RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3C2G (Homo sapiens)

Ensembl gene IDs: ENSG00000139144

Ensembl transcript IDs: ENST00000433979.6, ENST00000535651.5, ENST00000536967.2, ENST00000538779.6, ENST00000546003.5, ENST00000675017.1, ENST00000676171.1

Found 520 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAAAACGCTTTGTAGCTGTGCACCCAGGTTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCTGAGGTGGGAAGGAAGCCCGGGATT +
Preference number: 1 (lower is better)
Translates to: RKRFVAVHPGFWNVV*CIHCEAEVGRKPGI
Trigger: AATCCCGGGCTTCCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGGGTGCACAGCTACAAAGCGTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR TCA 90 bp GTTGCTCTTTCAATCGACCTAGTTGTACTCAGCAAACAGGATTCCTaGGGAAAAGTCTGTGAAGTAGATTTGGCAGGGCTTATGGCTGAC +
Preference number: 1 (lower is better)
Translates to: VALSIDLVVLSKQDS*GKVCEVDLAGLMAD
Trigger: GTCAGCCATAAGCCCTGCCAAATCTACTTCACAGACTTTTCCTCAGGAATCCTGTTTGCTGAGTACAACTAGGTCGATTGAAAGAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR TCA 90 bp TTAATTGTATTTTCTTTCAATGGTCCTATCAGTCCAGAATGGCGATaGATCTTTGCTAGGGTCACAGCATCAGGTACCATCTGCACCAAT +
Preference number: 1 (lower is better)
Translates to: LIVFSFNGPISPEWR*IFARVTASGTICTN
Trigger: ATTGGTGCAGATGGTACCTGATGCTGTGACCCTAGCAAAGATTCATCGCCATTCTGGACTGATAGGACCATTGAAAGAAAATACAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR TCA 90 bp TCTGTGTCTTGTGGACGAAGATTATTATACACATATTTCAGGTCTTaGATTCCACTTAGCTCAGGCAGTCCTGCATACAGCATCATTTCC +
Preference number: 1 (lower is better)
Translates to: SVSCGRRLLYTYFRS*IPLSSGSPAYSIIS
Trigger: GGAAATGATGCTGTATGCAGGACTGCCTGAGCTAAGTGGAATTCAAGACCTGAAATATGTGTATAATAATCTTCGTCCACAAGACACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR GCA 90 bp GAGGAAGATGACAAGTATTTACATCTTGAAAGAACTCTTCTAGTCTaGCAATTTCTTTCTTCAGTACCTCCTGTCTTTGATGGTCACTGG +
Preference number: 1 (lower is better)
Translates to: EEDDKYLHLERTLLV*QFLSSVPPVFDGHW
Trigger: CCAGTGACCATCAAAGACAGGAGGTACTGAAGAAAGAAATTGGCAGACTAGAAGAGTTCTTTCAAGATGTAAATACTTGTCATCTTCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR GCA 90 bp TTGAAAACTGCTCAAATGATTTTTCTGTCAGGCTTGTTTCGTTGTTaGTGTGTGTCACCTGGATCAGATACAGATTACTGGATTTCTTGC +
Preference number: 1 (lower is better)
Translates to: LKTAQMIFLSGLFRC*CVSPGSDTDYWISC
Trigger: GCAAGAAATCCAGTAATCTGTATCTGATCCAGGTGACACACAGCAACAACGAAACAAGCCTGACAGAAAAATCATTTGAGCAGTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 90 bp TTTGTAAAAATTCTTCAGAGCCACATACACTTAGAATATGATCTTTaGGGAGTAGCTGGTCATTTGTGCAAAAATGCAGAATTTCTGCAA +
Preference number: 1 (lower is better)
Translates to: FVKILQSHIHLEYDL*GVAGHLCKNAEFLQ
Trigger: TTGCAGAAATTCTGCATTTTTGCACAAATGACCAGCTACTCCCCAAAGATCATATTCTAAGTGTATGTGGCTCTGAAGAATTTTTACAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 90 bp TATTTTCTTGGTAAAATGACTTGTTGCTTCCAGGTCTGTGTCTTGTaGACGAAGATTATTATACACATATTTCAGGTCTTGAATTCCACT +
Preference number: 1 (lower is better)
Translates to: YFLGKMTCCFQVCVL*TKIIIHIFQVLNST
Trigger: AGTGGAATTCAAGACCTGAAATATGTGTATAATAATCTTCGTCCACAAGACACAGACCTGGAAGCAACAAGTCATTTTACCAAGAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CCA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATACTGTGAAGCTGAGGTaGGAAGGAAGCCCGGGATTT +
Preference number: 2 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHTVKLR*EGSPGF
Trigger: AAATCCCGGGCTTCCTTCCCACCTCAGCTTCACAGT...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR GCA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATAGGCCAGACTCGTATTaGTGCTTTGAGGTACTTCCA +
Preference number: 2 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHRPDSY*CFEVLP
Trigger: TGGAAGTACCTCAAAGCAGCAATACGAGTCTGGCCT...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CCA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATACAGGGTCACCGGGGATaGCTGACTTACATCCCACAC +
Preference number: 2 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIQGHRG*LTYIPH
Trigger: GTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTG...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR GCA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATAGCAACCTGGATGCTCTaGAAGGAGCGGTGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIATWML*KERWSR
Trigger: TCTACTCCACCGCTCCTTGCAGAGCATCCAGGTTGC...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR TCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAGTCACCGGGGATGGCTaGCTTACATCCCACACTCCT +
Preference number: 2 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKVTGDG*LTSHTP
Trigger: AGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGAC...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTCTTTGGGGAGTAGCTaGTCATTTGTGCAAAAATGC +
Preference number: 2 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRSLGSS*SFVQKC
Trigger: GCATTTTTGCACAAATGACCAGCTACTCCCCAAAGA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTTAGAATATGATCTTTaGGGAGTAGCTGGTCATTTG +
Preference number: 2 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRLEYDL*GVAGHL
Trigger: CAAATGACCAGCTACTCCCCAAAGATCATATTCTAA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 90 bp TATTTTCTTTCAATGGTCCTATCAGTCCAGAATGGCGATGAATCTTaGCTAGGGTCACAGCATCAGGTACCATCTGCACCAATCCTTGGT +
Preference number: 2 (lower is better)
Translates to: YFLSMVLSVQNGDES*LGSQHQVPSAPILG
Trigger: ACCAAGGATTGGTGCAGATGGTACCTGATGCTGTGACCCTAGCAAAGATTCATCGCCATTCTGGACTGATAGGACCATTGAAAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 90 bp AGGCAGTCCTGCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTaGGCTGTGCTTTCTGATAATATTATAAGCACGACAGCAAAGTTC +
Preference number: 2 (lower is better)
Translates to: RQSCIQHHFQQVQEQ*AVLSDNIISTTAKF
Trigger: GAACTTTGCTGTCGTGCTTATAATATTATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGCAGGACTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 90 bp TTTGGAAACAGTGGAAGACAAGTCCACGCCAGTAAATTTGCATTGTaGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGAT +
Preference number: 2 (lower is better)
Translates to: FGNSGRQVHASKFAL*VAQAIPNSFTVSMD
Trigger: ATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGTGGACTTGTCTTCCACTGTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 90 bp TCTTTTGGAAACAGTGGAAGACAAGTCCACGCCAGTAAATTTGCATaGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATG +
Preference number: 2 (lower is better)
Translates to: SFGNSGRQVHASKFA*LVAQAIPNSFTVSM
Trigger: CATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGTGGACTTGTCTTCCACTGTTTCCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 90 bp CATTTGCATATCCAAGCCTTCCTGCAGCCAAATATTGTCCATCACTaGAATAAGCTGCAGAACAAGCATATCCTGACGAAGATCATCTCC +
Preference number: 2 (lower is better)
Translates to: HLHIQAFLQPNIVHH*NKLQNKHILTKIIS
Trigger: GGAGATGATCTTCGTCAGGATATGCTTGTTCTGCAGCTTATTCAAGTGATGGACAATATTTGGCTGCAGGAAGGCTTGGATATGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR GCA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAGAGCTGATACGGAAATaGTGTAGTAGTGCTCCAGAT +
Preference number: 2 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSELIRK*CSSAPD
Trigger: ATCTGGAGCACTACTACAGCATTTCCGTATCAGCTC...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 90 bp TGGTCACTGGCAGACTTGACTCTTTCCCCAATATCTCCCAGAATTTaGATAAGTTTCTGCTCCTTGGAAAACTCATCATTCAAGGCTTTA +
Preference number: 2 (lower is better)
Translates to: WSLADLTLSPISPRI*ISFCSLENSSFKAL
Trigger: TAAAGCCTTGAATGATGAGTTTTCCAAGGAGCAGAAACTTATCAAAATTCTGGGAGATATTGGGGAAAGAGTCAAGTCTGCCAGTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR GCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: GVCFCESLAICFIHSFSGFWNVV*CIHCEA
Trigger: AGCTTCACAGTGTATGCAGCACACAACATTCCAGAA...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR GCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCATTTGCATTGTTGGTTaGACAGGCAATCCCAAACAG +
Preference number: 2 (lower is better)
Translates to: GVCFCESLAICFIHSFSGICIVG*TGNPKQ
Trigger: CTGTTTGGGATTGCCTGTGCAACCAACAATGCAAAT...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CCA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAGCTGGTAGATGGATGTaGATAGTTCAGTTGTTACCT +
Preference number: 2 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSAGRWM*IVQLLP
Trigger: AGGTAACAACTGAACTATCCACATCCATCTACCAGC...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CCA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATATCCATCTTCTCAAAATaGTATGCATTTCTGAAACAG +
Preference number: 2 (lower is better)
Translates to: AYSIISSRFKSSWLCFLISIFSK*YAFLKQ
Trigger: CTGTTTCAGAAATGCATACCATTTTGAGAAGATGGA...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR TCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCGCACATGGCATAAAATaGAGAGGTTGTGTTGAGTTA +
Preference number: 2 (lower is better)
Translates to: GVCFCESLAICFIHSFSGAHGIK*RGCVEL
Trigger: TAACTCAACACAACCTCTTCATTTTATGCCATGTGC...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR TCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAACATACACTTAGAATATaGTCTTTGGGGAGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: SSLKNNADVFAHRISIDEHTLRI*SLGSSW
Trigger: CCAGCTACTCCCCAAAGATCATATTCTAAGTGTATG...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR TCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATTCTGCAGGTGGAGCTaGATAACAGATTTATCTTTT +
Preference number: 2 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKFCRWS*ITDLSF
Trigger: AAAAGATAAATCTGTTATTCAGCTCCACCTGCAGAA...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR GCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTACAGGCTGAAAATCTaGATAAAAGCTGTTACAGTA +
Preference number: 2 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQYRLKI*IKAVTV
Trigger: TACTGTAACAGCTTTTATGCAGATTTTCAGCCTGTA...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 90 bp CTTTATTTTCTTGGTAAAATGACTTGTTGCTTCCAGGTCTGTGTCTaGTGGACGAAGATTATTATACACATATTTCAGGTCTTGAATTCC +
Preference number: 2 (lower is better)
Translates to: LYFLGKMTCCFQVCV*WTKIIIHIFQVLNS
Trigger: GGAATTCAAGACCTGAAATATGTGTATAATAATCTTCGTCCACAAGACACAGACCTGGAAGCAACAAGTCATTTTACCAAGAAAATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 72 bp AGACGATGGGCAACCTGGATGCTCTGCAAGGAGCGGTaGAGTAGAAGTTGCACTAAAGGACTCTCAAGGTTC +
Preference number: 3 (lower is better)
Translates to: RRWATWMLCKER*SRSCTKGLSRF
Trigger: GAACCTTGAGAGTCCTTTAGTGCAACTTCTACTCCACCGCTCCTTGCAGAGCATCCAGGTTGCCCATCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATCAGGTTTCTGGAATGTaGTGTGCTGCATACACTGTG +
Preference number: 3 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHQVSGM*CAAYTV
Trigger: CACAGTGTATGCAGCACACAACATTCCAGAAACCTG...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTGCCAGTAAATTTGCATaGTTGGTTGCACAGGCAATC +
Preference number: 3 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSASKFA*LVAQAI
Trigger: GATTGCCTGTGCAACCAACAATGCAAATTTACTGGC...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR TCA 72 bp GCTGGAAAATCAATCTGCAGGGTCACCGGGGATGGCTaGCTTACATCCCACACTCCTGGAGTTATCATTTCT +
Preference number: 3 (lower is better)
Translates to: AGKSICRVTGDG*LTSHTPGVIIS
Trigger: AGAAATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAGATTGATTTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR GCA 72 bp TTTGTAGCTGTGCACCCAGGTTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCTGAGGTGGGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: FVAVHPGFWNVV*CIHCEAEVGRK
Trigger: CTTCCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGGGTGCACAGCTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR GCA 72 bp TTTTTAGCAGCCAGTAAAGACGATGGGCAACCTGGATaGTCTGCAAGGAGCGGTGGAGTAGAAGTTGCACTA +
Preference number: 3 (lower is better)
Translates to: FLAASKDDGQPG*SARSGGVEVAL
Trigger: TAGTGCAACTTCTACTCCACCGCTCCTTGCAGAGCATCCAGGTTGCCCATCGTCTTTACTGGCTGCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 72 bp AGTAGCTGGAAAATCAATCTGCAGGGTCACCGGGGATaGCTGACTTACATCCCACACTCCTGGAGTTATCAT +
Preference number: 3 (lower is better)
Translates to: SSWKINLQGHRG*LTYIPHSWSYH
Trigger: ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAGATTGATTTTCCAGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 72 bp TTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTaGAAAATCAATCTGCAGGGTCACCGGGGATGGCTG +
Preference number: 3 (lower is better)
Translates to: FRIRFHILPPSS*KINLQGHRGWL
Trigger: CAGCCATCCCCGGTGACCCTGCAGATTGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGATCCACGCCAGTAAATTaGCATTGTTGGTTGCACAGG +
Preference number: 3 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGSTPVN*HCWLHR
Trigger: CCTGTGCAACCAACAATGCAAATTTACTGGCGTGGA...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATACAGTACCTCCTGTCTTaGATGGTCACTGGCAGACTT +
Preference number: 3 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIQYLLS*MVTGRL
Trigger: AAGTCTGCCAGTGACCATCAAAGACAGGAGGTACTG...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGGGAGTAGCTGGTCATTaGTGCAAAAATGCAGAATTT +
Preference number: 3 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRGVAGH*CKNAEF
Trigger: AAATTCTGCATTTTTGCACAAATGACCAGCTACTCC...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTCTCTATCAAGCCTTTaGCTGAAGTCTCTGAACTTT +
Preference number: 3 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRSLSSL*LKSLNF
Trigger: AAAGTTCAGAGACTTCAGCAAAAGGCTTGATAGAGA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCTCTGTAGTTTCTCACTaGGCACAGCTTCTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFSVVSH*AQLLSS
Trigger: GCTGGAAAGAAGCTGTGCCAAGTGAGAAACTACAGA...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTAAGTAAATTTGCATTGTaGGTTGCACAGGCAATCCCA +
Preference number: 3 (lower is better)
Translates to: DLHPTLLELSFLREAHSVSKFAL*VAQAIP
Trigger: TGGGATTGCCTGTGCAACCAACAATGCAAATTTACT...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTACAGATCTTCCCAGAATaGAAATTAACATCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: DLHPTLLELSFLREAHSVQIFPE*KLTSAA
Trigger: TGCAGCTGATGTTAATTTCAATTCTGGGAAGATCTG...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR TCA 72 bp TTTTCTTTCAATGGTCCTATCAGTCCAGAATGGCGATaGATCTTTGCTAGGGTCACAGCATCAGGTACCATC +
Preference number: 3 (lower is better)
Translates to: FSFNGPISPEWR*IFARVTASGTI
Trigger: GATGGTACCTGATGCTGTGACCCTAGCAAAGATTCATCGCCATTCTGGACTGATAGGACCATTGAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR TCA 72 bp ATGTGGCCCGACTTTGTCAGCATGATATTATCATTGTaGCGGTCACATACTCCCAGGATGAATGTTACCACA +
Preference number: 3 (lower is better)
Translates to: MWPDFVSMILSL*RSHTPRMNVTT
Trigger: TGTGGTAACATTCATCCTGGGAGTATGTGACCGTCACAATGATAATATCATGCTGACAAAGTCGGGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR TCA 72 bp TCAATCGACCTAGTTGTACTCAGCAAACAGGATTCCTaGGGAAAAGTCTGTGAAGTAGATTTGGCAGGGCTT +
Preference number: 3 (lower is better)
Translates to: SIDLVVLSKQDS*GKVCEVDLAGL
Trigger: AAGCCCTGCCAAATCTACTTCACAGACTTTTCCTCAGGAATCCTGTTTGCTGAGTACAACTAGGTCGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 72 bp TCTGTCAGGCTTGTTTCGTTGTTGCTGTGTGTCACCTaGATCAGATACAGATTACTGGATTTCTTGCTGAAC +
Preference number: 3 (lower is better)
Translates to: SVRLVSLLLCVT*IRYRLLDFLLN
Trigger: GTTCAGCAAGAAATCCAGTAATCTGTATCTGATCCAGGTGACACACAGCAACAACGAAACAAGCCTGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR GCA 72 bp GCTCAAATGATTTTTCTGTCAGGCTTGTTTCGTTGTTaGTGTGTGTCACCTGGATCAGATACAGATTACTGG +
Preference number: 3 (lower is better)
Translates to: AQMIFLSGLFRC*CVSPGSDTDYW
Trigger: CCAGTAATCTGTATCTGATCCAGGTGACACACAGCAACAACGAAACAAGCCTGACAGAAAAATCATTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR GCA 72 bp CCTAGGTACACAGGTGATGATTCTTCAACTGTTTGTTaGACAGCCTCAGAGAGGAAAAAGCTAAGTACACAA +
Preference number: 3 (lower is better)
Translates to: PRYTGDDSSTVC*TASERKKLSTQ
Trigger: TTGTGTACTTAGCTTTTTCCTCTCTGAGGCTGTGCAACAAACAGTTGAAGAATCATCACCTGTGTACCTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAGCATCTGTAATTTGTTaGGTTTCCACACACCCTAGA +
Preference number: 3 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKASVIC*VSTHPR
Trigger: TCTAGGGTGTGTGGAAACCAAACAAATTACAGATGC...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCTACTGCATCTGTAATTaGTTTGGTTTCCACACACCC +
Preference number: 3 (lower is better)
Translates to: GVCFCESLAICFIHSFSGYCICN*FGFHTP
Trigger: GGGTGTGTGGAAACCAAACAAATTACAGATGCAGTA...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAAATTTGCATTGTTGGTaGCACAGGCAATCCCAAACA +
Preference number: 3 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSNLHCW*HRQSQT
Trigger: TGTTTGGGATTGCCTGTGCAACCAACAATGCAAATT...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAATGTGGATAGTTCAGTaGTTACCTTCTCTATCAAGC +
Preference number: 3 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKMWIVQ*LPSLSS
Trigger: GCTTGATAGAGAAGGTAACAACTGAACTATCCACAT...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 72 bp ATTCTTCAGAGCCACATACACTTAGAATATGATCTTTaGGGAGTAGCTGGTCATTTGTGCAAAAATGCAGAA +
Preference number: 3 (lower is better)
Translates to: ILQSHIHLEYDL*GVAGHLCKNAE
Trigger: TTCTGCATTTTTGCACAAATGACCAGCTACTCCCCAAAGATCATATTCTAAGTGTATGTGGCTCTGAAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR-3UTR CAA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAAATATCTCCCAGAATTTaGATAAGTTTCTGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: SSLKNNADVFAHRISIDEISPRI*ISFCSL
Trigger: CAAGGAGCAGAAACTTATCAAAATTCTGGGAGATAT...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR GCA 72 bp GACAAGTATTTACATCTTGAAAGAACTCTTCTAGTCTaGCAATTTCTTTCTTCAGTACCTCCTGTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: DKYLHLERTLLV*QFLSSVPPVFD
Trigger: ATCAAAGACAGGAGGTACTGAAGAAAGAAATTGGCAGACTAGAAGAGTTCTTTCAAGATGTAAATACTTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CCA 72 bp GTTTTACTCTTCACAATAAGCATTAAGACATGTCCTTaGAGCTCTGTGACTTCATCATATACTACAATTTCA +
Preference number: 3 (lower is better)
Translates to: VLLFTISIKTCP*SSVTSSYTTIS
Trigger: TGAAATTGTAGTATATGATGAAGTCACAGAGCTCCAAGGACATGTCTTAATGCTTATTGTGAAGAGTAAAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATGTCACCGGGGATGGCTaGCTTACATCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHVTGDG*LTSHTP
Trigger: AGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGAC...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATGATGGGCAACCTGGATaGTCTGCAAGGAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHDGQPG*SARSGG
Trigger: TCCACCGCTCCTTGCAGAGCATCCAGGTTGCCCATC...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTAGTCCAGAATGGCGATaGATCTTTGCTAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSSPEWR*IFARVT
Trigger: TGTGACCCTAGCAAAGATTCATCGCCATTCTGGACT...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTCTGAGGAAAAGTCTGTaGAGTAGATTTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSLRKSL*SRFGRA
Trigger: AGCCCTGCCAAATCTACTTCACAGACTTTTCCTCAG...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTGGCTTGTTTCGTTGTTaGTGTGTGTCACCTGGATCA +
Preference number: 4 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSGLFRC*CVSPGS
Trigger: TGATCCAGGTGACACACAGCAACAACGAAACAAGCC...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGTCACCGGGGATGGCTaGCTTACATCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQVTGDG*LTSHTP
Trigger: AGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGAC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGATGGGCAACCTGGATaGTCTGCAAGGAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQDGQPG*SARSGG
Trigger: TCCACCGCTCCTTGCAGAGCATCCAGGTTGCCCATC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTATAAAATTCAACATGTaGACTGGGCGCAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSIKFNM*TGRRAI
Trigger: GATGGCTCTGCGCCCAGTGCACATGTTGAATTTTAT...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGAACTGTGAAGCTGAGGTaGGAAGGAAGCCCGGGATTT +
Preference number: 4 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGTVKLR*EGSPGF
Trigger: AAATCCCGGGCTTCCTTCCCACCTCAGCTTCACAGT...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAGGGTCACCGGGGATaGCTGACTTACATCCCACAC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQGHRG*LTYIPH
Trigger: GTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGACGATGGGCAACCTaGATGCTCTGCAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRRWAT*MLCKER
Trigger: CCGCTCCTTGCAGAGCATCCAGGTTGCCCATCGTCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATAAGACGATGGGCAACCTaGATGCTCTGCAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIRRWAT*MLCKER
Trigger: CCGCTCCTTGCAGAGCATCCAGGTTGCCCATCGTCT...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGTCACCGGGGATGGCTaGCTTACATCCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKVTGDG*LTSHTP
Trigger: AGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGAC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATAGAGCCTCTAAAGGTTaGGAAAATGTCCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHRASKG*ENVHLL
Trigger: GAGAAGATGGACATTTTCTCAACCTTTAGAGGCTCT...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGGGTTCCATTCAAACTTaGCAGCCTGAACTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRGSIQT*QPELAV
Trigger: CACAGCTAGTTCAGGCTGTCAAGTTTGAATGGAACC...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGTAGGTGCCACCAATaGGGAAACTCTGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGRCHQ*GNSGRV
Trigger: GACTCTCCCAGAGTTTCCTCATTGGTGGCACCTACC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTGGTACTTCCACTAGCTaGATGGAACAACCTCTATAT +
Preference number: 4 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSGTSTS*MEQPLY
Trigger: ATATAGAGGTTGTTCCATTCAGCTAGTGGAAGTACC...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGCAACCTGGATGCTCTaGAAGGAGCGGTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQATWML*KERWSR
Trigger: TCTACTCCACCGCTCCTTGCAGAGCATCCAGGTTGC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGATGGGCAACCTGGATaGTCTGCAAGGAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKDGQPG*SARSGG
Trigger: TCCACCGCTCCTTGCAGAGCATCCAGGTTGCCCATC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTTCTTCAACTGTTTGTTaGACAGCCTCAGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSSSTVC*TASERK
Trigger: TTTCCTCTCTGAGGCTGTGCAACAAACAGTTGAAGA...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAGGGTCACCGGGGATaGCTGACTTACATCCCACAC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQGHRG*LTYIPH
Trigger: GTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGACGATGGGCAACCTaGATGCTCTGCAAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRRWAT*MLCKER
Trigger: CCGCTCCTTGCAGAGCATCCAGGTTGCCCATCGTCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGTGCTTTGCTAACTTaGTGCCAGGAGAGTTCACGG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGALLT*CQESSR
Trigger: CCGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATAATGGTATGCATTTCTaGAACAGTCCTTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHNGMHF*NSPFIP
Trigger: TGGGATGAAAGGACTGTTTCAGAAATGCATACCATT...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGCAGGGCTTATGGCTaGCATTTGTGCAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGRAYG*HLCKCV
Trigger: CACACACTTGCACAAATGTCAGCCATAAGCCCTGCC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGTAGGTGCCACCAATaGGGAAACTCTGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGRCHQ*GNSGRV
Trigger: GACTCTCCCAGAGTTTCCTCATTGGTGGCACCTACC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGCAACCTGGATGCTCTaGAAGGAGCGGTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKATWML*KERWSR
Trigger: TCTACTCCACCGCTCCTTGCAGAGCATCCAGGTTGC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGATTCAAGGCTTTACCTaGACAGAATTGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRIQGFT*TELESS
Trigger: GCTGCTCTCCAATTCTGTGCAGGTAAAGCCTTGAAT...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGACTGTGAAGCTGAGGTaGGAAGGAAGCCCGGGATTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQTVKLR*EGSPGF
Trigger: AAATCCCGGGCTTCCTTCCCACCTCAGCTTCACAGT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTCTGCAAGGAGCGGTaGAGTAGAAGTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGLCKER*SRSCTK
Trigger: TTTAGTGCAACTTCTACTCCACCGCTCCTTGCAGAG...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTTACCTGCACAGAATTaGAGAGCAGCTAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRLPAQN*RAASSF
Trigger: GAAGCTACTAGCTGCTCTCCAATTCTGTGCAGGTAA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATAATTCAACATGTGCACTaGGCGCAGAGCCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIIQHVH*AQSHLG
Trigger: TCCCAGATGGCTCTGCGCCCAGTGCACATGTTGAAT...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATTCAACATGTGCACTaGGCGCAGAGCCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQIQHVH*AQSHLG
Trigger: TCCCAGATGGCTCTGCGCCCAGTGCACATGTTGAAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
3UTR CAA 72 bp TCAATGGTCCTATCAGTCCAGAATGGCGATGAATCTTaGCTAGGGTCACAGCATCAGGTACCATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SMVLSVQNGDES*LGSQHQVPSAP
Trigger: TGGTGCAGATGGTACCTGATGCTGTGACCCTAGCAAAGATTCATCGCCATTCTGGACTGATAGGACCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGTGCTTTGCTAACTTaGTGCCAGGAGAGTTCACGG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGALLT*CQESSR
Trigger: CCGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCCCACATTCCGGGTTaGAGAGAGCCTTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSHIPG*REPFKS
Trigger: GCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGTACCTCCTGTCTTTaGTGGTCACTGGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSTSCL*WSLADL
Trigger: CAAGTCTGCCAGTGACCATCAAAGACAGGAGGTACT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCACATACTCCCAGGATaGATGTTACCACACACCAGC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQHILPG*MLPHTS
Trigger: GCTGGTGTGTGGTAACATTCATCCTGGGAGTATGTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGCAGGGCTTATGGCTaGCATTTGTGCAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGRAYG*HLCKCV
Trigger: CACACACTTGCACAAATGTCAGCCATAAGCCCTGCC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCGGCAGGGCTTATGGCTaGCATTTGTGCAAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFGRAYG*HLCKCV
Trigger: CACACACTTGCACAAATGTCAGCCATAAGCCCTGCC...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCTCTGGGAGAGTCAGTaGTGCAAACTGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLWESQ*CKLLLK
Trigger: CTTCAGAAGCAGTTTGCATCACTGACTCTCCCAGAG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACCAGACTCGTATTGCTaGTTTGAGGTACTTCCACTA +
Preference number: 4 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGPDSYC*FEVLPL
Trigger: TAGTGGAAGTACCTCAAAGCAGCAATACGAGTCTGG...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTAAGGCCAGACTCGTATTaGTGCTTTGAGGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: DLHPTLLELSFLREAHSVRPDSY*CFEVLP
Trigger: TGGAAGTACCTCAAAGCAGCAATACGAGTCTGGCCT...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGACTGTGAAGCTGAGGTaGGAAGGAAGCCCGGGATTT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKTVKLR*EGSPGF
Trigger: AAATCCCGGGCTTCCTTCCCACCTCAGCTTCACAGT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCTCCCACCCAGTAGCTaGAAAATCAATCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLPPSS*KINLQG
Trigger: ACCCTGCAGATTGATTTTCCAGCTACTGGGTGGGAG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATTCAACATGTGCACTaGGCGCAGAGCCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKIQHVH*AQSHLG
Trigger: TCCCAGATGGCTCTGCGCCCAGTGCACATGTTGAAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGGGTGCTTTGCTAACTTaGTGCCAGGAGAGTTCACGG +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQGALLT*CQESSR
Trigger: CCGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACC...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTAGAATCATCAGCACCATaGTGTTTTCCTATGGGGCTT +
Preference number: 4 (lower is better)
Translates to: DLHPTLLELSFLREAHSVESSAP*CFPMGL
Trigger: AAGCCCCATAGGAAAACATCATGGTGCTGATGATTC...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTATCTCTTCTTTCGGCATaGAGTCACTTGAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: DLHPTLLELSFLREAHSVSLLSA*SHLRRM
Trigger: CATCCTTCTCAAGTGACTTCATGCCGAAAGAAGAGA...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCCCACATTCCGGGTTaGAGAGAGCCTTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSHIPG*REPFKS
Trigger: GCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGTTCCATTCAAACTTaGCAGCCTGAACTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGSIQT*QPELAV
Trigger: CACAGCTAGTTCAGGCTGTCAAGTTTGAATGGAACC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCAGTACCTCCTGTCTTTaGTGGTCACTGGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFSTSCL*WSLADL
Trigger: CAAGTCTGCCAGTGACCATCAAAGACAGGAGGTACT...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGAACAAGCATATCCTaGCGAAGATCATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRTSIS*RRSSPA
Trigger: GGCTGGAGATGATCTTCGTCAGGATATGCTTGTTCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGTCCAGAATGGCGATaGATCTTTGCTAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSPEWR*IFARVT
Trigger: TGTGACCCTAGCAAAGATTCATCGCCATTCTGGACT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCACATACTCCCAGGATaGATGTTACCACACACCAGC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKHILPG*MLPHTS
Trigger: GCTGGTGTGTGGTAACATTCATCCTGGGAGTATGTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACCGACTTTGTCAGCATaGTATTATCATTGTGACGGT +
Preference number: 4 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGPTLSA*YYHCDG
Trigger: ACCGTCACAATGATAATATCATGCTGACAAAGTCGG...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCTGAGGAAAAGTCTGTaGAGTAGATTTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLRKSL*SRFGRA
Trigger: AGCCCTGCCAAATCTACTTCACAGACTTTTCCTCAG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCTCTGGGAGAGTCAGTaGTGCAAACTGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLWESQ*CKLLLK
Trigger: CTTCAGAAGCAGTTTGCATCACTGACTCTCCCAGAG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAGGTAGGTGCCACCAATaGGGAAACTCTGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKGRCHQ*GNSGRV
Trigger: GACTCTCCCAGAGTTTCCTCATTGGTGGCACCTACC...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGATGCCTTACTTATGTaGTTCAGAGGCCCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQDALLM*FRGPEV
Trigger: CACTTCTGGGCCTCTGAATCACATAAGTAAGGCATC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCCTCACGACCAAAATaGTTCCAGCTCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSSRPK*FQLRQK
Trigger: CTTCTGCCTGAGCTGGAATCATTTTGGTCGTGAGGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675017.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGGCCAGACTCGTATTaGTGCTTTGAGGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRPDSY*CFEVLP
Trigger: TGGAAGTACCTCAAAGCAGCAATACGAGTCTGGCCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCGGTGGAGTAGAAGTTaGACTAAAGGACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRWSRS*TKGLSR
Trigger: CCTTGAGAGTCCTTTAGTGCAACTTCTACTCCACCG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAGCAACCTGGATGCTCTaGAAGGAGCGGTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSATWML*KERWSR
Trigger: TCTACTCCACCGCTCCTTGCAGAGCATCCAGGTTGC...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGCTTGTTTCGTTGTTaGTGTGTGTCACCTGGATCA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGLFRC*CVSPGS
Trigger: TGATCCAGGTGACACACAGCAACAACGAAACAAGCC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTACAAAGAGAAATTCTTaGTGTTCATACTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSTKRNS*CSYCFS
Trigger: CGAAAAGCAGTATGAACACCAAGAATTTCTCTTTGT...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCATGATGTTTTCCTATaGGGCTTCCCCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQHDVFL*GFPRSI
Trigger: AATGCTCCTGGGGAAGCCCCATAGGAAAACATCATG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCTCCCACCCAGTAGCTaGAAAATCAATCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLPPSS*KINLQG
Trigger: ACCCTGCAGATTGATTTTCCAGCTACTGGGTGGGAG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCTCTGCAAGGAGCGGTaGAGTAGAAGTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLCKER*SRSCTK
Trigger: TTTAGTGCAACTTCTACTCCACCGCTCCTTGCAGAG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGGCGCAGAGCCATCTaGGAGATGAATGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGRRAI*EMNVFH
Trigger: ATGAAAAACATTCATCTCCCAGATGGCTCTGCGCCC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGAATCATCAGCACCATaGTGTTTTCCTATGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQESSAP*CFPMGL
Trigger: AAGCCCCATAGGAAAACATCATGGTGCTGATGATTC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCTCTTCTTTCGGCATaGAGTCACTTGAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSLLSA*SHLRRM
Trigger: CATCCTTCTCAAGTGACTTCATGCCGAAAGAAGAGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGTACTTCCACTAGCTaGATGGAACAACCTATTGAC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGTSTS*MEQPID
Trigger: GTCAATAGGTTGTTCCATTCAGCTAGTGGAAGTACC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTTCTGCAGGTGGAGCTaGATAACAGATTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRFCRWS*ITDLSF
Trigger: AAAAGATAAATCTGTTATTCAGCTCCACCTGCAGAA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGTTCCATTCAAACTTaGCAGCCTGAACTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGSIQT*QPELAV
Trigger: CACAGCTAGTTCAGGCTGTCAAGTTTGAATGGAACC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGAACAAGCATATCCTaGCGAAGATCATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRTSIS*RRSSPA
Trigger: GGCTGGAGATGATCTTCGTCAGGATATGCTTGTTCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGTCCAGAATGGCGATaGATCTTTGCTAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSPEWR*IFARVT
Trigger: TGTGACCCTAGCAAAGATTCATCGCCATTCTGGACT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCTGAGGAAAAGTCTGTaGAGTAGATTTGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLRKSL*SRFGRA
Trigger: AGCCCTGCCAAATCTACTTCACAGACTTTTCCTCAG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGATACTGGATTTCTTGCTaGACCCTAAAATTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGYWISC*TLKLLL
Trigger: GAGCAACAATTTTAGGGTTCAGCAAGAAATCCAGTA...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGATGCCTTACTTATGTaGTTCAGAGGCCCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKDALLM*FRGPEV
Trigger: CACTTCTGGGCCTCTGAATCACATAAGTAAGGCATC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGACCCTGTGCTGTCTTTaGCAACAAAGATGCCTTACT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQTLCCL*QQRCLT
Trigger: AGTAAGGCATCTTTGTTGTCAAAGACAGCACAGGGT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGGGATTTGGATCCGTTTaGCAAGAATATGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRGFGSV*QEYAIF
Trigger: AAAAATGGCATATTCTTGGCAAACGGATCCAAATCC...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGAAGGACTAAAACCAATTaGTGGTGCTTTGCTAACTTG +
Preference number: 4 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGRTKTN*WCFANL
Trigger: CAAGTTAGCAAAGCACCAGCAATTGGTTTTAGTCCT...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCCAGACTCGTATTGCTaGTTTGAGGTACTTCCACTA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQPDSYC*FEVLPL
Trigger: TAGTGGAAGTACCTCAAAGCAGCAATACGAGTCTGG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGGCCAGACTCGTATTaGTGCTTTGAGGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRPDSY*CFEVLP
Trigger: TGGAAGTACCTCAAAGCAGCAATACGAGTCTGGCCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGAGCTGATACGGAAATaGTGTAGTAGTGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQELIRK*CSSAPD
Trigger: ATCTGGAGCACTACTACAGCATTTCCGTATCAGCTC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCGGTGGAGTAGAAGTTaGACTAAAGGACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRWSRS*TKGLSR
Trigger: CCTTGAGAGTCCTTTAGTGCAACTTCTACTCCACCG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATTCAAGGCTTTACCTaGACAGAATTGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQIQGFT*TELESS
Trigger: GCTGCTCTCCAATTCTGTGCAGGTAAAGCCTTGAAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGCATCAGGTACCATCTaGACCAATCCTTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQASGTI*TNPWSF
Trigger: AAAAGACCAAGGATTGGTGCAGATGGTACCTGATGC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGCTTGTTTCGTTGTTaGTGTGTGTCACCTGGATCA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGLFRC*CVSPGS
Trigger: TGATCCAGGTGACACACAGCAACAACGAAACAAGCC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATAAAATTCAACATGTaGACTGGGCGCAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQIKFNM*TGRRAI
Trigger: GATGGCTCTGCGCCCAGTGCACATGTTGAATTTTAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGACTAAAACCAATTGCTaGTGCTTTGCTAACTTGATG +
Preference number: 4 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRTKTNC*CFANLM
Trigger: CATCAAGTTAGCAAAGCACCAGCAATTGGTTTTAGT...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCATGATGTTTTCCTATaGGGCTTCCCCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKHDVFL*GFPRSI
Trigger: AATGCTCCTGGGGAAGCCCCATAGGAAAACATCATG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTCTTTTGGAAACAGTaGAAGACAAGTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQFFWKQ*KTSPRQ
Trigger: CTGGCGTGGACTTGTCTTCCACTGTTTCCAAAAGAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAACAGGGTCACCGGGGATaGCTGACTTACATCCCACAC +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDEQGHRG*LTYIPH
Trigger: GTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTG...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGCTCCCACCCAGTAGCTaGAAAATCAATCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQLPPSS*KINLQG
Trigger: ACCCTGCAGATTGATTTTCCAGCTACTGGGTGGGAG...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCTCTGCAAGGAGCGGTaGAGTAGAAGTTGCACTAAA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLCKER*SRSCTK
Trigger: TTTAGTGCAACTTCTACTCCACCGCTCCTTGCAGAG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTACCTGCACAGAATTaGAGAGCAGCTAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLPAQN*RAASSF
Trigger: GAAGCTACTAGCTGCTCTCCAATTCTGTGCAGGTAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGGCGCAGAGCCATCTaGGAGATGAATGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGRRAI*EMNVFH
Trigger: ATGAAAAACATTCATCTCCCAGATGGCTCTGCGCCC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGATTTTTCTTTATCGAGTaGGACACTACAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGFFFIE*DTTESD
Trigger: ATCCGACTCTGTAGTGTCCCACTCGATAAAGAAAAA...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATGGTGCTTTGCTAACTTaGTGCCAGGAGAGTTCACGG +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHGALLT*CQESSR
Trigger: CCGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACC...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCCCACATTCCGGGTTaGAGAGAGCCTTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKSHIPG*REPFKS
Trigger: GCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGA...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCATACACTTAGAATATaGTCTTTGGGGAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQHTLRI*SLGSSW
Trigger: CCAGCTACTCCCCAAAGATCATATTCTAAGTGTATG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAAACAGTTTTACAGTaGGCATGGATTCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQTVLQ*AWIPLE
Trigger: TTCCAAGGGAATCCATGCTCACTGTAAAACTGTTTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGGAGTCTGTTTCTGTaGAAGTCTGGCAATATGTTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGSLFL*KSGNMF
Trigger: AAACATATTGCCAGACTTTCACAGAAACAGACTCCC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATAGGGAGTCTGTTTCTGTaGAAGTCTGGCAATATGTTT +
Preference number: 4 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIGSLFL*KSGNMF
Trigger: AAACATATTGCCAGACTTTCACAGAAACAGACTCCC...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGAGCCTCTAAAGGTTaGGAAAATGTCCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRASKG*ENVHLL
Trigger: GAGAAGATGGACATTTTCTCAACCTTTAGAGGCTCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTAATATTGTCCATCACTTaGATAAGCTGCAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: DLHPTLLELSFLREAHSVILSIT*ISCRTS
Trigger: GCTTGTTCTGCAGCTTATTCAAGTGATGGACAATAT...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCCACATACTCCCAGGATaGATGTTACCACACACCAGC +
Preference number: 4 (lower is better)
Translates to: GVCFCESLAICFIHSFSGHILPG*MLPHTS
Trigger: GCTGGTGTGTGGTAACATTCATCCTGGGAGTATGTG...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATGATATTATCATTGTaGCGGTCACATACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQMILSL*RSHTPR
Trigger: CCTGGGAGTATGTGACCGTCACAATGATAATATCAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCCGACTTTGTCAGCATaGTATTATCATTGTGACGGT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQPTLSA*YYHCDG
Trigger: ACCGTCACAATGATAATATCATGCTGACAAAGTCGG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGACATATTTCAGGTCTTaGATTCCACTTAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQTYFRS*IPLSSG
Trigger: GCCTGAGCTAAGTGGAATTCAAGACCTGAAATATGT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGCAAACAGGATTCCTaGGGAAAAGTCTGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSKQDS*GKVCEV
Trigger: TACTTCACAGACTTTTCCTCAGGAATCCTGTTTGCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCCTCTGGGAGAGTCAGTaGTGCAAACTGCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GVCFCESLAICFIHSFSGLWESQ*CKLLLK
Trigger: CTTCAGAAGCAGTTTGCATCACTGACTCTCCCAGAG...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGACCCTGTGCTGTCTTTaGCAACAAAGATGCCTTACT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKTLCCL*QQRCLT
Trigger: AGTAAGGCATCTTTGTTGTCAAAGACAGCACAGGGT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTAAGATTAGGGTGGAGTaGCCAGCCTTCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIKIRVE*PAFPLP
Trigger: AGGCAAGGGGAAGGCTGGTCACTCCACCCTAATCTT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCCAGACTCGTATTGCTaGTTTGAGGTACTTCCACTA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKPDSYC*FEVLPL
Trigger: TAGTGGAAGTACCTCAAAGCAGCAATACGAGTCTGG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGAGCTGATACGGAAATaGTGTAGTAGTGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKELIRK*CSSAPD
Trigger: ATCTGGAGCACTACTACAGCATTTCCGTATCAGCTC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTGGAATGTTGTGTGCTaGATACACTGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKWNVVC*IHCEAE
Trigger: CTCAGCTTCACAGTGTATGCAGCACACAACATTCCA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQFWNVV*CIHCEA
Trigger: AGCTTCACAGTGTATGCAGCACACAACATTCCAGAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGAAAATTGATCCTGTaGACCCAGGTTTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGKLIL*TQVSGM
Trigger: CATTCCAGAAACCTGGGTGCACAGGATCAATTTTCC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433979.6
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATTTGCATTGTTGGTTaGACAGGCAATCCCAAACAG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQICIVG*TGNPKQ
Trigger: CTGTTTGGGATTGCCTGTGCAACCAACAATGCAAAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGCGGTGGAGTAGAAGTTaGACTAAAGGACTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQRWSRS*TKGLSR
Trigger: CCTTGAGAGTCCTTTAGTGCAACTTCTACTCCACCG...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATTCAAGGCTTTACCTaGACAGAATTGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKIQGFT*TELESS
Trigger: GCTGCTCTCCAATTCTGTGCAGGTAAAGCCTTGAAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATATCCAAGCCTTCCTaGAGCCAAATATTGTCCATC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQISKPS*SQILSI
Trigger: GATGGACAATATTTGGCTGCAGGAAGGCTTGGATAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATAATATCCAAGCCTTCCTaGAGCCAAATATTGTCCATC +
Preference number: 4 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIISKPS*SQILSI
Trigger: GATGGACAATATTTGGCTGCAGGAAGGCTTGGATAT...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGCATCAGGTACCATCTaGACCAATCCTTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKASGTI*TNPWSF
Trigger: AAAAGACCAAGGATTGGTGCAGATGGTACCTGATGC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGTAAAATGACTTGTTaGTTCCAGGTCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGKMTC*FQVCVL
Trigger: CAAGACACAGACCTGGAAGCAACAAGTCATTTTACC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCTTCAACTGTTTGTTaGACAGCCTCAGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSSTVC*TASERK
Trigger: TTTCCTCTCTGAGGCTGTGCAACAAACAGTTGAAGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATAAAATTCAACATGTaGACTGGGCGCAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKIKFNM*TGRRAI
Trigger: GATGGCTCTGCGCCCAGTGCACATGTTGAATTTTAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCTTTGGGGAGTAGCTaGTCATTTGTGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSLGSS*SFVQKC
Trigger: GCATTTTTGCACAAATGACCAGCTACTCCCCAAAGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGCTGGTAGATGGATGTaGATAGTTCAGTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQAGRWM*IVQLLP
Trigger: AGGTAACAACTGAACTATCCACATCCATCTACCAGC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATACTGTGAAGCTGAGGTaGGAAGGAAGCCCGGGATTT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHTVKLR*EGSPGF
Trigger: AAATCCCGGGCTTCCTTCCCACCTCAGCTTCACAGT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTCTTTTGGAAACAGTaGAAGACAAGTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKFFWKQ*KTSPRQ
Trigger: CTGGCGTGGACTTGTCTTCCACTGTTTCCAAAAGAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTACCTGCACAGAATTaGAGAGCAGCTAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLPAQN*RAASSF
Trigger: GAAGCTACTAGCTGCTCTCCAATTCTGTGCAGGTAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATCTGCACCAATCCTTaGTCTTTTCCTGTGGATAGA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQICTNP*SFPVDR
Trigger: TCTATCCACAGGAAAAGACCAAGGATTGGTGCAGAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTGTATTTTCTTTCAATaGTCCTATCAGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRCIFFQ*SYQSRM
Trigger: CATTCTGGACTGATAGGACCATTGAAAGAAAATACA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTGCTGTGTGTCACCTaGATCAGATACAGATTACTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLLCVT*IRYRLL
Trigger: CAGTAATCTGTATCTGATCCAGGTGACACACAGCAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTGTGTTTCACTAGTATaGTCAGCTTCACATCCTCGT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQCVSLV*SASHPR
Trigger: ACGAGGATGTGAAGCTGACCATACTAGTGAAACACA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
3UTR CAA 72 bp AGTGGAAGACAAGTCCACGCCAGTAAATTTGCATTGTaGGTTGCACAGGCAATCCCAAACAGTTTTACAGTG +
Preference number: 4 (lower is better)
Translates to: SGRQVHASKFAL*VAQAIPNSFTV
Trigger: CACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGTGGACTTGTCTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 72 bp TTGGAAACAGTGGAAGACAAGTCCACGCCAGTAAATTaGCATTGTTGGTTGCACAGGCAATCCCAAACAGTT +
Preference number: 4 (lower is better)
Translates to: LETVEDKSTPVN*HCWLHRQSQTV
Trigger: AACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGTGGACTTGTCTTCCACTGTTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 72 bp ATCCAAGCCTTCCTGCAGCCAAATATTGTCCATCACTaGAATAAGCTGCAGAACAAGCATATCCTGACGAAG +
Preference number: 4 (lower is better)
Translates to: IQAFLQPNIVHH*NKLQNKHILTK
Trigger: CTTCGTCAGGATATGCTTGTTCTGCAGCTTATTCAAGTGATGGACAATATTTGGCTGCAGGAAGGCTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTAATACTGCTTTTCGTGTaGTTCATTAGGATTTGGATC +
Preference number: 4 (lower is better)
Translates to: DLHPTLLELSFLREAHSVILLFV*FIRIWI
Trigger: GATCCAAATCCTAATGAATCACACGAAAAGCAGTAT...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATGGAGCTAAAATACTaGATCTGGAATCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQMELKY*IWNHQH
Trigger: GTGCTGATGATTCCAGATTCAGTATTTTAGCTCCAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGCACATGGCATAAAATaGAGAGGTTGTGTTGAGTTA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQAHGIK*RGCVEL
Trigger: TAACTCAACACAACCTCTTCATTTTATGCCATGTGC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCATACACTTAGAATATaGTCTTTGGGGAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKHTLRI*SLGSSW
Trigger: CCAGCTACTCCCCAAAGATCATATTCTAAGTGTATG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAAACAGTTTTACAGTaGGCATGGATTCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQTVLQ*AWIPLE
Trigger: TTCCAAGGGAATCCATGCTCACTGTAAAACTGTTTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGGAGTCTGTTTCTGTaGAAGTCTGGCAATATGTTT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGSLFL*KSGNMF
Trigger: AAACATATTGCCAGACTTTCACAGAAACAGACTCCC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAATGGTATGCATTTCTaGAACAGTCCTTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQNGMHF*NSPFIP
Trigger: TGGGATGAAAGGACTGTTTCAGAAATGCATACCATT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGAGCCTCTAAAGGTTaGGAAAATGTCCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRASKG*ENVHLL
Trigger: GAGAAGATGGACATTTTCTCAACCTTTAGAGGCTCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCAGAACAAGCATATCCTaGCGAAGATCATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GVCFCESLAICFIHSFSGRTSIS*RRSSPA
Trigger: GGCTGGAGATGATCTTCGTCAGGATATGCTTGTTCT...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATATTGTCCATCACTTaGATAAGCTGCAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQILSIT*ISCRTS
Trigger: GCTTGTTCTGCAGCTTATTCAAGTGATGGACAATAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATGATATTATCATTGTaGCGGTCACATACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKMILSL*RSHTPR
Trigger: CCTGGGAGTATGTGACCGTCACAATGATAATATCAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCCGACTTTGTCAGCATaGTATTATCATTGTGACGGT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKPTLSA*YYHCDG
Trigger: ACCGTCACAATGATAATATCATGCTGACAAAGTCGG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGACATATTTCAGGTCTTaGATTCCACTTAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKTYFRS*IPLSSG
Trigger: GCCTGAGCTAAGTGGAATTCAAGACCTGAAATATGT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGCAAACAGGATTCCTaGGGAAAAGTCTGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSKQDS*GKVCEV
Trigger: TACTTCACAGACTTTTCCTCAGGAATCCTGTTTGCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTACTGGATTTCTTGCTaGACCCTAAAATTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQYWISC*TLKLLL
Trigger: GAGCAACAATTTTAGGGTTCAGCAAGAAATCCAGTA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAAACCAATTGCTGGTaGTTTGCTAACTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQKTNCW*FANLMP
Trigger: TGGCATCAAGTTAGCAAAGCACCAGCAATTGGTTTT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGGACTAAAACCAATTaGTGGTGCTTTGCTAACTTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRTKTN*WCFANL
Trigger: CAAGTTAGCAAAGCACCAGCAATTGGTTTTAGTCCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGGAGCTGATACGGAAATaGTGTAGTAGTGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQELIRK*CSSAPD
Trigger: ATCTGGAGCACTACTACAGCATTTCCGTATCAGCTC...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGGAATGTTGTGTGCTaGATACACTGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQWNVVC*IHCEAE
Trigger: CTCAGCTTCACAGTGTATGCAGCACACAACATTCCA...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKFWNVV*CIHCEA
Trigger: AGCTTCACAGTGTATGCAGCACACAACATTCCAGAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATTTGCATTGTTGGTTaGACAGGCAATCCCAAACAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKICIVG*TGNPKQ
Trigger: CTGTTTGGGATTGCCTGTGCAACCAACAATGCAAAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATATCCAAGCCTTCCTaGAGCCAAATATTGTCCATC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKISKPS*SQILSI
Trigger: GATGGACAATATTTGGCTGCAGGAAGGCTTGGATAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGTAAAATGACTTGTTaGTTCCAGGTCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGKMTC*FQVCVL
Trigger: CAAGACACAGACCTGGAAGCAACAAGTCATTTTACC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCTTCAACTGTTTGTTaGACAGCCTCAGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSSTVC*TASERK
Trigger: TTTCCTCTCTGAGGCTGTGCAACAAACAGTTGAAGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTCACTCTCGTAGTGTaGAATTTTGCCACTGATCTC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKFTLVV*NFATDL
Trigger: GAGATCAGTGGCAAAATTCCACACTACGAGAGTGAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCACATGATGTTTTCCTATaGGGCTTCCCCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSHDVFL*GFPRSI
Trigger: AATGCTCCTGGGGAAGCCCCATAGGAAAACATCATG...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCTTCCACTAGCTGAATaGAACAACCTATTGACTCTA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLPLAE*NNLLTL
Trigger: TAGAGTCAATAGGTTGTTCCATTCAGCTAGTGGAAG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCTTTGGGGAGTAGCTaGTCATTTGTGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSLGSS*SFVQKC
Trigger: GCATTTTTGCACAAATGACCAGCTACTCCCCAAAGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGCTGGTAGATGGATGTaGATAGTTCAGTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKAGRWM*IVQLLP
Trigger: AGGTAACAACTGAACTATCCACATCCATCTACCAGC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCTTGATCTGGAAAACTaGAAGTCAAAAGCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLDLEN*KSKAQE
Trigger: CTCTTGGGCTTTTGACTTCCAGTTTTCCAGATCAAG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCCTTGATCTGGAAAACTaGAAGTCAAAAGCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFLDLEN*KSKAQE
Trigger: CTCTTGGGCTTTTGACTTCCAGTTTTCCAGATCAAG...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATCTGCACCAATCCTTaGTCTTTTCCTGTGGATAGA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKICTNP*SFPVDR
Trigger: TCTATCCACAGGAAAAGACCAAGGATTGGTGCAGAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGGTTCAAGAGCAGTTaGCTGTGCTTTCTGATAATA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRFKSS*LCFLII
Trigger: TATTATCAGAAAGCACAGCCAACTGCTCTTGAACCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAGGTCTGTGTCTTGTaGACGAAGATTATTATACAC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQVCVL*TKIIIH
Trigger: GTGTATAATAATCTTCGTCCACAAGACACAGACCTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTGCTGTGTGTCACCTaGATCAGATACAGATTACTG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLLCVT*IRYRLL
Trigger: CAGTAATCTGTATCTGATCCAGGTGACACACAGCAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTGTGTTTCACTAGTATaGTCAGCTTCACATCCTCGT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKCVSLV*SASHPR
Trigger: ACGAGGATGTGAAGCTGACCATACTAGTGAAACACA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAGGGCGCAGAGCCATCTaGGAGATGAATGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKGRRAI*EMNVFH
Trigger: ATGAAAAACATTCATCTCCCAGATGGCTCTGCGCCC...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTTTTCTTTATCGAGTaGGACACTACAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQFFFIE*DTTESD
Trigger: ATCCGACTCTGTAGTGTCCCACTCGATAAAGAAAAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
3UTR CAA 72 bp AACAGTGGAAGACAAGTCCACGCCAGTAAATTTGCATaGTTGGTTGCACAGGCAATCCCAAACAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: NSGRQVHASKFA*LVAQAIPNSFT
Trigger: TGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGTGGACTTGTCTTCCACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATACTGCTTTTCGTGTaGTTCATTAGGATTTGGATC +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQILLFV*FIRIWI
Trigger: GATCCAAATCCTAATGAATCACACGAAAAGCAGTAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGTGGAATTTTGCCACTaGTCTCATCTACTATCTGAT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKVEFCH*SHLLSD
Trigger: ATCAGATAGTAGATGAGATCAGTGGCAAAATTCCAC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTTCCCACATTCCGGGTTaGAGAGAGCCTTTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHISHIPG*REPFKS
Trigger: GCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGA...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAATGGAACAACCTATTaGCTCTATATTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQNGTTY*LYILLP
Trigger: TGGCAGAAGAATATAGAGTCAATAGGTTGTTCCATT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGCACATGGCATAAAATaGAGAGGTTGTGTTGAGTTA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKAHGIK*RGCVEL
Trigger: TAACTCAACACAACCTCTTCATTTTATGCCATGTGC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCGCACATGGCATAAAATaGAGAGGTTGTGTTGAGTTA +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFAHGIK*RGCVEL
Trigger: TAACTCAACACAACCTCTTCATTTTATGCCATGTGC...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGCATACACTTAGAATATaGTCTTTGGGGAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQHTLRI*SLGSSW
Trigger: CCAGCTACTCCCCAAAGATCATATTCTAAGTGTATG...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTCTGCAGGTGGAGCTaGATAACAGATTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQFCRWS*ITDLSF
Trigger: AAAAGATAAATCTGTTATTCAGCTCCACCTGCAGAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAATGGTATGCATTTCTaGAACAGTCCTTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKNGMHF*NSPFIP
Trigger: TGGGATGAAAGGACTGTTTCAGAAATGCATACCATT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGGTTGTCTAATTGTTaGACTGCCACTTTACGAATT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRLSNC*TATLRI
Trigger: AATTCGTAAAGTGGCAGTTCAACAATTAGACAACCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATATTGTCCATCACTTaGATAAGCTGCAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKILSIT*ISCRTS
Trigger: GCTTGTTCTGCAGCTTATTCAAGTGATGGACAATAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGACATATTTCAGGTCTTaGATTCCACTTAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQTYFRS*IPLSSG
Trigger: GCCTGAGCTAAGTGGAATTCAAGACCTGAAATATGT...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATTTTCTTGGTAAAATaGCTTGTTGCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQIFLVK*LVASRS
Trigger: AGACCTGGAAGCAACAAGTCATTTTACCAAGAAAAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGAGCAAACAGGATTCCTaGGGAAAAGTCTGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQSKQDS*GKVCEV
Trigger: TACTTCACAGACTTTTCCTCAGGAATCCTGTTTGCT...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTACTGGATTTCTTGCTaGACCCTAAAATTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKYWISC*TLKLLL
Trigger: GAGCAACAATTTTAGGGTTCAGCAAGAAATCCAGTA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAATCAGTACTCCACTaGAGGAGAAAAGATTATGAA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQSVLH*RRKDYE
Trigger: TTCATAATCTTTTCTCCTTCAGTGGAGTACTGATTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGATTTGGATCCGTTTaGCAAGAATATGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGFGSV*QEYAIF
Trigger: AAAAATGGCATATTCTTGGCAAACGGATCCAAATCC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGCTTCATTTAATGAATaGCCTGTTGAGTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQASFNE*PVESHF
Trigger: AAAATGGGACTCAACAGGGCATTCATTAAATGAAGC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAAAACCAATTGCTGGTaGTTTGCTAACTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKKTNCW*FANLMP
Trigger: TGGCATCAAGTTAGCAAAGCACCAGCAATTGGTTTT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCAAAACCAATTGCTGGTaGTTTGCTAACTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFKTNCW*FANLMP
Trigger: TGGCATCAAGTTAGCAAAGCACCAGCAATTGGTTTT...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGGACTAAAACCAATTaGTGGTGCTTTGCTAACTTG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRTKTN*WCFANL
Trigger: CAAGTTAGCAAAGCACCAGCAATTGGTTTTAGTCCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAGCATCAGGTACCATCTaGACCAATCCTTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKASGTI*TNPWSF
Trigger: AAAAGACCAAGGATTGGTGCAGATGGTACCTGATGC...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGAGTCGGATGTTAATTaGTCCCACAAATACAGTTTT +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQESDVN*SHKYSF
Trigger: AAAACTGTATTTGTGGGAGCAATTAACATCCGACTC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGACTAAAACCAATTGCTaGTGCTTTGCTAACTTGATG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQTKTNC*CFANLM
Trigger: CATCAAGTTAGCAAAGCACCAGCAATTGGTTTTAGT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATCATGATGTTTTCCTATaGGGCTTCCCCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHHDVFL*GFPRSI
Trigger: AATGCTCCTGGGGAAGCCCCATAGGAAAACATCATG...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCTTCCACTAGCTGAATaGAACAACCTATTGACTCTA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLPLAE*NNLLTL
Trigger: TAGAGTCAATAGGTTGTTCCATTCAGCTAGTGGAAG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTAGAATATGATCTTTaGGGAGTAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLEYDL*GVAGHL
Trigger: CAAATGACCAGCTACTCCCCAAAGATCATATTCTAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGGTTCAAGAGCAGTTaGCTGTGCTTTCTGATAATA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRFKSS*LCFLII
Trigger: TATTATCAGAAAGCACAGCCAACTGCTCTTGAACCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAGGTCTGTGTCTTGTaGACGAAGATTATTATACAC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQVCVL*TKIIIH
Trigger: GTGTATAATAATCTTCGTCCACAAGACACAGACCTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGTGTTTCACTAGTATaGTCAGCTTCACATCCTCGT +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQCVSLV*SASHPR
Trigger: ACGAGGATGTGAAGCTGACCATACTAGTGAAACACA...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAATTTCATTGTAAGTaGGGTCCGTACATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQFHCK*GPYILE
Trigger: TTCCAAAATGTACGGACCCCACTTACAATGAAATTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTTTTCTTTATCGAGTaGGACACTACAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKFFFIE*DTTESD
Trigger: ATCCGACTCTGTAGTGTCCCACTCGATAAAGAAAAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
3UTR CAA 72 bp TGCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTaGGCTGTGCTTTCTGATAATATTATAAGCACGACA +
Preference number: 4 (lower is better)
Translates to: CIQHHFQQVQEQ*AVLSDNIISTT
Trigger: TGTCGTGCTTATAATATTATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATACTGCTTTTCGTGTaGTTCATTAGGATTTGGATC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKILLFV*FIRIWI
Trigger: GATCCAAATCCTAATGAATCACACGAAAAGCAGTAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATGAATCATCAGCACCATaGTGTTTTCCTATGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHESSAP*CFPMGL
Trigger: AAGCCCCATAGGAAAACATCATGGTGCTGATGATTC...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTCTCTTCTTTCGGCATaGAGTCACTTGAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHSLLSA*SHLRRM
Trigger: CATCCTTCTCAAGTGACTTCATGCCGAAAGAAGAGA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAATGGAACAACCTATTaGCTCTATATTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKNGTTY*LYILLP
Trigger: TGGCAGAAGAATATAGAGTCAATAGGTTGTTCCATT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATGGTACTTCCACTAGCTaGATGGAACAACCTATTGAC +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHGTSTS*MEQPID
Trigger: GTCAATAGGTTGTTCCATTCAGCTAGTGGAAGTACC...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTCTGCAGGTGGAGCTaGATAACAGATTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKFCRWS*ITDLSF
Trigger: AAAAGATAAATCTGTTATTCAGCTCCACCTGCAGAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGGTTGTCTAATTGTTaGACTGCCACTTTACGAATT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRLSNC*TATLRI
Trigger: AATTCGTAAAGTGGCAGTTCAACAATTAGACAACCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAATGATATTATCATTGTaGCGGTCACATACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKMILSL*RSHTPR
Trigger: CCTGGGAGTATGTGACCGTCACAATGATAATATCAT...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGTTCCACAAAATCTTaGAAATGCTGTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSSTKS*KCCGFF
Trigger: GAAAAACCCACAGCATTTTCAAGATTTTGTGGAACT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCAGTTCCACAAAATCTTaGAAATGCTGTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFSSTKS*KCCGFF
Trigger: GAAAAACCCACAGCATTTTCAAGATTTTGTGGAACT...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATTTTCTTGGTAAAATaGCTTGTTGCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKIFLVK*LVASRS
Trigger: AGACCTGGAAGCAACAAGTCATTTTACCAAGAAAAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAATCAGTACTCCACTaGAGGAGAAAAGATTATGAA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQSVLH*RRKDYE
Trigger: TTCATAATCTTTTCTCCTTCAGTGGAGTACTGATTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGACGCATATATCTTCCTaGAATGAAACACGATCTCAT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKTHISS*NETRSH
Trigger: ATGAGATCGTGTTTCATTTCAGGAAGATATATGCGT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538779.6
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGATTTGGATCCGTTTaGCAAGAATATGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGFGSV*QEYAIF
Trigger: AAAAATGGCATATTCTTGGCAAACGGATCCAAATCC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGCTTCATTTAATGAATaGCCTGTTGAGTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKASFNE*PVESHF
Trigger: AAAATGGGACTCAACAGGGCATTCATTAAATGAAGC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGACTCTATATTCTTCTaGCATGTACTTTCCCACATT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKDSIFF*HVLSHI
Trigger: AATGTGGGAAAGTACATGGCAGAAGAATATAGAGTC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATCCAGACTCGTATTGCTaGTTTGAGGTACTTCCACTA +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHPDSYC*FEVLPL
Trigger: TAGTGGAAGTACCTCAAAGCAGCAATACGAGTCTGG...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTAGGCCAGACTCGTATTaGTGCTTTGAGGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIRPDSY*CFEVLP
Trigger: TGGAAGTACCTCAAAGCAGCAATACGAGTCTGGCCT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATGAGCTGATACGGAAATaGTGTAGTAGTGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHELIRK*CSSAPD
Trigger: ATCTGGAGCACTACTACAGCATTTCCGTATCAGCTC...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTACAGGCTGAAAATCTaGATAAAAGCTGTTACAGTA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQYRLKI*IKAVTV
Trigger: TACTGTAACAGCTTTTATGCAGATTTTCAGCCTGTA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTGGAATGTTGTGTGCTaGATACACTGTGAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHWNVVC*IHCEAE
Trigger: CTCAGCTTCACAGTGTATGCAGCACACAACATTCCA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKFWNVV*CIHCEA
Trigger: AGCTTCACAGTGTATGCAGCACACAACATTCCAGAA...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAATTTGCATTGTTGGTTaGACAGGCAATCCCAAACAG +
Preference number: 4 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSICIVG*TGNPKQ
Trigger: CTGTTTGGGATTGCCTGTGCAACCAACAATGCAAAT...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGAACTCTTCTAGTCTaGCAATTTCTTTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRTLLV*QFLSSV
Trigger: TACTGAAGAAAGAAATTGGCAGACTAGAAGAGTTCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAGGTAAAATGACTTGTTaGTTCCAGGTCTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSGKMTC*FQVCVL
Trigger: CAAGACACAGACCTGGAAGCAACAAGTCATTTTACC...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGAGTCGGATGTTAATTaGTCCCACAAATACAGTTTT +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKESDVN*SHKYSF
Trigger: AAAACTGTATTTGTGGGAGCAATTAACATCCGACTC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGACTAAAACCAATTGCTaGTGCTTTGCTAACTTGATG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKTKTNC*CFANLM
Trigger: CATCAAGTTAGCAAAGCACCAGCAATTGGTTTTAGT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTAGAATATGATCTTTaGGGAGTAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLEYDL*GVAGHL
Trigger: CAAATGACCAGCTACTCCCCAAAGATCATATTCTAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCGCTGGTAGATGGATGTaGATAGTTCAGTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: GVCFCESLAICFIHSFSGAGRWM*IVQLLP
Trigger: AGGTAACAACTGAACTATCCACATCCATCTACCAGC...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCCATCTTCTCAAAATaGTATGCATTTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSIFSK*YAFLKQ
Trigger: CTGTTTCAGAAATGCATACCATTTTGAGAAGATGGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGACGAATTTCTTGATCTaGAAAACTGGAAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQTNFLI*KTGSQK
Trigger: CTTTTGACTTCCAGTTTTCCAGATCAAGAAATTCGT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCATCTGCACCAATCCTTaGTCTTTTCCTGTGGATAGA +
Preference number: 4 (lower is better)
Translates to: GVCFCESLAICFIHSFSGICTNP*SFPVDR
Trigger: TCTATCCACAGGAAAAGACCAAGGATTGGTGCAGAT...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTGTATTTTCTTTCAATaGTCCTATCAGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQCIFFQ*SYQSRM
Trigger: CATTCTGGACTGATAGGACCATTGAAAGAAAATACA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGAGGTTCAAGAGCAGTTaGCTGTGCTTTCTGATAATA +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQRFKSS*LCFLII
Trigger: TATTATCAGAAAGCACAGCCAACTGCTCTTGAACCT...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAATTTCATTGTAAGTaGGGTCCGTACATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQFHCK*GPYILE
Trigger: TTCCAAAATGTACGGACCCCACTTACAATGAAATTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR TCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAATGGAGCTAAAATACTaGATCTGGAATCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKMELKY*IWNHQH
Trigger: GTGCTGATGATTCCAGATTCAGTATTTTAGCTCCAT...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCTTGGTGTTCATACTaGTTTTCGTGTGATTCATTA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSWCSY*FSCDSL
Trigger: TAATGAATCACACGAAAAGCAGTATGAACACCAAGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTACAGGCTGAAAATCTaGATAAAAGCTGTTACAGTA +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKYRLKI*IKAVTV
Trigger: TACTGTAACAGCTTTTATGCAGATTTTCAGCCTGTA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHFWNVV*CIHCEA
Trigger: AGCTTCACAGTGTATGCAGCACACAACATTCCAGAA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGCAGTTTTCATTATTaGAGTAGAAGCGATAAAACC +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSSFHY*SRSDKT
Trigger: GGTTTTATCGCTTCTACTGCAATAATGAAAACTGCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR GCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCAGCAGTTTTCATTATTaGAGTAGAAGCGATAAAACC +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFSSFHY*SRSDKT
Trigger: GGTTTTATCGCTTCTACTGCAATAATGAAAACTGCT...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGACAAAGAGAAATTCTTaGTGTTCATACTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKTKRNS*CSYCFS
Trigger: CGAAAAGCAGTATGAACACCAAGAATTTCTCTTTGT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTTCACTCTCGTAGTGTaGAATTTTGCCACTGATCTC +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHFTLVV*NFATDL
Trigger: GAGATCAGTGGCAAAATTCCACACTACGAGAGTGAA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATGCTGGTAGATGGATGTaGATAGTTCAGTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHAGRWM*IVQLLP
Trigger: AGGTAACAACTGAACTATCCACATCCATCTACCAGC...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAATTCTTTTGGAAACAGTaGAAGACAAGTCCACGCCAG +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDEFFWKQ*KTSPRQ
Trigger: CTGGCGTGGACTTGTCTTCCACTGTTTCCAAAAGAA...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCCATCTTCTCAAAATaGTATGCATTTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSIFSK*YAFLKQ
Trigger: CTGTTTCAGAAATGCATACCATTTTGAGAAGATGGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGACGAATTTCTTGATCTaGAAAACTGGAAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKTNFLI*KTGSQK
Trigger: CTTTTGACTTCCAGTTTTCCAGATCAAGAAATTCGT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCACGAATTTCTTGATCTaGAAAACTGGAAGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFTNFLI*KTGSQK
Trigger: CTTTTGACTTCCAGTTTTCCAGATCAAGAAATTCGT...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTGTATTTTCTTTCAATaGTCCTATCAGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKCIFFQ*SYQSRM
Trigger: CATTCTGGACTGATAGGACCATTGAAAGAAAATACA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTCTCAGGTACCGTTaGCAGTTTTCAGGTACCATT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHILRYR*QFSGTI
Trigger: AATGGTACCTGAAAACTGCCAACGGTACCTGAGAAT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGCTTCCACTAGCTGAATaGAACAACCTCTATATTCTT +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQLPLAE*NNLYIL
Trigger: AAGAATATAGAGGTTGTTCCATTCAGCTAGTGGAAG...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 72 bp GCAGACTTGACTCTTTCCCCAATATCTCCCAGAATTTaGATAAGTTTCTGCTCCTTGGAAAACTCATCATTC +
Preference number: 4 (lower is better)
Translates to: ADLTLSPISPRI*ISFCSLENSSF
Trigger: GAATGATGAGTTTTCCAAGGAGCAGAAACTTATCAAAATTCTGGGAGATATTGGGGAAAGAGTCAAGTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATGGAGCTAAAATACTaGATCTGGAATCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHMELKY*IWNHQH
Trigger: GTGCTGATGATTCCAGATTCAGTATTTTAGCTCCAT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTCATACACTTAGAATATaGTCTTTGGGGAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIHTLRI*SLGSSW
Trigger: CCAGCTACTCCCCAAAGATCATATTCTAAGTGTATG...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAACAAACAGTTTTACAGTaGGCATGGATTCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDEQTVLQ*AWIPLE
Trigger: TTCCAAGGGAATCCATGCTCACTGTAAAACTGTTTG...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAATTTTCTTGGTAAAATaGCTTGTTGCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKIFLVK*LVASRS
Trigger: AGACCTGGAAGCAACAAGTCATTTTACCAAGAAAAT...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTACTTATCATACCACTaGATCAAATCAACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHYLSYH*IKSTGS
Trigger: GCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAGCTTCATTTAATGAATaGCCTGTTGAGTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKASFNE*PVESHF
Trigger: AAAATGGGACTCAACAGGGCATTCATTAAATGAAGC...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATAGGACTAAAACCAATTaGTGGTGCTTTGCTAACTTG +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHRTKTN*WCFANL
Trigger: CAAGTTAGCAAAGCACCAGCAATTGGTTTTAGTCCT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGAGAACTCTTCTAGTCTaGCAATTTCTTTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQRTLLV*QFLSSV
Trigger: TACTGAAGAAAGAAATTGGCAGACTAGAAGAGTTCT...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATACTGGAAAGTCCATTTaGATTGTAAGATTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHTGKSI*IVRLGW
Trigger: CCACCCTAATCTTACAATGCAAATGGACTTTCCAGT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAACCTCTATATTCTTCTaGCATGTACTTTCCCACATT +
Preference number: 4 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSTSIFF*HVLSHI
Trigger: AATGTGGGAAAGTACATGGCAGAAGAATATAGAGGT...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTTCTTTGGGGAGTAGCTaGTCATTTGTGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHISLGSS*SFVQKC
Trigger: GCATTTTTGCACAAATGACCAGCTACTCCCCAAAGA...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAATCTTTGGGGAGTAGCTaGTCATTTGTGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDESLGSS*SFVQKC
Trigger: GCATTTTTGCACAAATGACCAGCTACTCCCCAAAGA...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTCCATCTTCTCAAAATaGTATGCATTTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQSIFSK*YAFLKQ
Trigger: CTGTTTCAGAAATGCATACCATTTTGAGAAGATGGA...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAATTGCTGTGTGTCACCTaGATCAGATACAGATTACTG +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDELLCVT*IRYRLL
Trigger: CAGTAATCTGTATCTGATCCAGGTGACACACAGCAA...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
3UTR CAA 72 bp CTTGGTAAAATGACTTGTTGCTTCCAGGTCTGTGTCTaGTGGACGAAGATTATTATACACATATTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LGKMTCCFQVCV*WTKIIIHIFQV
Trigger: GACCTGAAATATGTGTATAATAATCTTCGTCCACAAGACACAGACCTGGAAGCAACAAGTCATTTTACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATAATGGAACAACCTATTaGCTCTATATTCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHNGTTY*LYILLP
Trigger: TGGCAGAAGAATATAGAGTCAATAGGTTGTTCCATT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTGCACATGGCATAAAATaGAGAGGTTGTGTTGAGTTA +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIAHGIK*RGCVEL
Trigger: TAACTCAACACAACCTCTTCATTTTATGCCATGTGC...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTTCTGCAGGTGGAGCTaGATAACAGATTTATCTTTT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHFCRWS*ITDLSF
Trigger: AAAAGATAAATCTGTTATTCAGCTCCACCTGCAGAA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATCAATTCTCAATAATTTaGTTCTCACTGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHQFSII*FSLVQE
Trigger: CTCCTGTACCAGTGAGAATCAAATTATTGAGAATTG...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTAAAACCAATTGCTGGTaGTTTGCTAACTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIKTNCW*FANLMP
Trigger: TGGCATCAAGTTAGCAAAGCACCAGCAATTGGTTTT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTCTTCCACTAGCTGAATaGAACAACCTATTGACTCTA +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHILPLAE*NNLLTL
Trigger: TAGAGTCAATAGGTTGTTCCATTCAGCTAGTGGAAG...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAACAGGTCTGTGTCTTGTaGACGAAGATTATTATACAC +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDEQVCVL*TKIIIH
Trigger: GTGTATAATAATCTTCGTCCACAAGACACAGACCTG...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTCAGGTACCATTTCCTTaGTTTACAATCCAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIQVPFP*FTIQVV
Trigger: AACTACCTGGATTGTAAACCAAGGAAATGGTACCTG...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTATACTGCTTTTCGTGTaGTTCATTAGGATTTGGATC +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIILLFV*FIRIWI
Trigger: GATCCAAATCCTAATGAATCACACGAAAAGCAGTAT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR TCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAAAGGTTGTCTAATTGTTaGACTGCCACTTTACGAATT +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDERLSNC*TATLRI
Trigger: AATTCGTAAAGTGGCAGTTCAACAATTAGACAACCT...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTGGATTTGGATCCGTTTaGCAAGAATATGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIGFGSV*QEYAIF
Trigger: AAAAATGGCATATTCTTGGCAAACGGATCCAAATCC...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTGCTTCATTTAATGAATaGCCTGTTGAGTCCCATTTT +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIASFNE*PVESHF
Trigger: AAAATGGGACTCAACAGGGCATTCATTAAATGAAGC...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTGACTCTATATTCTTCTaGCATGTACTTTCCCACATT +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIDSIFF*HVLSHI
Trigger: AATGTGGGAAAGTACATGGCAGAAGAATATAGAGTC...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTACAGGCTGAAAATCTaGATAAAAGCTGTTACAGTA +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHYRLKI*IKAVTV
Trigger: TACTGTAACAGCTTTTATGCAGATTTTCAGCCTGTA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAAGAGTCGGATGTTAATTaGTCCCACAAATACAGTTTT +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDEESDVN*SHKYSF
Trigger: AAAACTGTATTTGTGGGAGCAATTAACATCCGACTC...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR GCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATCAGGTAGTTAGTTTCTaGTTCTCAACAATTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHQVVSF*FSTILN
Trigger: ATTGAGAATTGTTGAGAAGCAGAAACTAACTACCTG...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR GCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTATAGAAATTTTCCTGTaGTTTTCTCTGTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIIEIFL*FSLCQL
Trigger: GAGCTGACACAGAGAAAAGCACAGGAAAATTTCTAT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATACAAAGAGAAATTCTTaGTGTTCATACTGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: SISPSVLIIPLNQINWQHTKRNS*CSYCFS
Trigger: CGAAAAGCAGTATGAACACCAAGAATTTCTCTTTGT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTACTAAAACCAATTGCTaGTGCTTTGCTAACTTGATG +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHITKTNC*CFANLM
Trigger: CATCAAGTTAGCAAAGCACCAGCAATTGGTTTTAGT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTTTAGAATATGATCTTTaGGGAGTAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: ISPSVLIIPLNQINWQHILEYDL*GVAGHL
Trigger: CAAATGACCAGCTACTCCCCAAAGATCATATTCTAA...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAATTAGAATATGATCTTTaGGGAGTAGCTGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDELEYDL*GVAGHL
Trigger: CAAATGACCAGCTACTCCCCAAAGATCATATTCTAA...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CCA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAACAATTTCATTGTAAGTaGGGTCCGTACATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSLKNNADVFAHRISIDEQFHCK*GPYILE
Trigger: TTCCAAAATGTACGGACCCCACTTACAATGAAATTG...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTAGGCTTGTTTCGTTGTaGCTGTGTGTCACCTGGATC +
Preference number: 5 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSRLVSL*LCVTWI
Trigger: GATCCAGGTGACACACAGCAACAACGAAACAAGCCT...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS GCA 90 bp AAGGGGAAAATTGATCCTGTGCACCCAGGTTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCTGAGGTGGGAAGGAAGCCCGGGATT +
Preference number: 5 (lower is better)
Translates to: KGKIDPVHPGFWNVV*CIHCEAEVGRKPGI
Trigger: AATCCCGGGCTTCCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGGGTGCACAGGATCAATTTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433979.6
CDS-3UTR CAA 90 bp CAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACTAAAGGAAGGGAGCAGTAGTAAATTTGCATTGTaGGTTGCACAGGCAATCCCA +
Preference number: 5 (lower is better)
Translates to: QSFHPIQGHYPGLKEGSSSKFAL*VAQAIP
Trigger: TGGGATTGCCTGTGCAACCAACAATGCAAATTTACT...ACTGCTCCCTTCCTTTAGTCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTCCACGCCAGTAAATTaGCATTGTTGGTTGCACAGG +
Preference number: 5 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRSTPVN*HCWLHR
Trigger: CCTGTGCAACCAACAATGCAAATTTACTGGCGTGGA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTCTGTAGTTTCTCACTaGGCACAGCTTCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRSVVSH*AQLLSS
Trigger: GCTGGAAAGAAGCTGTGCCAAGTGAGAAACTACAGA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATAGGATTTGGATCCGTTaGCCAAGAATATGCCATTTT +
Preference number: 5 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHRIWIR*PRICHF
Trigger: AAAATGGCATATTCTTGGCAAACGGATCCAAATCCT...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTTAATGAATGCCCTGTaGAGTCCCATTTTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRLMNAL*SPILVQ
Trigger: CTGCACCAAAATGGGACTCAACAGGGCATTCATTAA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTATGGTGCTTTGCTAACTaGATGCCAGGAGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: DLHPTLLELSFLREAHSVWCFAN*MPGEFT
Trigger: CGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACCA...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGATGGTCACTGGCAGACTaGACTCTTTCCCCAATATCT +
Preference number: 5 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGWSLAD*TLSPIS
Trigger: AGATATTGGGGAAAGAGTCAAGTCTGCCAGTGACCA...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGTCAGGCTTGTTTCGTaGTTGCTGTGTGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQVRLVS*LLCVTW
Trigger: CCAGGTGACACACAGCAACAACGAAACAAGCCTGAC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGATGCACCTTAGGCTTCTaGTCTGGAAACTTCTCACCT +
Preference number: 5 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGCTLGF*SGNFSP
Trigger: AGGTGAGAAGTTTCCAGACAAGAAGCCTAAGGTGCA...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTGGTGCTTTGCTAACTaGATGCCAGGAGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQWCFAN*MPGEFT
Trigger: CGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACCA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGTACTGCATCTGTAATTaGTTTGGTTTCCACACACCC +
Preference number: 5 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRYCICN*FGFHTP
Trigger: GGGTGTGTGGAAACCAAACAAATTACAGATGCAGTA...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAGTACCTCCTGTCTTaGATGGTCACTGGCAGACTT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQYLLS*MVTGRL
Trigger: AAGTCTGCCAGTGACCATCAAAGACAGGAGGTACTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CTGCAGGGTCACCGGGGATGGCTGACTTACATCCCACACTCCTGGAGTTATCATTCTATAAATGATCATTaGCATATCCAAGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LQGHRGWLTYIPHSWSYHSINDH*HIQAFL
Trigger: CAGGAAGGCTTGGATATGCAAATGATCATTTATAGA...ATGATAACTCCAGGAGTGTGGGATGTAAGTCAGCCATCCCCGGTGACCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGTCTGTGAAGTAGATTaGGCAGGGCTTATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQVCEVD*AGLMAD
Trigger: GTCAGCCATAAGCCCTGCCAAATCTACTTCACAGAC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGGCTTGTTTCGTTGTaGCTGTGTGTCACCTGGATC +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRLVSL*LCVTWI
Trigger: GATCCAGGTGACACACAGCAACAACGAAACAAGCCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGTCAGGCTTGTTTCGTaGTTGCTGTGTGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKVRLVS*LLCVTW
Trigger: CCAGGTGACACACAGCAACAACGAAACAAGCCTGAC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGATTTTTCTGTCAGGCTaGTTTCGTTGTTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRIFLSG*FRCCCV
Trigger: CACACAGCAACAACGAAACAAGCCTGACAGAAAAAT...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS GCA 90 bp ATAGGCTGCAAAGTTTATAATCAGGGTCAGAGCCCTTTTCCTGTGTaGAGACAGCTTCCTTCTTGCTGTGTCCTAACCTTTCGAGATAGC +
Preference number: 5 (lower is better)
Translates to: IGCKVYNQGQSPFPV*RQLPSCCVLTFRDS
Trigger: GCTATCTCGAAAGGTTAGGACACAGCAAGAAGGAAGCTGTCTGCACACAGGAAAAGGGCTCTGACCCTGATTATAAACTTTGCAGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536967.2
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTGGTGCTTTGCTAACTaGATGCCAGGAGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKWCFAN*MPGEFT
Trigger: CGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACCA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAGGTTTCTGGAATGTaGTGTGCTGCATACACTGTG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQVSGM*CAAYTV
Trigger: CACAGTGTATGCAGCACACAACATTCCAGAAACCTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCCACGCCAGTAAATTaGCATTGTTGGTTGCACAGG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSTPVN*HCWLHR
Trigger: CCTGTGCAACCAACAATGCAAATTTACTGGCGTGGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTGGTCACTGGCAGACTaGACTCTTTCCCCAATATCT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQWSLAD*TLSPIS
Trigger: AGATATTGGGGAAAGAGTCAAGTCTGCCAGTGACCA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAGTACCTCCTGTCTTaGATGGTCACTGGCAGACTT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQYLLS*MVTGRL
Trigger: AAGTCTGCCAGTGACCATCAAAGACAGGAGGTACTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCCAGTACCTCCTGTCTTaGATGGTCACTGGCAGACTT +
Preference number: 5 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFQYLLS*MVTGRL
Trigger: AAGTCTGCCAGTGACCATCAAAGACAGGAGGTACTG...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAATGGCGATGAATCTTaGCTAGGGTCACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQNGDES*LGSQHQ
Trigger: CTGATGCTGTGACCCTAGCAAAGATTCATCGCCATT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGTCTGTGAAGTAGATTaGGCAGGGCTTATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKVCEVD*AGLMAD
Trigger: GTCAGCCATAAGCCCTGCCAAATCTACTTCACAGAC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGGCTTGTTTCGTTGTaGCTGTGTGTCACCTGGATC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRLVSL*LCVTWI
Trigger: GATCCAGGTGACACACAGCAACAACGAAACAAGCCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTGCACCTTAGGCTTCTaGTCTGGAAACTTCTCACCT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQCTLGF*SGNFSP
Trigger: AGGTGAGAAGTTTCCAGACAAGAAGCCTAAGGTGCA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAAAACCCAGACTGACTaGGCTAGAAGAATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKKTQTD*ARRMGL
Trigger: CAACCCCATTCTTCTAGCCAAGTCAGTCTGGGTTTT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTAATGAATGCCCTGTaGAGTCCCATTTTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLMNAL*SPILVQ
Trigger: CTGCACCAAAATGGGACTCAACAGGGCATTCATTAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGACAGATCTTCCCAGAATaGAAATTAACATCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGQIFPE*KLTSAA
Trigger: TGCAGCTGATGTTAATTTCAATTCTGGGAAGATCTG...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAGGTTTCTGGAATGTaGTGTGCTGCATACACTGTG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQVSGM*CAAYTV
Trigger: CACAGTGTATGCAGCACACAACATTCCAGAAACCTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCCAGGTTTCTGGAATGTaGTGTGCTGCATACACTGTG +
Preference number: 5 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFQVSGM*CAAYTV
Trigger: CACAGTGTATGCAGCACACAACATTCCAGAAACCTG...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGCCAGTAAATTTGCATaGTTGGTTGCACAGGCAATC +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQASKFA*LVAQAI
Trigger: GATTGCCTGTGCAACCAACAATGCAAATTTACTGGC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GCATACAGCATCATTTCCAGCAGGTTCAAGAGCAGTTGGCTGTGCTTTCTGATAGCCAGTAAATTTGCATaGTTGGTTGCACAGGCAATC +
Preference number: 5 (lower is better)
Translates to: AYSIISSRFKSSWLCFLIASKFA*LVAQAI
Trigger: GATTGCCTGTGCAACCAACAATGCAAATTTACTGGC...TATCAGAAAGCACAGCCAACTGCTCTTGAACCTGCTGGAAATGATGCTGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCCACGCCAGTAAATTaGCATTGTTGGTTGCACAGG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSTPVN*HCWLHR
Trigger: CCTGTGCAACCAACAATGCAAATTTACTGGCGTGGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTGGTCACTGGCAGACTaGACTCTTTCCCCAATATCT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKWSLAD*TLSPIS
Trigger: AGATATTGGGGAAAGAGTCAAGTCTGCCAGTGACCA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TGGTATGCATTTCTGAAACAGTCCTTTCATCCCATCCAGGGGCACTACCCAGGAATAATGCTGATGTTTTaGCCCATCGGATTAGCATTG +
Preference number: 5 (lower is better)
Translates to: WYAFLKQSFHPIQGHYPGIMLMF*PIGLAL
Trigger: CAATGCTAATCCGATGGGCAAAAACATCAGCATTAT...TCCTGGGTAGTGCCCCTGGATGGGATGAAAGGACTGTTTCAGAAATGCATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCAGGTTTCTGGAATGTTGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGAATATTGTCCATCACTaGAATAAGCTGCAGAACAAG +
Preference number: 5 (lower is better)
Translates to: PGFWNVVCCIHCEAEVGRNIVHH*NKLQNK
Trigger: CTTGTTCTGCAGCTTATTCAAGTGATGGACAATATT...CCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAATGGCGATGAATCTTaGCTAGGGTCACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKNGDES*LGSQHQ
Trigger: CTGATGCTGTGACCCTAGCAAAGATTCATCGCCATT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAGGTTCAAGAGCAGTaGGCTGTGCTTTCTGATAAT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQVQEQ*AVLSDN
Trigger: ATTATCAGAAAGCACAGCCAACTGCTCTTGAACCTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTCTTCAACTGTTTGTaGCACAGCCTCAGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQFFNCL*HSLREE
Trigger: TTCCTCTCTGAGGCTGTGCAACAAACAGTTGAAGAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTGCACCTTAGGCTTCTaGTCTGGAAACTTCTCACCT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKCTLGF*SGNFSP
Trigger: AGGTGAGAAGTTTCCAGACAAGAAGCCTAAGGTGCA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTACCCTGTGCTGTCTTaGACAACAAAGATGCCTTAC +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQYPVLS*TTKMPY
Trigger: GTAAGGCATCTTTGTTGTCAAAGACAGCACAGGGTA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCTGTAGTTTCTCACTaGGCACAGCTTCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSVVSH*AQLLSS
Trigger: GCTGGAAAGAAGCTGTGCCAAGTGAGAAACTACAGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTAATGAATGCCCTGTaGAGTCCCATTTTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLMNAL*SPILVQ
Trigger: CTGCACCAAAATGGGACTCAACAGGGCATTCATTAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGCATCTGTAATTTGTTaGGTTTCCACACACCCTAGA +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQASVIC*VSTHPR
Trigger: TCTAGGGTGTGTGGAAACCAAACAAATTACAGATGC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTACTGCATCTGTAATTaGTTTGGTTTCCACACACCC +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQYCICN*FGFHTP
Trigger: GGGTGTGTGGAAACCAAACAAATTACAGATGCAGTA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTATCTCTATCAAGCCTTTaGCTGAAGTCTCTGAACTTT +
Preference number: 5 (lower is better)
Translates to: DLHPTLLELSFLREAHSVSLSSL*LKSLNF
Trigger: AAAGTTCAGAGACTTCAGCAAAAGGCTTGATAGAGA...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTAATGTGGATAGTTCAGTaGTTACCTTCTCTATCAAGC +
Preference number: 5 (lower is better)
Translates to: DLHPTLLELSFLREAHSVMWIVQ*LPSLSS
Trigger: GCTTGATAGAGAAGGTAACAACTGAACTATCCACAT...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATTTCAAGGGGAAAATaGATCCTGTGCACCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKISRGK*ILCTQV
Trigger: AACCTGGGTGCACAGGATCAATTTTCCCCTTGAAAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433979.6
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAATTTGCATTGTTGGTaGCACAGGCAATCCCAAACA +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQNLHCW*HRQSQT
Trigger: TGTTTGGGATTGCCTGTGCAACCAACAATGCAAATT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGTAAATTTGCATTGTaGGTTGCACAGGCAATCCCA +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSKFAL*VAQAIP
Trigger: TGGGATTGCCTGTGCAACCAACAATGCAAATTTACT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGCCAGTAAATTTGCATaGTTGGTTGCACAGGCAATC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKASKFA*LVAQAI
Trigger: GATTGCCTGTGCAACCAACAATGCAAATTTACTGGC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAGGTTCAAGAGCAGTaGGCTGTGCTTTCTGATAAT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQVQEQ*AVLSDN
Trigger: ATTATCAGAAAGCACAGCCAACTGCTCTTGAACCTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GACTTACATCCCACACTCCTGGAGTTATCATTTCTACGGGAGGCTCACTCTGTATTCCAGGTCTGTGTCTaGTGGACGAAGATTATTATA +
Preference number: 5 (lower is better)
Translates to: DLHPTLLELSFLREAHSVFQVCV*WTKIII
Trigger: TATAATAATCTTCGTCCACAAGACACAGACCTGGAA...TACAGAGTGAGCCTCCCGTAGAAATGATAACTCCAGGAGTGTGGGATGTAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCGTCTGTGAAGTAGATTaGGCAGGGCTTATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: GVCFCESLAICFIHSFSGVCEVD*AGLMAD
Trigger: GTCAGCCATAAGCCCTGCCAAATCTACTTCACAGAC...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATTTTTCTGTCAGGCTaGTTTCGTTGTTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQIFLSG*FRCCCV
Trigger: CACACAGCAACAACGAAACAAGCCTGACAGAAAAAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTCTTCAACTGTTTGTaGCACAGCCTCAGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKFFNCL*HSLREE
Trigger: TTCCTCTCTGAGGCTGTGCAACAAACAGTTGAAGAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTACCCTGTGCTGTCTTaGACAACAAAGATGCCTTAC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKYPVLS*TTKMPY
Trigger: GTAAGGCATCTTTGTTGTCAAAGACAGCACAGGGTA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATGAGCAGCCTGTAAAGTaGAGGGGCAGACACAGAGAA +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHEQPVK*RGRHRE
Trigger: TTCTCTGTGTCTGCCCCTCAACTTTACAGGCTGCTC...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS CCA 90 bp GCTCCATTCTCAGGTACCGTTGGCAGTTTTCAGGTACCATTTCCTTaGTTTACAATCCAGGTAGTTAGTTTCTGCTTCTCAACAATTCTC +
Preference number: 5 (lower is better)
Translates to: APFSGTVGSFQVPFP*FTIQVVSFCFSTIL
Trigger: GAGAATTGTTGAGAAGCAGAAACTAACTACCTGGATTGTAAACCAAGGAAATGGTACCTGAAAACTGCCAACGGTACCTGAGAATGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGGATTTGGATCCGTTaGCCAAGAATATGCCATTTT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRIWIR*PRICHF
Trigger: AAAATGGCATATTCTTGGCAAACGGATCCAAATCCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGAATGGAACAACCTATaGACTCTATATTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQEWNNL*TLYSSA
Trigger: GGCAGAAGAATATAGAGTCAATAGGTTGTTCCATTC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCAGATCTTCCCAGAATaGAAATTAACATCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQQIFPE*KLTSAA
Trigger: TGCAGCTGATGTTAATTTCAATTCTGGGAAGATCTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGGAGTAGCTGGTCATTaGTGCAAAAATGCAGAATTT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQGVAGH*CKNAEF
Trigger: AAATTCTGCATTTTTGCACAAATGACCAGCTACTCC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGCATCTGTAATTTGTTaGGTTTCCACACACCCTAGA +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKASVIC*VSTHPR
Trigger: TCTAGGGTGTGTGGAAACCAAACAAATTACAGATGC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTACTGCATCTGTAATTaGTTTGGTTTCCACACACCC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKYCICN*FGFHTP
Trigger: GGGTGTGTGGAAACCAAACAAATTACAGATGCAGTA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCTCTATCAAGCCTTTaGCTGAAGTCTCTGAACTTT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSLSSL*LKSLNF
Trigger: AAAGTTCAGAGACTTCAGCAAAAGGCTTGATAGAGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATGTGGATAGTTCAGTaGTTACCTTCTCTATCAAGC +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQMWIVQ*LPSLSS
Trigger: GCTTGATAGAGAAGGTAACAACTGAACTATCCACAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATAATGCTGATGTTTTaGCCCATCGGATTAGCATTG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQIMLMF*PIGLAL
Trigger: CAATGCTAATCCGATGGGCAAAAACATCAGCATTAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAAATGGCGATGAATCTTaGCTAGGGTCACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSNGDES*LGSQHQ
Trigger: CTGATGCTGTGACCCTAGCAAAGATTCATCGCCATT...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAAGTCAGGCTTGTTTCGTaGTTGCTGTGTGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: SSLKNNADVFAHRISIDEVRLVS*LLCVTW
Trigger: CCAGGTGACACACAGCAACAACGAAACAAGCCTGAC...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATTTTTCTGTCAGGCTaGTTTCGTTGTTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKIFLSG*FRCCCV
Trigger: CACACAGCAACAACGAAACAAGCCTGACAGAAAAAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS TCA 90 bp GGTAACACAGAAGGACTAAAACCAATTGCTGGTGCTTTGCTAACTTaGTGCCAGGAGAGTTCACGGCTTTTAGAAGTGAATTCATTCAAG +
Preference number: 5 (lower is better)
Translates to: GNTEGLKPIAGALLT*CQESSRLLEVNSFK
Trigger: CTTGAATGAATTCACTTCTAAAAGCCGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACCAGCAATTGGTTTTAGTCCTTCTGTGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS TCA 90 bp ACAACCTCTATATTCTTCTGCCATGTACTTTCCCACATTCCGGGTTaGAGAGAGCCTTTCAAAAGCATCAAAGATGGTTCCACAATGTTC +
Preference number: 5 (lower is better)
Translates to: TTSIFFCHVLSHIPG*REPFKSIKDGSTMF
Trigger: GAACATTGTGGAACCATCTTTGATGCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGAAAGTACATGGCAGAAGAATATAGAGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGGATTTGGATCCGTTaGCCAAGAATATGCCATTTT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRIWIR*PRICHF
Trigger: AAAATGGCATATTCTTGGCAAACGGATCCAAATCCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTTGGTGCTTTGCTAACTaGATGCCAGGAGAGTTCACG +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIWCFAN*MPGEFT
Trigger: CGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACCA...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAGAAGGATGAATTTGTaGGAGGAATGCTACTTTCAA +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQRRMNL*EECYFQ
Trigger: TTGAAAGTAGCATTCCTCCAACAAATTCATCCTTCT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTTGAGAAGGATGAATTaGTTGGAGGAATGCTACTTT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQLRRMN*LEECYF
Trigger: AAAGTAGCATTCCTCCAACAAATTCATCCTTCTCAA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGAATGGAACAACCTATaGACTCTATATTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKEWNNL*TLYSSA
Trigger: GGCAGAAGAATATAGAGTCAATAGGTTGTTCCATTC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCAGATCTTCCCAGAATaGAAATTAACATCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKQIFPE*KLTSAA
Trigger: TGCAGCTGATGTTAATTTCAATTCTGGGAAGATCTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGGAGTAGCTGGTCATTaGTGCAAAAATGCAGAATTT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKGVAGH*CKNAEF
Trigger: AAATTCTGCATTTTTGCACAAATGACCAGCTACTCC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCTCTATCAAGCCTTTaGCTGAAGTCTCTGAACTTT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSLSSL*LKSLNF
Trigger: AAAGTTCAGAGACTTCAGCAAAAGGCTTGATAGAGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATGTGGATAGTTCAGTaGTTACCTTCTCTATCAAGC +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKMWIVQ*LPSLSS
Trigger: GCTTGATAGAGAAGGTAACAACTGAACTATCCACAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCACTTTACGAATTTCTaGATCTGGAAAACTGGAAGT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQHFTNF*IWKTGS
Trigger: ACTTCCAGTTTTCCAGATCAAGAAATTCGTAAAGTG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATAAGTTTCTGCTCCTaGGAAAACTCATCATTCAAG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQISFCS*ENSSFK
Trigger: CTTGAATGATGAGTTTTCCAAGGAGCAGAAACTTAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGATATCTCCCAGAATTTaGATAAGTTTCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQISPRI*ISFCSL
Trigger: CAAGGAGCAGAAACTTATCAAAATTCTGGGAGATAT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGCCCATCGGATTAGCATaGATGAAAGTAATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQPIGLA*MKVIFN
Trigger: ATTGAAGATTACTTTCATCAATGCTAATCCGATGGG...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATAATGCTGATGTTTTaGCCCATCGGATTAGCATTG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKIMLMF*PIGLAL
Trigger: CAATGCTAATCCGATGGGCAAAAACATCAGCATTAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAATATTGTCCATCACTaGAATAAGCTGCAGAACAAG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQNIVHH*NKLQNK
Trigger: CTTGTTCTGCAGCTTATTCAAGTGATGGACAATATT...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGTCTATAAATGATCATTaGCATATCCAAGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQSINDH*HIQAFL
Trigger: CAGGAAGGCTTGGATATGCAAATGATCATTTATAGA...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAACAGGTTCAAGAGCAGTaGGCTGTGCTTTCTGATAAT +
Preference number: 5 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKQVQEQ*AVLSDN
Trigger: ATTATCAGAAAGCACAGCCAACTGCTCTTGAACCTG...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTCCAGGTCTGTGTCTaGTGGACGAAGATTATTATA +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKFQVCV*WTKIII
Trigger: TATAATAATCTTCGTCCACAAGACACAGACCTGGAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CCTGTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGGTTGGCTGTGAAGTTTaGAAAACTGCTCAAATGATT +
Preference number: 5 (lower is better)
Translates to: PVLSLTTKMPYLCDSEAQVGCEV*KTAQMI
Trigger: AATCATTTGAGCAGTTTTCAAAACTTCACAGCCAAC...CTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATTCTTCAACTGTTTGTaGCACAGCCTCAGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKFFNCL*HSLREE
Trigger: TTCCTCTCTGAGGCTGTGCAACAAACAGTTGAAGAA...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATCATTCTCAGGTACCGTaGGCAGTTTTCAGGTACCAT +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHHSQVP*AVFRYH
Trigger: ATGGTACCTGAAAACTGCCAACGGTACCTGAGAATG...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAAGATAGAAATTTTCTaGAAGAGGGCTTCCTCACGA +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKKIEIF*KRASSR
Trigger: TCGTGAGGAAGCCCTCTTCAAGAAAATTTCTATCTT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675017.1
CDS TCA 90 bp ATTGACTCTATATTCTTCTGCCATGTACTTTCCCACATTCCGGGTTaGAGAGAGCCTTTCAAAAGCATCAAAGATGGTTCCACAATGTTC +
Preference number: 5 (lower is better)
Translates to: IDSIFFCHVLSHIPG*REPFKSIKDGSTMF
Trigger: GAACATTGTGGAACCATCTTTGATGCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGAAAGTACATGGCAGAAGAATATAGAGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTTAATGAATGCCCTGTaGAGTCCCATTTTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHLMNAL*SPILVQ
Trigger: CTGCACCAAAATGGGACTCAACAGGGCATTCATTAA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAGAAGGATGAATTTGTaGGAGGAATGCTACTTTCAA +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKRRMNL*EECYFQ
Trigger: TTGAAAGTAGCATTCCTCCAACAAATTCATCCTTCT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTTGAGAAGGATGAATTaGTTGGAGGAATGCTACTTT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKLRRMN*LEECYF
Trigger: AAAGTAGCATTCCTCCAACAAATTCATCCTTCTCAA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAATCAGCATCTGTAATTTGTTaGGTTTCCACACACCCTAGA +
Preference number: 5 (lower is better)
Translates to: LFSSESGFIYSHPVAGKSASVIC*VSTHPR
Trigger: TCTAGGGTGTGTGGAAACCAAACAAATTACAGATGC...TGATTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTCAGGTTTCTGGAATGTaGTGTGCTGCATACACTGTG +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIQVSGM*CAAYTV
Trigger: CACAGTGTATGCAGCACACAACATTCCAGAAACCTG...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAAATTTGCATTGTTGGTaGCACAGGCAATCCCAAACA +
Preference number: 5 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKNLHCW*HRQSQT
Trigger: TGTTTGGGATTGCCTGTGCAACCAACAATGCAAATT...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCACTTTACGAATTTCTaGATCTGGAAAACTGGAAGT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKHFTNF*IWKTGS
Trigger: ACTTCCAGTTTTCCAGATCAAGAAATTCGTAAAGTG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCATAAGTTTCTGCTCCTaGGAAAACTCATCATTCAAG +
Preference number: 5 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFISFCS*ENSSFK
Trigger: CTTGAATGATGAGTTTTCCAAGGAGCAGAAACTTAT...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATAAGTTTCTGCTCCTaGGAAAACTCATCATTCAAG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKISFCS*ENSSFK
Trigger: CTTGAATGATGAGTTTTCCAAGGAGCAGAAACTTAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGATATCTCCCAGAATTTaGATAAGTTTCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKISPRI*ISFCSL
Trigger: CAAGGAGCAGAAACTTATCAAAATTCTGGGAGATAT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp TGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGTGAGCATGGATTCATATCTCCCAGAATTTaGATAAGTTTCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CIVGCTGNPKQFYSEHGFISPRI*ISFCSL
Trigger: CAAGGAGCAGAAACTTATCAAAATTCTGGGAGATAT...GAATCCATGCTCACTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGCCCATCGGATTAGCATaGATGAAAGTAATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKPIGLA*MKVIFN
Trigger: ATTGAAGATTACTTTCATCAATGCTAATCCGATGGG...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGAATATTGTCCATCACTaGAATAAGCTGCAGAACAAG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKNIVHH*NKLQNK
Trigger: CTTGTTCTGCAGCTTATTCAAGTGATGGACAATATT...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGTCTATAAATGATCATTaGCATATCCAAGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKSINDH*HIQAFL
Trigger: CAGGAAGGCTTGGATATGCAAATGATCATTTATAGA...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp GTGCTGTCTTTGACAACAAAGATGCCTTACTTATGTGATTCAGAGGCCCAGAAGGTTGGCTGTGAAGTTTaGAAAACTGCTCAAATGATT +
Preference number: 5 (lower is better)
Translates to: VLSLTTKMPYLCDSEAQKVGCEV*KTAQMI
Trigger: AATCATTTGAGCAGTTTTCAAAACTTCACAGCCAAC...CTTCTGGGCCTCTGAATCACATAAGTAAGGCATCTTTGTTGTCAAAGACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433979.6
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTTCTGTAGTTTCTCACTaGGCACAGCTTCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHISVVSH*AQLLSS
Trigger: GCTGGAAAGAAGCTGTGCCAAGTGAGAAACTACAGA...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS TCA 90 bp CCACAATGTTCACATGTCCACTCCTTTTATTCTCTTCTTTCGGCATaGAGTCACTTGAGAAGGATGAATTTGTTGGAGGAATGCTACTTT +
Preference number: 5 (lower is better)
Translates to: PQCSHVHSFYSLLSA*SHLRRMNLLEECYF
Trigger: AAAGTAGCATTCCTCCAACAAATTCATCCTTCTCAAGTGACTTCATGCCGAAAGAAGAGAATAAAAGGAGTGGACATGTGAACATTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS CCA 90 bp CAGGAGAGTTCACGGCTTTTAGAAGTGAATTCATTCAAGGATATTTaGTGTGCTTCATTTAATGAATGCCCTGTTGAGTCCCATTTTGGT +
Preference number: 5 (lower is better)
Translates to: QESSRLLEVNSFKDI*CASFNECPVESHFG
Trigger: ACCAAAATGGGACTCAACAGGGCATTCATTAAATGAAGCACACCAAATATCCTTGAATGAATTCACTTCTAAAAGCCGTGAACTCTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS-3UTR CAA 90 bp CTTCTATTCTCTTCAGAATCAGGTTTCATATACTCCCACCCAGTAGCTGGAAAAGGAGTAGCTGGTCATTaGTGCAAAAATGCAGAATTT +
Preference number: 5 (lower is better)
Translates to: LLFSSESGFIYSHPVAGKGVAGH*CKNAEF
Trigger: AAATTCTGCATTTTTGCACAAATGACCAGCTACTCC...TTTTCCAGCTACTGGGTGGGAGTATATGAAACCTGATTCTGAAGAGAATAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTACTGCATCTGTAATTaGTTTGGTTTCCACACACCC +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHYCICN*FGFHTP
Trigger: GGGTGTGTGGAAACCAAACAAATTACAGATGCAGTA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGCCCATCGGATTAGCATaGATGAAAGTAATCTTCAAT +
Preference number: 5 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQPIGLA*MKVIFN
Trigger: ATTGAAGATTACTTTCATCAATGCTAATCCGATGGG...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp ACGCCAGTAAATTTGCATTGTTGGTTGCACAGGCAATCCCAAACAGTTTTACAGGTTGGCTGTGAAGTTTaGAAAACTGCTCAAATGATT +
Preference number: 5 (lower is better)
Translates to: TPVNLHCWLHRQSQTVLQVGCEV*KTAQMI
Trigger: AATCATTTGAGCAGTTTTCAAAACTTCACAGCCAAC...CTGTAAAACTGTTTGGGATTGCCTGTGCAACCAACAATGCAAATTTACTGGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTCAGGTACCATTTCCTaGGTTTACAATCCAGGTAGT +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHSGTIS*VYNPGS
Trigger: ACTACCTGGATTGTAAACCAAGGAAATGGTACCTGA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp GGAGTCTGTTTCTGTGAAAGTCTGGCAATATGTTTTATACACTCCTTTAGTGGCTTGAGAAGGATGAATTaGTTGGAGGAATGCTACTTT +
Preference number: 5 (lower is better)
Translates to: GVCFCESLAICFIHSFSGLRRMN*LEECYF
Trigger: AAAGTAGCATTCCTCCAACAAATTCATCCTTCTCAA...GCCACTAAAGGAGTGTATAAAACATATTGCCAGACTTTCACAGAAACAGACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATGAATGGAACAACCTATaGACTCTATATTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHEWNNL*TLYSSA
Trigger: GGCAGAAGAATATAGAGTCAATAGGTTGTTCCATTC...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATCAGATCTTCCCAGAATaGAAATTAACATCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHQIFPE*KLTSAA
Trigger: TGCAGCTGATGTTAATTTCAATTCTGGGAAGATCTG...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTGCATCTGTAATTTGTTaGGTTTCCACACACCCTAGA +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIASVIC*VSTHPR
Trigger: TCTAGGGTGTGTGGAAACCAAACAAATTACAGATGC...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATGTGGATAGTTCAGTaGTTACCTTCTCTATCAAGC +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHMWIVQ*LPSLSS
Trigger: GCTTGATAGAGAAGGTAACAACTGAACTATCCACAT...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATCATCTTCCCTTCCTTTaGTCAGGCATATGTACAATA +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHHLPFL*SGICTI
Trigger: TATTGTACATATGCCTGACAAAAGGAAGGGAAGATG...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTAGGATTTGGATCCGTTaGCCAAGAATATGCCATTTT +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIRIWIR*PRICHF
Trigger: AAAATGGCATATTCTTGGCAAACGGATCCAAATCCT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp TCTATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATTTGAGAAGGATGAATTaGTTGGAGGAATGCTACTTT +
Preference number: 5 (lower is better)
Translates to: SISPSVLIIPLNQINWQHLRRMN*LEECYF
Trigger: AAAGTAGCATTCCTCCAACAAATTCATCCTTCTCAA...ATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTGGAGTAGCTGGTCATTaGTGCAAAAATGCAGAATTT +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIGVAGH*CKNAEF
Trigger: AAATTCTGCATTTTTGCACAAATGACCAGCTACTCC...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTTCTCTATCAAGCCTTTaGCTGAAGTCTCTGAACTTT +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHISLSSL*LKSLNF
Trigger: AAAGTTCAGAGACTTCAGCAAAAGGCTTGATAGAGA...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTAACTGGAAAGTCCATTaGCATTGTAAGATTAGGGTG +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHINWKVH*HCKIRV
Trigger: CACCCTAATCTTACAATGCAAATGGACTTTCCAGTT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS GCA 90 bp TTTCAGGTACCATTTCCTTGGTTTACAATCCAGGTAGTTAGTTTCTaGTTCTCAACAATTCTCAATAATTTGATTCTCACTGGTACAGGA +
Preference number: 5 (lower is better)
Translates to: FQVPFPWFTIQVVSF*FSTILNNLILTGTG
Trigger: TCCTGTACCAGTGAGAATCAAATTATTGAGAATTGTTGAGAAGCAGAAACTAACTACCTGGATTGTAAACCAAGGAAATGGTACCTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp ATTAGCCCTAGTGTACTTATCATACCACTGAATCAAATCAACTGGCAGCATATTAGAAGGATGAATTTGTaGGAGGAATGCTACTTTCAA +
Preference number: 5 (lower is better)
Translates to: ISPSVLIIPLNQINWQHIRRMNL*EECYFQ
Trigger: TTGAAAGTAGCATTCCTCCAACAAATTCATCCTTCT...AATATGCTGCCAGTTGATTTGATTCAGTGGTATGATAAGTACACTAGGGCTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS-3UTR CAA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAAAGAAGGATGAATTTGTaGGAGGAATGCTACTTTCAA +
Preference number: 5 (lower is better)
Translates to: SSLKNNADVFAHRISIDERRMNL*EECYFQ
Trigger: TTGAAAGTAGCATTCCTCCAACAAATTCATCCTTCT...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS-3UTR CAA 90 bp TCCAGCCTTAAAAATAATGCTGATGTTTTTGCCCATCGGATTAGCATTGATGAACACTTTACGAATTTCTaGATCTGGAAAACTGGAAGT +
Preference number: 5 (lower is better)
Translates to: SSLKNNADVFAHRISIDEHFTNF*IWKTGS
Trigger: ACTTCCAGTTTTCCAGATCAAGAAATTCGTAAAGTG...TTCATCAATGCTAATCCGATGGGCAAAAACATCAGCATTATTTTTAAGGCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS CAA 90 bp ATTTCAAGGGGAAAATTGATCCTGTGCACCCAGGTTTCTGGAATGTaGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAAGGAAGCCCG +
Preference number: 6 (lower is better)
Translates to: ISRGKLILCTQVSGM*CAAYTVKLRWEGSP
Trigger: CGGGCTTCCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGGGTGCACAGGATCAATTTTCCCCTTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433979.6
CDS GCA 72 bp ATTGATCCTGTGCACCCAGGTTTCTGGAATGTTGTGTaGTGCATACACTGTGAAGCTGAGGTGGGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: IDPVHPGFWNVV*CIHCEAEVGRK
Trigger: CTTCCTTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGGGTGCACAGGATCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433979.6
CDS CAA 72 bp GGAAAATTGATCCTGTGCACCCAGGTTTCTGGAATGTaGTGTGCTGCATACACTGTGAAGCTGAGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: GKLILCTQVSGM*CAAYTVKLRWE
Trigger: TTCCCACCTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGGGTGCACAGGATCAATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433979.6
CDS CCA 72 bp TTCAAGGGGAAAATTGATCCTGTGCACCCAGGTTTCTaGAATGTTGTGTGCTGCATACACTGTGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: FKGKIDPVHPGF*NVVCCIHCEAE
Trigger: CTCAGCTTCACAGTGTATGCAGCACACAACATTCCAGAAACCTGGGTGCACAGGATCAATTTTCCCCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433979.6
CDS GCA 72 bp AAAGTTTATAATCAGGGTCAGAGCCCTTTTCCTGTGTaGAGACAGCTTCCTTCTTGCTGTGTCCTAACCTTT +
Preference number: 6 (lower is better)
Translates to: KVYNQGQSPFPV*RQLPSCCVLTF
Trigger: AAAGGTTAGGACACAGCAAGAAGGAAGCTGTCTGCACACAGGAAAAGGGCTCTGACCCTGATTATAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536967.2
CDS TCA 72 bp GAAGGACTAAAACCAATTGCTGGTGCTTTGCTAACTTaGTGCCAGGAGAGTTCACGGCTTTTAGAAGTGAAT +
Preference number: 6 (lower is better)
Translates to: EGLKPIAGALLT*CQESSRLLEVN
Trigger: ATTCACTTCTAAAAGCCGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACCAGCAATTGGTTTTAGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS TCA 72 bp ATATTCTTCTGCCATGTACTTTCCCACATTCCGGGTTaGAGAGAGCCTTTCAAAAGCATCAAAGATGGTTCC +
Preference number: 6 (lower is better)
Translates to: IFFCHVLSHIPG*REPFKSIKDGS
Trigger: GGAACCATCTTTGATGCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGAAAGTACATGGCAGAAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS GCA 72 bp TTACTTTGTTGCAAAAAGAGGCCAGACTCGTATTGCTaGTTTGAGGTACTTCCACTAGCTGAATGGAACAAC +
Preference number: 6 (lower is better)
Translates to: LLCCKKRPDSYC*FEVLPLAEWNN
Trigger: GTTGTTCCATTCAGCTAGTGGAAGTACCTCAAAGCAGCAATACGAGTCTGGCCTCTTTTTGCAACAAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000536967.2
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS CCA 72 bp TCAGGTACCGTTGGCAGTTTTCAGGTACCATTTCCTTaGTTTACAATCCAGGTAGTTAGTTTCTGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SGTVGSFQVPFP*FTIQVVSFCFS
Trigger: TGAGAAGCAGAAACTAACTACCTGGATTGTAAACCAAGGAAATGGTACCTGAAAACTGCCAACGGTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS CAA 72 bp AGAAGGACTAAAACCAATTGCTGGTGCTTTGCTAACTaGATGCCAGGAGAGTTCACGGCTTTTAGAAGTGAA +
Preference number: 6 (lower is better)
Translates to: RRTKTNCWCFAN*MPGEFTAFRSE
Trigger: TTCACTTCTAAAAGCCGTGAACTCTCCTGGCATCAAGTTAGCAAAGCACCAGCAATTGGTTTTAGTCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS GCA 72 bp TTTTTACTTTGTTGCAAAAAGAGGCCAGACTCGTATTaGTGCTTTGAGGTACTTCCACTAGCTGAATGGAAC +
Preference number: 6 (lower is better)
Translates to: FLLCCKKRPDSY*CFEVLPLAEWN
Trigger: GTTCCATTCAGCTAGTGGAAGTACCTCAAAGCAGCAATACGAGTCTGGCCTCTTTTTGCAACAAAGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000536967.2
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS CCA 72 bp TCGTATTGCTGCTTTGAGGTACTTCCACTAGCTGAATaGAACAACCTATTGACTCTATATTCTTCTGCCATG +
Preference number: 6 (lower is better)
Translates to: SYCCFEVLPLAE*NNLLTLYSSAM
Trigger: CATGGCAGAAGAATATAGAGTCAATAGGTTGTTCCATTCAGCTAGTGGAAGTACCTCAAAGCAGCAATACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000536967.2
ENST00000538779.6
ENST00000675017.1
ENST00000676171.1
CDS CAA 90 bp AACAACCTCTATATTCTTCTGCCATGTACTTTCCCACATTCCGGGTaGAAGAGAGCCTTTCAAAAGCATCAAAGATGGTTCCACAATGTT +
Preference number: 6 (lower is better)
Translates to: NNLYILLPCTFPHSG*KRAFQKHQRWFHNV
Trigger: AACATTGTGGAACCATCTTTGATGCTTTTGAAAGGCTCTCTTCAACCCGGAATGTGGGAAAGTACATGGCAGAAGAATATAGAGGTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546003.5
CDS CAA 90 bp TTTGCCACTGATCTCATCTACTATCTGATCAAAACCCAGACTGACTaGGCTAGAAGAATGGGGTTGATTTACAAAGAGAAATTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: FATDLIYYLIKTQTD*ARRMGLIYKEKFLV
Trigger: CACCAAGAATTTCTCTTTGTAAATCAACCCCATTCTTCTAGCCAAGTCAGTCTGGGTTTTGATCAGATAGTAGATGAGATCAGTGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS CAA 72 bp ATCAAAACCCAGACTGACTTGGCTAGAAGAATGGGGTaGATTTACAAAGAGAAATTCTTGGTGTTCATACTG +
Preference number: 6 (lower is better)
Translates to: IKTQTDLARRMG*IYKEKFLVFIL
Trigger: CAGTATGAACACCAAGAATTTCTCTTTGTAAATCAACCCCATTCTTCTAGCCAAGTCAGTCTGGGTTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000433979.6
ENST00000535651.5
ENST00000538779.6
ENST00000546003.5
ENST00000675017.1
ENST00000676171.1
CDS TCA 72 bp AGGCATATGTACAATAAGAAGCAGACAAGATGGTGCTaGTCAACTGGAAAGTCCATTTGCATTGTAAGATTA +
Preference number: 6 (lower is better)
Translates to: RHMYNKKQTRWC*STGKSICIVRL
Trigger: TAATCTTACAATGCAAATGGACTTTCCAGTTGATCAGCACCATCTTGTCTGCTTCTTATTGTACATATGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS CCA 72 bp GTTAAGAATAAATTACTTAGGCAGATAGTAAGGGTATaGGAGTCCTCGGTAAGGCTTTCCTTTTTAATGAAA +
Preference number: 6 (lower is better)
Translates to: VKNKLLRQIVRV*ESSVRLSFLMK
Trigger: TTTCATTAAAAAGGAAAGCCTTACCGAGGACTCCCATACCCTTACTATCTGCCTAAGTAATTTATTCTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535651.5
CDS GCA 72 bp CCATTTCCTTGGTTTACAATCCAGGTAGTTAGTTTCTaGTTCTCAACAATTCTCAATAATTTGATTCTCACT +
Preference number: 6 (lower is better)
Translates to: PFPWFTIQVVSF*FSTILNNLILT
Trigger: AGTGAGAATCAAATTATTGAGAATTGTTGAGAAGCAGAAACTAACTACCTGGATTGTAAACCAAGGAAATGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535651.5