAATCTTGTCTACTCCTCAACTCCAAAATAGATC...TAACTCCTTGATCTGTAATAACATATCTGCCCTCTTCCTCCAATGCTCTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAAGCAATTCTTGAACTaGAGAAGAATGAGCCATCAC +
Preference number: 2 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEKQFLN*RRMSHH
Trigger: GTGATGGCTCATTCTTCTGCAGTTCAAGAATTGCTT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATTCAAATCCCAACTCTaGTCTCACCAGCAGCTTATC +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKAFKSQL*SHQQLI
Trigger: GATAAGCTGCTGGTGAGAGCAGAGTTGGGATTTGAA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGAGGAGTTCTGAGGTTTaGGGAAATGCAGTTGTACCG +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLRSSEV*GNAVVP
Trigger: CGGTACAACTGCATTTCCCCAAACCTCAGAACTCCT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 90 bp AAAGGGAAAATGAAGTTAGCATATAACAAGAGATACCTGGTTGGGTaGGATGACCAGCGTAACAGAGCCTCAAATTTATCTTCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: KGKMKLAYNKRYLVG*DDQRNRASNLSSVL
Trigger: AAGAACAGAAGATAAATTTGAGGCTCTGTTACGCTGGTCATCCAACCCAACCAGGTATCTCTTGTTATATGCTAACTTCATTTTCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATTAGCAGAGTTAAGTTaGTGCTATTGGGATCATATG +
Preference number: 2 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSELAELS*CYWDHM
Trigger: CATATGATCCCAATAGCATCAACTTAACTCTGCTAA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTGTAAACTGTCATGGTaGTGGTGGGAGTGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLCKLSW*WWECLL
Trigger: TAAGAGACACTCCCACCAGCACCATGACAGTTTACA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGATAACAAGAGATACCTaGTTGGGTTGGATGACCAGC +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLITRDT*LGWMTS
Trigger: GCTGGTCATCCAACCCAACCAGGTATCTCTTGTTAT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGATGATTAGGGAGGTCTaGGTTTCTTGTGGTGACAGA +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLMIREV*VSCGDR
Trigger: TCTGTCACCACAAGAAACCCAGACCTCCCTAATCAT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGCCTTGCTGGTTACTCTaGAGTCTCCAATATACAAAG +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLPCWLL*SLQYTK
Trigger: CTTTGTATATTGGAGACTTCAGAGTAACCAGCAAGG...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp GTTCAGGTTTCATTCAAATTGTTTAGGCAACATATATTGTTTGCTTCAAGTGGGCAGTGGGTAACTTCATaGTCTATTTTGGAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: VQVSFKLFRQHILFASSGQWVTS*SILELR
Trigger: CCTCAACTCCAAAATAGATCATGAAGTTACCCACTG...CCCACTTGAAGCAAACAATATATGTTGCCTAAACAATTTGAATGAAACCTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACTGTATTTTGGAATATaGGTTATCTACCCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKALYFGI*VIYPQG
Trigger: ACCCTGAGGGTAGATAACCCATATTCCAAAATACAG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATGGTTCATGCAGAAATaGGTTACTCTACCCATTTTG +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKAWFMQK*VTLPIL
Trigger: CAAAATGGGTAGAGTAACCCATTTCTGCATGAACCA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp GAGAAGATGATGATAAGAACTCAACAAGCTCTAGGAGAGCAAGGATTTCTGTCTACTTGTATCCATTATTaGCTTTCCATAAAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: EKMMIRTQQALGEQGFLSTCIHY*LSIKRG
Trigger: GCCTCTTTTTATGGAAAGCCAATAATGGATACAAGT...AGACAGAAATCCTTGCTCTCCTAGAGCTTGTTGAGTTCTTATCATCATCTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGAGGTTACTGCTGTCCTaGTATGAAGATATAAGAGGA +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLRLLLS*YEDIRG
Trigger: TCCTCTTATATCTTCATATCAGGACAGCAGTAACCT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGAGCCACTTTTCTTTTTaGTATAGGCTTGTCACTCAC +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLSHFSF*YRLVTH
Trigger: GTGAGTGACAAGCCTATATCAAAAAGAAAAGTGGCT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATTACTCTACCCATTTTaGGCTTATTTCCATTTCTCC +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKALLYPF*AYFHFS
Trigger: GGAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGAAACTAGTGTTGAAATaGAATGTACCAGCCCATAGC +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLKLVLK*NVPAHS
Trigger: GCTATGGGCTGGTACATTGCATTTCAACACTAGTTT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAGAAAGTATGAATATGTaGCATGATGACACAACACCT +
Preference number: 2 (lower is better)
Translates to: GKGHKINDIRISPDSHKAESMNM*HDDTTP
Trigger: AGGTGTTGTGTCATCATGCCACATATTCATACTTTC...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTGCTTGAAATATCACTaGACTTGTCACCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLCLKYH*TCHQRS
Trigger: ACTTCTTTGGTGACAAGTTCAGTGATATTTCAAGCA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGAAGATGATACACTTTTaGCTTCCAGTTAGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLKMIHF*LPVSRV
Trigger: AACTCTGCTAACTGGAAGGCAAAAGTGTATCATCTT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp TATCGGATGCAGGGGTCCCACCTCAGCTTCTCTAAGTaGTCACCCAGGTGGGATGCTCACTATCTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: YRMQGSHLSFSK*SPRWDAHYLLR
Trigger: CCTCAGAAGATAGTGAGCATCCCACCTGGGTGACCACTTAGAGAAGCTGAGGTGGGACCCCTGCATCCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp TCCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTaGTCTAGTGCAGCCACTTATCGGATGCAGGGGTCC +
Preference number: 3 (lower is better)
Translates to: SHSSSYSGVWFL*SSAATYRMQGS
Trigger: GGACCCCTGCATCCGATAAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTGGAGTTTCACCATGTaGCCCGGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPWSFTM*PGLVSN
Trigger: GTTTGAGACCAGCCCGGGCAACATGGTGAAACTCCA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp AATTACATGCTTGCCCTCTCGCCGGTAACCCCACTCTaGAGAGGCAAGCCCAGGGCTAAGAATTTGAGACAA +
Preference number: 3 (lower is better)
Translates to: NYMLALSPVTPL*RGKPRAKNLRQ
Trigger: TTGTCTCAAATTCTTAGCCCTGGGCTTGCCTCTTCAGAGTGGGGTTACCGGCGAGAGGGCAAGCATGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp CCGAGCTGTATGTGGGTAAGACCAGGGCATATGGTATaGTTAGGGAGGTCTGGGTTTCTTGTGGTGACAGAC +
Preference number: 3 (lower is better)
Translates to: PSCMWVRPGHMV*LGRSGFLVVTD
Trigger: GTCTGTCACCACAAGAAACCCAGACCTCCCTAATCATACCATATGCCCTGGTCTTACCCACATACAGCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp GGGTCCCACCTCAGCTTCTCTAAGTGGTCACCCAGGTaGGATGCTCACTATCTTCTGAGGCTTATTCTGTTT +
Preference number: 3 (lower is better)
Translates to: GSHLSFSKWSPR*DAHYLLRLILF
Trigger: AAACAGAATAAGCCTCAGAAGATAGTGAGCATCCCACCTGGGTGACCACTTAGAGAAGCTGAGGTGGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp CAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTaGGGCGACCAGCCTTCCACATGCACCTTGCAAACG +
Preference number: 3 (lower is better)
Translates to: QSTGKPICIRLG*GDQPSTCTLQT
Trigger: CGTTTGCAAGGTGCATGTGGAAGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp GCCAGCCACGTGTTACACAAGATGGACCCAATCAACTaGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGA +
Preference number: 3 (lower is better)
Translates to: ASHVLHKMDPIN*KAHLHKIRVGR
Trigger: TCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGTCCATCTTGTGTAACACGTGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATAGGCCCACCTGCAGATaGATTTGGCTGCTCAGGAGT +
Preference number: 3 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDRPTCR*IWLLRS
Trigger: ACTCCTGAGCAGCCAAATCAATCTGCAGGTGGGCCT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp AAACAACAAAGGCTCTTGTCTGAGGCAGGAGTGGTTTaGCATTCAGACAAATGGCCTGCCTGGACAAGCCAC +
Preference number: 3 (lower is better)
Translates to: KQQRLLSEAGVV*HSDKWPAWTSH
Trigger: GTGGCTTGTCCAGGCAGGCCATTTGTCTGAATGTCAAACCACTCCTGCCTCAGACAAGAGCCTTTGTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR GCA 72 bp ACCAGTCTTTTCCACTCGGAGACACATCATGGGCCATaGCTTAAAGCCACGGTGTCAGTGCAGACATCTATA +
Preference number: 3 (lower is better)
Translates to: TSLFHSETHHGP*LKATVSVQTSI
Trigger: TATAGATGTCTGCACTGACACCGTGGCTTTAAGGCATGGCCCATGATGTGTCTCCGAGTGGAAAAGACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR GCA 72 bp TGCATAAGATTAGGGTGGGGCGACCAGCCTTCCACATaGACCTTGCAAACGTCATACATGATGCAACCAATC +
Preference number: 3 (lower is better)
Translates to: CIRLGWGDQPST*TLQTSYMMQPI
Trigger: GATTGGTTGCATCATGTATGACGTTTGCAAGGTGCATGTGGAAGGCTGGTCGCCCCACCCTAATCTTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp CATGTCCATTCCCACTCTAGTTCTTACAGTGGAGTCTaGTTCCTGTGGTCTAGTGCAGCCACTTATCGGATG +
Preference number: 3 (lower is better)
Translates to: HVHSHSSSYSGV*FLWSSAATYRM
Trigger: CATCCGATAAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGGAATGGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAATTCCCGTCTTGGTTTaGGTGGGTTTTGGCTGGCTT +
Preference number: 3 (lower is better)
Translates to: IDKLAACMGECQQKLRTRIPVLV*VGFGWL
Trigger: AAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp GACCGGAGGTCACTTTCATTCCCGTCTTGGTTTTGGTaGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTT +
Preference number: 3 (lower is better)
Translates to: DRRSLSFPSWFW*VLAGFFTTDCF
Trigger: AAAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAAAGTGACCTCCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp CTCACAGATCCTGCTGAAGTTACTGGAAAGGGATCCTaGTTAAGACTCCAAGAGAGGGTTCTTGGATCTCCT +
Preference number: 3 (lower is better)
Translates to: LTDPAEVTGKGS*LRLQERVLGSP
Trigger: AGGAGATCCAAGAACCCTCTCTTGGAGTCTTAACCAGGATCCCTTTCCAGTAACTTCAGCAGGATCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCCCCAGGGCTAAGAATTaGAGACAAATAACACGTTAT +
Preference number: 3 (lower is better)
Translates to: ATVYPPERCSFLTQHASTPRAKN*RQITRY
Trigger: ATAACGTGTTATTTGTCTCAAATTCTTAGCCCTGGG...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATGGTTTTGGTGGGTTTaGGCTGGCTTCTTTACCACA +
Preference number: 3 (lower is better)
Translates to: IDKLAACMGECQQKLRTRWFWWV*AGFFTT
Trigger: TGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTCCAATATACAAAGGTaGCTCCTAACGTGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSNIQR*LLTWFS
Trigger: AGAAAACCACGTTAGGAGCAACCTTTGTATATTGGA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp ATCTTCCCTTCTCTGCCAGCCACGTGTTACACAAGATaGACCCAATCAACTGGAAAGCCCATTTGCATAAGA +
Preference number: 3 (lower is better)
Translates to: IFPSLPATCYTR*TQSTGKPICIR
Trigger: TCTTATGCAAATGGGCTTTCCAGTTGATTGGGTCCATCTTGTGTAACACGTGGCTGGCAGAGAAGGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp CTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTaGTCACTCCAACAGAATAGCTGGACTTCTTACATG +
Preference number: 3 (lower is better)
Translates to: LSAAPSPSGFST*SLQQNSWTSYM
Trigger: CATGTAAGAAGTCCAGCTATTCTGTTGGAGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
3UTR GCA 72 bp GCAGACATAGACAAGCTGGCAGCTTGCATGGGTGAATaGCAGCAGAAACTAAGGACTAGACATTTTCAAGAT +
Preference number: 3 (lower is better)
Translates to: ADIDKLAACMGE*QQKLRTRHFQD
Trigger: ATCTTGAAAATGTCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTATGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTCCAATATACAAAGGTaGCTCCTAACGTGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLSNIQR*LLTWFS
Trigger: AGAAAACCACGTTAGGAGCAACCTTTGTATATTGGA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp AAGCTGGAAGAATTTAATCGTCAAGACTGTGATCACTaGGGTCTAACTCGACTTCAAATCCCAACTCTGCTC +
Preference number: 3 (lower is better)
Translates to: KLEEFNRQDCDH*GLTRLQIPTLL
Trigger: GAGCAGAGTTGGGATTTGAAGTCGAGTTAGACCCCAGTGATCACAGTCTTGACGATTAAATTCTTCCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCCCAGGGCTAAGAATTaGAGACAAATAACACGTTAT +
Preference number: 3 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDPRAKN*RQITRY
Trigger: ATAACGTGTTATTTGTCTCAAATTCTTAGCCCTGGG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGTTAGCAGAGTTAAGTaGATGCTATTGGGATCATAT +
Preference number: 3 (lower is better)
Translates to: IDKLAACMGECQQKLRTRVSRVK*MLLGSY
Trigger: ATATGATCCCAATAGCATCAACTTAACTCTGCTAAC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp GAGAAGATGATGATAAGAACTCAACAAGCTCTAGGAGAGCAAGGATTTCTGTCTAAACAACAAAGGCTCTaGTCTGAGGCAGGAGTGGTT +
Preference number: 3 (lower is better)
Translates to: EKMMIRTQQALGEQGFLSKQQRL*SEAGVV
Trigger: AACCACTCCTGCCTCAGACAAGAGCCTTTGTTGTTT...AGACAGAAATCCTTGCTCTCCTAGAGCTTGTTGAGTTCTTATCATCATCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGAAATATCACTGAACTaGTCACCAAAGAAGTCACAT +
Preference number: 3 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDEISLN*SPKKSH
Trigger: ATGTGACTTCTTTGGTGACAAGTTCAGTGATATTTC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAACAAGAGATACCTGGTaGGGTTGGATGACCAGCGTA +
Preference number: 3 (lower is better)
Translates to: GKGHKINDIRISPDSHKATRDTW*GWMTSV
Trigger: TACGCTGGTCATCCAACCCAACCAGGTATCTCTTGT...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGTTACTCTACCCATTTaGAGCTTATTTCCATTTCTC +
Preference number: 3 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDVTLPI*SLFPFL
Trigger: GAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAAC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp TCTTTACCACAGACTGTTTTATCAGCAAGGTCTTTGTaGCCTTATCTTGAGCCAATCTCCTATCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: SLPQTVLSARSL*PYLEPISYLIL
Trigger: CAGGATGAGATAGGAGATTGGCTCAAGATAAGGTCACAAAGACCTTGCTGATAAAACAGTCTGTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp GTTCCTCCCCTTTTTAGACCATATAGGGTAACTTCCTaGTGTTGTTATGGCATTTGTAAACTGTCATGGTGC +
Preference number: 3 (lower is better)
Translates to: VPPLFRPYRVTS*CCYGICKLSWC
Trigger: GCACCATGACAGTTTACAAATGCCATAACAACATCAGGAAGTTACCCTATATGGTCTAAAAAGGGGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp CAAATCCCAACTCTGCTCTCACCAGCAGCTTATCCTTaGGCAGATGATTCAATTGCTTTAAACTTCAGTTAT +
Preference number: 3 (lower is better)
Translates to: QIPTLLSPAAYP*ADDSIALNFSY
Trigger: ATAACTGAAGTTTAAAGCAATTGAATCATCTGCCCAAGGATAAGCTGCTGGTGAGAGCAGAGTTGGGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGAGATACCTGGTTGGGTaGGATGACCAGCGTAACAGA +
Preference number: 3 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLRYLVG*DDQRNR
Trigger: TCTGTTACGCTGGTCATCCAACCCAACCAGGTATCT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTCCAAGAGAGGGTTCTaGGATCTCCTGCAGAAGAAT +
Preference number: 3 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLSKRGF*DLLQKN
Trigger: ATTCTTCTGCAGGAGATCCAAGAACCCTCTCTTGGA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp GACTGTTTTATCAGCAAGGTCTTTGTGACCTTATCTTaGGCCAATCTCCTATCTCATCCTGTGACTAAGAAT +
Preference number: 3 (lower is better)
Translates to: DCFISKVFVTLS*ANLLSHPVTKN
Trigger: ATTCTTAGTCACAGGATGAGATAGGAGATTGGCTCAAGATAAGGTCACAAAGACCTTGCTGATAAAACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CCA 72 bp TGTTGTTATGGCATTTGTAAACTGTCATGGTGCTGGTaGGAGTGTCTCTTAGCATGTCAATGCATTATAACT +
Preference number: 3 (lower is better)
Translates to: CCYGICKLSWCW*ECLLACQCIIT
Trigger: AGTTATAATGCATTGACATGCTAAGAGACACTCCCACCAGCACCATGACAGTTTACAAATGCCATAACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR-3UTR CAA 90 bp ATTACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTGGCAACATATATTGTTaGCTTCAAGTGGGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: ITDQGVRKGFSKEMPLELGNIYC*LQVGSK
Trigger: CTTTGACCCCACTTGAAGCAAACAATATATGTTGCC...AAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR TCA 72 bp TTTCTTAGCCCATTAAAGAAAAAGTATGCCAAATCCTaGAATAGGAGATGCAAGTGTAGGAGTTCACACGGA +
Preference number: 3 (lower is better)
Translates to: FLSPLKKKYAKS*NRRCKCRSSHG
Trigger: TCCGTGTGAACTCCTACACTTGCATCTCCTATTTCAGGATTTGGCATACTTTTTCTTTAATGGGCTAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp AACTCTGCTCTCACCAGCAGCTTATCCTTGGGCAGATaGTTCAATTGCTTTAAACTTCAGTTATTTCAACTA +
Preference number: 3 (lower is better)
Translates to: NSALTSSLSLGR*FNCFKLQLFQL
Trigger: TAGTTGAAATAACTGAAGTTTAAAGCAATTGAATCATCTGCCCAAGGATAAGCTGCTGGTGAGAGCAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp TATGGTTCATGCAGAAATGGGTTACTCTACCCATTTTaGGCTTATTTCCATTTCTCCCATTTACATGCCAGA +
Preference number: 3 (lower is better)
Translates to: YGSCRNGLLYPF*AYFHFSHLHAR
Trigger: TCTGGCATGTAAATGGGAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAACCCATTTCTGCATGAACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR TCA 72 bp AAAGAGGCATTTTCCAGTACAGAAGTGTGGGCAAAATaGCCATCTGTAGGATTACTACTAAAGCAATTCTTA +
Preference number: 3 (lower is better)
Translates to: KEAFSSTEVWAK*PSVGLLLKQFL
Trigger: TAAGAATTGCTTTAGTAGTAATCCTACAGATGGTCATTTTGCCCACACTTCTGTACTGGAAAATGCCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGAAATATCACTGAACTaGTCACCAAAGAAGTCACAT +
Preference number: 3 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLEISLN*SPKKSH
Trigger: ATGTGACTTCTTTGGTGACAAGTTCAGTGATATTTC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCCGGTAACCCCACTCTaGAGAGGCAAGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLPVTPL*RGKPRA
Trigger: AGCCCTGGGCTTGCCTCTTCAGAGTGGGGTTACCGG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCGGCCCACCTGCAGATTaGTTTGGCTGCTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTGPPAD*FGCSGV
Trigger: CACTCCTGAGCAGCCAAATCAATCTGCAGGTGGGCC...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCTGGCCCCTGTTCCCTaGCACTGGCCTGTGGAATCT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLAPVP*HWPVES
Trigger: AGATTCCACAGGCCAGTGTCAGGGAACAGGGGCCAG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCACACATCCCATATGGTaGGGGCCACTTGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTTHPIW*GPLGHS
Trigger: GGAATGCCCAAGTGGCCCTCACCATATGGGATGTGT...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCCGGTAACCCCACTCTaGAGAGGCAAGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLPVTPL*RGKPRA
Trigger: AGCCCTGGGCTTGCCTCTTCAGAGTGGGGTTACCGG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCCCCATCGCACCGTCTaGAAAGGTACCACCTACAGC +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLPHRTV*KGTTYS
Trigger: GCTGTAGGTGGTACCTTTGCAGACGGTGCGATGGGG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCCCCATCGCACCGTCTaGAAAGGTACCACCTACAGC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPPHRTV*KGTTYS
Trigger: GCTGTAGGTGGTACCTTTGCAGACGGTGCGATGGGG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCCCTGACACTGGCCTGTaGAATCTCTGGACTACAGGA +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTPDTGL*NLWTTG
Trigger: TCCTGTAGTCCAGAGATTCCACAGGCCAGTGTCAGG...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CTTAGCCGGGATACCAGGGTGGTAGGGCCTCTCTTTCCCCACGTATTCTCAGTGGCTCATCTGATCTTCTaGGAGAGTGCTACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSRDTRVVGPLFPHVFSVAHLIF*ESATCS
Trigger: AGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGC...CACTGAGAATACGTGGGGAAAGAGAGGCCCTACCACCCTGGTATCCCGGCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTGGCAGCTTGCATGGGTaGATGCCAGCAGAAACTAAG +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLGSLHG*MPAETK
Trigger: CTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCC...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GGGCTTAGCCGGGATACCAGGGTGGTAGGGCCTCTCTTTCCCCACGTATTCTCAATGTGTCCTTGTCGATaGGCTTTGGTGAGATTTCTA +
Preference number: 4 (lower is better)
Translates to: GLSRDTRVVGPLFPHVFSMCPCR*ALVRFL
Trigger: TAGAAATCTCACCAAAGCTCATCGACAAGGACACAT...TGAGAATACGTGGGGAAAGAGAGGCCCTACCACCCTGGTATCCCGGCTAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTACCCTCCTGAGAGATaGTCCTTCCTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLYPPER*SFLTQH
Trigger: GTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCTCACAAGGCCCACCTaGAGATTGATTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLTRPT*RLIWLL
Trigger: GAGCAGCCAAATCAATCTGCAGGTGGGCCTTGTGAG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCTCACAAGGCCCACCTaGAGATTGATTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLLTRPT*RLIWLL
Trigger: GAGCAGCCAAATCAATCTGCAGGTGGGCCTTGTGAG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTGGAGTTTCACCATGTTaGCCGGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLGVSPC*PGWSQT
Trigger: AGTTTGAGACCAGCCCGGGCAACATGGTGAAACTCC...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTGTAGGATGTTCTCACTaGCAAGGCCAAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLVGCSH*QGQRLP
Trigger: GGGAAGCCTTTGGCCTTGCCAGTGAGAACATCCTAC...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262039.9
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCCTGACACTGGCCTGTaGAATCTCTGGACTACAGGA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLPDTGL*NLWTTG
Trigger: TCCTGTAGTCCAGAGATTCCACAGGCCAGTGTCAGG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCTTCCCGTCTTGGTTTTaGTGGGTTTTGGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTFPSWF*WVLAGF
Trigger: GAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAA...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGACACATCCCATATGGTaGGGGCCACTTGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLTHPIW*GPLGHS
Trigger: GGAATGCCCAAGTGGCCCTCACCATATGGGATGTGT...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGGGCAGACCAGCAGCATaGGCTGCTGGTTGGCTATTT +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLGRPAA*AAGWLF
Trigger: AAATAGCCAACCAGCAGCTCATGCTGCTGGTCTGCC...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTATGGTGAGGGCCACTTaGGCATTCCTGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFMVRAT*AFLGRS
Trigger: TGACCTGCCCAGGAATGCCCAAGTGGCCCTCACCAT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACTCCAACAGAATAATGGTGAGGGCCACTTaGGCATTCCTGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SVLLPLQVVFQLGHSNRIMVRAT*AFLGRS
Trigger: TGACCTGCCCAGGAATGCCCAAGTGGCCCTCACCAT...TATTCTGTTGGAGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCGGTTTTGGTGGGTTTTaGCTGGCTTCTTTACCACAG +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTGFGGF*LASLPQ
Trigger: CTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACC...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCACTGGAAAGGGATCCTaGTTAAGACTCCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTTGKGS*LRLQER
Trigger: CCTCTCTTGGAGTCTTAACCAGGATCCCTTTCCAGT...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTACCACAGAAGGAAACTaGCACTCACAGATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLTTEGN*HSQILL
Trigger: CAGCAGGATCTGTGAGTGCCAGTTTCCTTCTGTGGT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTACTGGGCAAACTTGTaGATCTGTTCCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLYWANL*ICSTTA
Trigger: TGCAGTGGTGGAACAGATTCACAAGTTTGCCCAGTA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGTAGTGAAACTTCTCTaGTTCCCCCATCGCACCGTC +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRVVKLL*FPHRTV
Trigger: GACGGTGCGATGGGGGAAGCAGAGAAGTTTCACTAC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTCCTCCTACAGGCACTaGTTTTCCGGGACCATACAC +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLSSYRH*FSGTIH
Trigger: GTGTATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATCCTCCTACAGGCACTaGTTTTCCGGGACCATACAC +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRSSYRH*FSGTIH
Trigger: GTGTATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCGAGTGCTACTTGTTCTaGCAGGAGTTTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTECYLF*QEFLWV
Trigger: AACCCACAAAAACTCCTGGCAGAACAAGTAGCACTC...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTGGTTCTTGGATCTCCTaGAGAAGAATTCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLGSWIS*RRIQGS
Trigger: ACTCCCCTGAATTCTTCTGCAGGAGATCCAAGAACC...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTACTGGAAAGCCCATTTaGATAAGATTAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPTGKPI*IRLGWG
Trigger: GCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTACTGGAAAGCCCATTTaGATAAGATTAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLTGKPI*IRLGWG
Trigger: GCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCTCCGGGCAAGCTTGTaGTGTTTGCTCTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLLRASL*CLLSTK
Trigger: TTTAGTTGAGAGCAAACACCACAAGCTTGCCCGGAG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACTCTCGTGGCAGCATTaGGTTTCAGATCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLSWQH*VSDRGQ
Trigger: CTGACCACGATCTGAAACCCAATGCTGCCACGAGAG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTAGCACTAATCCCATTTaGCCCATTCTCACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSTNPI*PILTWC
Trigger: GCACCAAGTGAGAATGGGCCAAATGGGATTAGTGCT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCTGGAGGAAGAGGCTTTaGATCCCGACCCAAAATATA +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTWRKRL*IPTQNI
Trigger: TATATTTTGGGTCGGGATCCAAAGCCTCTTCCTCCA...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTGGTTTTGGTGGGTTTTaGCTGGCTTCTTTACCACAG +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLGFGGF*LASLPQ
Trigger: CTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACC...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCCGTCTTGGTTTTGGTaGGTTTTGGCTGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLPSWFW*VLAGFF
Trigger: AAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCCTTTCATTCCCGTCTTaGTTTTGGTGGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTLSFPS*FWWVLA
Trigger: AGCCAAAACCCACCAAAACCAAGACGGGAATGAAAG...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAAACTGTCATGGTGCTaGTGGGAGTGTCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLKLSWC*WECLLA
Trigger: TGCTAAGAGACACTCCCACCAGCACCATGACAGTTT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCCCAAGAGAGGGTTCTTaGATCTCCTGCAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTPREGS*ISCRRI
Trigger: AATTCTTCTGCAGGAGATCCAAGAACCCTCTCTTGG...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 72 bp CACCTGCAGATTGATTTGGCTGCTCAGGAGTGGGGATaGGGAATGTGCACATTTAATAAGGTTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLQIDLAAQEWG*GMCTFNKVPRR
Trigger: CCTCCTGGGAACCTTATTAAATGTGCACATTCCCAATCCCCACTCCTGAGCAGCCAAATCAATCTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 72 bp AGATTAGGGTGGGGCGACCAGCCTTCCACATGCACCTaGCAAACGTCATACATGATGCAACCAATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RLGWGDQPSTCT*QTSYMMQPIRN
Trigger: GTTTCTGATTGGTTGCATCATGTATGACGTTTGCAAGGTGCATGTGGAAGGCTGGTCGCCCCACCCTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 72 bp TCCTTGTCGATGAGCTTTGGTGAGATTTCTAACACCTaGGTGATAAAGGGTGGGCTTAGCCGGGATACCAGG +
Preference number: 4 (lower is better)
Translates to: SLSMSFGEISNT*VIKGGLSRDTR
Trigger: CCTGGTATCCCGGCTAAGCCCACCCTTTATCACCAAGGTGTTAGAAATCTCACCAAAGCTCATCGACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR TCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGGCAAGACGGCTCATCTaGTCTTCTGAGAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLARRLI*SSERVL
Trigger: TAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGC...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CTCTTTCCCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGCAAGACGGCTCATCTaGTCTTCTGAGAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LFPHVFSVLLPLQVVFQLARRLI*SSERVL
Trigger: TAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGC...AAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTCTGACACTGAACTCTaGCTATCCTTCTTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSDTEL*LSFLVG
Trigger: ACCTACCAAGAAGGATAGTCAGAGTTCAGTGTCAGA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCTCCAAGTATATAGGTaGTCACGCAATATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLLQVYR*SRNIQH
Trigger: GTGCTGGATATTGCGTGATCACCTATATACTTGGAG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACTGGCCCCTGTTCCCTaGCACTGGCCTGTGGAATCT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSELAPVP*HWPVES
Trigger: AGATTCCACAGGCCAGTGTCAGGGAACAGGGGCCAG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGTAGTGAAACTTCTCTaGTTCCCCCATCGCACCGTC +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDVVKLL*FPHRTV
Trigger: GACGGTGCGATGGGGGAAGCAGAGAAGTTTCACTAC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TCCTTGTCGATGAGCTTTGGTGAGATTTCTAACACCTTGGTGATAAAGGGTGGGTCCTCCTACAGGCACTaGTTTTCCGGGACCATACAC +
Preference number: 4 (lower is better)
Translates to: SLSMSFGEISNTLVIKGGSSYRH*FSGTIH
Trigger: GTGTATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGA...CCCACCCTTTATCACCAAGGTGTTAGAAATCTCACCAAAGCTCATCGACAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCAGACTTTCAAGTCATaGATCCCTTGGCGAAACATG +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPQTFKS*IPWRNM
Trigger: CATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGAGTGCTACTTGTTCTaGCAGGAGTTTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPECYLF*QEFLWV
Trigger: AACCCACAAAAACTCCTGGCAGAACAAGTAGCACTC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTAAAAGGTTATCCAGGTaGCTGTCTCCAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPKRLSR*LSPTPS
Trigger: ACTTGGAGTTGGAGACAGGCACCTGGATAACCTTTT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTACTGCTCACTCTGTGTaGCCCCCATTCCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFTAHSV*PPFLLP
Trigger: TGGTAGAAGGAATGGGGGGCACACAGAGTGAGCAGT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTTCAAATCCCAACTCTaGTCTCACCAGCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPFKSQL*SHQQLI
Trigger: GATAAGCTGCTGGTGAGAGCAGAGTTGGGATTTGAA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTATCTTCTGTTCTTATaGCTTCCCAGCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFYLLFL*LPSPGP
Trigger: GGGGCCAGGGCTGGGAAGGCATAAGAACAGAAGATA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTACCCAGGCTGCAGTaGAATGGTGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLPRLQ*NGAISA
Trigger: AGCTGAGATTGCACCATTGCACTGCAGCCTGGGTAA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATTACCCAGGCTGCAGTaGAATGGTGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLPRLQ*NGAISA
Trigger: AGCTGAGATTGCACCATTGCACTGCAGCCTGGGTAA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTGTAAACTGTCATGGTaGTGGTGGGAGTGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLCKLSW*WWECLL
Trigger: TAAGAGACACTCCCACCAGCACCATGACAGTTTACA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAACACATCATGGGCCATaGCTTAAAGCCACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRTHHGP*LKATVS
Trigger: TGACACCGTGGCTTTAAGGCATGGCCCATGATGTGT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TCCTTGTCGATGAGCTTTGGTGAGATTTCTAACACCTTGGTGATAAAGGGTGGGGTAGGATGTTCTCACTaGCAAGGCCAAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLSMSFGEISNTLVIKGGVGCSH*QGQRLP
Trigger: GGGAAGCCTTTGGCCTTGCCAGTGAGAACATCCTAC...CCCACCCTTTATCACCAAGGTGTTAGAAATCTCACCAAAGCTCATCGACAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTTCTCCATAGACATCTaGGGGTCAGGAACTTTCACT +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLFSIDI*GSGTFT
Trigger: AGTGAAAGTTCCTGACCCCCAGATGTCTATGGAGAA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCTCTCGTGGCAGCATTaGGTTTCAGATCGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLSWQH*VSDRGQ
Trigger: CTGACCACGATCTGAAACCCAATGCTGCCACGAGAG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCTCAGCTTCTCTAAGTaGTCACCCAGGTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLSFSK*SPRWDA
Trigger: AGCATCCCACCTGGGTGACCACTTAGAGAAGCTGAG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGGAGTCTGGTTCCTGTaGTCTAGTGCAGCCACTTAT +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRGVWFL*SSAATY
Trigger: ATAAGTGGCTGCACTAGACCACAGGAACCAGACTCC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTTGGCTGCTCAGGAGTaGGGATTGGGAATGTGCACA +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLAAQE*GLGMCT
Trigger: TGTGCACATTCCCAATCCCCACTCCTGAGCAGCCAA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTATTTGTAAACTGTCATaGTGCTGGTGGGAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPICKLS*CWWECL
Trigger: GAGACACTCCCACCAGCACCATGACAGTTTACAAAT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCCAAGAGAGGGTTCTTaGATCTCCTGCAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPPREGS*ISCRRI
Trigger: AATTCTTCTGCAGGAGATCCAAGAACCCTCTCTTGG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACTAGCATCACTTCTGCTTaGCAAGACGGCTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: PTYSQCCSLSKWFFNLVTSITSA*QDGSSD
Trigger: ATCAGATGAGCCGTCTTGCCAAGCAGAAGTGATGCT...AGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTCAGAGCATGTCTCTTaGTATAGTCCTGAGAACTTC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSEHVS*YSPENF
Trigger: GAAGTTCTCAGGACTATATCAAGAGACATGCTCTGA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262039.9
CDS-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTATGTGTCCTTGTCGATaGGCTTTGGTGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFMCPCR*ALVSLA
Trigger: TGCCAAGCTCACCAAAGCTCATCGACAAGGACACAT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATATGTGTCCTTGTCGATaGGCTTTGGTGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDMCPCR*ALVSLA
Trigger: TGCCAAGCTCACCAAAGCTCATCGACAAGGACACAT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCTCAACAATGCTTGGCTaGATCTTCTCATTACGTTCA +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTSTMLG*IFSLRS
Trigger: TGAACGTAATGAGAAGATTCAGCCAAGCATTGTTGA...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCCTTGCTGGTTACTCTaGAGTCTCCAATATACAAAG +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLPCWLL*SLQYTK
Trigger: CTTTGTATATTGGAGACTTCAGAGTAACCAGCAAGG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCTGGCATTACAGGCATaGGCCAGCCAAATTCTAGTT +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLALQA*ASQILV
Trigger: AACTAGAATTTGGCTGGCTCATGCCTGTAATGCCAG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAACTCACAGATCCTGCTaGAGTTACTGGAAAGGGATC +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRTHRSC*SYWKGI
Trigger: GATCCCTTTCCAGTAACTTCAGCAGGATCTGTGAGT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GCCTGGACAAGCCACAAGGCCCCAATAAAGGGTTCAGGTTTCATTCAAATTGTTGAGGCAGGAGTGGTTTaGCATTCAGACAAATGGCCT +
Preference number: 4 (lower is better)
Translates to: AWTSHKAPIKGSGFIQIVEAGVV*HSDKWP
Trigger: AGGCCATTTGTCTGAATGTCAAACCACTCCTGCCTC...AACAATTTGAATGAAACCTGAACCCTTTATTGGGGCCTTGTGGCTTGTCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR GCA 90 bp TCCCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACAGACTTTCAAGTCATaGATCCCTTGGCGAAACATG +
Preference number: 4 (lower is better)
Translates to: SPRILSAAPSPSGFSTWSQTFKS*IPWRNM
Trigger: CATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTG...TGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCCAGTGTTGAGTTTTTaGAGGCTCTCGATATCAAGA +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPPVLSF*RLSISR
Trigger: TCTTGATATCGAGAGCCTGCAAAAACTCAACACTGG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCAAGCAATTCTTGAACTaGAGAAGAATGAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTKQFLN*RRMSHH
Trigger: GTGATGGCTCATTCTTCTGCAGTTCAAGAATTGCTT...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAATGGTGAGGGCCACTTaGGCATTCCTGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSMVRAT*AFLGRS
Trigger: TGACCTGCCCAGGAATGCCCAAGTGGCCCTCACCAT...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAAGTCATGCATCCCTTaGCGAAACATGCCGTATTTT +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLKSCIP*RNMPYF
Trigger: AAAATACGGCATGTTTCGCCAAGGGATGCATGACTT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACTCCGGGCAAGCTTGTaGTGTTTGCTCTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLRASL*CLLSTK
Trigger: TTTAGTTGAGAGCAAACACCACAAGCTTGCCCGGAG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTTAACTGATCTCTCGTaGCAGCATTGGGTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLTDLS*QHWVSD
Trigger: ATCTGAAACCCAATGCTGCCACGAGAGATCAGTTAA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCGGGCTGGTTATAATTTaGGAGCTATCTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTGLVII*ELSISA
Trigger: TGCAGAAATAGATAGCTCCCAAATTATAACCAGCCC...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCCATGTTTTGTACTGGTaGCTAACACCTTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTHVLYW*LTPYKV
Trigger: CACCTTATAAGGTGTTAGCCACCAGTACAAAACATG...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGCAGCAAAAAGAGCATaGACACTCTCATCAATCAGA +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPAAKRA*TLSSIR
Trigger: TCTGATTGATGAGAGTGTCCATGCTCTTTTTGCTGC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATCTTACAGTGGAGTCTaGTTCCTGTGGTCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRSYSGV*FLWSSA
Trigger: TGCACTAGACCACAGGAACCAGACTCCACTGTAAGA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGATACCTGGTTGGGTTaGATGACCAGCGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDDTWLG*MTSVTE
Trigger: CTCTGTTACGCTGGTCATCCAACCCAACCAGGTATC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGCCAGAGTTTTAGAATaGCAATACTGGGATGCTATG +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPARVLE*QYWDAM
Trigger: CATAGCATCCCAGTATTGCCATTCTAAAACTCTGGC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCTGGTTCATGCAGAAATaGGTTACTCTACCCATTTTG +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTWFMQK*VTLPIL
Trigger: CAAAATGGGTAGAGTAACCCATTTCTGCATGAACCA...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTTCCCGTCTTGGTTTTaGTGGGTTTTGGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDFPSWF*WVLAGF
Trigger: GAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAAAACTGTCATGGTGCTaGTGGGAGTGTCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRKLSWC*WECLLA
Trigger: TGCTAAGAGACACTCCCACCAGCACCATGACAGTTT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTTCCAGATCTTAAGCTaGACGTTGATATCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPFQILS*TLISRS
Trigger: TGACCTGGATATCAACGTCCAGCTTAAGATCTGGAA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398870.7
CDS-3UTR CCA 90 bp GCCTGGACAAGCCACAAGGCCCCAATAAAGGGTTCAGGTTTCATTCAAATTGTTAGGTTCCTGCTCTCATaGAACTTGCATCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AWTSHKAPIKGSGFIQIVRFLLS*NLHPEG
Trigger: CCCTTCAGGATGCAAGTTCCATGAGAGCAGGAACCT...AACAATTTGAATGAAACCTGAACCCTTTATTGGGGCCTTGTGGCTTGTCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTAGTTTTTGTGGGTTCTaGTCCATCTGCTTCTACATT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSFCGF*SICFYI
Trigger: AATGTAGAAGCAGATGGATCAGAACCCACAAAAACT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCCTTATCATCACACTTaGCACATCGAAATTCAACCA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLPYHHT*HIEIQP
Trigger: TGGTTGAATTTCGATGTGTCAAGTGTGATGATAAGG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCACAATAATATTTAACTaGTCTCTCGTGGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTTIIFN*SLVAAL
Trigger: CAATGCTGCCACGAGAGATCAGTTAAATATTATTGT...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGCCTGTTTGGCCTCTTaGGGTAGATCCCAATTAACA +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDACLAS*GRSQLT
Trigger: TGTTAATTGGGATCTACCTCAAGAGGCCAAACAGGC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTACTGGGCAAACTTGTaGATCTGTTCCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDYWANL*ICSTTA
Trigger: TGCAGTGGTGGAACAGATTCACAAGTTTGCCCAGTA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTTGAGCCAAGCATCTTaGTGGGTCAATCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLSQAS*WVNPSF
Trigger: GAAACTGGGATTGACCCATCAAGATGCTTGGCTCAA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAACCCAAGGAAAGTATaGATATGTGGCATGATGACA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLNPRKV*ICGMMT
Trigger: TGTCATCATGCCACATATTCATACTTTCCTTGGGTT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTGGGGAGTCCATAAAGTaGAAGCAGGTTAATAAAGAA +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLGESIK*KQVNKE
Trigger: TTCTTTATTAACCTGCTTTCACTTTATGGACTCCCC...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACAATGTTCCTAACATGTaGAGAAACCAAAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PHVFSVLLPLQVVFQLGHNVPNM*RNQSCH
Trigger: GTGACAGCTTTGGTTTCTTCACATGTTAGGAACATT...GTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGAAAAGGTTATCCAGGTaGCTGTCTCCAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLKRLSR*LSPTPS
Trigger: ACTTGGAGTTGGAGACAGGCACCTGGATAACCTTTT...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAAATCTGTTCCACCACTaGAGCAAAAAGAGCATGGAC +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRNLFHH*SKKSMD
Trigger: GTCCATGCTCTTTTTGCTGCAGTGGTGGAACAGATT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATTCAAATCCCAACTCTaGTCTCACCAGCAGCTTATC +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRFKSQL*SHQQLI
Trigger: GATAAGCTGCTGGTGAGAGCAGAGTTGGGATTTGAA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTAAACTAGTGTTGAAATaGAATGTACCAGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPKLVLK*NVPAHS
Trigger: GCTATGGGCTGGTACATTGCATTTCAACACTAGTTT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCCTGTAAAGTTGAGCTaGAGACATAGACAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDPVKLS*RHRQAG
Trigger: GCCAGCTTGTCTATGTCTGCAGCTCAACTTTACAGG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TCCTTGTCGATGAGCTTTGGTGAGATTTCTAACACCTTGGTGATAAAGGGTGGGACGTATTCTCAGTGCTaGTCCCTCTCCAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SLSMSFGEISNTLVIKGGTYSQC*SLSKWF
Trigger: AAACCACTTGGAGAGGGAGCAGCACTGAGAATACGT...CCCACCCTTTATCACCAAGGTGTTAGAAATCTCACCAAAGCTCATCGACAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAGCCATGTTTTGTACTaGTGGCTAACACCTTATAAG +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLSHVLY*WLTPYK
Trigger: CTTATAAGGTGTTAGCCACCAGTACAAAACATGGCT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATGGAGGAAGAGGCTTTaGATCCCGACCCAAAATATA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRWRKRL*IPTQNI
Trigger: TATATTTTGGGTCGGGATCCAAAGCCTCTTCCTCCA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTGTTTACGGAACTCTTaGTACTGCTCACTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLCLRNS*YCSLCV
Trigger: CACACAGAGTGAGCAGTACCAAGAGTTCCGTAAACA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTCTTACAGTGGAGTCTaGTTCCTGTGGTCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFSYSGV*FLWSSA
Trigger: TGCACTAGACCACAGGAACCAGACTCCACTGTAAGA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCTGTATTTTGGAATATaGGTTATCTACCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLYFGI*VIYPQG
Trigger: ACCCTGAGGGTAGATAACCCATATTCCAAAATACAG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTGGTTCATGCAGAAATaGGTTACTCTACCCATTTTG +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLWFMQK*VTLPIL
Trigger: CAAAATGGGTAGAGTAACCCATTTCTGCATGAACCA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAATGATTAGGGAGGTCTaGGTTTCTTGTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRMIREV*VSCGDR
Trigger: TCTGTCACCACAAGAAACCCAGACCTCCCTAATCAT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATAGGAGTTCTGAGGTTTaGGGAAATGCAGTTGTACCG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDRSSEV*GNAVVP
Trigger: CGGTACAACTGCATTTCCCCAAACCTCAGAACTCCT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTTGGTGGGTTTTGGCTaGCTTCTTTACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLVGFG*LLYHRL
Trigger: CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTACATTTTCAAGATGGTaGCTTCATCTTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPTFSRW*LHLPFS
Trigger: AGAGAAGGGAAGATGAAGCCACCATCTTGAAAATGT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTCAAGACAAATGGCCTGCCTaGACAAGCCACAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TDQGVRKGFSKEMPLELQDKWPA*TSHKAP
Trigger: TGGGGCCTTGTGGCTTGTCCAGGCAGGCCATTTGTC...TTGAAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTGCTCATCTGATCTTCTaGGAGAGTGCTACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFAHLIF*ESATCS
Trigger: AGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGC...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGCTCATCTGATCTTCTaGGAGAGTGCTACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDAHLIF*ESATCS
Trigger: AGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTCTGACACTGAACTCTaGCTATCCTTCTTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFSDTEL*LSFLVG
Trigger: ACCTACCAAGAAGGATAGTCAGAGTTCAGTGTCAGA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCCATCTTGTACTAAATaGTTTGTAGGATGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPPSCTK*FVGCSH
Trigger: GTGAGAACATCCTACAAAGCATTTAGTACAAGATGG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262039.9
CDS-3UTR GCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCAGACTTTCAAGTCATaGATCCCTTGGCGAAACATG +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFQTFKS*IPWRNM
Trigger: CATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TCCTTGTCGATGAGCTTTGGTGAGATTTCTAACACCTTGGTGATAAAGGGTGGGGAGTGCTACTTGTTCTaGCAGGAGTTTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLSMSFGEISNTLVIKGGECYLF*QEFLWV
Trigger: AACCCACAAAAACTCCTGGCAGAACAAGTAGCACTC...CCCACCCTTTATCACCAAGGTGTTAGAAATCTCACCAAAGCTCATCGACAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATACAAATGTCTGTTGTaGAGCCAGCAAAGAACGCAT +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRYKCLL*SQQRTH
Trigger: ATGCGTTCTTTGCTGGCTGCACAACAGACATTTGTA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCCTATGTGGAAGAGTTTaGCTGTTTTTGTTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTLCGRV*LFLLAK
Trigger: TTTTGCTAACAAAAACAGGCAAACTCTTCCACATAG...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCATTCTCTGAAACTGTaGCACAATTTTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPHSLKL*HNFTFI
Trigger: GATGAAGGTAAAATTGTGGCACAGTTTCAGAGAATG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTAAGATGATACACTTTTaGCTTCCAGTTAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPKMIHF*LPVSRV
Trigger: AACTCTGCTAACTGGAAGGCAAAAGTGTATCATCTT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATGGGGATTGGGAATGTaGACATTTAATAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRWGLGM*TFNKVP
Trigger: GGGAACCTTATTAAATGTGCACATTCCCAATCCCCA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATATCTTCTGTTCTTATaGCTTCCCAGCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEYLLFL*LPSPGP
Trigger: GGGGCCAGGGCTGGGAAGGCATAAGAACAGAAGATA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCAAATTCTATGGTTCATaGAGAAATGGGTTACTCTAC +
Preference number: 4 (lower is better)
Translates to: ATVYPPERCSFLTQHASTKFYGS*RNGLLY
Trigger: GTAGAGTAACCCATTTCTGCATGAACCATAGAATTT...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CTCTTTCCCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTAAGTCATGCATCCCTTaGCGAAACATGCCGTATTTT +
Preference number: 4 (lower is better)
Translates to: LFPHVFSVLLPLQVVFQLKSCIP*RNMPYF
Trigger: AAAATACGGCATGTTTCGCCAAGGGATGCATGACTT...AAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTTCTCCATAGACATCTaGGGGTCAGGAACTTTCACT +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDFSIDI*GSGTFT
Trigger: AGTGAAAGTTCCTGACCCCCAGATGTCTATGGAGAA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAGTTCCAAGGCCTGTTTaGCCTCTTGAGGTAGATCCC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEVPRPV*PLEVDP
Trigger: GGGATCTACCTCAAGAGGCCAAACAGGCCTTGGAAC...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTCATATTTGAGAGCCTaGACCAATTGTAATAGGTAC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSYLRA*TNCNRY
Trigger: GTACCTATTACAATTGGTCCAGGCTCTCAAATATGA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTGCATCCTGAAGGGGAGAAGATGATGATAAGAACTCAACAAGCTCTAGGAGAGGCCACAGGAACTGACTaGATAAACTGCATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LHPEGEKMMIRTQQALGEATGTD*INCMKP
Trigger: TGGCTTCATGCAGTTTATCCAGTCAGTTCCTGTGGC...CTCTCCTAGAGCTTGTTGAGTTCTTATCATCATCTTCTCCCCTTCAGGATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTGTTTACGGAACTCTTaGTACTGCTCACTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFCLRNS*YCSLCV
Trigger: CACACAGAGTGAGCAGTACCAAGAGTTCCGTAAACA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGAAAGTATGAATATGTaGCATGATGACACAACACCT +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPESMNM*HDDTTP
Trigger: AGGTGTTGTGTCATCATGCCACATATTCATACTTTC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACTCAGCTTCTCTAAGTaGTCACCCAGGTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSELSFSK*SPRWDA
Trigger: AGCATCCCACCTGGGTGACCACTTAGAGAAGCTGAG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCTCAGGAGTGGGGATTaGGAATGTGCACATTTAATA +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLRSGD*ECAHLI
Trigger: TATTAAATGTGCACATTCCCAATCCCCACTCCTGAG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTATAACAAGAGATACCTaGTTGGGTTGGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFITRDT*LGWMTS
Trigger: GCTGGTCATCCAACCCAACCAGGTATCTCTTGTTAT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTATGATTAGGGAGGTCTaGGTTTCTTGTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFMIREV*VSCGDR
Trigger: TCTGTCACCACAAGAAACCCAGACCTCCCTAATCAT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAGAATGCCTAACTTCCTaGGAATGCAGCCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEECLTS*ECSPVG
Trigger: ACCCACTGGGCTGCATTCCCAGGAAGTTAGGCATTC...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTATTTGTAAACTGTCATaGTGCTGGTGGGAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFICKLS*CWWECL
Trigger: GAGACACTCCCACCAGCACCATGACAGTTTACAAAT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACTAGTGGTTTTTCAACTTaGTCACTCCAACAGAATAGC +
Preference number: 4 (lower is better)
Translates to: PTYSQCCSLSKWFFNLVTSGFST*SLQQNS
Trigger: GCTATTCTGTTGGAGTGACCAAGTTGAAAAACCACT...AGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CCA 90 bp TCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACTCCAACAGAATATGCTCCCTCTCCAAGTaGTTTTTCAACTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SVLLPLQVVFQLGHSNRICSLSK*FFNLVT
Trigger: AGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCA...TATTCTGTTGGAGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591011.1
3UTR CAA 72 bp AGGTCACTTTCATTCCCGTCTTGGTTTTGGTGGGTTTaGGCTGGCTTCTTTACCACAGACTGTTTTATCAGC +
Preference number: 4 (lower is better)
Translates to: RSLSFPSWFWWV*AGFFTTDCFIS
Trigger: GCTGATAAAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAAAGTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 72 bp AACCCCAATGGACAAAGGTTCCTGCTCTCATGGAACTaGCATCCTGAAGGGGAGAAGATGATGATAAGAACT +
Preference number: 4 (lower is better)
Translates to: NPNGQRFLLSWN*HPEGEKMMIRT
Trigger: AGTTCTTATCATCATCTTCTCCCCTTCAGGATGCAAGTTCCATGAGAGCAGGAACCTTTGTCCATTGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAGCAAGACGGCTCATCTaGTCTTCTGAGAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSARRLI*SSERVL
Trigger: TAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGC...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAGTCGATGAGCTTTGGTaGGCTTGGCAAGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAVDELW*AWQDGS
Trigger: TGAGCCGTCTTGCCAAGCTCACCAAAGCTCATCGAC...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACCTTATCATCACACTTaGCACATCGAAATTCAACCA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRPYHHT*HIEIQP
Trigger: TGGTTGAATTTCGATGTGTCAAGTGTGATGATAAGG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATATAATTAGCCAGTGTTaGGTTTTTGCAGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDIISQC*VFAGSR
Trigger: TCGAGAGCCTGCAAAAACTCAACACTGGCTAATTAT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTATAATTAGCCAGTGTTaGGTTTTTGCAGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFIISQC*VFAGSR
Trigger: TCGAGAGCCTGCAAAAACTCAACACTGGCTAATTAT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTGCATCCTGAAGGGGAGAAGATGATGATAAGAACTCAACAAGCTCTAGGAGAGTTCAGCCACAGGAACTaGCTGGATAAACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: LHPEGEKMMIRTQQALGEFSHRN*LDKLHE
Trigger: TTCATGCAGTTTATCCAGTCAGTTCCTGTGGCTGAA...CTCTCCTAGAGCTTGTTGAGTTCTTATCATCATCTTCTCCCCTTCAGGATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp TTGCATCCTGAAGGGGAGAAGATGATGATAAGAACTCAACAAGCTCTAGGAGAGCTCCAAGTATATAGGTaGTCACGCAATATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LHPEGEKMMIRTQQALGELQVYR*SRNIQH
Trigger: GTGCTGGATATTGCGTGATCACCTATATACTTGGAG...CTCTCCTAGAGCTTGTTGAGTTCTTATCATCATCTTCTCCCCTTCAGGATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAAAGTATGCCAAATCCTaGAATAGGAGATGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRKYAKS*NRRCKC
Trigger: ACACTTGCATCTCCTATTTCAGGATTTGGCATACTT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAAACCCAAGGAAAGTATaGATATGTGGCATGATGACA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRNPRKV*ICGMMT
Trigger: TGTCATCATGCCACATATTCATACTTTCCTTGGGTT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTCCTATCTCATCCTGTaGCTAAGAATGCCTAACTTC +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFSYLIL*LRMPNF
Trigger: GAAGTTAGGCATTCTTAGTCACAGGATGAGATAGGA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAACCCCATCGCACCGTCTaGAAAGGTACCACCTACAGC +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEPHRTV*KGTTYS
Trigger: GCTGTAGGTGGTACCTTTGCAGACGGTGCGATGGGG...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTTTATCTGGTTCAAGTaGAATATCTGGAATGTTTGC +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPFIWFK*NIWNVC
Trigger: GCAAACATTCCAGATATTGCACTTGAACCAGATAAA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCTGGATCAGGTGGTATaGATTCTTATAAGTGAAATA +
Preference number: 4 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLDQVV*ILISEI
Trigger: TATTTCACTTATAAGAATGCATACCACCTGATCCAG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAAATTCTATGGTTCATaGAGAAATGGGTTACTCTAC +
Preference number: 4 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLKFYGS*RNGLLY
Trigger: GTAGAGTAACCCATTTCTGCATGAACCATAGAATTT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCTTCCTATCTTAAGCTaGACGTTGATATCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLPILS*TLISRS
Trigger: TGACCTGGATATCAACGTCCAGCTTAAGATAGGAAG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262039.9
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGATGGTGAGGGCCACTTaGGCATTCCTGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLMVRAT*AFLGRS
Trigger: TGACCTGCCCAGGAATGCCCAAGTGGCCCTCACCAT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTTAACTGATCTCTCGTaGCAGCATTGGGTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLTDLS*QHWVSD
Trigger: ATCTGAAACCCAATGCTGCCACGAGAGATCAGTTAA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGGGATTAAAGCTGAATaGACCACATACCCACAAATG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDGIKAE*TTYPQM
Trigger: CATTTGTGGGTATGTGGTCCATTCAGCTTTAATCCC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCTGTATTTTGGAATATaGGTTATCTACCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLYFGI*VIYPQG
Trigger: ACCCTGAGGGTAGATAACCCATATTCCAAAATACAG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGCCAGAGTTTTAGAATaGCAATACTGGGATGCTATG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDARVLE*QYWDAM
Trigger: CATAGCATCCCAGTATTGCCATTCTAAAACTCTGGC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 72 bp TCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTaGAGCTGCAGACATAGACAAGCTGGCAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: SKSFANKEQPVK*SCRHRQAGSLH
Trigger: ATGCAAGCTGCCAGCTTGTCTATGTCTGCAGCTCAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAAACACATCCCATATGGTaGGGGCCACTTGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGETHPIW*GPLGHS
Trigger: GGAATGCCCAAGTGGCCCTCACCATATGGGATGTGT...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTAGTTTTTGTGGGTTCTaGTCCATCTGCTTCTACATT +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFSFCGF*SICFYI
Trigger: AATGTAGAAGCAGATGGATCAGAACCCACAAAAACT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACTCCAACAGAATAAGTTTTTGTGGGTTCTaGTCCATCTGCTTCTACATT +
Preference number: 4 (lower is better)
Translates to: SVLLPLQVVFQLGHSNRISFCGF*SICFYI
Trigger: AATGTAGAAGCAGATGGATCAGAACCCACAAAAACT...TATTCTGTTGGAGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGTCGATGAGCTTTGGTaGGCTTGGCAAGACGGCTCA +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLVDELW*AWQDGS
Trigger: TGAGCCGTCTTGCCAAGCTCACCAAAGCTCATCGAC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACAGCTTGTCCATGAGTaGAATGATTTGAAGAATAAG +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRQLVHE*NDLKNK
Trigger: CTTATTCTTCAAATCATTTCACTCATGGACAAGCTG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATTGAGCCAAGCATCTTaGTGGGTCAATCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSELSQAS*WVNPSF
Trigger: GAAACTGGGATTGACCCATCAAGATGCTTGGCTCAA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATAGGTTACTGCTGTCCTaGTATGAAGATATAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDRLLLS*YEDIRG
Trigger: TCCTCTTATATCTTCATATCAGGACAGCAGTAACCT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATTACTCTACCCATTTTaGGCTTATTTCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLLYPF*AYFHFS
Trigger: GGAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGGCAGACCAGCAGCATaGGCTGCTGGTTGGCTATTT +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLGRPAA*AAGWLF
Trigger: AAATAGCCAACCAGCAGCTCATGCTGCTGGTCTGCC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAACTCACAGATCCTGCTaGAGTTACTGGAAAGGGATC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSETHRSC*SYWKGI
Trigger: GATCCCTTTCCAGTAACTTCAGCAGGATCTGTGAGT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAGGCAGCTTGCATGGGTaGATGCCAGCAGAAACTAAG +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAGSLHG*MPAETK
Trigger: CTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCC...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAAGTGGGTGGTCATCTTaGAAATATCACCAACGCTCC +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSSGWSS*KYHQRS
Trigger: GGAGCGTTGGTGATATTTTCAAGATGACCACCCACT...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCAAGCTTGTGGTGTTTaGTCTCAACTAAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDQACGV*SQLNSP
Trigger: TGGAGAATTTAGTTGAGAGCAAACACCACAAGCTTG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAACTGACTGGATAAACTaGATGAAGCCATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRTDWIN*MKPCFV
Trigger: TACAAAACATGGCTTCATGCAGTTTATCCAGTCAGT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCATTCTCTGAAACTGTaGCACAATTTTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLHSLKL*HNFTFI
Trigger: GATGAAGGTAAAATTGTGGCACAGTTTCAGAGAATG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAAAGATGATACACTTTTaGCTTCCAGTTAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRKMIHF*LPVSRV
Trigger: AACTCTGCTAACTGGAAGGCAAAAGTGTATCATCTT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATACCCTCCTGAGAGATaGTCCTTCCTCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAYPPER*SFLTQH
Trigger: GTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACCCAAAGTTACACTATaGAGTGGGTCCACTAGACTC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEPKVTL*SGSTRL
Trigger: GAGTCTAGTGGACCCACTGCATAGTGTAACTTTGGG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACCTGTAAAGTTGAGCTaGAGACATAGACAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEPVKLS*RHRQAG
Trigger: GCCAGCTTGTCTATGTCTGCAGCTCAACTTTACAGG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATTACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTTTCAGACAAATGGCCTaGCTGGACAAGCCACAAGGC +
Preference number: 4 (lower is better)
Translates to: ITDQGVRKGFSKEMPLELFRQMA*LDKPQG
Trigger: GCCTTGTGGCTTGTCCAGGCAGGCCATTTGTCTGAA...AAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAGTTCCAAGGCCTGTTTaGCCTCTTGAGGTAGATCCC +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAVPRPV*PLEVDP
Trigger: GGGATCTACCTCAAGAGGCCAAACAGGCCTTGGAAC...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTGGGCTGGTTATAATTTaGGAGCTATCTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFGLVII*ELSISA
Trigger: TGCAGAAATAGATAGCTCCCAAATTATAACCAGCCC...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCATGTTTTGTACTGGTaGCTAACACCTTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFHVLYW*LTPYKV
Trigger: CACCTTATAAGGTGTTAGCCACCAGTACAAAACATG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATAGCCATGTTTTGTACTaGTGGCTAACACCTTATAAG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDSHVLY*WLTPYK
Trigger: CTTATAAGGTGTTAGCCACCAGTACAAAACATGGCT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAGCCACAGGAACTGACTaGATAAACTGCATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEATGTD*INCMKP
Trigger: TGGCTTCATGCAGTTTATCCAGTCAGTTCCTGTGGC...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGAAAGTATGAATATGTaGCATGATGACACAACACCT +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRESMNM*HDDTTP
Trigger: AGGTGTTGTGTCATCATGCCACATATTCATACTTTC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGGCATCGGAATCCCCTaGGAAAACTCACAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLGIGIP*ENSQGP
Trigger: TGGGCCTTGTGAGTTTTCCCAGGGGATTCCGATGCC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAGGAGTTCTGAGGTTTaGGGAAATGCAGTTGTACCG +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSERSSEV*GNAVVP
Trigger: CGGTACAACTGCATTTCCCCAAACCTCAGAACTCCT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAACTGGAAAGGGATCCTaGTTAAGACTCCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSETGKGS*LRLQER
Trigger: CCTCTCTTGGAGTCTTAACCAGGATCCCTTTCCAGT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAGCAAGACGGCTCATCTaGTCTTCTGAGAGAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAARRLI*SSERVL
Trigger: TAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGC...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATACAATAATATTTAACTaGTCTCTCGTGGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDTIIFN*SLVAAL
Trigger: CAATGCTGCCACGAGAGATCAGTTAAATATTATTGT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACTCCAAGTATATAGGTaGTCACGCAATATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSELQVYR*SRNIQH
Trigger: GTGCTGGATATTGCGTGATCACCTATATACTTGGAG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATACTGTTTACCCTCCTaGGAGATGCTCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAYCLPS*EMLLPH
Trigger: GTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTGCTTGAAATATCACTaGACTTGTCACCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDCLKYH*TCHQRS
Trigger: ACTTCTTTGGTGACAAGTTCAGTGATATTTCAAGCA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCTACCATTATCTCAGTaGAAAATGAAAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLPLSQ*KMKAGR
Trigger: TCTTCCAGCTTTCATTTTTCACTGAGATAATGGTAG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAATCCTCCTACAGGCACTaGTTTTCCGGGACCATACAC +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGESSYRH*FSGTIH
Trigger: GTGTATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGA...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCACAGACTTTCAAGTCATaGATCCCTTGGCGAAACATG +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSQTFKS*IPWRNM
Trigger: CATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTG...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAGAGTGCTACTTGTTCTaGCAGGAGTTTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSECYLF*QEFLWV
Trigger: AACCCACAAAAACTCCTGGCAGAACAAGTAGCACTC...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACTATGTGGAAGAGTTTaGCTGTTTTTGTTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLCGRV*LFLLAK
Trigger: TTTTGCTAACAAAAACAGGCAAACTCTTCCACATAG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGACTGCTCACTCTGTGTaGCCCCCATTCCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLTAHSV*PPFLLP
Trigger: TGGTAGAAGGAATGGGGGGCACACAGAGTGAGCAGT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAATCTGTTCCACCACTaGAGCAAAAAGAGCATGGAC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSENLFHH*SKKSMD
Trigger: GTCCATGCTCTTTTTGCTGCAGTGGTGGAACAGATT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCTGGATCAGGTGGTATaGATTCTTATAAGTGAAATA +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLLDQVV*ILISEI
Trigger: TATTTCACTTATAAGAATGCATACCACCTGATCCAG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATGTAAACTGTCATGGTaGTGGTGGGAGTGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSECKLSW*WWECLL
Trigger: TAAGAGACACTCCCACCAGCACCATGACAGTTTACA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAACACATCATGGGCCATaGCTTAAAGCCACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKATHHGP*LKATVS
Trigger: TGACACCGTGGCTTTAAGGCATGGCCCATGATGTGT...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTCAATGCTCTCATGGAACTTaGATCCTGAAGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TDQGVRKGFSKEMPLELQCSHGT*ILKGRR
Trigger: TCTTCTCCCCTTCAGGATGCAAGTTCCATGAGAGCA...TTGAAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAAGTAGGATGTTCTCACTaGCAAGGCCAAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEVGCSH*QGQRLP
Trigger: GGGAAGCCTTTGGCCTTGCCAGTGAGAACATCCTAC...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CCA 90 bp CATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTAGCACTAATCCCATTTaGCCCATTCTCACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HRFRGKNHGHIQCMSTGSSTNPI*PILTWC
Trigger: GCACCAAGTGAGAATGGGCCAAATGGGATTAGTGCT...ACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTATCCAAAGTCTATGTaGAAGAGTTTGCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLYPKSM*KSLPVF
Trigger: AAAAACAGGCAAACTCTTCCACATAGACTTTGGATA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCACAGTTTTATCTaGTTCAAGTGCAATATCTGG +
Preference number: 4 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLFHSFI*FKCNIW
Trigger: CCAGATATTGCACTTGAACCAGATAAAACTGTGAAA...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTCAAAACACTTTAGCTAGGTaGTGTTCAAGGTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TDQGVRKGFSKEMPLELQNTLAR*CSRSRG
Trigger: GCCTCTGGACCTTGAACACCACCTAGCTAAAGTGTT...TTGAAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp GTACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTTTCAGCCACAGGAACTaGCTGGATAAACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: VHRFRGKNHGHIQCMSTGFSHRN*LDKLHE
Trigger: TTCATGCAGTTTATCCAGTCAGTTCCTGTGGCTGAA...ACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACTGGCATTACAGGCATaGGCCAGCCAAATTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKALALQA*ASQILV
Trigger: AACTAGAATTTGGCTGGCTCATGCCTGTAATGCCAG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATCCTATCTCATCCTGTaGCTAAGAATGCCTAACTTC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSESYLIL*LRMPNF
Trigger: GAAGTTAGGCATTCTTAGTCACAGGATGAGATAGGA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTCAATCTAAGATGGCGTTTTaGTCTTGTTGCCTAGTCTGC +
Preference number: 4 (lower is better)
Translates to: TDQGVRKGFSKEMPLELQSKMAF*SCCLVC
Trigger: GCAGACTAGGCAACAAGATCAAAACGCCATCTTAGA...TTGAAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR GCA 90 bp GTACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAAAAGGTTATCCAGGTaGCTGTCTCCAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VHRFRGKNHGHIQCMSTGKRLSR*LSPTPS
Trigger: ACTTGGAGTTGGAGACAGGCACCTGGATAACCTTTT...ACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR GCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTTTATCTGGTTCAAGTaGAATATCTGGAATGTTTGC +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFFIWFK*NIWNVC
Trigger: GCAAACATTCCAGATATTGCACTTGAACCAGATAAA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACCCAAAGTTACACTATaGAGTGGGTCCACTAGACTC +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAPKVTL*SGSTRL
Trigger: GAGTCTAGTGGACCCACTGCATAGTGTAACTTTGGG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAAGTCATGCATCCCTTaGCGAAACATGCCGTATTTT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEKSCIP*RNMPYF
Trigger: AAAATACGGCATGTTTCGCCAAGGGATGCATGACTT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGCCACAGGAACTGACTaGATAAACTGCATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: YIDSGVKTMGIYNVCLLVATGTD*INCMKP
Trigger: TGGCTTCATGCAGTTTATCCAGTCAGTTCCTGTGGC...TACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAAGCACTAATCCCATTTaGCCCATTCTCACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKASTNPI*PILTWC
Trigger: GCACCAAGTGAGAATGGGCCAAATGGGATTAGTGCT...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAAGCACTAATCCCATTTaGCCCATTCTCACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: YIDSGVKTMGIYNVCLLVSTNPI*PILTWC
Trigger: GCACCAAGTGAGAATGGGCCAAATGGGATTAGTGCT...TACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTATCCAAAGTCTATGTaGAAGAGTTTGCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFYPKSM*KSLPVF
Trigger: AAAAACAGGCAAACTCTTCCACATAGACTTTGGATA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATTTATTCAGCTTCATTaGTGGAGGAAGAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEFIQLH*WRKRLW
Trigger: CCAAAGCCTCTTCCTCCACCAATGAAGCTGAATAAA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTTCAAGTGCAATATCTaGAATGTTTGCATCAACCAT +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFFKCNI*NVCINH
Trigger: ATGGTTGATGCAAACATTCCAGATATTGCACTTGAA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGATACCTGGTTGGGTTaGATGACCAGCGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLDTWLG*MTSVTE
Trigger: CTCTGTTACGCTGGTCATCCAACCCAACCAGGTATC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTTTAGAATGGCAATACTaGGATGCTATGTTAACTTCT +
Preference number: 4 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLEWQY*DAMLTS
Trigger: AGAAGTTAACATAGCATCCCAGTATTGCCATTCTAA...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp AGTAGAGAGCATTGGAGGAAGAGGGCAGATATGTTATTACAGATCAAGGAGTTATGTCTGAGGCAGGAGTaGTTTGACATTCAGACAAAT +
Preference number: 4 (lower is better)
Translates to: SREHWRKRADMLLQIKELCLRQE*FDIQTN
Trigger: ATTTGTCTGAATGTCAAACCACTCCTGCCTCAGACA...TAACTCCTTGATCTGTAATAACATATCTGCCCTCTTCCTCCAATGCTCTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAAGTTTTTGTGGGTTCTaGTCCATCTGCTTCTACATT +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSSFCGF*SICFYI
Trigger: AATGTAGAAGCAGATGGATCAGAACCCACAAAAACT...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGCCTGTTTGGCCTCTTaGGGTAGATCCCAATTAACA +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLACLAS*GRSQLT
Trigger: TGTTAATTGGGATCTACCTCAAGAGGCCAAACAGGC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATCAACAATGCTTGGCTaGATCTTCTCATTACGTTCA +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSESTMLG*IFSLRS
Trigger: TGAACGTAATGAGAAGATTCAGCCAAGCATTGTTGA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATTCAGCCACAGGAACTaGCTGGATAAACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAFSHRN*LDKLHE
Trigger: TTCATGCAGTTTATCCAGTCAGTTCCTGTGGCTGAA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTACTCCAAGTATATAGGTaGTCACGCAATATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: YIDSGVKTMGIYNVCLLVLQVYR*SRNIQH
Trigger: GTGCTGGATATTGCGTGATCACCTATATACTTGGAG...TACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAGGGGAGTCCATAAAGTaGAAGCAGGTTAATAAAGAA +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEGESIK*KQVNKE
Trigger: TTCTTTATTAACCTGCTTTCACTTTATGGACTCCCC...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TATCCATTATTGGCTTTCCATAAAAAGAGGCATTTTCCAGTACAGAAGTGTGGGCAGTGGGTAACTTCATaGTCTATTTTGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: YPLLAFHKKRHFPVQKCGQWVTS*SILELR
Trigger: CCTCAACTCCAAAATAGATCATGAAGTTACCCACTG...CCCACACTTCTGTACTGGAAAATGCCTCTTTTTATGGAAAGCCAATAATGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ATTACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTATGGAACTTGCATCCTaGAGGGGAGAAGATGATGAT +
Preference number: 4 (lower is better)
Translates to: ITDQGVRKGFSKEMPLELMELAS*RGEDDD
Trigger: ATCATCATCTTCTCCCCTTCAGGATGCAAGTTCCAT...AAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAATTCTGTGTTGAAGCATaGAGCCTAGCCAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEFCVEA*SLANPS
Trigger: ACTTGGGTTGGCTAGGCTTCATGCTTCAACACAGAA...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp GGTTTTTCAACTTGGTCACTCCAACAGAATAGCTGGACTTCTTACATGATGGCTCCATCTTGTACTAAATaGTTTGTAGGATGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GFSTWSLQQNSWTSYMMAPSCTK*FVGCSH
Trigger: GTGAGAACATCCTACAAAGCATTTAGTACAAGATGG...AGCCATCATGTAAGAAGTCCAGCTATTCTGTTGGAGTGACCAAGTTGAAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACAAGCTTGTGGTGTTTaGTCTCAACTAAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEQACGV*SQLNSP
Trigger: TGGAGAATTTAGTTGAGAGCAAACACCACAAGCTTG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAATCACCCTTCAACAATaGTTGGCTGAATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEITLQQ*LAESSH
Trigger: ATGAGAAGATTCAGCCAAGCATTGTTGAAGGGTGAT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAACTGCCTTCATTAGATaGACCAACCGATCTACAAAT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSETAFIR*TNRSTN
Trigger: ATTTGTAGATCGGTTGGTGCATCTAATGAAGGCAGT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATTACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTAAAAGGTTATCCAGGTaGCTGTCTCCAACTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ITDQGVRKGFSKEMPLELKRLSR*LSPTPS
Trigger: ACTTGGAGTTGGAGACAGGCACCTGGATAACCTTTT...AAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR GCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAAACTAGTGTTGAAATaGAATGTACCAGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEKLVLK*NVPAHS
Trigger: GCTATGGGCTGGTACATTGCATTTCAACACTAGTTT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGGTTCTTGGATCTCCTaGAGAAGAATTCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLGSWIS*RRIQGS
Trigger: ACTCCCCTGAATTCTTCTGCAGGAGATCCAAGAACC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAAACCATCAGACTGTATaGTTTCCAAGGGTGAACTTT +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSNHQTV*FPRVNF
Trigger: AAAGTTCACCCTTGGAAAGCATACAGTCTGATGGTT...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGCCACAGGAACTGACTaGATAAACTGCATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLATGTD*INCMKP
Trigger: TGGCTTCATGCAGTTTATCCAGTCAGTTCCTGTGGC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTTGGTGGGTTTTGGCTaGCTTCTTTACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLLVGFG*LLYHRL
Trigger: CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAACATTTTCAAGATGGTaGCTTCATCTTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSETFSRW*LHLPFS
Trigger: AGAGAAGGGAAGATGAAGCCACCATCTTGAAAATGT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTGCATCCTGAAGGGGAGAAGATGATGATAAGAACTCAACAAGCTCTAGGAGAGACTTGTATCCATTATTaGCTTTCCATAAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LHPEGEKMMIRTQQALGETCIHY*LSIKRG
Trigger: GCCTCTTTTTATGGAAAGCCAATAATGGATACAAGT...CTCTCCTAGAGCTTGTTGAGTTCTTATCATCATCTTCTCCCCTTCAGGATGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CCA 90 bp CATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTATAAGTAGAGAGCATTaGAGGAAGAGGGCAGATATG +
Preference number: 4 (lower is better)
Translates to: HRFRGKNHGHIQCMSTGSISREH*RKRADM
Trigger: CATATCTGCCCTCTTCCTCCAATGCTCTCTACTTAT...ACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589056.5
3UTR CAA 72 bp ATGAAGTTAGCATATAACAAGAGATACCTGGTTGGGTaGGATGACCAGCGTAACAGAGCCTCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: MKLAYNKRYLVG*DDQRNRASNLS
Trigger: AGATAAATTTGAGGCTCTGTTACGCTGGTCATCCAACCCAACCAGGTATCTCTTGTTATATGCTAACTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
3UTR CAA 72 bp CTATGGTTCATGCAGAAATGGGTTACTCTACCCATTTaGAGCTTATTTCCATTTCTCCCATTTACATGCCAG +
Preference number: 4 (lower is better)
Translates to: LWFMQKWVTLPI*SLFPFLPFTCQ
Trigger: CTGGCATGTAAATGGGAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAACCCATTTCTGCATGAACCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAAGCTCATCTGATCTTCTaGGAGAGTGCTACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEAHLIF*ESATCS
Trigger: AGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGC...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATGCTTGAAATATCACTaGACTTGTCACCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSECLKYH*TCHQRS
Trigger: ACTTCTTTGGTGACAAGTTCAGTGATATTTCAAGCA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACTATCATATGGAGAATaGTTTTTGCTAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSELSYGE*FLLTPA
Trigger: TGCTGGAGTTAGCAAAAATCATTCTCCATATGATAG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATTACTCTACCCATTTTaGGCTTATTTCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSELLYPF*AYFHFS
Trigger: GGAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTGGAGTTGAGGAGTAGACAAGATTTGCTAATAGGTTCAGTATATGAGATGAGGGATCTATTTTGGAGTTaGGGAGTAGACAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: LELRSRQDLLIGSVYEMRDLFWS*GVDKIC
Trigger: GCAAATCTTGTCTACTCCTCAACTCCAAAATAGATC...CCTCATCTCATATACTGAACCTATTAGCAAATCTTGTCTACTCCTCAACTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCATATGCTTTCCAAGGGTaGACTTTATGGTATGTGAAT +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSYAFQG*TLWYVN
Trigger: ATTCACATACCATAAAGTTCACCCTTGGAAAGCATA...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAAAGCAGAAAATGGGAGTaGCTGTTAATGGTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGESRKWE*LLMVRF
Trigger: AAACCGCACCATTAACAGTCACTCCCATTTTCTGCT...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCACCATCTTGTACTAAATaGTTTGTAGGATGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSPSCTK*FVGCSH
Trigger: GTGAGAACATCCTACAAAGCATTTAGTACAAGATGG...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATACAAATGTCTGTTGTaGAGCCAGCAAAGAACGCAT +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAYKCLL*SQQRTH
Trigger: ATGCGTTCTTTGCTGGCTGCACAACAGACATTTGTA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp AGTAGAGAGCATTGGAGGAAGAGGGCAGATATGTTATTACAGATCAAGGAGTTAACTGACTGGATAAACTaGATGAAGCCATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SREHWRKRADMLLQIKELTDWIN*MKPCFV
Trigger: TACAAAACATGGCTTCATGCAGTTTATCCAGTCAGT...TAACTCCTTGATCTGTAATAACATATCTGCCCTCTTCCTCCAATGCTCTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATGGGGATTGGGAATGTaGACATTTAATAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAWGLGM*TFNKVP
Trigger: GGGAACCTTATTAAATGTGCACATTCCCAATCCCCA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCACAGTATCTAACACAGTaGTTTGTGAAAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSQYLTQ*FVKGSS
Trigger: TGAACTTCCTTTCACAAAGCACTGTGTTAGATACTG...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CCA 90 bp TTGGAGTTGAGGAGTAGACAAGATTTGCTAATAGGTTCAGTATATGAGATGAGGCATGTTTTGTACTGGTaGCTAACACCTTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: LELRSRQDLLIGSVYEMRHVLYW*LTPYKV
Trigger: CACCTTATAAGGTGTTAGCCACCAGTACAAAACATG...CCTCATCTCATATACTGAACCTATTAGCAAATCTTGTCTACTCCTCAACTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CCA 90 bp ATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTCCATGTTTTGTACTGGTaGCTAACACCTTATAAGGTG +
Preference number: 4 (lower is better)
Translates to: IDSGVKTMGIYNVCLLVVHVLYW*LTPYKV
Trigger: CACCTTATAAGGTGTTAGCCACCAGTACAAAACATG...GACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR CCA 90 bp CATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTAGCCATGTTTTGTACTaGTGGCTAACACCTTATAAG +
Preference number: 4 (lower is better)
Translates to: HRFRGKNHGHIQCMSTGSSHVLY*WLTPYK
Trigger: CTTATAAGGTGTTAGCCACCAGTACAAAACATGGCT...ACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGATTCAGCTTCATTGGTaGAGGAAGAGGCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLIQLHW*RKRLWI
Trigger: GATCCAAAGCCTCTTCCTCCACCAATGAAGCTGAAT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAGGGATTAAAGCTGAATaGACCACATACCCACAAATG +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAGIKAE*TTYPQM
Trigger: CATTTGTGGGTATGTGGTCCATTCAGCTTTAATCCC...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGCTTTCATTCCCGTCTTaGTTTTGGTGGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLLSFPS*FWWVLA
Trigger: AGCCAAAACCCACCAAAACCAAGACGGGAATGAAAG...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCATGTCACCAGAAAAAGTaGGTGGTCATCTTGAAAATA +
Preference number: 4 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSCHQKK*VVILKI
Trigger: TATTTTCAAGATGACCACCCACTTTTTCTGGTGACA...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAATCAGAGCATGTCTCTTaGTATAGTCCTGAGAACTTC +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGESEHVS*YSPENF
Trigger: GAAGTTCTCAGGACTATATCAAGAGACATGCTCTGA...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp ACAGATCAAGGAGTTAGAAAGGGCTTCTCTAAAGAGATGCCATTAGAACTTCAACAGCTTGTCCATGAGTaGAATGATTTGAAGAATAAG +
Preference number: 4 (lower is better)
Translates to: TDQGVRKGFSKEMPLELQQLVHE*NDLKNK
Trigger: CTTATTCTTCAAATCATTTCACTCATGGACAAGCTG...TTGAAGTTCTAATGGCATCTCTTTAGAGAAGCCCTTTCTAACTCCTTGATCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR TCA 90 bp TTGGAGTTGAGGAGTAGACAAGATTTGCTAATAGGTTCAGTATATGAGATGAGGAGCCCTGCAAAGATCTaGATAAATAACTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LELRSRQDLLIGSVYEMRSPAKI*INNFPE
Trigger: TTCTGGAAAGTTATTTATTCAGATCTTTGCAGGGCT...CCTCATCTCATATACTGAACCTATTAGCAAATCTTGTCTACTCCTCAACTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR GCA 90 bp GTACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTACTGACTGGATAAACTaGATGAAGCCATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: VHRFRGKNHGHIQCMSTGTDWIN*MKPCFV
Trigger: TACAAAACATGGCTTCATGCAGTTTATCCAGTCAGT...ACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR CCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAACTTCCTATCTTAAGCTaGACGTTGATATCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGELPILS*TLISRS
Trigger: TGACCTGGATATCAACGTCCAGCTTAAGATAGGAAG...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAAAAGTCATGCATCCCTTaGCGAAACATGCCGTATTTT +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEKSCIP*RNMPYF
Trigger: AAAATACGGCATGTTTCGCCAAGGGATGCATGACTT...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTTTATTCAGCTTCATTaGTGGAGGAAGAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLFIQLH*WRKRLW
Trigger: CCAAAGCCTCTTCCTCCACCAATGAAGCTGAATAAA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGCAGCAAAAAGAGCATaGACACTCTCATCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLAAKRA*TLSSIR
Trigger: TCTGATTGATGAGAGTGTCCATGCTCTTTTTGCTGC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATTAATAAAGAAAGGATaGCTACTCCATAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKALIKKG*LLHRQT
Trigger: GGTCTGCCTATGGAGTAGCCATCCTTTCTTTATTAA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACAGCTTGTCCATGAGTaGAATGATTTGAAGAATAAG +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKAQLVHE*NDLKNK
Trigger: CTTATTCTTCAAATCATTTCACTCATGGACAAGCTG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACTACCATTATCTCAGTaGAAAATGAAAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKALPLSQ*KMKAGR
Trigger: TCTTCCAGCTTTCATTTTTCACTGAGATAATGGTAG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAACCACATTTTCAAACCTaGCAGATTTCCAGACATAAG +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEPHFQT*QISRHK
Trigger: CTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGG...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR TCA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAAACAAAAATTCTGTGTTaGAGCATGAAGCCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGETKILC*SMKPSQ
Trigger: TTGGCTAGGCTTCATGCTTCAACACAGAATTTTTGT...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR GCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGACTGCCTTCATTAGATaGACCAACCGATCTACAAAT +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLTAFIR*TNRSTN
Trigger: ATTTGTAGATCGGTTGGTGCATCTAATGAAGGCAGT...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR GCA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAACTGACTGGATAAACTaGATGAAGCCATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GKGHKINDIRISPDSHKATDWIN*MKPCFV
Trigger: TACAAAACATGGCTTCATGCAGTTTATCCAGTCAGT...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR TCA 90 bp TTAGTACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTCAGCTTGTCCATGAGTaGAATGATTTGAAGAATAAG +
Preference number: 4 (lower is better)
Translates to: LVHRFRGKNHGHIQCMSTQLVHE*NDLKNK
Trigger: CTTATTCTTCAAATCATTTCACTCATGGACAAGCTG...AGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
3UTR CAA 72 bp CTATACAGTAAGAGACTAAGCTACTTGTATCCATTATaGGCTTTCCATAAAAAGAGGCATTTTCCAGTACAG +
Preference number: 4 (lower is better)
Translates to: LYSKRLSYLYPL*AFHKKRHFPVQ
Trigger: CTGTACTGGAAAATGCCTCTTTTTATGGAAAGCCAATAATGGATACAAGTAGCTTAGTCTCTTACTGTATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTGTAAGTTGCTTGGTTaGTGGATAACTCACAATAAT +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLCKLLG*WITHNN
Trigger: ATTATTGTGAGTTATCCACCAACCAAGCAACTTACA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTTCAAGTGCAATATCTaGAATGTTTGCATCAACCAT +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLFKCNI*NVCINH
Trigger: ATGGTTGATGCAAACATTCCAGATATTGCACTTGAA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CCA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTTTCACAGTTTTATCTaGTTCAAGTGCAATATCTGG +
Preference number: 4 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLFHSFI*FKCNIW
Trigger: CCAGATATTGCACTTGAACCAGATAAAACTGTGAAA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCGGGATACCAGGGTGGTAGGGCCTCTCTTTCCCCACGTATTCTCAGTGCTGCTTATGGTGAGGGCCACTaGGGCATTCCTGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PGYQGGRASLSPRILSAAYGEGH*GIPGQV
Trigger: GACCTGCCCAGGAATGCCCAAGTGGCCCTCACCATA...AGCAGCACTGAGAATACGTGGGGAAAGAGAGGCCCTACCACCCTGGTATCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS GCA 90 bp CTGAGCCTGGGAAGTCAAGACTGCAGTGAACCATGGTCATGCCACTaGACTCCAACCTGGGCGACAGTGACAACCTTCGCAGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: LSLGSQDCSEPWSCH*TPTWATVTTFAGGG
Trigger: TCCTCCACCTGCGAAGGTTGTCACTGTCGCCCAGGTTGGAGTGCAGTGGCATGACCATGGTTCACTGCAGTCTTGACTTCCCAGGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587261.5
CDS CCA 90 bp CGGCCTGTCGCAACCGGGCAACAGCATAACGCCTCACAGTTGGGTTaGTGTAATGAGAGGATAACAGCTCCAAGGAGTCCTCTACATCCA +
Preference number: 5 (lower is better)
Translates to: RPVATGQQHNASQLG*CNERITAPRSPLHP
Trigger: TGGATGTAGAGGACTCCTTGGAGCTGTTATCCTCTCATTACACCAACCCAACTGTGAGGCGTTATGCTGTTGCCCGGTTGCGACAGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATATGGTGAGGGCCACTaGGGCATTCCTGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTRYGEGH*GIPGQV
Trigger: GACCTGCCCAGGAATGCCCAAGTGGCCCTCACCATA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CTTAGCCGGGATACCAGGGTGGTAGGGCCTCTCTTTCCCCACGTATTCTCAGTGCTGAGAGAGTGCTACTaGTTCTGCCAGGAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: LSRDTRVVGPLFPHVFSVLRECY*FCQEFL
Trigger: CAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAG...CACTGAGAATACGTGGGGAAAGAGAGGCCCTACCACCCTGGTATCCCGGCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAGGCCCACCTGCAGATaGATTTGGCTGCTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLRPTCR*IWLLRS
Trigger: ACTCCTGAGCAGCCAAATCAATCTGCAGGTGGGCCT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTAGGCCCACCTGCAGATaGATTTGGCTGCTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPRPTCR*IWLLRS
Trigger: ACTCCTGAGCAGCCAAATCAATCTGCAGGTGGGCCT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTGGAGTTTCACCATGTaGCCCGGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLWSFTM*PGLVSN
Trigger: GTTTGAGACCAGCCCGGGCAACATGGTGAAACTCCA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS GCA 90 bp GCCGTATTTTCCAAAGAGCGAAACCGTTGTTCCTCCTACAGGCACTaGTTTTCCGGGACCATACACATCCCATATGGTGAGGGCCACTTG +
Preference number: 5 (lower is better)
Translates to: AVFSKERNRCSSYRH*FSGTIHIPYGEGHL
Trigger: CAAGTGGCCCTCACCATATGGGATGTGTATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGAACAACGGTTTCGCTCTTTGGAAAATACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS CCA 90 bp CTGTCACGCTGTCTTGCCTGGAACAGACGCAGCATCACTTCTGCTTaGCAAGACGGCTCATCTGATCTTCTGAGAGAGTGCTACTTGTTC +
Preference number: 5 (lower is better)
Translates to: LSRCLAWNRRSITSA*QDGSSDLLRECYLF
Trigger: GAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCAGAAGTGATGCTGCGTCTGTTCCAGGCAAGACAGCGTGACAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTATGGTGAGGGCCACTaGGGCATTCCTGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDYGEGH*GIPGQV
Trigger: GACCTGCCCAGGAATGCCCAAGTGGCCCTCACCATA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTCTCTCGTGGCAGCATaGGGTTTCAGATCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLSLVAA*GFRSWS
Trigger: TGACCACGATCTGAAACCCAATGCTGCCACGAGAGA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCGTGGAGGAAGAGGCTTaGGATCCCGACCCAAAATAT +
Preference number: 5 (lower is better)
Translates to: ATVYPPERCSFLTQHASTVEEEA*DPDPKY
Trigger: ATATTTTGGGTCGGGATCCAAAGCCTCTTCCTCCAC...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTCATAACGCCTCACAGTaGGGTTGGTGTAATGAGAGG +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLHNASQ*GWCNER
Trigger: CCTCTCATTACACCAACCCAACTGTGAGGCGTTATG...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS TCA 90 bp CTGGAACAGACGCAGCATCACTTCTGCTTGGCAAGACGGCTCATCTaGTCTTCTGAGAGAGTGCTACTTGTTCTGCCAGGAGTTTTTGTG +
Preference number: 5 (lower is better)
Translates to: LEQTQHHFCLARRLI*SSERVLLVLPGVFV
Trigger: CACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCAGAAGTGATGCTGCGTCTGTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CAA 90 bp CTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACTCCAACAGAATCAAAGAGCGAAACCGTaGTTCCTCCTACAGGCACTG +
Preference number: 5 (lower is better)
Translates to: LSAAPSPSGFSTWSLQQNQRAKP*FLLQAL
Trigger: CAGTGCCTGTAGGAGGAACAACGGTTTCGCTCTTTG...ATTCTGTTGGAGTGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTTCTGCCAGGAGTTTTaGTGGGTTCTGATCCATCTG +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPFCQEF*WVLIHL
Trigger: CAGATGGATCAGAACCCACAAAAACTCCTGGCAGAA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCTGTTTACGGAACTCTaGGTACTGCTCACTCTGTGT +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLFTEL*VLLTLC
Trigger: ACACAGAGTGAGCAGTACCAAGAGTTCCGTAAACAG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGCTCAGGAGTGGGGATaGGGAATGTGCACATTTAAT +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPAQEWG*GMCTFN
Trigger: ATTAAATGTGCACATTCCCAATCCCCACTCCTGAGC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS GCA 90 bp TTAATGTTCCTAACATGTGAAGAAACCAAAGCTGTCACGCTGTCTTaGCTGGAACAGACGCAGCATCACTTCTGCTTGGCAAGACGGCTC +
Preference number: 5 (lower is better)
Translates to: LMFLTCEETKAVTLS*LEQTQHHFCLARRL
Trigger: GAGCCGTCTTGCCAAGCAGAAGTGATGCTGCGTCTGTTCCAGGCAAGACAGCGTGACAGCTTTGGTTTCTTCACATGTTAGGAACATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCAAAGAGCGAAACCGTaGTTCCTCCTACAGGCACTG +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFQRAKP*FLLQAL
Trigger: CAGTGCCTGTAGGAGGAACAACGGTTTCGCTCTTTG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TCCCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCACAAGTCATGCATCCCTaGGCGAAACATGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: SPRILSAAPSPSGFSTWSQVMHP*AKHAVF
Trigger: AAATACGGCATGTTTCGCCAAGGGATGCATGACTTG...TGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CAA 90 bp TCCCCACGTATTCTCAGTGCTGCTCCCTCTCCAAGTGGTTTTTCAACTTGGTCATTCTGCCAGGAGTTTTaGTGGGTTCTGATCCATCTG +
Preference number: 5 (lower is better)
Translates to: SPRILSAAPSPSGFSTWSFCQEF*WVLIHL
Trigger: CAGATGGATCAGAACCCACAAAAACTCCTGGCAGAA...TGACCAAGTTGAAAAACCACTTGGAGAGGGAGCAGCACTGAGAATACGTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTGCAAGCTTGTGGTGTTaGCTCTCAACTAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLASLWC*LSTKFS
Trigger: GGAGAATTTAGTTGAGAGCAAACACCACAAGCTTGC...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTCTCTCGTGGCAGCATaGGGTTTCAGATCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDSLVAA*GFRSWS
Trigger: TGACCACGATCTGAAACCCAATGCTGCCACGAGAGA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGGTGGAGGAAGAGGCTTaGGATCCCGACCCAAAATAT +
Preference number: 5 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLVEEEA*DPDPKY
Trigger: ATATTTTGGGTCGGGATCCAAAGCCTCTTCCTCCAC...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCTTTATTCAGCTTCATaGGTGGAGGAAGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPLYSAS*VEEEAL
Trigger: CAAAGCCTCTTCCTCCACCAATGAAGCTGAATAAAG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTATTGAGCCAAGCATCTaGATGGGTCAATCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLIEPSI*MGQSQF
Trigger: AAACTGGGATTGACCCATCAAGATGCTTGGCTCAAT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAAGATACCTGGTTGGGTaGGATGACCAGCGTAACAGA +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTRRYLVG*DDQRNR
Trigger: TCTGTTACGCTGGTCATCCAACCCAACCAGGTATCT...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGAAGCTCCAAATCATTaGCTAACAAAGAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPEAPNH*LTKSSL
Trigger: CAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS GCA 90 bp ACTATAGATGTAGTGAAACTTCTCTGCTTCCCCCATCGCACCGTCTaGAAAGGTACCACCTACAGCGGGAACTTAGGTACAGGAAAAACA +
Preference number: 5 (lower is better)
Translates to: TIDVVKLLCFPHRTV*KGTTYSGNLGTGKT
Trigger: TGTTTTTCCTGTACCTAAGTTCCCGCTGTAGGTGGTACCTTTGCAGACGGTGCGATGGGGGAAGCAGAGAAGTTTCACTACATCTATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000639914.1
CDS GCA 90 bp ATCACTTCTGCTTGGCAAGACGGCTCATCTGATCTTCTGAGAGAGTaGTACTTGTTCTGCCAGGAGTTTTTGTGGGTTCTGATCCATCTG +
Preference number: 5 (lower is better)
Translates to: ITSAWQDGSSDLLRE*YLFCQEFLWVLIHL
Trigger: CAGATGGATCAGAACCCACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCAGAAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS CCA 90 bp AGATCGTGGTCAGAAGGTCCACTTCTTAAACTCCGGGCAAGCTTGTaGTGTTTGCTCTCAACTAAATTCTCCATAGACATCTGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: RSWSEGPLLKLRASL*CLLSTKFSIDIWGS
Trigger: TGACCCCCAGATGTCTATGGAGAATTTAGTTGAGAGCAAACACCACAAGCTTGCCCGGAGTTTAAGAAGTGGACCTTCTGACCACGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTATCTTAAGCTGGACGTaGATATCCAGGTCACAACTA +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPILSWT*ISRSQL
Trigger: TAGTTGTGACCTGGATATCAACGTCCAGCTTAAGAT...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTATCTTAAGCTGGACGTaGATATCCAGGTCACAACTA +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLILSWT*ISRSQL
Trigger: TAGTTGTGACCTGGATATCAACGTCCAGCTTAAGAT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTCATCTGGAACTTCTTTaGTTTTTGATGCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPHLELL*FLMQEE
Trigger: CTCCTCCTGCATCAAAAACAAAAGAAGTTCCAGATG...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCTCTTTCCGTAACAGCTaGTCCATGAGTGAAATGATT +
Preference number: 5 (lower is better)
Translates to: ATVYPPERCSFLTQHASTSFRNS*SMSEMI
Trigger: AATCATTTCACTCATGGACAAGCTGTTACGGAAAGA...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGACTGTTTACGGAACTCTaGGTACTGCTCACTCTGTGT +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTRLFTEL*VLLTLC
Trigger: ACACAGAGTGAGCAGTACCAAGAGTTCCGTAAACAG...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGCTCAGGAGTGGGGATaGGGAATGTGCACATTTAAT +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTRAQEWG*GMCTFN
Trigger: ATTAAATGTGCACATTCCCAATCCCCACTCCTGAGC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTACAAGAGATACCTGGTaGGGTTGGATGACCAGCGTA +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFTRDTW*GWMTSV
Trigger: TACGCTGGTCATCCAACCCAACCAGGTATCTCTTGT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGGAGCAGCCTGTAAAGTaGAGCTGCAGACATAGACAA +
Preference number: 5 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLEQPVK*SCRHRQ
Trigger: TTGTCTATGTCTGCAGCTCAACTTTACAGGCTGCTC...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS GCA 90 bp GGTTCTGATCCATCTGCTTCTACATTAGGCCAGACTTTCAAGTCATaGATCCCTTGGCGAAACATGCCGTATTTTCCAAAGAGCGAAACC +
Preference number: 5 (lower is better)
Translates to: GSDPSASTLGQTFKS*IPWRNMPYFPKSET
Trigger: GGTTTCGCTCTTTGGAAAATACGGCATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTGGCCTAATGTAGAAGCAGATGGATCAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCAAGTCATGCATCCCTaGGCGAAACATGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDQVMHP*AKHAVF
Trigger: AAATACGGCATGTTTCGCCAAGGGATGCATGACTTG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCTGAGAGAGTGCTACTaGTTCTGCCAGGAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLRECY*FCQEFL
Trigger: CAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCTTCTTCATATGTAAGTaGCTTGGTTGGTGGATAACT +
Preference number: 5 (lower is better)
Translates to: ATVYPPERCSFLTQHASTFFICK*LGWWIT
Trigger: AGTTATCCACCAACCAAGCAACTTACATATGAAGAA...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGGGGCTGGTTATAATTaGGGAGCTATCTATTTCTGC +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTRGAGYN*GAIYFC
Trigger: GCAGAAATAGATAGCTCCCAAATTATAACCAGCCCC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGCCAGTGTTGAGTTTTaGCAGGCTCTCGATATCAAG +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDASVEF*QALDIK
Trigger: CTTGATATCGAGAGCCTGCAAAAACTCAACACTGGC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTCTCTGCTGAGTATCTaGATCTTCACATTCCACTAT +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLSLLSI*IFTFHY
Trigger: ATAGTGGAATGTGAAGATCAAGATACTCAGCAGAGA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTTCTCTGCTGAGTATCTaGATCTTCACATTCCACTAT +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPSLLSI*IFTFHY
Trigger: ATAGTGGAATGTGAAGATCAAGATACTCAGCAGAGA...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTCTTTCCGTAACAGCTaGTCCATGAGTGAAATGATT +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLSFRNS*SMSEMI
Trigger: AATCATTTCACTCATGGACAAGCTGTTACGGAAAGA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCTCTATGTGGAAGAGTTaGCCTGTTTTTGTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: ATVYPPERCSFLTQHASTSMWKS*PVFVSK
Trigger: TTTGCTAACAAAAACAGGCAAACTCTTCCACATAGA...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGATTGAGCCAAGCATCTaGATGGGTCAATCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLIEPSI*MGQSQF
Trigger: AAACTGGGATTGACCCATCAAGATGCTTGGCTCAAT...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTTCCAATATACAAAGGTaGCTCCTAACGTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLSNIQR*LLTWFS
Trigger: AGAAAACCACGTTAGGAGCAACCTTTGTATATTGGA...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCGTTAGCAGAGTTAAGTaGATGCTATTGGGATCATAT +
Preference number: 5 (lower is better)
Translates to: ATVYPPERCSFLTQHASTVSRVK*MLLGSY
Trigger: ATATGATCCCAATAGCATCAACTTAACTCTGCTAAC...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GCTACTGTTTACCCTCCTGAGAGATGCTCCTTCCTCACCCAACACGCATCAACCGTTACTCTACCCATTTaGAGCTTATTTCCATTTCTC +
Preference number: 5 (lower is better)
Translates to: ATVYPPERCSFLTQHASTVTLPI*SLFPFL
Trigger: GAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAAC...GGTTGATGCGTGTTGGGTGAGGAAGGAGCATCTCTCAGGAGGGTAAACAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGAGCAGCCTGTAAAGTaGAGCTGCAGACATAGACAA +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDEQPVK*SCRHRQ
Trigger: TTGTCTATGTCTGCAGCTCAACTTTACAGGCTGCTC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGAGAAGCTCCAAATCATTaGCTAACAAAGAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTREAPNH*LTKSSL
Trigger: CAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTC...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAATATGGTGAGGGCCACTaGGGCATTCCTGGGCAGGTC +
Preference number: 5 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEYGEGH*GIPGQV
Trigger: GACCTGCCCAGGAATGCCCAAGTGGCCCTCACCATA...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCACAAAGAGCGAAACCGTaGTTCCTCCTACAGGCACTG +
Preference number: 5 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSQRAKP*FLLQAL
Trigger: CAGTGCCTGTAGGAGGAACAACGGTTTCGCTCTTTG...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATGAAGGTACAGAGATCTaGTTCCAGATTTTCGCCATC +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDEGTEI*FQIFAI
Trigger: GATGGCGAAAATCTGGAACAAGATCTCTGTACCTTC...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTGAAGGTACAGAGATCTaGTTCCAGATTTTCGCCATC +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFEGTEI*FQIFAI
Trigger: GATGGCGAAAATCTGGAACAAGATCTCTGTACCTTC...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTACATCTCATGGGTCTTaGGATCTCTCTGCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFTSHGS*DLSAEY
Trigger: ATACTCAGCAGAGAGATCCAAAGACCCATGAGATGT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATATCTACAAATGTCTGTaGTGCAGCCAGCAAAGAACG +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDIYKCL*CSQQRT
Trigger: CGTTCTTTGCTGGCTGCACAACAGACATTTGTAGAT...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTATCTACAAATGTCTGTaGTGCAGCCAGCAAAGAACG +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFIYKCL*CSQQRT
Trigger: CGTTCTTTGCTGGCTGCACAACAGACATTTGTAGAT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACTCTAGTTCTTACAGTGGAGTCTGGTTCCTGTGGTCTAGTGCAGCCACTTAATATAACTGGATATTaGCCTCCATCTTCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: PTLVLTVESGSCGLVQPLNITGY*PPSSVL
Trigger: TAAGACGGAAGATGGAGGCAAATATCCAGTTATATT...AAGTGGCTGCACTAGACCACAGGAACCAGACTCCACTGTAAGAACTAGAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATCTTTATTCAGCTTCATaGGTGGAGGAAGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDLYSAS*VEEEAL
Trigger: CAAAGCCTCTTCCTCCACCAATGAAGCTGAATAAAG...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ACCCAATCAACTGGAAAGCCCATTTGCATAAGATTAGGGTGGGGCGACCAGCCTGAAATATCACTGAACTaGTCACCAAAGAAGTCACAT +
Preference number: 5 (lower is better)
Translates to: TQSTGKPICIRLGWGDQPEISLN*SPKKSH
Trigger: ATGTGACTTCTTTGGTGACAAGTTCAGTGATATTTC...AGGCTGGTCGCCCCACCCTAATCTTATGCAAATGGGCTTTCCAGTTGATTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATCCTTATCATCACACTaGACACATCGAAATTCAACC +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTRSLSSH*THRNST
Trigger: GGTTGAATTTCGATGTGTCAAGTGTGATGATAAGGA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAAACTCCGGGCAAGCTaGTGGTGTTTGCTCTCAACT +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEKLRAS*WCLLST
Trigger: AGTTGAGAGCAAACACCACAAGCTTGCCCGGAGTTT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCCCAGGGCTAAGAATTaGAGACAAATAACACGTTAT +
Preference number: 5 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLPRAKN*RQITRY
Trigger: ATAACGTGTTATTTGTCTCAAATTCTTAGCCCTGGG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCTACTGAGTGTGCCTTaGGTAATCCTGTTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFLLSVP*VILLKA
Trigger: TGCTTTTAACAGGATTACCAAAGGCACACTCAGTAG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAAGATACCTGGTTGGGTaGGATGACCAGCGTAACAGA +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSERYLVG*DDQRNR
Trigger: TCTGTTACGCTGGTCATCCAACCCAACCAGGTATCT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAACAAGAGATACCTGGTaGGGTTGGATGACCAGCGTA +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSETRDTW*GWMTSV
Trigger: TACGCTGGTCATCCAACCCAACCAGGTATCTCTTGT...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS TCA 90 bp ACAAAGGTTGCTCCTAACGTGGTTTTCTTATTGAGCCAAGCATCTTaGTGGGTCAATCCCAGTTTCATTTTCTCCAGTACTGGGCAAACT +
Preference number: 5 (lower is better)
Translates to: TKVAPNVVFLLSQAS*WVNPSFIFSSTGQT
Trigger: AGTTTGCCCAGTACTGGAGAAAATGAAACTGGGATTGACCCATCAAGATGCTTGGCTCAATAAGAAAACCACGTTAGGAGCAACCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000587328.2
ENST00000588156.5
ENST00000593098.5
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAACAAGTCATGCATCCCTaGGCGAAACATGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEQVMHP*AKHAVF
Trigger: AAATACGGCATGTTTCGCCAAGGGATGCATGACTTG...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCACAAGTCATGCATCCCTaGGCGAAACATGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSQVMHP*AKHAVF
Trigger: AAATACGGCATGTTTCGCCAAGGGATGCATGACTTG...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCATTCTGCCAGGAGTTTTaGTGGGTTCTGATCCATCTG +
Preference number: 5 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSFCQEF*WVLIHL
Trigger: CAGATGGATCAGAACCCACAAAAACTCCTGGCAGAA...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGAGAGTTTGCCTGTTTTaGTTAGCAAAAGGTTATCCA +
Preference number: 5 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLRVCLF*LAKGYP
Trigger: TGGATAACCTTTTGCTAACAAAAACAGGCAAACTCT...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATAGACAAGCTGGCAGCTTGCATGGGTGAATGCCAGCAGAAACTAAGGACTAGATCTATGTGGAAGAGTTaGCCTGTTTTTGTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: IDKLAACMGECQQKLRTRSMWKS*PVFVSK
Trigger: TTTGCTAACAAAAACAGGCAAACTCTTCCACATAGA...TCTAGTCCTTAGTTTCTGCTGGCATTCACCCATGCAAGCTGCCAGCTTGTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGCAATATCTGGAATGTTaGCATCAACCATCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLQYLEC*HQPSRK
Trigger: TTTCCTTGATGGTTGATGCAAACATTCCAGATATTG...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTCCCAGGGCTAAGAATTaGAGACAAATAACACGTTAT +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFPRAKN*RQITRY
Trigger: ATAACGTGTTATTTGTCTCAAATTCTTAGCCCTGGG...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTCATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGGTTACTCTACCCATTTaGAGCTTATTTCCATTTCTC +
Preference number: 5 (lower is better)
Translates to: FIPVLVLVGFGWLLYHRLVTLPI*SLFPFL
Trigger: GAGAAATGGAAATAAGCTCAAAATGGGTAGAGTAAC...CAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATCCAAGAGAGGGTTCTaGGATCTCCTGCAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSESKRGF*DLLQKN
Trigger: ATTCTTCTGCAGGAGATCCAAGAACCCTCTCTTGGA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS GCA 90 bp TTTTTCTTACGATTTCCACTTTCGCGTTGTACTGCCTTCATTAGATaGACCAACCGATCTACAAATGTCTGTTGTGCAGCCAGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: FFLRFPLSRCTAFIR*TNRSTNVCCAASKE
Trigger: TTCTTTGCTGGCTGCACAACAGACATTTGTAGATCGGTTGGTGCATCTAATGAAGGCAGTACAACGCGAAAGTGGAAATCGTAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000590013.2
ENST00000593098.5
ENST00000639914.1
CDS CCA 90 bp ATTCCAGTTCCATCTTGTACTAAATGCTTTGTAGGATGTTCTCACTaGCAAGGCCAAAGGCTTCCCTTCTGCAAAAACTTGACAAGTAAC +
Preference number: 5 (lower is better)
Translates to: IPVPSCTKCFVGCSH*QGQRLPFCKNLTSN
Trigger: GTTACTTGTCAAGTTTTTGCAGAAGGGAAGCCTTTGGCCTTGCCAGTGAGAACATCCTACAAAGCATTTAGTACAAGATGGAACTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262039.9
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAGCAAGCTTGTGGTGTTaGCTCTCAACTAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEASLWC*LSTKFS
Trigger: GGAGAATTTAGTTGAGAGCAAACACCACAAGCTTGC...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCAGTCCCTACTCAAGATGGAGTTGCTCTAGTTCAAATGTCTCTGACAGTGATTTCTTCATATGTAAGTaGCTTGGTTGGTGGATAACT +
Preference number: 5 (lower is better)
Translates to: PSPYSRWSCSSSNVSDSDFFICK*LGWWIT
Trigger: AGTTATCCACCAACCAAGCAACTTACATATGAAGAA...ATCACTGTCAGAGACATTTGAACTAGAGCAACTCCATCTTGAGTAGGGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAGGGGCTGGTTATAATTaGGGAGCTATCTATTTCTGC +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEGAGYN*GAIYFC
Trigger: GCAGAAATAGATAGCTCCCAAATTATAACCAGCCCC...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATTCCCGTCTTGGTTTTGGTGGGTTTTGGCTGGCTTCTTTACCACAGACTGTTTAATATAACTGGATATTaGCCTCCATCTTCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: IPVLVLVGFGWLLYHRLFNITGY*PPSSVL
Trigger: TAAGACGGAAGATGGAGGCAAATATCCAGTTATATT...AAACAGTCTGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAATTCCCGTCTTGGTTTaGGTGGGTTTTGGCTGGCTT +
Preference number: 5 (lower is better)
Translates to: GKGHKINDIRISPDSHKAIPVLV*VGFGWL
Trigger: AAGCCAGCCAAAACCCACCAAAACCAAGACGGGAAT...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTAAACAACAAAGGCTCTaGTCTGAGGCAGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: HRFRGKNHGHIQCMSTGSKQQRL*SEAGVV
Trigger: AACCACTCCTGCCTCAGACAAGAGCCTTTGTTGTTT...ACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CAA 90 bp GTTCAGGTTTCATTCAAATTGTTTAGGCAACATATATTGTTTGCTTCAAGTGGGCTGCTCTCATGGAACTaGCATCCTGAAGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VQVSFKLFRQHILFASSGLLSWN*HPEGEK
Trigger: CTTCTCCCCTTCAGGATGCAAGTTCCATGAGAGCAG...CCCACTTGAAGCAAACAATATATGTTGCCTAAACAATTTGAATGAAACCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CAA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAAAGTGGGTGGTCATCTaGAAAATATCACCAACGCTC +
Preference number: 5 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSKWVVI*KISPTL
Trigger: GAGCGTTGGTGATATTTTCAAGATGACCACCCACTT...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS TCA 90 bp GAAGTCTCCAATATACAAAGGTTGCTCCTAACGTGGTTTTCTTATTaGGCCAAGCATCTTGATGGGTCAATCCCAGTTTCATTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: EVSNIQRLLLTWFSY*AKHLDGSIPVSFSP
Trigger: TGGAGAAAATGAAACTGGGATTGACCCATCAAGATGCTTGGCTCAATAAGAAAACCACGTTAGGAGCAACCTTTGTATATTGGAGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000587328.2
ENST00000588156.5
ENST00000593098.5
CDS-3UTR CAA 90 bp ATATCACCAACGCTCCACATTTTCAAACCTGACAGATTTCCAGACATAAGGTCAATCTTAAGCTGGACGTaGATATCCAGGTCACAACTA +
Preference number: 5 (lower is better)
Translates to: ISPTLHIFKPDRFPDIRSILSWT*ISRSQL
Trigger: TAGTTGTGACCTGGATATCAACGTCCAGCTTAAGAT...TGACCTTATGTCTGGAAATCTGTCAGGTTTGAAAATGTGGAGCGTTGGTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCATTCTGCCAGGAGTTTTaGTGGGTTCTGATCCATCTG +
Preference number: 5 (lower is better)
Translates to: GKGHKINDIRISPDSHKAFCQEF*WVLIHL
Trigger: CAGATGGATCAGAACCCACAAAAACTCCTGGCAGAA...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACTGAGAGAGTGCTACTaGTTCTGCCAGGAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GKGHKINDIRISPDSHKALRECY*FCQEFL
Trigger: CAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGCATAACGCCTCACAGTaGGGTTGGTGTAATGAGAGG +
Preference number: 5 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLHNASQ*GWCNER
Trigger: CCTCTCATTACACCAACCCAACTGTGAGGCGTTATG...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAACTGAGAGAGTGCTACTaGTTCTGCCAGGAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGELRECY*FCQEFL
Trigger: CAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAG...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAATCCTTATCATCACACTaGACACATCGAAATTCAACC +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSESLSSH*THRNST
Trigger: GGTTGAATTTCGATGTGTCAAGTGTGATGATAAGGA...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGCCAGTGTTGAGTTTTaGCAGGCTCTCGATATCAAG +
Preference number: 5 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLASVEF*QALDIK
Trigger: CTTGATATCGAGAGCCTGCAAAAACTCAACACTGGC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAACATCTCATGGGTCTTaGGATCTCTCTGCTGAGTAT +
Preference number: 5 (lower is better)
Translates to: GKGHKINDIRISPDSHKATSHGS*DLSAEY
Trigger: ATACTCAGCAGAGAGATCCAAAGACCCATGAGATGT...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGTGGTTTTGGTGGGTTTaGGCTGGCTTCTTTACCACA +
Preference number: 5 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLWFWWV*AGFFTT
Trigger: TGTGGTAAAGAAGCCAGCCAAAACCCACCAAAACCA...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp CATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTGGCAACATATATTGTTaGCTTCAAGTGGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: HRFRGKNHGHIQCMSTGSGNIYC*LQVGSK
Trigger: CTTTGACCCCACTTGAAGCAAACAATATATGTTGCC...ACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CAA 90 bp TTGGAGTTGAGGAGTAGACAAGATTTGCTAATAGGTTCAGTATATGAGATGAGGTCTTTCCGTAACAGCTaGTCCATGAGTGAAATGATT +
Preference number: 5 (lower is better)
Translates to: LELRSRQDLLIGSVYEMRSFRNS*SMSEMI
Trigger: AATCATTTCACTCATGGACAAGCTGTTACGGAAAGA...CCTCATCTCATATACTGAACCTATTAGCAAATCTTGTCTACTCCTCAACTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CAA 90 bp ATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTCTCTTTCCGTAACAGCTaGTCCATGAGTGAAATGATT +
Preference number: 5 (lower is better)
Translates to: IDSGVKTMGIYNVCLLVVSFRNS*SMSEMI
Trigger: AATCATTTCACTCATGGACAAGCTGTTACGGAAAGA...GACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS-3UTR CAA 90 bp CCCACAAATGCACACATTAGAGGTCAGTACTATCACTACCATTATCTCAGTGAAGAAATATCACTGAACTaGTCACCAAAGAAGTCACAT +
Preference number: 5 (lower is better)
Translates to: PTNAHIRGQYYHYHYLSEEISLN*SPKKSH
Trigger: ATGTGACTTCTTTGGTGACAAGTTCAGTGATATTTC...TTCACTGAGATAATGGTAGTGATAGTACTGACCTCTAATGTGTGCATTTGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAAGGCCGCAACTTATCTaGTTAGTACATAGATTCAGG +
Preference number: 5 (lower is better)
Translates to: YIDSGVKTMGIYNVCLLVRPQLI*LVHRFR
Trigger: CCTGAATCTATGTACTAACAAGATAAGTTGCGGCCT...TACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CAA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAAACATCAGTCAGAGCTTaGCACCTGTTCCAAATGACT +
Preference number: 5 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGETSVRA*HLFQMT
Trigger: AGTCATTTGGAACAGGTGCAAAGCTCTGACTGATGT...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp CATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTAGTAATATAACTGGATATTaGCCTCCATCTTCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: HRFRGKNHGHIQCMSTGSNITGY*PPSSVL
Trigger: TAAGACGGAAGATGGAGGCAAATATCCAGTTATATT...ACTACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597477.5
CDS-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGCTACTGAGTGTGCCTTaGGTAATCCTGTTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLLLSVP*VILLKA
Trigger: TGCTTTTAACAGGATTACCAAAGGCACACTCAGTAG...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GTACATAGATTCAGGGGTAAAAACCATGGGCATATACAATGTATGTCTACTGGTTTCAACACTGATTTATaGAACACTTTAGCTAGGTGG +
Preference number: 5 (lower is better)
Translates to: VHRFRGKNHGHIQCMSTGFNTDL*NTLARW
Trigger: CCACCTAGCTAAAGTGTTCAATAAATCAGTGTTGAA...ACCAGTAGACATACATTGTATATGCCCATGGTTTTTACCCCTGAATCTATGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589056.5
CDS-3UTR CAA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCAAGAGTTTGCCTGTTTTaGTTAGCAAAAGGTTATCCA +
Preference number: 5 (lower is better)
Translates to: GKGHKINDIRISPDSHKARVCLF*LAKGYP
Trigger: TGGATAACCTTTTGCTAACAAAAACAGGCAAACTCT...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp GGTAAAGGACATAAGATAAATGATATAAGGATTAGTCCTGACAGTCACAAGGCACAATATCTGGAATGTTaGCATCAACCATCAAGGAAA +
Preference number: 5 (lower is better)
Translates to: GKGHKINDIRISPDSHKAQYLEC*HQPSRK
Trigger: TTTCCTTGATGGTTGATGCAAACATTCCAGATATTG...TGCCTTGTGACTGTCAGGACTAATCCTTATATCATTTATCTTATGTCCTTTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGCCCTTCTGCAAAAACTaGACAAGTAACATAAAGATC +
Preference number: 5 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLPFCKN*TSNIKI
Trigger: GATCTTTATGTTACTTGTCAAGTTTTTGCAGAAGGG...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262039.9
CDS-3UTR CAA 90 bp ATACAAGTCTGTAAATTTACTAAACCATCAGACTGTATGCTTTCCAAGGGTGAACCCTTCTGCAAAAACTaGACAAGTAACATAAAGATC +
Preference number: 5 (lower is better)
Translates to: IQVCKFTKPSDCMLSKGEPFCKN*TSNIKI
Trigger: GATCTTTATGTTACTTGTCAAGTTTTTGCAGAAGGG...TTCACCCTTGGAAAGCATACAGTCTGATGGTTTAGTAAATTTACAGACTTGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586545.5
CDS-3UTR CAA 90 bp TTAATGAAAAGAAGCTCCAAATCATTTGCTAACAAAGAGCAGCCTGTAAAGTTGGTTAGCAGAGTTAAGTaGATGCTATTGGGATCATAT +
Preference number: 5 (lower is better)
Translates to: LMKRSSKSFANKEQPVKLVSRVK*MLLGSY
Trigger: ATATGATCCCAATAGCATCAACTTAACTCTGCTAAC...CAACTTTACAGGCTGCTCTTTGTTAGCAAATGATTTGGAGCTTCTTTTCATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000398870.7
CDS TCA 72 bp GCACTGCTTTTCCGGGACCATACACATCCCATATGGTaGGGGCCACTTGGGCATTCCTGGGCAGGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: ALLFRDHTHPIW*GPLGHSWAGQG
Trigger: ACCCTGACCTGCCCAGGAATGCCCAAGTGGCCCTCACCATATGGGATGTGTATGGTCCCGGAAAAGCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS GCA 72 bp GGAAGTCAAGACTGCAGTGAACCATGGTCATGCCACTaGACTCCAACCTGGGCGACAGTGACAACCTTCGCA +
Preference number: 6 (lower is better)
Translates to: GSQDCSEPWSCH*TPTWATVTTFA
Trigger: TGCGAAGGTTGTCACTGTCGCCCAGGTTGGAGTGCAGTGGCATGACCATGGTTCACTGCAGTCTTGACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587261.5
CDS CAA 72 bp CCTGTCGCAACCGGGCAACAGCATAACGCCTCACAGTaGGGTTGGTGTAATGAGAGGATAACAGCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: PVATGQQHNASQ*GWCNERITAPR
Trigger: CCTTGGAGCTGTTATCCTCTCATTACACCAACCCAACTGTGAGGCGTTATGCTGTTGCCCGGTTGCGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS CAA 90 bp CATCATCGGCCTGTCGCAACCGGGCAACAGCATAACGCCTCACAGTaGGGTTGGTGTAATGAGAGGATAACAGCTCCAAGGAGTCCTCTA +
Preference number: 6 (lower is better)
Translates to: HHRPVATGQQHNASQ*GWCNERITAPRSPL
Trigger: TAGAGGACTCCTTGGAGCTGTTATCCTCTCATTACACCAACCCAACTGTGAGGCGTTATGCTGTTGCCCGGTTGCGACAGGCCGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS GCA 72 bp GTAGTGAAACTTCTCTGCTTCCCCCATCGCACCGTCTaGAAAGGTACCACCTACAGCGGGAACTTAGGTACA +
Preference number: 6 (lower is better)
Translates to: VVKLLCFPHRTV*KGTTYSGNLGT
Trigger: TGTACCTAAGTTCCCGCTGTAGGTGGTACCTTTGCAGACGGTGCGATGGGGGAAGCAGAGAAGTTTCACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262039.9
ENST00000639914.1
CDS CCA 72 bp TGTCTTGCCTGGAACAGACGCAGCATCACTTCTGCTTaGCAAGACGGCTCATCTGATCTTCTGAGAGAGTGC +
Preference number: 6 (lower is better)
Translates to: CLAWNRRSITSA*QDGSSDLLREC
Trigger: GCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCAGAAGTGATGCTGCGTCTGTTCCAGGCAAGACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS CAA 90 bp GCATCCCTTGGCGAAACATGCCGTATTTTCCAAAGAGCGAAACCGTaGTTCCTCCTACAGGCACTGCTTTTCCGGGACCATACACATCCC +
Preference number: 6 (lower is better)
Translates to: ASLGETCRIFQRAKP*FLLQALLFRDHTHP
Trigger: GGGATGTGTATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGAACAACGGTTTCGCTCTTTGGAAAATACGGCATGTTTCGCCAAGGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS TCA 72 bp ACGCAGCATCACTTCTGCTTGGCAAGACGGCTCATCTaGTCTTCTGAGAGAGTGCTACTTGTTCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: TQHHFCLARRLI*SSERVLLVLPG
Trigger: TCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCAGAAGTGATGCTGCGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS GCA 72 bp TCCAAAGAGCGAAACCGTTGTTCCTCCTACAGGCACTaGTTTTCCGGGACCATACACATCCCATATGGTGAG +
Preference number: 6 (lower is better)
Translates to: SKERNRCSSYRH*FSGTIHIPYGE
Trigger: CTCACCATATGGGATGTGTATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGAACAACGGTTTCGCTCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS CCA 72 bp CATGTGAAGAAACCAAAGCTGTCACGCTGTCTTGCCTaGAACAGACGCAGCATCACTTCTGCTTGGCAAGAC +
Preference number: 6 (lower is better)
Translates to: HVKKPKLSRCLA*NRRSITSAWQD
Trigger: GTCTTGCCAAGCAGAAGTGATGCTGCGTCTGTTCCAGGCAAGACAGCGTGACAGCTTTGGTTTCTTCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS CAA 72 bp GGCGAAACATGCCGTATTTTCCAAAGAGCGAAACCGTaGTTCCTCCTACAGGCACTGCTTTTCCGGGACCAT +
Preference number: 6 (lower is better)
Translates to: GETCRIFQRAKP*FLLQALLFRDH
Trigger: ATGGTCCCGGAAAAGCAGTGCCTGTAGGAGGAACAACGGTTTCGCTCTTTGGAAAATACGGCATGTTTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS GCA 72 bp GCTTGGCAAGACGGCTCATCTGATCTTCTGAGAGAGTaGTACTTGTTCTGCCAGGAGTTTTTGTGGGTTCTG +
Preference number: 6 (lower is better)
Translates to: AWQDGSSDLLRE*YLFCQEFLWVL
Trigger: CAGAACCCACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS GCA 72 bp CTAACATGTGAAGAAACCAAAGCTGTCACGCTGTCTTaGCTGGAACAGACGCAGCATCACTTCTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LTCEETKAVTLS*LEQTQHHFCLA
Trigger: TGCCAAGCAGAAGTGATGCTGCGTCTGTTCCAGGCAAGACAGCGTGACAGCTTTGGTTTCTTCACATGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS GCA 72 bp CCTTGGCAAGACGGCTCATCTGATCTTCTGAGAGAGTaGTACTTGTTCTGCCAGGAGTTTTTGTGGGTTCTG +
Preference number: 6 (lower is better)
Translates to: PWQDGSSDLLRE*YLFCQEFLWVL
Trigger: CAGAACCCACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585528.5
ENST00000586545.5
CDS CAA 72 bp GGTCCACTTCTTAAACTCCGGGCAAGCTTGTGGTGTTaGCTCTCAACTAAATTCTCCATAGACATCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GPLLKLRASLWC*LSTKFSIDIWG
Trigger: CCCCCAGATGTCTATGGAGAATTTAGTTGAGAGCAAACACCACAAGCTTGCCCGGAGTTTAAGAAGTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS CAA 90 bp TTCAGATCGTGGTCAGAAGGTCCACTTCTTAAACTCCGGGCAAGCTaGTGGTGTTTGCTCTCAACTAAATTCTCCATAGACATCTGGGGG +
Preference number: 6 (lower is better)
Translates to: FRSWSEGPLLKLRAS*WCLLSTKFSIDIWG
Trigger: CCCCCAGATGTCTATGGAGAATTTAGTTGAGAGCAAACACCACAAGCTTGCCCGGAGTTTAAGAAGTGGACCTTCTGACCACGATCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS CAA 90 bp TCTGCTTGGCAAGACGGCTCATCTGATCTTCTGAGAGAGTGCTACTaGTTCTGCCAGGAGTTTTTGTGGGTTCTGATCCATCTGCTTCTA +
Preference number: 6 (lower is better)
Translates to: SAWQDGSSDLLRECY*FCQEFLWVLIHLLL
Trigger: TAGAAGCAGATGGATCAGAACCCACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS CAA 90 bp TTACCTTGGCAAGACGGCTCATCTGATCTTCTGAGAGAGTGCTACTaGTTCTGCCAGGAGTTTTTGTGGGTTCTGATCCATCTGCTTCTA +
Preference number: 6 (lower is better)
Translates to: LPWQDGSSDLLRECY*FCQEFLWVLIHLLL
Trigger: TAGAAGCAGATGGATCAGAACCCACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585528.5
ENST00000586545.5
CDS TCA 72 bp TTTGGTGAGCTTGGCAAGACGGCTCATCTGATCTTCTaGGAGAGTGCTACTTGTTCTGCCAGGAGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: FGELGKTAHLIF*ESATCSARSFC
Trigger: ACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCTCACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000589550.1
ENST00000639914.1
CDS TCA 72 bp TCACTTCTGCTTGGCAAGACGGCTCATCTGATCTTCTaGGAGAGTGCTACTTGTTCTGCCAGGAGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: SLLLGKTAHLIF*ESATCSARSFC
Trigger: ACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTGCCAAGCAGAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591011.1
CDS GCA 72 bp CGATTTCCACTTTCGCGTTGTACTGCCTTCATTAGATaGACCAACCGATCTACAAATGTCTGTTGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: RFPLSRCTAFIR*TNRSTNVCCAA
Trigger: GGCTGCACAACAGACATTTGTAGATCGGTTGGTGCATCTAATGAAGGCAGTACAACGCGAAAGTGGAAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000590013.2
ENST00000593098.5
ENST00000639914.1
CDS GCA 72 bp CCAGTACTGGGCAAACTTGTGAATCTGTTCCACCACTaGAGCAAAAAGAGCATGGACACTCTCATCAATCAG +
Preference number: 6 (lower is better)
Translates to: PVLGKLVNLFHH*SKKSMDTLINQ
Trigger: CTGATTGATGAGAGTGTCCATGCTCTTTTTGCTGCAGTGGTGGAACAGATTCACAAGTTTGCCCAGTACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000587328.2
ENST00000588156.5
ENST00000588631.5
ENST00000593098.5
CDS CAA 72 bp CAAGACGGCTCATCTGATCTTCTGAGAGAGTGCTACTaGTTCTGCCAGGAGTTTTTGTGGGTTCTGATCCAT +
Preference number: 6 (lower is better)
Translates to: QDGSSDLLRECY*FCQEFLWVLIH
Trigger: ATGGATCAGAACCCACAAAAACTCCTGGCAGAACAAGTAGCACTCTCTCAGAAGATCAGATGAGCCGTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS CAA 90 bp GCCATTCAGATGGTCAACTTCATGAGAGCTGAGGGCTTACCTGTCTaGTTCTCCACTATATCTTCAGCACGTCCATGTCTAGCTCATAAT +
Preference number: 6 (lower is better)
Translates to: AIQMVNFMRAEGLPV*FSTISSARPCLAHN
Trigger: ATTATGAGCTAGACATGGACGTGCTGAAGATATAGTGGAGAACAAGACAGGTAAGCCCTCAGCTCTCATGAAGTTGACCATCTGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593098.5
CDS GCA 72 bp CCATCTGCTTCTACATTAGGCCAGACTTTCAAGTCATaGATCCCTTGGCGAAACATGCCGTATTTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: PSASTLGQTFKS*IPWRNMPYFPK
Trigger: CTTTGGAAAATACGGCATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTGGCCTAATGTAGAAGCAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS GCA 72 bp CCATTTCTGGGCAAACTTGTGAATCTGTTCCACCACTaGAGCAAAAAGAGCATGGACACTCTCATCAATCAG +
Preference number: 6 (lower is better)
Translates to: PFLGKLVNLFHH*SKKSMDTLINQ
Trigger: CTGATTGATGAGAGTGTCCATGCTCTTTTTGCTGCAGTGGTGGAACAGATTCACAAGTTTGCCCAGAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639914.1
CDS CCA 72 bp TCTACATTAGGCCAGACTTTCAAGTCATGCATCCCTTaGCGAAACATGCCGTATTTTCCAAAGAGCGAAACC +
Preference number: 6 (lower is better)
Translates to: STLGQTFKSCIP*RNMPYFPKSET
Trigger: GGTTTCGCTCTTTGGAAAATACGGCATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTGGCCTAATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS CCA 72 bp CCCTCTGTATCAAGAACTTCAGCCACAGGAACTGACTaGATAAACTGCATGAAGCCATGTTTTGTACTGGTG +
Preference number: 6 (lower is better)
Translates to: PSVSRTSATGTD*INCMKPCFVLV
Trigger: CACCAGTACAAAACATGGCTTCATGCAGTTTATCCAGTCAGTTCCTGTGGCTGAAGTTCTTGATACAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000587402.2
ENST00000589056.5
ENST00000593098.5
ENST00000597477.5
ENST00000639914.1
CDS CCA 72 bp GTTCAAAATCAGATTAGAATACCTGCAAGTCTGAGGTaGAAGGATCATCTGAGCCTGGGAAGTCAAGACTGC +
Preference number: 6 (lower is better)
Translates to: VQNQIRIPASLR*KDHLSLGSQDC
Trigger: GCAGTCTTGACTTCCCAGGCTCAGATGATCCTTCCACCTCAGACTTGCAGGTATTCTAATCTGATTTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587261.5
CDS CAA 72 bp TGGTCAGAAGGTCCACTTCTTAAACTCCGGGCAAGCTaGTGGTGTTTGCTCTCAACTAAATTCTCCATAGAC +
Preference number: 6 (lower is better)
Translates to: WSEGPLLKLRAS*WCLLSTKFSID
Trigger: GTCTATGGAGAATTTAGTTGAGAGCAAACACCACAAGCTTGCCCGGAGTTTAAGAAGTGGACCTTCTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS CAA 72 bp ATGGTCAACTTCATGAGAGCTGAGGGCTTACCTGTCTaGTTCTCCACTATATCTTCAGCACGTCCATGTCTA +
Preference number: 6 (lower is better)
Translates to: MVNFMRAEGLPV*FSTISSARPCL
Trigger: TAGACATGGACGTGCTGAAGATATAGTGGAGAACAAGACAGGTAAGCCCTCAGCTCTCATGAAGTTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593098.5
CDS TCA 72 bp AGTGCTACTTGTTCTGCCAGGAGTTTTTGTGGGTTCTaGTCCATCTGCTTCTACATTAGGCCAGACTTTCAA +
Preference number: 6 (lower is better)
Translates to: SATCSARSFCGF*SICFYIRPDFQ
Trigger: TTGAAAGTCTGGCCTAATGTAGAAGCAGATGGATCAGAACCCACAAAAACTCCTGGCAGAACAAGTAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS TCA 72 bp GTATTCAGCCATTCAGATGGTCAACTTCATGAGAGCTaGGGGCTTACCTGTCTTGTTCTCCACTATATCTTC +
Preference number: 6 (lower is better)
Translates to: VFSHSDGQLHES*GLTCLVLHYIF
Trigger: GAAGATATAGTGGAGAACAAGACAGGTAAGCCCTCAGCTCTCATGAAGTTGACCATCTGAATGGCTGAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593098.5
CDS TCA 72 bp ATACTCTGTATTCAGCCATTCAGATGGTCAACTTCATaGGAGCTGAGGGCTTACCTGTCTTGTTCTCCACTA +
Preference number: 6 (lower is better)
Translates to: ILCIQPFRWSTS*ELRAYLSCSPL
Trigger: TAGTGGAGAACAAGACAGGTAAGCCCTCAGCTCTCATGAAGTTGACCATCTGAATGGCTGAATACAGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593098.5
CDS CCA 72 bp CCATCTTGTACTAAATGCTTTGTAGGATGTTCTCACTaGCAAGGCCAAAGGCTTCCCTTCTGCAAAAACTTG +
Preference number: 6 (lower is better)
Translates to: PSCTKCFVGCSH*QGQRLPFCKNL
Trigger: CAAGTTTTTGCAGAAGGGAAGCCTTTGGCCTTGCCAGTGAGAACATCCTACAAAGCATTTAGTACAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262039.9
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS CCA 72 bp TCAGAAGGTCCACTTCTTAAACTCCGGGCAAGCTTGTaGTGTTTGCTCTCAACTAAATTCTCCATAGACATC +
Preference number: 6 (lower is better)
Translates to: SEGPLLKLRASL*CLLSTKFSIDI
Trigger: GATGTCTATGGAGAATTTAGTTGAGAGCAAACACCACAAGCTTGCCCGGAGTTTAAGAAGTGGACCTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000639914.1
CDS CAA 72 bp TTCTACATTAGGCCAGACTTTCAAGTCATGCATCCCTaGGCGAAACATGCCGTATTTTCCAAAGAGCGAAAC +
Preference number: 6 (lower is better)
Translates to: FYIRPDFQVMHP*AKHAVFSKERN
Trigger: GTTTCGCTCTTTGGAAAATACGGCATGTTTCGCCAAGGGATGCATGACTTGAAAGTCTGGCCTAATGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS TCA 72 bp GCTCCTAACGTGGTTTTCTTATTGAGCCAAGCATCTTaGTGGGTCAATCCCAGTTTCATTTTCTCCAGTACT +
Preference number: 6 (lower is better)
Translates to: APNVVFLLSQAS*WVNPSFIFSST
Trigger: AGTACTGGAGAAAATGAAACTGGGATTGACCCATCAAGATGCTTGGCTCAATAAGAAAACCACGTTAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000587328.2
ENST00000588156.5
ENST00000593098.5
CDS GCA 72 bp TTTCAGCCATTCATTCCAGTTCCATCTTGTACTAAATaGTTTGTAGGATGTTCTCACTGGCAAGGCCAAAGG +
Preference number: 6 (lower is better)
Translates to: FQPFIPVPSCTK*FVGCSHWQGQR
Trigger: CCTTTGGCCTTGCCAGTGAGAACATCCTACAAAGCATTTAGTACAAGATGGAACTGGAATGAATGGCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262039.9
ENST00000585528.5
ENST00000586545.5
ENST00000589550.1
ENST00000591011.1
ENST00000639914.1
CDS CAA 90 bp CTGCTGAGTATCTTGATCTTCACATTCCACTATCACATACCTGTCTaGTTCTCCACTATATCTTCAGCACGTCCATGTCTAGCTCATAAT +
Preference number: 6 (lower is better)
Translates to: LLSILIFTFHYHIPV*FSTISSARPCLAHN
Trigger: ATTATGAGCTAGACATGGACGTGCTGAAGATATAGTGGAGAACAAGACAGGTATGTGATAGTGGAATGTGAAGATCAAGATACTCAGCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590013.2
CDS TCA 72 bp AATATACAAAGGTTGCTCCTAACGTGGTTTTCTTATTaGGCCAAGCATCTTGATGGGTCAATCCCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: NIQRLLLTWFSY*AKHLDGSIPVS
Trigger: TGAAACTGGGATTGACCCATCAAGATGCTTGGCTCAATAAGAAAACCACGTTAGGAGCAACCTTTGTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000587328.2
ENST00000588156.5
ENST00000593098.5
CDS CAA 72 bp ATCTTGATCTTCACATTCCACTATCACATACCTGTCTaGTTCTCCACTATATCTTCAGCACGTCCATGTCTA +
Preference number: 6 (lower is better)
Translates to: ILIFTFHYHIPV*FSTISSARPCL
Trigger: TAGACATGGACGTGCTGAAGATATAGTGGAGAACAAGACAGGTATGTGATAGTGGAATGTGAAGATCAAGAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590013.2
CDS CAA 72 bp GCACTACCTCAAACTTTCCTTGGCACTCAGTTCAATTaGTGGTCCATGAATCTAAAGCCGAACATTAAAACA +
Preference number: 6 (lower is better)
Translates to: ALPQTFLGTQFN*WSMNLKPNIKT
Trigger: TGTTTTAATGTTCGGCTTTAGATTCATGGACCACAAATTGAACTGAGTGCCAAGGAAAGTTTGAGGTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593098.5
CDS CAA 72 bp ATCTTCTCATTACGTTCAAGTACATCTCATGGGTCTTaGGATCTCTCTGCTGAGTATCTTGATCTTCACATT +
Preference number: 6 (lower is better)
Translates to: IFSLRSSTSHGS*DLSAEYLDLHI
Trigger: AATGTGAAGATCAAGATACTCAGCAGAGAGATCCAAAGACCCATGAGATGTACTTGAACGTAATGAGAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000590013.2
ENST00000593098.5
ENST00000639914.1
CDS CAA 72 bp GTATGTCTACTGGTAGTCATTAATTGTTACCTGTTTTaGTTAGCAAAAGGTTATCCAGGTGCCTGTCTCCAA +
Preference number: 6 (lower is better)
Translates to: VCLLVVINCYLF*LAKGYPGACLQ
Trigger: TTGGAGACAGGCACCTGGATAACCTTTTGCTAACAAAAACAGGTAACAATTAATGACTACCAGTAGACATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5
CDS CCA 72 bp GCGGAATTTATCCTGAACCTTTTTCACAGTTTTATCTaGTTCAAGTGCAATATCTGGAATGTTTGCATCAAC +
Preference number: 6 (lower is better)
Translates to: AEFILNLFHSFI*FKCNIWNVCIN
Trigger: GTTGATGCAAACATTCCAGATATTGCACTTGAACCAGATAAAACTGTGAAAAAGGTTCAGGATAAATTCCGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262039.9
ENST00000398870.7
ENST00000587261.5
ENST00000587328.2
ENST00000588156.5
ENST00000588631.5
ENST00000593098.5
ENST00000639914.1
CDS CAA 90 bp ATATACAATGTATGTCTACTGGTAGTCATTAATTGTTACCTGTTTTaGTTAGCAAAAGGTTATCCAGGTGCCTGTCTCCAACTCCAAGTA +
Preference number: 6 (lower is better)
Translates to: IYNVCLLVVINCYLF*LAKGYPGACLQLQV
Trigger: TACTTGGAGTTGGAGACAGGCACCTGGATAACCTTTTGCTAACAAAAACAGGTAACAATTAATGACTACCAGTAGACATACATTGTATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589056.5
ENST00000597477.5