RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIK3C2A (Homo sapiens)

Ensembl gene IDs: ENSG00000011405

Ensembl transcript IDs: ENST00000265970.11, ENST00000503729.2, ENST00000531428.1, ENST00000532035.1, ENST00000533645.1

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATGGGCCTCTTGTGAAGAGTCTGCCCTACTCAGGAATGGGCACATaGGTTAACAATTTTCACTTATTTACTGAGGGAGTGGAGTATAGA +
Preference number: 1 (lower is better)
Translates to: HGPLVKSLPYSGMGT*VNNFHLFTEGVEYR
Trigger: TCTATACTCCACTCCCTCAGTAAATAAGTGAAAATTGTTAACCCATGTGCCCATTCCTGAGTAGGGCAGACTCTTCACAAGAGGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR TCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATGTCATGGGCCTCTTGTaGAGAGTCTGCCCTACTCAG +
Preference number: 2 (lower is better)
Translates to: RCPLPRLANFCVETGFHHVMGLL*RVCPTQ
Trigger: CTGAGTAGGGCAGACTCTTCACAAGAGGCCCATGAC...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR CCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCAGGCGGGAGTGCAGTaGCGTGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKQAGVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCACGCCACTGCACTCCCGCCTG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTGCAAAATAGGTGGCTaGACTGACATAGTACTGTCT +
Preference number: 2 (lower is better)
Translates to: YRCPLPRLANFCVETGFHCKIGG*TDIVLS
Trigger: AGACAGTACTATGTCAGTTCAGCCACCTATTTTGCA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACATAGATGTAGGGAGGTaGAATTACCATTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: YRCPLPRLANFCVETGFHIDVGR*NYHSWE
Trigger: TTCCCAGGAATGGTAATTTCACCTCCCTACATCTAT...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTCAGGAATGGGCACATaGGTTAACAATTTTCACTTA +
Preference number: 2 (lower is better)
Translates to: RCPLPRLANFCVETGFHHSGMGT*VNNFHL
Trigger: TAAGTGAAAATTGTTAACCCATGTGCCCATTCCTGA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTCTGTTCTGGGAAACTaGATTGGCGATTGTCCTTTC +
Preference number: 2 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKSVLGN*IGDCPF
Trigger: GAAAGGACAATCGCCAATTCAGTTTCCCAGAACAGA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR GCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTTTACGGTAACATCCTaGATTTTTCCTTTACTTTGG +
Preference number: 2 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKFTVTS*IFPLLW
Trigger: CCAAAGTAAAGGAAAAATGCAGGATGTTACCGTAAA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCCTAGAATTCTTGTCATaGGCCTCTTGTGAAGAGTCT +
Preference number: 2 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLILEFLS*ASCEES
Trigger: AGACTCTTCACAAGAGGCCCATGACAAGAATTCTAG...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTCTGGGAAACTGAATTaGCGATTGTCCTTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLISGKLN*RLSFLS
Trigger: AGAGAGAAAGGACAATCGCCAATTCAGTTTCCCAGA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR CAA 90 bp GGGAAACTGAATTGGCGATTGTCCTTTCTCTCTTGGTATTCTTTATaGCATATTTTGTCAGTTTTCTCACAGCAACCTGATTGGTACAAT +
Preference number: 2 (lower is better)
Translates to: GKLNWRLSFLSWYSL*HILSVFSQQPDWYN
Trigger: ATTGTACCAATCAGGTTGCTGTGAGAAAACTGACAAAATATGCAATAAAGAATACCAAGAGAGAAAGGACAATCGCCAATTCAGTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR CAA 90 bp GCAAGTTCTACATTGGGTTCCTCAGTAGAGAAAATAATAGGTTCTTaGAGTGAACCATTATCTTCAAATCCCAAAACACTGGCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: ASSTLGSSVEKIIGS*SEPLSSNPKTLARR
Trigger: TCTTCTTGCCAGTGTTTTGGGATTTGAAGATAATGGTTCACTCAAAGAACCTATTATTTTCTCTACTGAGGAACCCAATGTAGAACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR TCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTGTTTTTCAGCTCCATaGATAGCAGCTGGATTTTAC +
Preference number: 2 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLICFSAP*IAAGFY
Trigger: GTAAAATCCAGCTGCTATTCATGGAGCTGAAAAACA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR TCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTAAAAGGTTAGTTATGTaGCTGTTGGTCCAACAGATG +
Preference number: 2 (lower is better)
Translates to: TGYCRIISVLSLMILNPIKRLVM*LLVQQM
Trigger: CATCTGTTGGACCAACAGTCACATAACTAACCTTTT...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR GCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCGTGTGCATGTATGCATaGACGTTTATAACTGTTCAT +
Preference number: 2 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFVCMYA*TFITVH
Trigger: ATGAACAGTTATAAACGTGCATGCATACATGCACAC...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR TCA 72 bp AATCTGGACCCTAGAATTCTTGTCATGGGCCTCTTGTaGAGAGTCTGCCCTACTCAGGAATGGGCACATGGG +
Preference number: 3 (lower is better)
Translates to: NLDPRILVMGLL*RVCPTQEWAHG
Trigger: CCCATGTGCCCATTCCTGAGTAGGGCAGACTCTTCACAAGAGGCCCATGACAAGAATTCTAGGGTCCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCTGGACCCTAGAATTCTaGTCATGGGCCTCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFWTLEF*SWASCE
Trigger: TTCACAAGAGGCCCATGACAAGAATTCTAGGGTCCA...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
3UTR-3UTR CAA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAGGTCCAACAGATGTGTaGAAATGCAGCAAGTATATT +
Preference number: 3 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTGPTDV*KCSKYI
Trigger: AATATACTTGCTGCATTTCAACACATCTGTTGGACC...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCAGGCGGGAGTGCAGTaGCGTGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHQAGVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCACGCCACTGCACTCCCGCCTG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTCGTTTTCCTCCTACTaGCAGGAGAGCACCCAAAAC +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHSFSSY*QESTQN
Trigger: GTTTTGGGTGCTCTCCTGTCAGTAGGAGGAAAACGA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCCACTTGGATTTTCCTaGGGGTATCGGAAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHPLGFS*GYRKQE
Trigger: TTCCTGCTTCCGATACCCTCAGGAAAATCCAAGTGG...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTTTTCTGGTGCTGCTTaGCAACTCAAAGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHFSGAA*QLKASL
Trigger: CAGAGAGGCTTTGAGTTGTCAAGCAGCACCAGAAAA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGGTCATGGGCCTCTTGTaGAGAGTCTGCCCTACTCAG +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKVMGLL*RVCPTQ
Trigger: CTGAGTAGGGCAGACTCTTCACAAGAGGCCCATGAC...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCTCCACTCTACTTTTTaGTACGGGCTGAAGATTAGC +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHLHSTF*YGLKIS
Trigger: GCTAATCTTCAGCCCGTACCAAAAAGTAGAGTGGAG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCTGCCAACATCTACTTaGTTCAAGTCATCATGTACC +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHLPTST*FKSSCT
Trigger: GGTACATGATGACTTGAATCAAGTAGATGTTGGCAG...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTGCAGCACTTCCTCTTaGCCACAAACTTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHCSTSS*PQTFRT
Trigger: TGTTCTAAAAGTTTGTGGTCAAGAGGAAGTGCTGCA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTTTGACACATTGCACTaGAGGTCAAGAGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHFDTLH*RSRVVV
Trigger: GACTACAACTCTTGACCTTCAGTGCAATGTGTCAAA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATGCAGAGATTCTGCACTaGGTACACTTAGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHAEILH*VHLVEV
Trigger: AACTTCAACTAAGTGTACTCAGTGCAGAATCTCTGC...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTGCAAAATAGGTGGCTaGACTGACATAGTACTGTCT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHCKIGG*TDIVLS
Trigger: AGACAGTACTATGTCAGTTCAGCCACCTATTTTGCA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACGCTTCTTGTAACAGTTaGCACAGAAAGGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHASCNS*HRKGFS
Trigger: GGAAAATCCCTTTCTGTGGCAACTGTTACAAGAAGC...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATAATAGCCTGGGTTTGTaGGGTGATTGGTATATGGAA +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHNSLGL*GDWYME
Trigger: TTCCATATACCAATCACCGCACAAACCCAGGCTATT...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATATAGTAAACTGGAGCTaGTCTGTTGTAGTCCATGCT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHIVNWS*SVVVHA
Trigger: AGCATGGACTACAACAGAGCAGCTCCAGTTTACTAT...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACGAAAATTGTAGCTTCTaGGTCTGTAGTTTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHENCSF*VCSLGL
Trigger: CAACCCCAAACTACAGACGCAGAAGCTACAATTTTC...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTATTTACTGAGGGAGTaGAGTATAGATGTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHYLLRE*SIDVGR
Trigger: CCTCCCTACATCTATACTCCACTCCCTCAGTAAATA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTCTGGGAAACTGAATTaGCGATTGTCCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHSGKLN*RLSFLS
Trigger: AGAGAGAAAGGACAATCGCCAATTCAGTTTCCCAGA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCATGCAGGGCATCTTTaGGAAGCCAATATAAATTGT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHHAGHL*EANINC
Trigger: ACAATTTATATTGGCTTCTCAAAGATGCCCTGCATG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACAAAAGGTTAGTTATGTaGCTGTTGGTCCAACAGATG +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHKRLVM*LLVQQM
Trigger: CATCTGTTGGACCAACAGTCACATAACTAACCTTTT...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCAGGGGAACTTCCACTaGTCTGATTTAAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHQGNFH*SDLKFQ
Trigger: TTGGAATTTTAAATCAGAGCAGTGGAAGTTCCCCTG...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAAGCTGGGATTACAGATaGCCGCTACCACGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTSWDYR*PLPRLA
Trigger: AGCCAGGCGTGGTAGCGGGCATCTGTAATCCCAGCT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTTCTCAAGTTCAGCTTaGGTGAGCTTTTCTACATCA +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHFSSSA*VSFSTS
Trigger: TGATGTAGAAAAGCTCACCCAAGCTGAACTTGAGAA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACAAATTGTGTGCTATCTaGATATTTCCCAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHKLCAI*IFPNAL
Trigger: CAGGGCATTGGGAAATATCCAGATAGCACACAATTT...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCATTTCGGTAAGAGATaGATAATTTCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHHFGKR*IISQLL
Trigger: GAGGAGCTGTGAAATTATCCATCTCTTACCGAAATG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTTTGACATATGGATTTaGGTCAGCTCCATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHFDIWI*VSSIFS
Trigger: ACTGAAGATGGAGCTGACCCAAATCCATATGTCAAA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTGTGGAAAAAGCAAATaGTGGTGCTTTGATCTGCAT +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHCGKSK*WCFDLH
Trigger: ATGCAGATCAAAGCACCACCATTTGCTTTTTCCACA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACATACAAGCATTTCATTaGATGTCGGATTCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHIQAFH*MSDSSF
Trigger: AAACGAGGAATCCGACATTCAATGAAATGCTTGTAT...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTACCACTTGTTCTaGACTCTTAACTGTACAGTA +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHHYHLF*TLNCTV
Trigger: TACTGTACAGTTAAGAGTTCAGAACAAGTGGTAATG...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACATCGTAGTACAGTTATaGAGTCACATTCAATCCACT +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHIVVQL*SHIQST
Trigger: AGTGGATTGAATGTGACTTCATAACTGTACTACGAT...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATACTTGTCTATCCTTTTaGAGTTTTGCTAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHTCLSF*SFAKAS
Trigger: AGAGGCTTTAGCAAAACTGCAAAAGGATAGACAAGT...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCGAATATTTAAAGACTaGCTTCTTGTAACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHRIFKD*LLVTVA
Trigger: GGCAACTGTTACAAGAAGCCAGTCTTTAAATATTCG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCCTGGGTTTGTGCGGTaGTTGGTATATGGAAATTTG +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKPGFVR*LVYGNL
Trigger: CAAATTTCCATATACCAATCACCGCACAAACCCAGG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAAACAACCTGTCTGGCTaGTCCACTAGCCTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTNNLSG*STSLPY
Trigger: GTAAGGCAGGCTAGTGGATCAGCCAGACAGGTTGTT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGGGATCGACAAAAAGCTaGCATCTCCTCATTCTGTAC +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKGSTKS*HLLILY
Trigger: GTACAGAATGAGGAGATGGCAGCTTTTTGTCGATCC...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCTCTGTTGTAGTCCATaGTTCCTTGACACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKLCCSP*FLDTLA
Trigger: AGCAAGAGTGTCAAGGAAGCATGGACTACAACAGAG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACGTCTTAGGGTTTCTTTaGTATATCCACTGTATACAA +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHVLGFL*YIHCIQ
Trigger: TTGTATACAGTGGATATAGCAAAGAAACCCTAAGAC...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATACTGTCATAATAGACTaGAAAAAGGCAGTACATGTT +
Preference number: 4 (lower is better)
Translates to: RCPLPRLANFCVETGFHHTVIID*KKAVHV
Trigger: AACATGTACTGCCTTTTTGCAGTCTATTATGACAGT...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp CTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTGCTCACTGCAACCTCTaGCTCCCGGTTTCAACCAAT +
Preference number: 4 (lower is better)
Translates to: LPVKTTSSLREYNVSLISAHCNL*LPVSTN
Trigger: ATTGGTTGAAACCGGGAGGCAGAGGTTGCAGTGAGC...AGAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTCACAGCAACCTGATTaGTACAATTTCTATTACCAT +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHSQQPD*YNFYYH
Trigger: ATGGTAATAGAAATTGTACCAATCAGGTTGCTGTGA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACGTTTTTAAATTACAGTaGCTAAGTGATAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: YRCPLPRLANFCVETGFHVFKLQ*LSDNWW
Trigger: CCACCAGTTATCACTTAGCCACTGTAATTTAAAAAC...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGAAAATAGAGCTGTGCTaGAAAGGAAGGGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKKIELC*KGRAQN
Trigger: ATTCTGAGCCCTTCCTTTTCAGCACAGCTCTATTTT...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCCCATTTGGGTCTTTCTaGGATATATGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ISLINQLPETLPVKTTSSPFGSF*DIWPWA
Trigger: AGCCCAGGGCCATATATCTCAGAAAGACCCAAATGG...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGACAGCTTTAATTACTTaGTCTACTGCTCGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKTALIT*STARCW
Trigger: CCAACACCGAGCAGTAGATCAAGTAATTAAAGCTGT...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTCTGTAGTTTGGGGTTaGAGTGCATCTCTAACGTAT +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKSVVWG*SASLTY
Trigger: ATACGTTAGAGATGCACTTCAACCCCAAACTACAGA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTCTCTTTGCTCAAGTTaGAATCTTTCAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKSLCSS*NLSKAG
Trigger: CCCTGCCTTTGAAAGATTTCAACTTGAGCAAAGAGA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTTTGTCCACATCTTTTaGTCTTGTTGGTTCCGGATG +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKFVHIF*SCWFRM
Trigger: CATCCGGAACCAACAAGAGCAAAAGATGTGGACAAA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCCCATTAATGACATATaGCATATCAGAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKPINDI*HIRGQH
Trigger: GTGCTGACCTCTGATATGGCATATGTCATTAATGGG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACCAGTTGGCAAACTACTaGTCCCATTTGGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NQLPETLPVKTTSSLREYQLANY*SHLGLS
Trigger: AGAAAGACCCAAATGGGACCAGTAGTTTGCCAACTG...GTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTGTTGGTTCCGGATGTaGAGATGGACATTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKCWFRM*RWTFFK
Trigger: TTTAAAGAATGTCCATCTTCACATCCGGAACCAACA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTTTTCTGGTGCTGCTTaGCAACTCAAAGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLFSGAA*QLKASL
Trigger: CAGAGAGGCTTTGAGTTGTCAAGCAGCACCAGAAAA...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGACCTTTCTTTCAAGATaGCAATTTGCTGTCGATCTC +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKTFLSR*QFAVDL
Trigger: GAGATCGACAGCAAATTGTCATCTTGAAAGAAAGGT...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTGTTTCTTTGTGCTGTaGCTGGACTTAACAAATAGC +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKCFFVL*LDLTNS
Trigger: GCTATTTGTTAAGTCCAGTCACAGCACAAAGAAACA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGTTCGGGCCAGATTTTaGCACATTGCACTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIVRARF*HIALKV
Trigger: GACCTTCAGTGCAATGTGTCAAAATCTGGCCCGAAC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCCCACTAGACTTGGCTTaGGAGGGAGACGGCATTTAT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIPLDLA*EGDGIY
Trigger: ATAAATGCCGTCTCCCTCTCAAGCCAAGTCTAGTGG...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCGAGCCCGATCCCTTTTaGAGCTGCCAAACATCTGTG +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFEPDPF*SCQTSV
Trigger: CACAGATGTTTGGCAGCTTCAAAAGGGATCGGGCTC...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGTTGCCGCAGTCAGCTaGTACCATTTAACCGTCTCT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIVAAVS*YHLTVS
Trigger: AGAGACGGTTAAATGGTATCAGCTGACTGCGGCAAC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGGAAGCCATTTTGGAATaGAGCCTGTTTACTGTAAGT +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKEAILE*SLFTVS
Trigger: ACTTACAGTAAACAGGCTGCATTCCAAAATGGCTTC...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCATGGCCCTGGGCTTTTaGAAGCTGAGTTGTTCGAAT +
Preference number: 4 (lower is better)
Translates to: ISLINQLPETLPVKTTSSMALGF*KLSCSN
Trigger: ATTCGAACAACTCAGCTTGCAAAAGCCCAGGGCCAT...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCGTGGATGAAAGGGTGTaGCAGGTGTCAAAGGATATG +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLVDERV*QVSKDM
Trigger: CATATCCTTTGACACCTGCCACACCCTTTCATCCAC...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGACTACTGGTCCCATTTaGGTCTTTCTGAGATATATG +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKTTGPI*VFLRYM
Trigger: CATATATCTCAGAAAGACCCAAATGGGACCAGTAGT...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTCCTCCTATTTGGCCTaGAGTAGGACTGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLISSYLA*SRTEGT
Trigger: GGTTCCTTCAGTCCTACTCCAGGCCAAATAGGAGGA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACCAAGTTCAGCTTGGGTaGGCTTTTCTACATCAATAT +
Preference number: 4 (lower is better)
Translates to: NQLPETLPVKTTSSLREYQVQLG*AFLHQY
Trigger: ATATTGATGTAGAAAAGCTCACCCAAGCTGAACTTG...GTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp TCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTATGGGCATTCTTGGATTaGAGCCATTTTGGAATGCAG +
Preference number: 4 (lower is better)
Translates to: SLINQLPETLPVKTTSSLWAFLD*SHFGMQ
Trigger: CTGCATTCCAAAATGGCTTCAATCCAAGAATGCCCA...TAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTCCATTTGGGTCTTTCTaGGATATATGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIPFGSF*DIWPWA
Trigger: AGCCCAGGGCCATATATCTCAGAAAGACCCAAATGG...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTGTACTTCAACTTCTTaGAGAAGAGAACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKCTSTS*RRELPV
Trigger: AACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCCCTGGGTTTGTGCGGTaGTTGGTATATGGAAATTTG +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLPGFVR*LVYGNL
Trigger: CAAATTTCCATATACCAATCACCGCACAAACCCAGG...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCATGGCCCTGGGCTTTTaGAAGCTGAGTTGTTCGAAT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIMALGF*KLSCSN
Trigger: ATTCGAACAACTCAGCTTGCAAAAGCCCAGGGCCAT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp TCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTAGGATCGACAAAAAGCTaGCATCTCCTCATTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SLINQLPETLPVKTTSSLGSTKS*HLLILY
Trigger: GTACAGAATGAGGAGATGGCAGCTTTTTGTCGATCC...TAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAGAGGTAAAGAAACTTTaGCCAAAGCTTCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTEVKKL*PKLLVP
Trigger: AGGGACCAGAAGCTTTGGGCAAAGTTTCTTTACCTC...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAGCTGATCCACTAGCCTaGCTTACTTTTTCTGCTACT +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTADPLA*LTFSAT
Trigger: AGTAGCAGAAAAAGTAAGGCAGGCTAGTGGATCAGC...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCAGGACTGAAGGAACCTaGATCTGCAGACCTAGCTAT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIRTEGT*ICRPSY
Trigger: ATAGCTAGGTCTGCAGATGCAGGTTCCTTCAGTCCT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAAAGGTAAAGCATAAGTaGAAGGCCCAGGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTKVKHK*KAQVIQ
Trigger: CTGGATTACCTGGGCCTTCCACTTATGCTTTACCTT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp CTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTAAGGTAAAGCATAAGTaGAAGGCCCAGGTAATCCAG +
Preference number: 4 (lower is better)
Translates to: LPVKTTSSLREYNVSLISKVKHK*KAQVIQ
Trigger: CTGGATTACCTGGGCCTTCCACTTATGCTTTACCTT...AGAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGTGGATGAAAGGGTGTaGCAGGTGTCAAAGGATATG +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIVDERV*QVSKDM
Trigger: CATATCCTTTGACACCTGCCACACCCTTTCATCCAC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACACAGGGTGTCTCGTCATaGCTTCTTTGCAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTQGVSS*LLCKVF
Trigger: AAAAACCTTGCAAAGAAGCCATGACGAGACACCCTG...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTGCCTAAAACATAGGTaGCTACACAGCATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLICLKHR*LHSIQH
Trigger: GTGCTGGATGCTGTGTAGCCACCTATGTTTTAGGCA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTACAGCTCCTCCTATTTaGCCTGGAGTAGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPITAPPI*PGVGLK
Trigger: CTTCAGTCCTACTCCAGGCCAAATAGGAGGAGCTGT...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCAAAATAGAGCTGTGCTaGAAAGGAAGGGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLKIELC*KGRAQN
Trigger: ATTCTGAGCCCTTCCTTTTCAGCACAGCTCTATTTT...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCCTGCCAACATCTACTTaGTTCAAGTCATCATGTACC +
Preference number: 4 (lower is better)
Translates to: ISLINQLPETLPVKTTSSLPTST*FKSSCT
Trigger: GGTACATGATGACTTGAATCAAGTAGATGTTGGCAG...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTCAGCATTCACCATTGTaGCTTTTAGGGGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIQHSPL*LLGGQH
Trigger: ATGCTGTCCCCCTAAAAGTCACAATGGTGAATGCTG...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACATGTTCGGAAGACAAATaGTGGTTCAATCTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTCSEDK*WFNLSF
Trigger: GAAGGACAGATTGAACCATCATTTGTCTTCCGAACA...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCCCACCCCGTCCCAGTaGTATATTATCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFPTPSQ*YIINSS
Trigger: AGAAGAGTTGATAATATATCACTGGGACGGGGTGGG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCCTGTTGCTAGATATCTaGGCCATGTCCACTAAAAAG +
Preference number: 4 (lower is better)
Translates to: TLPVKTTSSLREYNVSLILLLDI*AMSTKK
Trigger: CTTTTTAGTGGACATGGCTCAGATATCTAGCAACAG...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp TCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTATTTGTCCACATCTTTTaGTCTTGTTGGTTCCGGATG +
Preference number: 4 (lower is better)
Translates to: SLINQLPETLPVKTTSSLFVHIF*SCWFRM
Trigger: CATCCGGAACCAACAAGAGCAAAAGATGTGGACAAA...TAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp CTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTGCTTCTTGTAACAGTTaGCACAGAAAGGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LPVKTTSSLREYNVSLISASCNS*HRKGFS
Trigger: GGAAAATCCCTTTCTGTGGCAACTGTTACAAGAAGC...AGAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp CTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTAATAGCCTGGGTTTGTaGGGTGATTGGTATATGGAA +
Preference number: 4 (lower is better)
Translates to: LPVKTTSSLREYNVSLISNSLGL*GDWYME
Trigger: TTCCATATACCAATCACCGCACAAACCCAGGCTATT...AGAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACATGTTTCATCATCTTCTaGTGTTCGGGCCAGATTTTG +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTCFIIF*CSGQIL
Trigger: CAAAATCTGGCCCGAACAGCAGAAGATGATGAAACA...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAACTCCTACCAGAATTTaGATGGAGTCTGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTTPTRI*MESEKI
Trigger: GATCTTCTCAGACTCCATGCAAATTCTGGTAGGAGT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCTGGACAAAAGGAATTaGACTAATGAACTATTCAAG +
Preference number: 4 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKLDKRN*TNELFK
Trigger: CTTGAATAGTTCATTAGTGCAATTCCTTTTGTCCAG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACACTGGATATTTCCCAATaGCCTGGACAAAAGGAATTG +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTLDISQ*PGQKEL
Trigger: CAATTCCTTTTGTCCAGGGCATTGGGAAATATCCAG...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCAAGAGAACTTCCAGTTaGCAAACTACTGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: ISLINQLPETLPVKTTSSKRTSS*QTTGPI
Trigger: AATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTT...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAACACCATATTCCACTTaGATTTTCCTGAGGGTATCG +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTTPYST*IFLRVS
Trigger: CGATACCCTCAGGAAAATCCAAGTGGAATATGGTGT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTGTTGGTTCCGGATGTaGAGATGGACATTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: TLPVKTTSSLREYNVSLICWFRM*RWTFFK
Trigger: TTTAAAGAATGTCCATCTTCACATCCGGAACCAACA...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCTGGGCATTCTTGGATTaGAGCCATTTTGGAATGCAG +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFWAFLD*SHFGMQ
Trigger: CTGCATTCCAAAATGGCTTCAATCCAAGAATGCCCA...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCACCAGTCAAATTTACTaGTATCCTCAGACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TLPVKTTSSLREYNVSLITSQIY*YPQTLE
Trigger: CTCCAAAGTCTGAGGATATCAGTAAATTTGACTGGT...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCACCTTTCTTTCAAGATaGCAATTTGCTGTCGATCTC +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLTFLSR*QFAVDL
Trigger: GAGATCGACAGCAAATTGTCATCTTGAAAGAAAGGT...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTGTTTCTTTGTGCTGTaGCTGGACTTAACAAATAGC +
Preference number: 4 (lower is better)
Translates to: TLPVKTTSSLREYNVSLICFFVL*LDLTNS
Trigger: GCTATTTGTTAAGTCCAGTCACAGCACAAAGAAACA...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp AACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATTGCAGCACTTCCTCTTaGCCACAAACTTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: NSSCKDYKLLKGIQCLTYCSTSS*PQTFRT
Trigger: TGTTCTAAAAGTTTGTGGTCAAGAGGAAGTGCTGCA...ATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCTCTGCTACATCCGTTaGAGCATTCATCAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFLCYIR*SIHQTL
Trigger: CAGAGTTTGATGAATGCTTCAACGGATGTAGCAGAG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCTGAGTACACTTAGTTaGAGTTCTCGCTGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFLSTLS*SSRCLR
Trigger: CCTAAGACAGCGAGAACTTCAACTAAGTGTACTCAG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACATGTTTTTCAGCTCCATaGATAGCAGCTGGATTTTAC +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTCFSAP*IAAGFY
Trigger: GTAAAATCCAGCTGCTATTCATGGAGCTGAAAAACA...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCTCTGTTCTGGGAAACTaGATTGGCGATTGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFSVLGN*IGDCPF
Trigger: GAAAGGACAATCGCCAATTCAGTTTCCCAGAACAGA...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCAGTTTACAAGTATGTTaGCGCAGTCAGCTGATACCA +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLISLQVC*RSQLIP
Trigger: TGGTATCAGCTGACTGCGGCAACATACTTGTAAACT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAGTAACAGTGCATGTTaGAAGAGGAATATAGTCTAT +
Preference number: 4 (lower is better)
Translates to: NQLPETLPVKTTSSLREYSNSAC*KRNIVY
Trigger: ATAGACTATATTCCTCTTGCAACATGCACTGTTACT...GTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTTCTCAAGTTCAGCTTaGGTGAGCTTTTCTACATCA +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLFSSSA*VSFSTS
Trigger: TGATGTAGAAAAGCTCACCCAAGCTGAACTTGAGAA...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCACTACTGGTCCCATTTaGGTCTTTCTGAGATATATG +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLTTGPI*VFLRYM
Trigger: CATATATCTCAGAAAGACCCAAATGGGACCAGTAGT...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTCAGTTGGCAAACTACTaGTCCCATTTGGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIQLANY*SHLGLS
Trigger: AGAAAGACCCAAATGGGACCAGTAGTTTGCCAACTG...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCGGTTTGTGCGGTGATTaGTATATGGAAATTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLGLCGD*YMEIWS
Trigger: AGACCAAATTTCCATATACCAATCACCGCACAAACC...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAGCAAAAATAGTAAACTaGAGCTGCTCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTAKIVN*SCSVVV
Trigger: GACTACAACAGAGCAGCTCCAGTTTACTATTTTTGC...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAGGGTTTAACTACATATaGACCATTAGTGTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTGFNYI*TISVRH
Trigger: GTGCCTAACACTAATGGTCCATATGTAGTTAAACCC...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTGGCTAAGTGATAACTaGTGGAATGGAATTCGGTCT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIWLSDN*WNGIRS
Trigger: AGACCGAATTCCATTCCACCAGTTATCACTTAGCCA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTGGGCTTTTGCAAGCTaGGTTGTTCGAATATTTAAA +
Preference number: 4 (lower is better)
Translates to: TLPVKTTSSLREYNVSLIWAFAS*VVRIFK
Trigger: TTTAAATATTCGAACAACTCAGCTTGCAAAAGCCCA...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTGTACTTCAACTTCTTaGAGAAGAGAACTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TLPVKTTSSLREYNVSLICTSTS*RRELPV
Trigger: AACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACA...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAAAAGTAACTGGTAGCTaGAATCCTTCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTKVTGS*NPSMSM
Trigger: CATTGACATTGAAGGATTTCAGCTACCAGTTACTTT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp TCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTAAAAGTAACTGGTAGCTaGAATCCTTCAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: SLINQLPETLPVKTTSSLKVTGS*NPSMSM
Trigger: CATTGACATTGAAGGATTTCAGCTACCAGTTACTTT...TAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR TCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAAATTTGCATGGAGTCTaGGAAGATCATAAATTGCTG +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTNLHGV*EDHKLL
Trigger: CAGCAATTTATGATCTTCTCAGACTCCATGCAAATT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAAGGGATCTTACTTCCTaGTCAGCAAATTTTGAATCA +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTRDLTS*SANFES
Trigger: TGATTCAAAATTTGCTGATCAGGAAGTAAGATCCCT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACACAGTTGAGAGACATTTaGAAATTACCATCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTQLRDI*KLPSSD
Trigger: ATCTGAGGATGGTAATTTTCAAATGTCTCTCAACTG...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCATAGATGTAGGGAGGTaGAATTACCATTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFIDVGR*NYHSWE
Trigger: TTCCCAGGAATGGTAATTTCACCTCCCTACATCTAT...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCACTTGTCTATCCTTTTaGAGTTTTGCTAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLTCLSF*SFAKAS
Trigger: AGAGGCTTTAGCAAAACTGCAAAAGGATAGACAAGT...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCACCCAGCAAAGGGCTTaGATTATAATGATTTCTACA +
Preference number: 4 (lower is better)
Translates to: TLPVKTTSSLREYNVSLITQQRA*IIMIST
Trigger: TGTAGAAATCATTATAATGCAAGCCCTTTGCTGGGT...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTTGTGTCGATCACAGATaGCTAAAACATAGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPICVDHR*LKHRWL
Trigger: TAGCCACCTATGTTTTAGGCATCTGTGATCGACACA...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCCGAATATTTAAAGACTaGCTTCTTGTAACAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLRIFKD*LLVTVA
Trigger: GGCAACTGTTACAAGAAGCCAGTCTTTAAATATTCG...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCAAGAGAACTTCCAGTTaGCAAACTACTGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFKRTSS*QTTGPI
Trigger: AATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTT...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGGTTTGTGCGGTGATTaGTATATGGAAATTTGGTCT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIGLCGD*YMEIWS
Trigger: AGACCAAATTTCCATATACCAATCACCGCACAAACC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCTAGAATTCTTGTCATaGGCCTCTTGTGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFLEFLS*ASCEES
Trigger: AGACTCTTCACAAGAGGCCCATGACAAGAATTCTAG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCATTCAGGAAACACCATaGGATCATAATCCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFIQETP*DHNPAC
Trigger: ACAAGCAGGATTATGATCTCATGGTGTTTCCTGAAT...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCAAGTTCAGCTTGGGTaGGCTTTTCTACATCAATAT +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFQVQLG*AFLHQY
Trigger: ATATTGATGTAGAAAAGCTCACCCAAGCTGAACTTG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTACCAGTCAAATTTACTaGTATCCTCAGACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPITSQIY*YPQTLE
Trigger: CTCCAAAGTCTGAGGATATCAGTAAATTTGACTGGT...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCCTTTTAGAACATAGCTaGCAACATCTACTTGATTCA +
Preference number: 4 (lower is better)
Translates to: ISLINQLPETLPVKTTSSLLEHS*QHLLDS
Trigger: TGAATCAAGTAGATGTTGGCAGCTATGTTCTAAAAG...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR GCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTAAAGCTAACATATCTTaGCGAAGATCTTCACCAACC +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIKANIS*RRSSPT
Trigger: GGTTGGTGAAGATCTTCGGCAAGATATGTTAGCTTT...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTGAAACATGTGTCCCGTaGTTCGAAGCATTATATTGT +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIETCVP*FEALYC
Trigger: ACAATATAATGCTTCGAAGCACGGGACACATGTTTC...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGTGTGCATGTATGCATaGACGTTTATAACTGTTCAT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIVCMYA*TFITVH
Trigger: ATGAACAGTTATAAACGTGCATGCATACATGCACAC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCAAAAGTGGGCATTCTTaGATTGAAGCCATTTTGGAA +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIKSGHS*IEAILE
Trigger: TTCCAAAATGGCTTCAATCCAAGAATGCCCACTTTT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCAGCAGTTTTACTCCTTaGAAGATTAACTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLISSFTP*KINCSL
Trigger: AAGAGAGCAGTTAATCTTCCAAGGAGTAAAACTGCT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTCACGAAGTAAAGGGTaGAAGAAAGTACAAACAAGA +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLISRSKG*KKVQTR
Trigger: TCTTGTTTGTACTTTCTTCCACCCTTTACTTCGTGA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTGTATGTTTTGACATATaGATTTGGGTCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIVCFDI*IWVSSI
Trigger: GATGGAGCTGACCCAAATCCATATGTCAAAACATAC...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTCAGGAATGGGCACATaGGTTAACAATTTTCACTTA +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLISGMGT*VNNFHL
Trigger: TAAGTGAAAATTGTTAACCCATGTGCCCATTCCTGA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTGTTTACAAGACAAACTaGTCTACACAGACAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIVYKTN*STQTKV
Trigger: GACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAAC...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCTAAGTGATAACTGGTaGAATGGAATTCGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFLSDNW*NGIRSQ
Trigger: TTGAGACCGAATTCCATTCCACCAGTTATCACTTAG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAATGGAAATGAATGTATaGATTATGATAGTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTMEMNV*IMIVGV
Trigger: AACCCCCACTATCATAATCCATACATTCATTTCCAT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCTGGGCTTTTGCAAGCTaGGTTGTTCGAATATTTAAA +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFWAFAS*VVRIFK
Trigger: TTTAAATATTCGAACAACTCAGCTTGCAAAAGCCCA...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR TCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTCTTTTTGGTACGGGCTaGAGATTAGCATTTCATAAA +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPILFGTG*RLAFHK
Trigger: TTTATGAAATGCTAATCTTCAGCCCGTACCAAAAAG...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTACCCAGCAAAGGGCTTaGATTATAATGATTTCTACA +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPITQQRA*IIMIST
Trigger: TGTAGAAATCATTATAATGCAAGCCCTTTGCTGGGT...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCCTTTTAGAACATAGCTaGCAACATCTACTTGATTCA +
Preference number: 4 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLILLEHS*QHLLDS
Trigger: TGAATCAAGTAGATGTTGGCAGCTATGTTCTAAAAG...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCAGTTTGGGGTTGAAGTaGATCTCTAACGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFSLGLK*ISNVFQ
Trigger: TTGAAATACGTTAGAGATGCACTTCAACCCCAAACT...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATGCGGTGATTGGTATATaGAAATTTGGTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: NSSCKDYKLLKGIQCLTYAVIGI*KFGLQF
Trigger: AAATTGAAGACCAAATTTCCATATACCAATCACCGC...ATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTGGAAAAAGCAAATGGTaGTGCTTTGATCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIGKSKW*CFDLHF
Trigger: AAAATGCAGATCAAAGCACCACCATTTGCTTTTTCC...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTAATTACTTGATCTACTaGTCGGTGTTGGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPINYLIY*SVLVFN
Trigger: ATTGAAAACCAACACCGAGCAGTAGATCAAGTAATT...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR GCA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTTTTACGGTAACATCCTaGATTTTTCCTTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: TGYCRIISVLSLMILNPIFTVTS*IFPLLW
Trigger: CCAAAGTAAAGGAAAAATGCAGGATGTTACCGTAAA...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CCA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCGCGGTGATTGGTATATaGAAATTTGGTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFAVIGI*KFGLQF
Trigger: AAATTGAAGACCAAATTTCCATATACCAATCACCGC...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CCA 90 bp GCAAGAGATCGTCAATCCAGCCTCATCCCGGCATGCATCGGTCTTTaGTCAGCCTTGTTGCCAGAGCGGGAATTTGAGGCTGACGCCAGC +
Preference number: 5 (lower is better)
Translates to: ARDRQSSLIPACIGL*SALLPEREFEADAS
Trigger: GCTGGCGTCAGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAGGCTGGATTGACGATCTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS GCA 90 bp AATCCAGCCTCATCCCGGCATGCATCGGTCTTTGGTCAGCCTTGTTaGCAGAGCGGGAATTTGAGGCTGACGCCAGCTTGCGTCGAAATT +
Preference number: 5 (lower is better)
Translates to: NPASSRHASVFGQPC*QSGNLRLTPACVEI
Trigger: AATTTCGACGCAAGCTGGCGTCAGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAGGCTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS GCA 90 bp TCTCATGTACAGCACTGCTTTATATATGTAGTCGAATCCTCAAGCTaGCTGAGCCTCCGCCTCTACCACAACCTGAGCCGCCGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: SHVQHCFIYVVESSS*LSLRLYHNLSRRSR
Trigger: GCGGCTTCGGCGGCTCAGGTTGTGGTAGAGGCGGAGGCTCAGGCAGCTTGAGGATTCGACTACATATATAAAGCAGTGCTGTACATGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503729.2
CDS GCA 90 bp TTGTGCGGTGATTGGTATATGGAAATTTGGTCTTCAATCTCAAGCTaGCTGAGCCTCCGCCTCTACCACAACCTGAGCCGCCGAAGCCGC +
Preference number: 5 (lower is better)
Translates to: LCGDWYMEIWSSISS*LSLRLYHNLSRRSR
Trigger: GCGGCTTCGGCGGCTCAGGTTGTGGTAGAGGCGGAGGCTCAGGCAGCTTGAGATTGAAGACCAAATTTCCATATACCAATCACCGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS GCA 90 bp CATTTCAGCGTCGCAAGAGATCGTCAATCCAGCCTCATCCCGGCATaGATCGGTCTTTGGTCAGCCTTGTTGCCAGAGCGGGAATTTGAG +
Preference number: 5 (lower is better)
Translates to: HFSVARDRQSSLIPA*IGLWSALLPEREFE
Trigger: CTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAGGCTGGATTGACGATCTCTTGCGACGCTGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS-3UTR CAA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTGTTCGGGCCAGATTTaGACACATTGCACTGAAGGT +
Preference number: 5 (lower is better)
Translates to: YRCPLPRLANFCVETGFHCSGQI*THCTEG
Trigger: ACCTTCAGTGCAATGTGTCAAAATCTGGCCCGAACA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATGTGGGCATTCTTGGATaGAAGCCATTTTGGAATGCA +
Preference number: 5 (lower is better)
Translates to: RCPLPRLANFCVETGFHHVGILG*KPFWNA
Trigger: TGCATTCCAAAATGGCTTCAATCCAAGAATGCCCAC...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCACACCATATTCCACTaGGATTTTCCTGAGGGTATC +
Preference number: 5 (lower is better)
Translates to: RCPLPRLANFCVETGFHHHTIFH*DFPEGI
Trigger: GATACCCTCAGGAAAATCCAAGTGGAATATGGTGTG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTTTCTCAAGTTCAGCTaGGGTGAGCTTTTCTACATC +
Preference number: 5 (lower is better)
Translates to: RCPLPRLANFCVETGFHHFLKFS*GELFYI
Trigger: GATGTAGAAAAGCTCACCCAAGCTGAACTTGAGAAA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGGCCACTAGACTTGGCTaGAGAGGGAGACGGCATTTA +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKATRLG*RGRRHL
Trigger: TAAATGCCGTCTCCCTCTCAAGCCAAGTCTAGTGGC...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTCTTCTTCAGAGGGATaGTATTTCCTTAGCCACTCT +
Preference number: 5 (lower is better)
Translates to: YRCPLPRLANFCVETGFHSSSEG*YFLSHS
Trigger: AGAGTGGCTAAGGAAATACAATCCCTCTGAAGAAGA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGGGAGCCCGATCCCTTTaGAAGCTGCCAAACATCTGT +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKGARSL*KLPNIC
Trigger: ACAGATGTTTGGCAGCTTCAAAAGGGATCGGGCTCC...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CCA 90 bp GCAAGTGGTTTATCTTTAAAGGATCCTGTCACACCATATTCCACTTaGATTTTCCTGAGGGTATCGGAAGCAGGAACCAGCTCCACCATG +
Preference number: 5 (lower is better)
Translates to: ASGLSLKDPVTPYST*IFLRVSEAGTSSTM
Trigger: CATGGTGGAGCTGGTTCCTGCTTCCGATACCCTCAGGAAAATCCAAGTGGAATATGGTGTGACAGGATCCTTTAAAGATAAACCACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CCA 90 bp TTAACAAATAGCCTGGGTTTGTGCGGTGATTGGTATATGGAAATTTaGTCTTCAATCTCAAGCTGCCTGAGCCTCCGCCTCTACCACAAC +
Preference number: 5 (lower is better)
Translates to: LTNSLGLCGDWYMEI*SSISSCLSLRLYHN
Trigger: GTTGTGGTAGAGGCGGAGGCTCAGGCAGCTTGAGATTGAAGACCAAATTTCCATATACCAATCACCGCACAAACCCAGGCTATTTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS-3UTR CAA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCTGATTGTCAGTCACTaGTCTATCCTTTTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: RCPLPRLANFCVETGFHHLIVSH*SILLQF
Trigger: AAACTGCAAAAGGATAGACAAGTGACTGACAATCAG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCCATTTTCGACAGTTTaGAATATGCTCATGACTTCC +
Preference number: 5 (lower is better)
Translates to: YRCPLPRLANFCVETGFHPFSTV*NMLMTS
Trigger: GGAAGTCATGAGCATATTCAAAACTGTCGAAAATGG...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATCCAGTTGAGAGACATTaGAAAATTACCATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RCPLPRLANFCVETGFHHPVERH*KITILR
Trigger: TCTGAGGATGGTAATTTTCAAATGTCTCTCAACTGG...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACGGTCCAACAGATGTGTaGAAATGCAGCAAGTATATT +
Preference number: 5 (lower is better)
Translates to: YRCPLPRLANFCVETGFHGPTDV*KCSKYI
Trigger: AATATACTTGCTGCATTTCAACACATCTGTTGGACC...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTTTCAAGATGACAATTaGCTGTCGATCTCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: RCPLPRLANFCVETGFHHFQDDN*LSISLQ
Trigger: TTGAAGAGAGATCGACAGCAAATTGTCATCTTGAAA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTTGATACCCAATTACTaGAAATTCCATGAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: YRCPLPRLANFCVETGFHLIPNY*KFHEQQ
Trigger: TTGCTGCTCATGGAATTTCAAGTAATTGGGTATCAA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACCATTCAGTAACAAGATCTTaGATATGCATCACCATGATG +
Preference number: 5 (lower is better)
Translates to: RCPLPRLANFCVETGFHHSVTRS*ICITMM
Trigger: CATCATGGTGATGCATATCAAAGATCTTGTTACTGA...ATGGTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TACAGATGCCCGCTACCACGCCTGGCTAATTTTTGTGTAGAGACGGGGTTTCACTATACAAGCATTTCATaGAATGTCGGATTCCTCGTT +
Preference number: 5 (lower is better)
Translates to: YRCPLPRLANFCVETGFHYTSIS*NVGFLV
Trigger: AACGAGGAATCCGACATTCAATGAAATGCTTGTATA...GTGAAACCCCGTCTCTACACAAAAATTAGCCAGGCGTGGTAGCGGGCATCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS GCA 90 bp TATGTGACTCCCATTTTTGGCTCACATATTTCTCATGTACAGCACTaGTTTATATATGTAGTCGAATCCTCAAGCTGCCTGAGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: YVTPIFGSHISHVQH*FIYVVESSSCLSLR
Trigger: GCGGAGGCTCAGGCAGCTTGAGGATTCGACTACATATATAAAGCAGTGCTGTACATGAGAAATATGTGAGCCAAAAATGGGAGTCACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503729.2
CDS CCA 90 bp GCAGACCTAGCTATCCCTTCAGCTTTCTCATCACGAAGTAAAGGGTaGAAGAAAGTACAAACAAGATCACACTCTGCTACATCCGTTGAA +
Preference number: 5 (lower is better)
Translates to: ADLAIPSAFSSRSKG*KKVQTRSHSATSVE
Trigger: TTCAACGGATGTAGCAGAGTGTGATCTTGTTTGTACTTTCTTCCACCCTTTACTTCGTGATGAGAAAGCTGAAGGGATAGCTAGGTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCATCTTTTGCTCTTGTaGGTTCCGGATGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKHLLLL*VPDVKM
Trigger: CATCTTCACATCCGGAACCAACAAGAGCAAAAGATG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS GCA 90 bp ACTTCTGCAGCACTTCCTCTTGACCACAAACTTTTAGAACATAGCTaGCAACATCTACTTGATTCAAGTCATCATGTACCCAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: TSAALPLDHKLLEHS*QHLLDSSHHVPSKG
Trigger: CCCTTTGCTGGGTACATGATGACTTGAATCAAGTAGATGTTGGCAGCTATGTTCTAAAAGTTTGTGGTCAAGAGGAAGTGCTGCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS CCA 90 bp CTCCTCATTCTGTACTTCAACTTCTTGAAGAAGAGAACTTCCAGTTaGCAAACTACTGGTCCCATTTGGGTCTTTCTGAGATATATGGCC +
Preference number: 5 (lower is better)
Translates to: LLILYFNFLKKRTSS*QTTGPIWVFLRYMA
Trigger: GGCCATATATCTCAGAAAGACCCAAATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACAGAATGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTGGATTGAAGCCATTTaGGAATGCAGCCTGTTTACT +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKWIEAI*ECSLFT
Trigger: AGTAAACAGGCTGCATTCCAAAATGGCTTCAATCCA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTATGGCCCTGGGCTTTaGCAAGCTGAGTTGTTCGAA +
Preference number: 5 (lower is better)
Translates to: TLPVKTTSSLREYNVSLIYGPGL*QAELFE
Trigger: TTCGAACAACTCAGCTTGCAAAAGCCCAGGGCCATA...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS TCA 90 bp TGCTTCTTCTTTGTCCACATCTTTTGCTCTTGTTGGTTCCGGATGTaGAGATGGACATTCTTTAAATCCGCTGTTGCTAGATATCTGAGC +
Preference number: 5 (lower is better)
Translates to: CFFFVHIFCSCWFRM*RWTFFKSAVARYLS
Trigger: GCTCAGATATCTAGCAACAGCGGATTTAAAGAATGTCCATCTTCACATCCGGAACCAACAAGAGCAAAAGATGTGGACAAAGAAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265970.11
ENST00000532035.1
ENST00000533645.1
CDS GCA 90 bp TATTCTGCAGCACTTCCTCTTGACCACAAACTTTTAGAACATAGCTaGCAACATCTACTTGATTCAAGTCATCATGTACCCAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: YSAALPLDHKLLEHS*QHLLDSSHHVPSKG
Trigger: CCCTTTGCTGGGTACATGATGACTTGAATCAAGTAGATGTTGGCAGCTATGTTCTAAAAGTTTGTGGTCAAGAGGAAGTGCTGCAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCCCACATCTTTTGCTCTaGTTGGTTCCGGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLPHLLL*LVPDVK
Trigger: CTTCACATCCGGAACCAACAAGAGCAAAAGATGTGG...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGGGAGATACCTGTAGATaGCTGACTTTTGAATCTGTT +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKGDTCR*LTFESV
Trigger: AACAGATTCAAAAGTCAGCAATCTACAGGTATCTCC...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTATGGCCCTGGGCTTTaGCAAGCTGAGTTGTTCGAA +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIYGPGL*QAELFE
Trigger: TTCGAACAACTCAGCTTGCAAAAGCCCAGGGCCATA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCGAAGAGAACTTCCAGTaGGCAAACTACTGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: ISLINQLPETLPVKTTSSEENFQ*ANYWSH
Trigger: ATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTTC...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGTACCCAGCAAAGGGCTaGCATTATAATGATTTCTAC +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKYPAKG*HYNDFY
Trigger: GTAGAAATCATTATAATGCAAGCCCTTTGCTGGGTA...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGAAAAGGCAGTACATGTaGAGTCTAATTAACGACCTC +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKKRQYM*SLINDL
Trigger: GAGGTCGTTAATTAGACTCAACATGTACTGCCTTTT...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS TCA 90 bp ACAGTTGCCACAGAAAGGGATTTTCCATTCACCTTTCTTTCAAGATaGCAATTTGCTGTCGATCTCTCTTCAAGAAGAACAGCATCCCAA +
Preference number: 5 (lower is better)
Translates to: TVATERDFPFTFLSR*QFAVDLSSRRTASQ
Trigger: TTGGGATGCTGTTCTTCTTGAAGAGAGATCGACAGCAAATTGTCATCTTGAAAGAAAGGTGAATGGAAAATCCCTTTCTGTGGCAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS TCA 90 bp GAGTTCTTCAACAGGGTGTCATCACACGTAAAAGTAACTGGTAGCTaGAATCCTTCAATGTCAATGGAGACCTTCACACTAGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: EFFNRVSSHVKVTGS*NPSMSMETFTLAFS
Trigger: AGAAAATGCTAGTGTGAAGGTCTCCATTGACATTGAAGGATTTCAGCTACCAGTTACTTTTACGTGTGATGACACCCTGTTGAAGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS GCA 90 bp GTTCATGCTTCCAAAGCTCAAACATTCACTAGTTTACAAGTATGTTaGCGCAGTCAGCTGATACCATTTAACCGTCTCTTTGCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: VHASKAQTFTSLQVC*RSQLIPFNRLFAQV
Trigger: AACTTGAGCAAAGAGACGGTTAAATGGTATCAGCTGACTGCGGCAACATACTTGTAAACTAGTGAATGTTTGAGCTTTGGAAGCATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTACATCTTTTGCTCTTGTaGGTTCCGGATGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: SLINQLPETLPVKTTSSLHLLLL*VPDVKM
Trigger: CATCTTCACATCCGGAACCAACAAGAGCAAAAGATG...TAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACATTTTTCTGGTGCTGCTaGACAACTCAAAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTFFWCC*TTQSLS
Trigger: AGAGAGGCTTTGAGTTGTCAAGCAGCACCAGAAAAA...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTTTTCTGGTGCTGCTaGACAACTCAAAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ISLINQLPETLPVKTTSSFFWCC*TTQSLS
Trigger: AGAGAGGCTTTGAGTTGTCAAGCAGCACCAGAAAAA...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCGTGGGCATTCTTGGATaGAAGCCATTTTGGAATGCA +
Preference number: 5 (lower is better)
Translates to: TLPVKTTSSLREYNVSLIVGILG*KPFWNA
Trigger: TGCATTCCAAAATGGCTTCAATCCAAGAATGCCCAC...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAACTACTGGTCCCATTaGGGTCTTTCTGAGATATAT +
Preference number: 5 (lower is better)
Translates to: NQLPETLPVKTTSSLREYNYWSH*GLSEIY
Trigger: ATATATCTCAGAAAGACCCAAATGGGACCAGTAGTT...GTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGAAGAGAACTTCCAGTaGGCAAACTACTGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIEENFQ*ANYWSH
Trigger: ATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTTC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCGACACTCTTGCTACTTaGGGCACAGTCTGTAGGACT +
Preference number: 5 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFDTLAT*GTVCRT
Trigger: AGTCCTACAGACTGTGCCCAAAGTAGCAAGAGTGTC...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGTAGTCCATGCTTCCTaGACACTCTTGCTACTTTGG +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIVVHAS*TLLLLW
Trigger: CCAAAGTAGCAAGAGTGTCAAGGAAGCATGGACTAC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCAGAGGTAAAGAAACTTaGCCCAAAGCTTCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIRGKET*PKASGP
Trigger: GGGACCAGAAGCTTTGGGCAAAGTTTCTTTACCTCT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCCTGATCAGCAAATTTaGAATCAAGAAGTTCCAATG +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKPDQQI*NQEVPM
Trigger: CATTGGAACTTCTTGATTCAAAATTTGCTGATCAGG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAGTCTGTAGTTTGGGGTaGAAGTGCATCTCTAACGTA +
Preference number: 5 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTVCSLG*KCISNV
Trigger: TACGTTAGAGATGCACTTCAACCCCAAACTACAGAC...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATTGATAGTAGTAGTGCAAAGAGGCTCCACTCTACTTTTTGGTACGGGCTGAAGCATTTAACCGTCTCTTaGCTCAAGTTGAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: IDSSSAKRLHSTFWYGLKHLTVS*LKLKSF
Trigger: GAAAGATTTCAACTTGAGCAAAGAGACGGTTAAATG...CTTCAGCCCGTACCAAAAAGTAGAGTGGAGCCTCTTTGCACTACTACTATCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTGGACCCTAGAATTCTaGTCATGGGCCTCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIWTLEF*SWASCE
Trigger: TTCACAAGAGGCCCATGACAAGAATTCTAGGGTCCA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS TCA 90 bp GGATGTGAAGATGGACATTCTTTAAATCCGCTGTTGCTAGATATCTaGGCCATGTCCACTAAAAAGACCAAACCTTCCTTCCTCTATTTT +
Preference number: 5 (lower is better)
Translates to: GCEDGHSLNPLLLDI*AMSTKKTKPSFLYF
Trigger: AAAATAGAGGAAGGAAGGTTTGGTCTTTTTAGTGGACATGGCTCAGATATCTAGCAACAGCGGATTTAAAGAATGTCCATCTTCACATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532035.1
ENST00000533645.1
CDS-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCCACATCTTTTGCTCTaGTTGGTTCCGGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFPHLLL*LVPDVK
Trigger: CTTCACATCCGGAACCAACAAGAGCAAAAGATGTGG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp CTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTTTTCTCAAGTTCAGCTaGGGTGAGCTTTTCTACATC +
Preference number: 5 (lower is better)
Translates to: LPVKTTSSLREYNVSLISFLKFS*GELFYI
Trigger: GATGTAGAAAAGCTCACCCAAGCTGAACTTGAGAAA...AGAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACCCTTTGCTAGCAAACTaGAAACATTTTTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: NQLPETLPVKTTSSLREYPLLAN*KHFSLP
Trigger: AGGAAGAGAAAAATGTTTCAAGTTTGCTAGCAAAGG...GTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCCATCCCAAGGATCCTTaGCTAGCAAACTTGAAACAT +
Preference number: 5 (lower is better)
Translates to: TLPVKTTSSLREYNVSLIHPKDP*LANLKH
Trigger: ATGTTTCAAGTTTGCTAGCAAAGGATCCTTGGGATG...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATACAAATAGCCTGGGTTaGTGCGGTGATTGGTATATG +
Preference number: 5 (lower is better)
Translates to: NSSCKDYKLLKGIQCLTYTNSLG*CGDWYM
Trigger: CATATACCAATCACCGCACAAACCCAGGCTATTTGT...ATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTTTCTGCGTCTGTAGTTaGGGGTTGAAGTGCATCTCT +
Preference number: 5 (lower is better)
Translates to: TGYCRIISVLSLMILNPIFCVCS*GLKCIS
Trigger: AGAGATGCACTTCAACCCCAAACTACAGACGCAGAA...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCCTGATTGTCAGTCACTaGTCTATCCTTTTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: ISLINQLPETLPVKTTSSLIVSH*SILLQF
Trigger: AAACTGCAAAAGGATAGACAAGTGACTGACAATCAG...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATTGGATTGAAGCCATTTaGGAATGCAGCCTGTTTACT +
Preference number: 5 (lower is better)
Translates to: NSSCKDYKLLKGIQCLTYWIEAI*ECSLFT
Trigger: AGTAAACAGGCTGCATTCCAAAATGGCTTCAATCCA...ATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCGGAGATACCTGTAGATaGCTGACTTTTGAATCTGTT +
Preference number: 5 (lower is better)
Translates to: TLPVKTTSSLREYNVSLIGDTCR*LTFESV
Trigger: AACAGATTCAAAAGTCAGCAATCTACAGGTATCTCC...GATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCCATCCCAAGGATCCTTaGCTAGCAAACTTGAAACAT +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIHPKDP*LANLKH
Trigger: ATGTTTCAAGTTTGCTAGCAAAGGATCCTTGGGATG...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAAACTACTGGTCCCATTaGGGTCTTTCTGAGATATAT +
Preference number: 5 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTNYWSH*GLSEIY
Trigger: ATATATCTCAGAAAGACCCAAATGGGACCAGTAGTT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ATATCACTTATTAACCAACTGCCTGAAACTCTTCCTGTAAAGACTACAAGCTCCCTGTACTTCAACTTCTaGAAGAAGAGAACTTCCAGT +
Preference number: 5 (lower is better)
Translates to: ISLINQLPETLPVKTTSSLYFNF*KKRTSS
Trigger: ACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACAG...GGAGCTTGTAGTCTTTACAGGAAGAGTTTCAGGCAGTTGGTTAATAAGTGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTACAAATAGCCTGGGTTaGTGCGGTGATTGGTATATG +
Preference number: 5 (lower is better)
Translates to: TGYCRIISVLSLMILNPITNSLG*CGDWYM
Trigger: CATATACCAATCACCGCACAAACCCAGGCTATTTGT...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp TCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATCTCTACCCAGCAAAGGGCTaGCATTATAATGATTTCTAC +
Preference number: 5 (lower is better)
Translates to: SSCKDYKLLKGIQCLTYLYPAKG*HYNDFY
Trigger: GTAGAAATCATTATAATGCAAGCCCTTTGCTGGGTA...GAGATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATGCTGCCAACATCTACTaGATTCAAGTCATCATGTAC +
Preference number: 5 (lower is better)
Translates to: NSSCKDYKLLKGIQCLTYAANIY*IQVIMY
Trigger: GTACATGATGACTTGAATCAAGTAGATGTTGGCAGC...ATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCAGTGCAAGTTCTACATaGGGTTCCTCAGTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLISASST*GSSVEK
Trigger: TTTCTCTACTGAGGAACCCAATGTAGAACTTGCACT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS TCA 90 bp ATTTCTACAGTAGAACTCACATCACACGTAAAAGTAACTGGTAGCTaGAATCCTTCAATGTCAATGGAGACCTTCACACTAGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: ISTVELTSHVKVTGS*NPSMSMETFTLAFS
Trigger: AGAAAATGCTAGTGTGAAGGTCTCCATTGACATTGAAGGATTTCAGCTACCAGTTACTTTTACGTGTGATGTGAGTTCTACTGTAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS TCA 90 bp AAGCTCAAACATTCACTAGTTTACAAGTATGTTGCCGCAGTCAGCTaGTACCATTTAACCGTCTCTTTGCTCAAGTTGAAATCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: KLKHSLVYKYVAAVS*YHLTVSLLKLKSFK
Trigger: TTTGAAAGATTTCAACTTGAGCAAAGAGACGGTTAAATGGTATCAGCTGACTGCGGCAACATACTTGTAAACTAGTGAATGTTTGAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCCTGTACTTCAACTTCTaGAAGAAGAGAACTTCCAGT +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLILYFNF*KKRTSS
Trigger: ACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACAG...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTGCTGCCAACATCTACTaGATTCAAGTCATCATGTAC +
Preference number: 5 (lower is better)
Translates to: TGYCRIISVLSLMILNPIAANIY*IQVIMY
Trigger: GTACATGATGACTTGAATCAAGTAGATGTTGGCAGC...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCATCTACTGCTCGGTGTaGGTTTTCAATTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFIYCSV*VFNLKS
Trigger: GCTCTTCAAATTGAAAACCAACACCGAGCAGTAGAT...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp CAGAAACGAAGTGCCAGGGAAGCATATAAAGTTAAGGCACCATTATTTACAACAATGACATATCCTTTTTaGGTAACTGTTCCAGGAACA +
Preference number: 5 (lower is better)
Translates to: QKRSAREAYKVKAPLFTTMTYPF*VTVPGT
Trigger: TGTTCCTGGAACAGTTACCAAAAAAGGATATGTCAT...TGTTGTAAATAATGGTGCCTTAACTTTATATGCTTCCCTGGCACTTCGTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCCTTCGAAGCATTATATaGTCATTGTGTCGATCACAG +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLILRSII*SLCRSQ
Trigger: CTGTGATCGACACAATGACAATATAATGCTTCGAAG...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCAAAACAGAGACTTCCTaGATTCGACCATCTTGTCTA +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIKTETS*IRPSCL
Trigger: TAGACAAGATGGTCGAATCAAGGAAGTCTCTGTTTT...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCACTCTGCTACATCCGTaGAAGCATTCATCAAACTCT +
Preference number: 5 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFTLLHP*KHSSNS
Trigger: AGAGTTTGATGAATGCTTCAACGGATGTAGCAGAGT...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS TCA 90 bp CTTATTGTGAAGTTCCTGAAATTCGTCAAATGTTCGGAAGACAAATaGTGGTTCAATCTGTCCTTCCCTCAAAATTCGGACTACATAAAT +
Preference number: 5 (lower is better)
Translates to: LIVKFLKFVKCSEDK*WFNLSFPQNSDYIN
Trigger: ATTTATGTAGTCCGAATTTTGAGGGAAGGACAGATTGAACCATCATTTGTCTTCCGAACATTTGACGAATTTCAGGAACTTCACAATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS GCA 90 bp AGTAAAGAAAATTGTAGCTTCTGCGTCTGTAGTTTGGGGTTGAAGTaGATCTCTAACGTATTTCAAATCTTGAATACTTGTAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SKENCSFCVCSLGLK*ISNVFQILNTCKFW
Trigger: CCAGAACTTACAAGTATTCAAGATTTGAAATACGTTAGAGATGCACTTCAACCCCAAACTACAGACGCAGAAGCTACAATTTTCTTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCTGTAATGCTTCTTCTTaGTCCACATCTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLICNASS*STSFAL
Trigger: AAGAGCAAAAGATGTGGACAAAGAAGAAGCATTACA...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACTCTTCCTGTAAAGACTACAAGCTCCTTAAGGGAATACAATGTCTCACTTATTTTCAAGATGACAATTaGCTGTCGATCTCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: NSSCKDYKLLKGIQCLTYFQDDN*LSISLQ
Trigger: TTGAAGAGAGATCGACAGCAAATTGTCATCTTGAAA...ATAAGTGAGACATTGTATTCCCTTAAGGAGCTTGTAGTCTTTACAGGAAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS-3UTR CAA 90 bp ACTGGTTACTGTAGAATAATTTCAGTCCTGTCCCTTATGATTCTGAATCCAATTTACAGCTTTAATTACTaGATCTACTGCTCGGTGTTG +
Preference number: 5 (lower is better)
Translates to: TGYCRIISVLSLMILNPIYSFNY*IYCSVL
Trigger: CAACACCGAGCAGTAGATCAAGTAATTAAAGCTGTA...AATTGGATTCAGAATCATAAGGGACAGGACTGAAATTATTCTACAGTAACCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCCTTGATTCGACCATCTaGTCTAAAGGAGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLILDSTI*SKGVCF
Trigger: AAAACATACTCCTTTAGACAAGATGGTCGAATCAAG...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCAAACTGAATTGGCGATaGTCCTTTCTCTCTTGGTAT +
Preference number: 5 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFKLNWR*SFLSWY
Trigger: ATACCAAGAGAGAAAGGACAATCGCCAATTCAGTTT...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AACATGGAAATGAATGTATGGATTATGATAGTGGGGGTTCAGTCCTTTTTGATCGCAAATGGTGGTGCTTaGATCTGCATTTTAATTAAC +
Preference number: 5 (lower is better)
Translates to: NMEMNVWIMIVGVQSFLIANGGA*ICILIN
Trigger: GTTAATTAAAATGCAGATCAAAGCACCACCATTTGC...GATCAAAAAGGACTGAACCCCCACTATCATAATCCATACATTCATTTCCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS GCA 90 bp ATATGGAAATTTGGTCTTCAATTTTGTAATGGATCGACAAAAAGCTaGCATCTCCTCATTCTGTACTTCAACTTCTTGAAGAAGAGAACT +
Preference number: 5 (lower is better)
Translates to: IWKFGLQFCNGSTKS*HLLILYFNFLKKRT
Trigger: AGTTCTCTTCTTCAAGAAGTTGAAGTACAGAATGAGGAGATGGCAGCTTTTTGTCGATCCATTACAAAATTGAAGACCAAATTTCCATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCCCTTTGCTAGCAAACTaGAAACATTTTTCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFPLLAN*KHFSLP
Trigger: AGGAAGAGAAAAATGTTTCAAGTTTGCTAGCAAAGG...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS-3UTR CAA 90 bp AGACAGTTTACAAGACAAACTGGTCTACACAGACAAAGGTCTATATTAAAGTTCTGTCTTAGGGTTTCTTaGCTATATCCACTGTATACA +
Preference number: 5 (lower is better)
Translates to: RQFTRQTGLHRQRSILKFCLRVS*LYPLYT
Trigger: TGTATACAGTGGATATAGCAAAGAAACCCTAAGACA...GAACTTTAATATAGACCTTTGTCTGTGTAGACCAGTTTGTCTTGTAAACTGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CAA 72 bp AGCCTCATCCCGGCATGCATCGGTCTTTGGTCAGCCTaGTTGCCAGAGCGGGAATTTGAGGCTGACGCCAGC +
Preference number: 6 (lower is better)
Translates to: SLIPACIGLWSA*LPEREFEADAS
Trigger: GCTGGCGTCAGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS CAA 90 bp CGTCAATCCAGCCTCATCCCGGCATGCATCGGTCTTTGGTCAGCCTaGTTGCCAGAGCGGGAATTTGAGGCTGACGCCAGCTTGCGTCGA +
Preference number: 6 (lower is better)
Translates to: RQSSLIPACIGLWSA*LPEREFEADASLRR
Trigger: TCGACGCAAGCTGGCGTCAGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAGGCTGGATTGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS GCA 72 bp TCATCCCGGCATGCATCGGTCTTTGGTCAGCCTTGTTaGCAGAGCGGGAATTTGAGGCTGACGCCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: SSRHASVFGQPC*QSGNLRLTPAC
Trigger: GCAAGCTGGCGTCAGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS CAA 72 bp CTCATCCCGGCATGCATCGGTCTTTGGTCAGCCTTGTaGCCAGAGCGGGAATTTGAGGCTGACGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: LIPACIGLWSAL*PEREFEADASL
Trigger: CAAGCTGGCGTCAGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS CAA 90 bp CAATCCAGCCTCATCCCGGCATGCATCGGTCTTTGGTCAGCCTTGTaGCCAGAGCGGGAATTTGAGGCTGACGCCAGCTTGCGTCGAAAT +
Preference number: 6 (lower is better)
Translates to: QSSLIPACIGLWSAL*PEREFEADASLRRN
Trigger: ATTTCGACGCAAGCTGGCGTCAGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAGGCTGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS CCA 72 bp CGTCAATCCAGCCTCATCCCGGCATGCATCGGTCTTTaGTCAGCCTTGTTGCCAGAGCGGGAATTTGAGGCT +
Preference number: 6 (lower is better)
Translates to: RQSSLIPACIGL*SALLPEREFEA
Trigger: AGCCTCAAATTCCCGCTCTGGCAACAAGGCTGACCAAAGACCGATGCATGCCGGGATGAGGCTGGATTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS GCA 72 bp CAGCACTGCTTTATATATGTAGTCGAATCCTCAAGCTaGCTGAGCCTCCGCCTCTACCACAACCTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: QHCFIYVVESSS*LSLRLYHNLSR
Trigger: GCGGCTCAGGTTGTGGTAGAGGCGGAGGCTCAGGCAGCTTGAGGATTCGACTACATATATAAAGCAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503729.2
CDS GCA 72 bp TTTTCTTGTAGCTTCCAAAATAGCAAGGCCTCAAGCTaGCTGAGCCTCCGCCTCTACCACAACCTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: FSCSFQNSKASS*LSLRLYHNLSR
Trigger: GCGGCTCAGGTTGTGGTAGAGGCGGAGGCTCAGGCAGCTTGAGGCCTTGCTATTTTGGAAGCTACAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533645.1
CDS CAA 72 bp GTAAACTGGAGCTGCTCTGTTGTAGTCCATGCTTCCTaGACACTCTTGCTACTTTGGGCACAGTCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: VNWSCSVVVHAS*TLLLLWAQSVG
Trigger: TCCTACAGACTGTGCCCAAAGTAGCAAGAGTGTCAAGGAAGCATGGACTACAACAGAGCAGCTCCAGTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CAA 90 bp GCAAAAATAGTAAACTGGAGCTGCTCTGTTGTAGTCCATGCTTCCTaGACACTCTTGCTACTTTGGGCACAGTCTGTAGGACTCCTACCA +
Preference number: 6 (lower is better)
Translates to: AKIVNWSCSVVVHAS*TLLLLWAQSVGLLP
Trigger: TGGTAGGAGTCCTACAGACTGTGCCCAAAGTAGCAAGAGTGTCAAGGAAGCATGGACTACAACAGAGCAGCTCCAGTTTACTATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CAA 90 bp GGAACCAGCTCCACCATGCCTCGATCTCTGCCAGTTGAGAGACATTaGAAAATTACCATCCTCAGATCTAGTCCTTCTTTAAGCCAGATC +
Preference number: 6 (lower is better)
Translates to: GTSSTMPRSLPVERH*KITILRSSPSLSQI
Trigger: GATCTGGCTTAAAGAAGGACTAGATCTGAGGATGGTAATTTTCAAATGTCTCTCAACTGGCAGAGATCGAGGCATGGTGGAGCTGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS GCA 72 bp CTTTGGAGAACAACCTGTCTGGCTGATCCACTAGCCTaGCTTACTTTTTCTGCTACTCCTCCTAAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: LWRTTCLADPLA*LTFSATPPKSC
Trigger: ACAGCTTTTAGGAGGAGTAGCAGAAAAAGTAAGGCAGGCTAGTGGATCAGCCAGACAGGTTGTTCTCCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CAA 90 bp TGCAAGTGGTTTATCTTTAAAGGATCCTGTCACACCATATTCCACTaGGATTTTCCTGAGGGTATCGGAAGCAGGAACCAGCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: CKWFIFKGSCHTIFH*DFPEGIGSRNQLHH
Trigger: ATGGTGGAGCTGGTTCCTGCTTCCGATACCCTCAGGAAAATCCAAGTGGAATATGGTGTGACAGGATCCTTTAAAGATAAACCACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 90 bp GGATCGACAAAAAGCTGCCATCTCCTCATTCTGTACTTCAACTTCTaGAAGAAGAGAACTTCCAGTTGGCAAACTACTGGTCCCATTTGG +
Preference number: 6 (lower is better)
Translates to: GSTKSCHLLILYFNF*KKRTSSWQTTGPIW
Trigger: CCAAATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACAGAATGAGGAGATGGCAGCTTTTTGTCGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS CCA 72 bp CTTCTTGAAGAAGAGAACTTCCAGTTGGCAAACTACTaGTCCCATTTGGGTCTTTCTGAGATATATGGCCCT +
Preference number: 6 (lower is better)
Translates to: LLEEENFQLANY*SHLGLSEIYGP
Trigger: AGGGCCATATATCTCAGAAAGACCCAAATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTTCTTCAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS CCA 72 bp TTATCTTTAAAGGATCCTGTCACACCATATTCCACTTaGATTTTCCTGAGGGTATCGGAAGCAGGAACCAGC +
Preference number: 6 (lower is better)
Translates to: LSLKDPVTPYST*IFLRVSEAGTS
Trigger: GCTGGTTCCTGCTTCCGATACCCTCAGGAAAATCCAAGTGGAATATGGTGTGACAGGATCCTTTAAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS TCA 72 bp TTCTCCCGCAGAGATTCTGCACTGAGTACACTTAGTTaGAGTTCTCGCTGTCTTAGGGTTTCTTTGCTATAT +
Preference number: 6 (lower is better)
Translates to: FSRRDSALSTLS*SSRCLRVSLLY
Trigger: ATATAGCAAAGAAACCCTAAGACAGCGAGAACTTCAACTAAGTGTACTCAGTGCAGAATCTCTGCGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CCA 72 bp CTGTACTTCAACTTCTTGAAGAAGAGAACTTCCAGTTaGCAAACTACTGGTCCCATTTGGGTCTTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: LYFNFLKKRTSS*QTTGPIWVFLR
Trigger: TCTCAGAAAGACCCAAATGGGACCAGTAGTTTGCCAACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS CCA 72 bp GCTATCCCTTCAGCTTTCTCATCACGAAGTAAAGGGTaGAAGAAAGTACAAACAAGATCACACTCTGCTACA +
Preference number: 6 (lower is better)
Translates to: AIPSAFSSRSKG*KKVQTRSHSAT
Trigger: TGTAGCAGAGTGTGATCTTGTTTGTACTTTCTTCCACCCTTTACTTCGTGATGAGAAAGCTGAAGGGATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 72 bp CATTTGGGTCTTTCTGAGATATATGGCCCTGGGCTTTaGCAAGCTGAGTTGTTCGAATATTTAAAGACTGGC +
Preference number: 6 (lower is better)
Translates to: HLGLSEIYGPGL*QAELFEYLKTG
Trigger: GCCAGTCTTTAAATATTCGAACAACTCAGCTTGCAAAAGCCCAGGGCCATATATCTCAGAAAGACCCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS CAA 72 bp TCCACCATGCCTCGATCTCTGCCAGTTGAGAGACATTaGAAAATTACCATCCTCAGATCTAGTCCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: STMPRSLPVERH*KITILRSSPSL
Trigger: TAAAGAAGGACTAGATCTGAGGATGGTAATTTTCAAATGTCTCTCAACTGGCAGAGATCGAGGCATGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 72 bp TTTATCTTTAAAGGATCCTGTCACACCATATTCCACTaGGATTTTCCTGAGGGTATCGGAAGCAGGAACCAG +
Preference number: 6 (lower is better)
Translates to: FIFKGSCHTIFH*DFPEGIGSRNQ
Trigger: CTGGTTCCTGCTTCCGATACCCTCAGGAAAATCCAAGTGGAATATGGTGTGACAGGATCCTTTAAAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS TCA 72 bp TTTGTCCACATCTTTTGCTCTTGTTGGTTCCGGATGTaGAGATGGACATTCTTTAAATCCGCTGTTGCTAGA +
Preference number: 6 (lower is better)
Translates to: FVHIFCSCWFRM*RWTFFKSAVAR
Trigger: TCTAGCAACAGCGGATTTAAAGAATGTCCATCTTCACATCCGGAACCAACAAGAGCAAAAGATGTGGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265970.11
ENST00000532035.1
ENST00000533645.1
CDS TCA 72 bp GATGGACATTCTTTAAATCCGCTGTTGCTAGATATCTaGGCCATGTCCACTAAAAAGACCAAACCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: DGHSLNPLLLDI*AMSTKKTKPSF
Trigger: GAAGGAAGGTTTGGTCTTTTTAGTGGACATGGCTCAGATATCTAGCAACAGCGGATTTAAAGAATGTCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532035.1
ENST00000533645.1
CDS GCA 72 bp CCCATTTTTGGCTCACATATTTCTCATGTACAGCACTaGTTTATATATGTAGTCGAATCCTCAAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PIFGSHISHVQH*FIYVVESSSCL
Trigger: CAGGCAGCTTGAGGATTCGACTACATATATAAAGCAGTGCTGTACATGAGAAATATGTGAGCCAAAAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503729.2
CDS CAA 72 bp AAAAGCTGCCATCTCCTCATTCTGTACTTCAACTTCTaGAAGAAGAGAACTTCCAGTTGGCAAACTACTGGT +
Preference number: 6 (lower is better)
Translates to: KSCHLLILYFNF*KKRTSSWQTTG
Trigger: ACCAGTAGTTTGCCAACTGGAAGTTCTCTTCTTCAAGAAGTTGAAGTACAGAATGAGGAGATGGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS CAA 90 bp AGGTTCTGTAGATGGAAAAGTGGGCATTCTTGGATTGAAGCCATTTaGGAATGCAGCCTGTTTACTGTAAGTAGAAGGATAAATAGAAGG +
Preference number: 6 (lower is better)
Translates to: RFCRWKSGHSWIEAI*ECSLFTVSRRINRR
Trigger: CCTTCTATTTATCCTTCTACTTACAGTAAACAGGCTGCATTCCAAAATGGCTTCAATCCAAGAATGCCCACTTTTCCATCTACAGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS TCA 72 bp AAGTTCCTGAAATTCGTCAAATGTTCGGAAGACAAATaGTGGTTCAATCTGTCCTTCCCTCAAAATTCGGAC +
Preference number: 6 (lower is better)
Translates to: KFLKFVKCSEDK*WFNLSFPQNSD
Trigger: GTCCGAATTTTGAGGGAAGGACAGATTGAACCATCATTTGTCTTCCGAACATTTGACGAATTTCAGGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS TCA 72 bp CATTCACTAGTTTACAAGTATGTTGCCGCAGTCAGCTaGTACCATTTAACCGTCTCTTTGCTCAAGTTGAAA +
Preference number: 6 (lower is better)
Translates to: HSLVYKYVAAVS*YHLTVSLLKLK
Trigger: TTTCAACTTGAGCAAAGAGACGGTTAAATGGTATCAGCTGACTGCGGCAACATACTTGTAAACTAGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS GCA 72 bp TCCAAAGCTCAAACATTCACTAGTTTACAAGTATGTTaGCGCAGTCAGCTGATACCATTTAACCGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: SKAQTFTSLQVC*RSQLIPFNRLF
Trigger: AAAGAGACGGTTAAATGGTATCAGCTGACTGCGGCAACATACTTGTAAACTAGTGAATGTTTGAGCTTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CCA 72 bp GCATCTTTGAGAAGCCAATATAAATTGTGTGCTATCTaGATATTTCCCAATGCCCTGGACAAAAGGAATTGC +
Preference number: 6 (lower is better)
Translates to: ASLRSQYKLCAI*IFPNALDKRNC
Trigger: GCAATTCCTTTTGTCCAGGGCATTGGGAAATATCCAGATAGCACACAATTTATATTGGCTTCTCAAAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265970.11
CDS CAA 72 bp AGATGGAAAAGTGGGCATTCTTGGATTGAAGCCATTTaGGAATGCAGCCTGTTTACTGTAAGTAGAAGGATA +
Preference number: 6 (lower is better)
Translates to: RWKSGHSWIEAI*ECSLFTVSRRI
Trigger: TATCCTTCTACTTACAGTAAACAGGCTGCATTCCAAAATGGCTTCAATCCAAGAATGCCCACTTTTCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS CAA 72 bp CCTAGTAAAGAAAATTGTAGCTTCTGCGTCTGTAGTTaGGGGTTGAAGTGCATCTCTAACGTATTTCAAATC +
Preference number: 6 (lower is better)
Translates to: PSKENCSFCVCS*GLKCISNVFQI
Trigger: GATTTGAAATACGTTAGAGATGCACTTCAACCCCAAACTACAGACGCAGAAGCTACAATTTTCTTTACTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 90 bp CAGTCAAATTTACTGATATCCTCAGACTTTGGAGATACCTGTAGATaGCTGACTTTTGAATCTGTTATCTCCAAATCAGTCCTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: QSNLLISSDFGDTCR*LTFESVISKSVLAF
Trigger: GAAAGCAAGGACTGATTTGGAGATAACAGATTCAAAAGTCAGCAATCTACAGGTATCTCCAAAGTCTGAGGATATCAGTAAATTTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS CAA 90 bp GGTAACCCTGAAGGAATCATCTTTTCATATTCTTCTTCAGAGGGATaGTATTTCCTTAGCCACTCTGCAAGTGGTTTATCTTTAAAGGAT +
Preference number: 6 (lower is better)
Translates to: GNPEGIIFSYSSSEG*YFLSHSASGLSLKD
Trigger: ATCCTTTAAAGATAAACCACTTGCAGAGTGGCTAAGGAAATACAATCCCTCTGAAGAAGAATATGAAAAGATGATTCCTTCAGGGTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531428.1
CDS GCA 72 bp AAAAGTGGGCATTCTTGGATTGAAGCCATTTTGGAATaGAGCCTGTTTACTGTAAGTAGAAGGATAAATAGA +
Preference number: 6 (lower is better)
Translates to: KSGHSWIEAILE*SLFTVSRRINR
Trigger: TCTATTTATCCTTCTACTTACAGTAAACAGGCTGCATTCCAAAATGGCTTCAATCCAAGAATGCCCACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS GCA 72 bp TTTGGTCTTCAATTTTGTAATGGATCGACAAAAAGCTaGCATCTCCTCATTCTGTACTTCAACTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: FGLQFCNGSTKS*HLLILYFNFLK
Trigger: CTTCAAGAAGTTGAAGTACAGAATGAGGAGATGGCAGCTTTTTGTCGATCCATTACAAAATTGAAGACCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000533645.1
CDS GCA 72 bp AATTGTAGCTTCTGCGTCTGTAGTTTGGGGTTGAAGTaGATCTCTAACGTATTTCAAATCTTGAATACTTGT +
Preference number: 6 (lower is better)
Translates to: NCSFCVCSLGLK*ISNVFQILNTC
Trigger: ACAAGTATTCAAGATTTGAAATACGTTAGAGATGCACTTCAACCCCAAACTACAGACGCAGAAGCTACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 90 bp AAGCCTAGTAAAGAAAATTGTAGCTTCTGCGTCTGTAGTTTGGGGTaGAAGTGCATCTCTAACGTATTTCAAATCTTGAATACTTGTAAG +
Preference number: 6 (lower is better)
Translates to: KPSKENCSFCVCSLG*KCISNVFQILNTCK
Trigger: CTTACAAGTATTCAAGATTTGAAATACGTTAGAGATGCACTTCAACCCCAAACTACAGACGCAGAAGCTACAATTTTCTTTACTAGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 90 bp TTCAATAAGCCTAGTAAAGAAAATTGTAGCTTCTGCGTCTGTAGTTaGGGGTTGAAGTGCATCTCTAACGTATTTCAAATCTTGAATACT +
Preference number: 6 (lower is better)
Translates to: FNKPSKENCSFCVCS*GLKCISNVFQILNT
Trigger: AGTATTCAAGATTTGAAATACGTTAGAGATGCACTTCAACCCCAAACTACAGACGCAGAAGCTACAATTTTCTTTACTAGGCTTATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 72 bp AAAGAAAATTGTAGCTTCTGCGTCTGTAGTTTGGGGTaGAAGTGCATCTCTAACGTATTTCAAATCTTGAAT +
Preference number: 6 (lower is better)
Translates to: KENCSFCVCSLG*KCISNVFQILN
Trigger: ATTCAAGATTTGAAATACGTTAGAGATGCACTTCAACCCCAAACTACAGACGCAGAAGCTACAATTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CAA 72 bp AGAAAGTACAAACAAGATCACACTCTGCTACATCCGTaGAAGCATTCATCAAACTCTGTAAGTAACTGTTTA +
Preference number: 6 (lower is better)
Translates to: RKYKQDHTLLHP*KHSSNSVSNCL
Trigger: TAAACAGTTACTTACAGAGTTTGATGAATGCTTCAACGGATGTAGCAGAGTGTGATCTTGTTTGTACTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265970.11
ENST00000531428.1
CDS CCA 72 bp CTATTTGTACAAATAAACCTATGTGACTCCCATTTTTaGCTCACATATTTCTCATGTACAGCACTGCTTTAT +
Preference number: 6 (lower is better)
Translates to: LFVQINLCDSHF*LTYFSCTALLY
Trigger: ATAAAGCAGTGCTGTACATGAGAAATATGTGAGCCAAAAATGGGAGTCACATAGGTTTATTTGTACAAATAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503729.2