RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIGV (Homo sapiens)

Ensembl gene IDs: ENSG00000060642

Ensembl transcript IDs: ENST00000078527.9, ENST00000374145.6, ENST00000431541.6, ENST00000455364.2, ENST00000472757.5, ENST00000674202.1, ENST00000674222.1, ENST00000674273.1, ENST00000674317.1, ENST00000674335.1

Found 1122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAAATTCTCTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACCAGAAGCTCCAACAGAGGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: PNSLSCPSAGAMDGK*LLARLTRSSNRGCW
Trigger: CCAGCACCCTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAGAGAATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 90 bp AAATGCTTATTGGCCAGGCTGACCAGAAGCTCCAACAGAGGGTGCTaGGGCTCAGCCAGGAGCTTCCCTTCAGCTGGCAAGTTGAGCTTT +
Preference number: 1 (lower is better)
Translates to: KCLLARLTRSSNRGC*GSARSFPSAGKLSF
Trigger: AAAGCTCAACTTGCCAGCTGAAGGGAAGCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 90 bp GAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAATAAAGAGCTaGAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCT +
Preference number: 1 (lower is better)
Translates to: EESEEPSAPTSAIKS*NRTPTLPARKVEVS
Trigger: AGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 90 bp CAAACGGGGGCCAGGAAGCAGGGCAGATACCATTTCATTCCACCTTaGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGCC +
Preference number: 1 (lower is better)
Translates to: QTGARKQGRYHFIPP*TYVQFTNSCRRVGA
Trigger: GGCGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGGTATCTGCCCTGCTTCCTGGCCCCCGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 90 bp AGGGCAGGGGTGATCATCGTTTGCCAAGAAGGGCACTTGGTGTCTTaGCAGAAGGCAGAGGGCTGCCCTGATCTGTGTGTACATTTTCAG +
Preference number: 1 (lower is better)
Translates to: RAGVIIVCQEGHLVS*QKAEGCPDLCVHFQ
Trigger: CTGAAAATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCAAACGATGATCACCCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 90 bp TTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCTGAGAACGGCACAACAGGCACCTTA +
Preference number: 1 (lower is better)
Translates to: LPIPAAVLAPLTHVY*SSKQASENGTTGTL
Trigger: TAAGGTGCCTGTTGTGCCGTTCTCAGATGCCTGCTTACTTGATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 90 bp GCAGCAGCACTGCAGCGTGGACCACGTACACAAACACCTGAGGACTaGGGAATCCAAGATCGGGCTTCTCTAGGGTCTTATTGTTCTTGC +
Preference number: 1 (lower is better)
Translates to: AAALQRGPRTQTPED*GIQDRASLGSYCSC
Trigger: GCAAGAACAATAAGACCCTAGAGAAGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR TCA 90 bp CCAAACAGCAGCAGCACTGCAGCGTGGACCACGTACACAAACACCTaGGGACTGAGGAATCCAAGATCGGGCTTCTCTAGGGTCTTATTG +
Preference number: 1 (lower is better)
Translates to: PNSSSTAAWTTYTNT*GLRNPRSGFSRVLL
Trigger: CAATAAGACCCTAGAGAAGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR CCA 90 bp TGCAGCTGTTGGCAAGGAGAAAGGGAACAGTTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAGAAGGG +
Preference number: 1 (lower is better)
Translates to: CSCWQGEREQFLPTN*RDTRAGVIIVCQEG
Trigger: CCCTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTTCTCCTTGCCAACAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 90 bp TCCTACCTCGGCAATAAAGAGCTGAAACAGGACCCCAACACTTCCTaGACGCAAGGTGGAAGTCTCTGGATTTGCAGCTGTTGGCAAGGA +
Preference number: 1 (lower is better)
Translates to: SYLGNKELKQDPNTS*TQGGSLWICSCWQG
Trigger: TCCTTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGAGGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 90 bp CAACTAAATCCCTGCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATaGCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTG +
Preference number: 1 (lower is better)
Translates to: QLNPCKVREKTLSSS*QVHPPSWAPVTRFL
Trigger: CAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGCAGGGATTTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 90 bp CTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAAGGAGAAAGGGAACAGTTTCTGCCA +
Preference number: 1 (lower is better)
Translates to: LKQDPNTSCTQGGSL*ICSCWQGEREQFLP
Trigger: TGGCAGAAACTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 90 bp AGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTaGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTG +
Preference number: 1 (lower is better)
Translates to: REKTLSSSCQVHPPS*APVTRFLGMMRSSV
Trigger: CACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 90 bp GACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAAGTAAGCAGGCATCTGAGAACGGCA +
Preference number: 1 (lower is better)
Translates to: DLRTIYQFLPPCWRL*PMSTDQVSRHLRTA
Trigger: TGCCGTTCTCAGATGCCTGCTTACTTGATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 90 bp TCAGCAGGGGCCAGTGATCTTACTACCATTATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAAGCAGGGCAGATACCATTTCATTCC +
Preference number: 1 (lower is better)
Translates to: SAGASDLTTIIVIGS*PNGGQEAGQIPFHS
Trigger: GGAATGAAATGGTATCTGCCCTGCTTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTATAATGGTAGTAAGATCACTGGCCCCTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 90 bp AACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCTGTTaGCAAGGAGAAAGGGAACAGTTTCTGCCAACTAACTGGAGGGAC +
Preference number: 1 (lower is better)
Translates to: NTSCTQGGSLWICSC*QGEREQFLPTNWRD
Trigger: GTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 90 bp GTTTGCCAAGAAGGGCACTTGGTGTCTTGGCAGAAGGCAGAGGGCTaGCCTGATCTGTGTGTACATTTTCAGAAGCATTTGACTCTGAAC +
Preference number: 1 (lower is better)
Translates to: VCQEGHLVSWQKAEG*PDLCVHFQKHLTLN
Trigger: GTTCAGAGTCAAATGCTTCTGAAAATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 90 bp CCAAGAAGGGCACTTGGTGTCTTGGCAGAAGGCAGAGGGCTGCCCTaGTCTGTGTGTACATTTTCAGAAGCATTTGACTCTGAACCAAAT +
Preference number: 1 (lower is better)
Translates to: PRRALGVLAEGRGLP*SVCTFSEAFDSEPN
Trigger: ATTTGGTTCAGAGTCAAATGCTTCTGAAAATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 90 bp ATGATGAGATCTAGTGTGAAGGTTAAACTGAGACTGCCAGAGCAGTaGCATCACACCTACTCTGTGGGGTCTGAGTCACCTCTTCCAGTA +
Preference number: 1 (lower is better)
Translates to: MMRSSVKVKLRLPEQ*HHTYSVGSESPLPV
Trigger: TACTGGAAGAGGTGACTCAGACCCCACAGAGTAGGTGTGATGTCACTGCTCTGGCAGTCTCAGTTTAACCTTCACACTAGATCTCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 90 bp ACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTaGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTAC +
Preference number: 1 (lower is better)
Translates to: TLLLPLHCSGLYHLV*TVTSLSANAFDEIY
Trigger: GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp TCTCTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGCTCCAACAGAGGGTGCTGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: SLSCPSAGAMDGKCL*ARLTRSSNRGCWGS
Trigger: TGAGCCCCAGCACCCTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp AGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCAGAGGGCTGCCCTGATCTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: RDTRAGVIIVCQEGH*VSWQKAEGCPDLCV
Trigger: TACACACAGATCAGGGCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGGCTTATTGGCCAGGCTaGCCAGAAGCTCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMAYWPG*PEAPTE
Trigger: CTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGC...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GACCTCCAAACAGCAGCAGCACTGCAGCGTGGACCACGTACACAAACACCTGAGAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 2 (lower is better)
Translates to: DLQTAAALQRGPRTQTPERQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...CTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR GCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGACCCCAACACTTCCTaGACGCAAGGTGGAAGTCTC +
Preference number: 2 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFDPNTS*TQGGSL
Trigger: GAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGCCAAGAAGGGCACTTaGTGTCTTGGCAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLAAKKGT*CLGRRQ
Trigger: CTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGC...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp CCAAACGGGGGCCAGGAAGCAGGGCAGATACCATTTCATTCCACCTaGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGC +
Preference number: 2 (lower is better)
Translates to: PNGGQEAGQIPFHST*DLRTIYQFLPPCWR
Trigger: GCGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGGTATCTGCCCTGCTTCCTGGCCCCCGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp CAGCAGCACTGCAGCGTGGACCACGTACACAAACACCTGAGGACTGAGGAATCCCACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 2 (lower is better)
Translates to: QQHCSVDHVHKHLRTEESHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...GGATTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR GCA 90 bp GGGACCTTTTGTCCTGGTGGGGAGTCCTCTGCAAGAGGCTTCCAAGGCACAGTCGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 2 (lower is better)
Translates to: GTFCPGGESSARGFQGTVEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...GACTGTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGCTAGTGCTGGGGCGATaGATGGGAAATGCTTATTGG +
Preference number: 2 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLLVLGR*MGNAYW
Trigger: CCAATAAGCATTTCCCATCCATCGCCCCAGCACTAG...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GACCTCCAAACAGCAGCAGCACTGCAGCGTGGACCACGTACACAAACACCTGAGAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 2 (lower is better)
Translates to: DLQTAAALQRGPRTQTPERAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...CTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAATTCACCACCACCCCCTaGAGAATATCATCATTTCCC +
Preference number: 2 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQFTTTP*RISSFP
Trigger: GGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAA...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 2 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAA +
Preference number: 2 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFPCWRL*PMSTDQ
Trigger: TTGATCAGTAGACATGGGTCAGAGGCGCCAACACGG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCCAGAAGGCAGAGGGCTaGCCTGATCTGTGTGTACAT +
Preference number: 2 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSQKAEG*PDLCVH
Trigger: ATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTG...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATCCAGCTCATGCCAGGTaGACCCACCTAGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNPAHAR*THLAGL
Trigger: GAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGG...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGAGCTTCCCTTCAGCTaGCAAGTTGAGCTTTCTGTC +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLAELPFS*QVELSV
Trigger: GACAGAAAGCTCAACTTGCCAGCTGAAGGGAAGCTC...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTGCCAAGAAGGGCACTTaGTGTCTTGGCAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPAKKGT*CLGRRQ
Trigger: CTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGC...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGTTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: AETGPQHFLHARWKSLDLFLPTN*RDTRAG
Trigger: CCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAATGGATTTGCAGCTGTTaGCAAGGAGAAAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQWICSC*QGEREQ
Trigger: CTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCA...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTATCACACCTACTCTGTaGGGTCTGAGTCACCTCTTC +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLAITPTL*GLSHLF
Trigger: GAAGAGGTGACTCAGACCCCACAGAGTAGGTGTGAT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp CTCCTTAGAGAACAACTAAATCCCTGCAAGGTCAGAGAGAAAACCTaGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: LLREQLNPCKVREKT*SSSCQVHPPSWAPV
Trigger: AACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGCAGGGATTTAGTTGTTCTCTAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCTTCAGCTGGCAAGTTaGGCTTTCTGTCATGGTCAG +
Preference number: 2 (lower is better)
Translates to: AETGPQHFLHARWKSLDLLQLAS*AFCHGQ
Trigger: CTGACCATGACAGAAAGCTCAACTTGCCAGCTGAAG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTACACTAGGGCAGGGGTaGTCATCGTTTGCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVTLGQG*SSFAKK
Trigger: CTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGT...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCAGGAATAATCAGTCCTaGTTATCCCCCAAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFRNNQS*LSPKRR
Trigger: CCTCCTTTTGGGGGATAATCAGGACTGATTATTCCT...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGTCCCACTTTATTACTaGCACTACACTGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLAVPLYY*HYTVQA
Trigger: GGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCTTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGG +
Preference number: 2 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAATTACTCCCAAGAGTTaGACTCGGTGGAGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILITPKS*TRWRRS
Trigger: ACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAAT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGGAGCTTCCCTTCAGCTaGCAAGTTGAGCTTTCTGTC +
Preference number: 2 (lower is better)
Translates to: AETGPQHFLHARWKSLDLELPFS*QVELSV
Trigger: GACAGAAAGCTCAACTTGCCAGCTGAAGGGAAGCTC...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTTTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPFLPTN*RDTRAG
Trigger: CCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCTGGAAACCAGTACATAATAGGAGTGGAGGAGCCCAAAAACCTGGTGAGAACCAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 2 (lower is better)
Translates to: AGNQYIIGVEEPKNLVRTSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...GGTTCTCACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 2 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFTAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 2 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCTCAGCAGGGGCCAGTaGTCTTACTACCATTATAGT +
Preference number: 2 (lower is better)
Translates to: AETGPQHFLHARWKSLDLLSRGQ*SYYHYS
Trigger: ACTATAATGGTAGTAAGATCACTGGCCCCTGCTGAG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGCAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGCAGTGTGAAACGTCGTaGCTGGCCTGTATTATTTTT +
Preference number: 2 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMQCETS*LACIIF
Trigger: AAAAATAATACAGGCCAGGCACGACGTTTCACACTG...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTATTACTCCCAAGAGTTaGACTCGGTGGAGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVITPKS*TRWRRS
Trigger: ACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAAT...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTAACAGGCACCTTATCTaGCAGATGTTACTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLANRHLI*QMLLLS
Trigger: GGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTAAAGGGAACAGTTTCTaGCAACTAACTGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLAKGNSF*QLTGGT
Trigger: TGTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCCAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSQGGSL*ICSCWQ
Trigger: TTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTG...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCTTCCTGCACGCAAGGTaGAAGTCTCTGGATTTGCAG +
Preference number: 2 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFFLHAR*KSLDLQ
Trigger: CTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAA...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp AAGGCAGAGGGCTGCCCTGATCTGTGTGTACATTTTCAGAAGCATTaGACTCTGAACCAAATTCTCTCAGCTGTCCTAGTGCTGGGGCGA +
Preference number: 2 (lower is better)
Translates to: KAEGCPDLCVHFQKH*TLNQILSAVLVLGR
Trigger: TCGCCCCAGCACTAGGACAGCTGAGAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATGTACACACAGATCAGGGCAGCCCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAGCATTTAGACTGGGGTaGTTCTGTTGTTTAAGGCAG +
Preference number: 2 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILAFRLG*FCCLRQ
Trigger: CTGCCTTAAACAACAGAATCACCCCAGTCTAAATGC...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 2 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAACTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 2 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCTCGGCAATAAAGAGCTaGAACAGGACCCCAACACTT +
Preference number: 2 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFSAIKS*NRTPTL
Trigger: AAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGA...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTGGAAGTCTCTGGATTTaGAGCTGTTGGCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPGSLWI*SCWQGE
Trigger: TTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCC...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AGCTGGAAACCAGTACATAATAGGAGTGGAGGAGCCCAAAAACCTGGTGAGAACCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 2 (lower is better)
Translates to: SWKPVHNRSGGAQKPGENRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...GTTCTCACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAGGCATCACAAAGTGCTaGGATTACAGTGTGAAACGT +
Preference number: 2 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILGITKC*DYSVKR
Trigger: ACGTTTCACACTGTAATCCCAGCACTTTGTGATGCC...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp GCTGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTaGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTA +
Preference number: 2 (lower is better)
Translates to: AVALLGLRVNRKLPA*GPSCPSPRLLKRLL
Trigger: TAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGGTTTCTTCTAATTGCTaGAAACAGGAGAACTGGATA +
Preference number: 2 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLVSSNC*KQENWI
Trigger: TATCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAAC...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 2 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSTAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 2 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDTAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCATTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTCTCTCCCAAGTCACATaGCTGGTAAATGGGGTTTTA +
Preference number: 2 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVLSQVT*LVNGVL
Trigger: TAAAACCCCATTTACCAGCCATGTGACTTGGGAGAG...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLAHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: VQAYTILCGLLPACQLMPLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTGCATTTAGACTGGGGTaGTTCTGTTGTTTAAGGCAG +
Preference number: 2 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPAFRLG*FCCLRQ
Trigger: CTGCCTTAAACAACAGAATCACCCCAGTCTAAATGC...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGCCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAA +
Preference number: 2 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGPCWRL*PMSTDQ
Trigger: TTGATCAGTAGACATGGGTCAGAGGCGCCAACACGG...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGIVIGS*PNGGQE
Trigger: TTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTAT...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTGTCCCACTTTATTACTaGCACTACACTGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: KERPPKLLPRVALGGGGVVPLYY*HYTVQA
Trigger: GGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: VQAYTILCGLLPACQLMPLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLAVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTCATTTCATTCCACCTTaGACTTACGTACAATTTACC +
Preference number: 2 (lower is better)
Translates to: ARSERKPCPAHARCTHLAHFIPP*TYVQFT
Trigger: GGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTAGCCAAACTCTCGTCTaGCTCAAGGAATGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVSQTLV*LKEWAK
Trigger: TTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KERPPKLLPRVALGGGGVHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATGGCATCACAAAGTGCTaGGATTACAGTGTGAAACGT +
Preference number: 2 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHGITKC*DYSVKR
Trigger: ACGTTTCACACTGTAATCCCAGCACTTTGTGATGCC...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCCTCTCCCAAGTCACATaGCTGGTAAATGGGGTTTTA +
Preference number: 2 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSLSQVT*LVNGVL
Trigger: TAAAACCCCATTTACCAGCCATGTGACTTGGGAGAG...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCAGAGTTTCTGCTTACTaGATGTTTTGGCTTAAATGG +
Preference number: 2 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSRVSAY*MFWLKW
Trigger: CCATTTAAGCCAAAACATCCAGTAAGCAGAAACTCT...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTGCTGGGGCGATGGATaGGAAATGCTTATTGGCCAG +
Preference number: 2 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGCWGDG*EMLIGQ
Trigger: CTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCA...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp GTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAA +
Preference number: 2 (lower is better)
Translates to: VPLYYCHYTVQAYTI*CGLLPACQLMPLMK
Trigger: TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGATTCACCACCACCCCCTaGAGAATATCATCATTTCCC +
Preference number: 2 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGFTTTP*RISSFP
Trigger: GGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAA...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGACTCAGCAGGGGCCAGTaGTCTTACTACCATTATAGT +
Preference number: 2 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGLSRGQ*SYYHYS
Trigger: ACTATAATGGTAGTAAGATCACTGGCCCCTGCTGAG...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTCAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 2 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 2 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATCAGAAGGCAGAGGGCTaGCCTGATCTGTGTGTACAT +
Preference number: 2 (lower is better)
Translates to: KSLEPAHITFSDDSERVYQKAEG*PDLCVH
Trigger: ATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTG...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGACTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAACTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGAGGCATCACAAAGTGCTaGGATTACAGTGTGAAACGT +
Preference number: 2 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGGITKC*DYSVKR
Trigger: ACGTTTCACACTGTAATCCCAGCACTTTGTGATGCC...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGACTCTCCCAAGTCACATaGCTGGTAAATGGGGTTTTA +
Preference number: 2 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGLSQVT*LVNGVL
Trigger: TAAAACCCCATTTACCAGCCATGTGACTTGGGAGAG...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAAGAGTTTCTGCTTACTaGATGTTTTGGCTTAAATGG +
Preference number: 2 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQRVSAY*MFWLKW
Trigger: CCATTTAAGCCAAAACATCCAGTAAGCAGAAACTCT...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCTTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAFLPTN*RDTRAG
Trigger: CCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 90 bp CTTTCCCTCATTGAAAGGAAAGACCACCTAAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGG +
Preference number: 2 (lower is better)
Translates to: LSLIERKDHLNYSQE*HSVEEEFLLIAENR
Trigger: CCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTCAATGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTATTACCCATCTGTTTTaGAGAGTTTCTGCTTACTGG +
Preference number: 2 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVITHLF*RVSAYW
Trigger: CCAGTAAGCAGAAACTCTTCAAAACAGATGGGTAAT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AGCTGGAAACCAGTACATAATAGGAGTGGAGGAGCCCAAAAACCTGGTGAGAACAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 2 (lower is better)
Translates to: SWKPVHNRSGGAQKPGENNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...GTTCTCACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATCTAGTGCTGGGGCGATaGATGGGAAATGCTTATTGG +
Preference number: 2 (lower is better)
Translates to: KSLEPAHITFSDDSERVYLVLGR*MGNAYW
Trigger: CCAATAAGCATTTCCCATCCATCGCCCCAGCACTAG...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACAGTGTGAAACGTCGTaGCTGGCCTGTATTATTTTT +
Preference number: 2 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPQCETS*LACIIF
Trigger: AAAAATAATACAGGCCAGGCACGACGTTTCACACTG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTTCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVSARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: KETVNRMVKGQLLVIKSALCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCAAAGGGAACAGTTTCTaGCAACTAACTGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAKGNSF*QLTGGT
Trigger: TGTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTT...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATCAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: KSLEPAHITFSDDSERVYQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCTCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: KETVNRMVKGQLLVIKSASARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR GCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATTCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: KSLEPAHITFSDDSERVYSARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR TCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATGGTCTCAGAAGGAAATaGCTTTTCTCTGAAACTGTA +
Preference number: 2 (lower is better)
Translates to: KSLEPAHITFSDDSERVYGLRRK*LFSETV
Trigger: TACAGTTTCAGAGAAAAGTCATTTCCTTCTGAGACC...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 72 bp CTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTaGCCAGAAGCTCCAACAGAGGGTGCTGGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: LGRWMGNAYWPG*PEAPTEGAGAQ
Trigger: CTGAGCCCCAGCACCCTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAACGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAACGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 72 bp GCAGAGCCAAGGGTGAGTGGTCACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGCCACTGGTGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: AEPRVSGHVCPS*PGNQYSHWCSQ
Trigger: CTGGCTGCACCAGTGGCTATACTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTGGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR TCA 72 bp CCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCTGAGAACGGCACAACA +
Preference number: 3 (lower is better)
Translates to: PAAVLAPLTHVY*SSKQASENGTT
Trigger: TGTTGTGCCGTTCTCAGATGCCTGCTTACTTGATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 72 bp CCCTGCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATaGCAGGTGCACCCACCTAGCTGGGCTCCTGTTACA +
Preference number: 3 (lower is better)
Translates to: PCKVREKTLSSS*QVHPPSWAPVT
Trigger: TGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAACGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 3 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFDGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTTGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: ARSERKPCPAHARCTHLACQEGH*VSWQKA
Trigger: TGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCA...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 72 bp AGCAGCACTGCAGCGTGGACCACGTACACAAACACCTaGGGACTGAGGAATCCAAGATCGGGCTTCTCTAGG +
Preference number: 3 (lower is better)
Translates to: SSTAAWTTYTNT*GLRNPRSGFSR
Trigger: CCTAGAGAAGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR GCA 72 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACCAGAAGCTCCAACAGA +
Preference number: 3 (lower is better)
Translates to: LSCPSAGAMDGK*LLARLTRSSNR
Trigger: TCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp ACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTaGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGA +
Preference number: 3 (lower is better)
Translates to: TLSSSCQVHPPS*APVTRFLGMMR
Trigger: TCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAACAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 3 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTAGGGGTGATCATCGTTaGCCAAGAAGGGCACTTGGT +
Preference number: 3 (lower is better)
Translates to: ARSERKPCPAHARCTHLARGDHR*PRRALG
Trigger: ACCAAGTGCCCTTCTTGGCAAACGATGATCACCCCT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGAAGTCTCTGGATTaGCAGCTGTTGGCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFWKSLD*QLLARR
Trigger: TCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCA...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 72 bp AGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTaGACCCACCTAGCTGGGCTCCTGTTACAAGGTTTC +
Preference number: 3 (lower is better)
Translates to: RSERKPCPAHAR*THLAGLLLQGF
Trigger: GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp GTGATCATCGTTTGCCAAGAAGGGCACTTGGTGTCTTaGCAGAAGGCAGAGGGCTGCCCTGATCTGTGTGTA +
Preference number: 3 (lower is better)
Translates to: VIIVCQEGHLVS*QKAEGCPDLCV
Trigger: TACACACAGATCAGGGCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCAAACGATGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp GACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAAGGAGAAAGGGAACAG +
Preference number: 3 (lower is better)
Translates to: DPNTSCTQGGSL*ICSCWQGEREQ
Trigger: CTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTaGAAGTCTCTGGATTTGCAGCTGTTGGCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: AETGPQHFLHAR*KSLDLQLLARR
Trigger: TCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp TCCCATGATAGGATTTCTGGGGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGGCTTCCAAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: SHDRISGDLLSW*GVLCKRLPRHS
Trigger: ACTGTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAATCCTATCATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR TCA 72 bp CTGCAGCGTGGACCACGTACACAAACACCTGAGGACTaGGGAATCCAAGATCGGGCTTCTCTAGGGTCTTAT +
Preference number: 3 (lower is better)
Translates to: LQRGPRTQTPED*GIQDRASLGSY
Trigger: ATAAGACCCTAGAGAAGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CAA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCACAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 3 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp GACCTCCAAACAGCAGCAGCACTGCAGCGTGGACCACGTACACAAACACCTGAGTTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 3 (lower is better)
Translates to: DLQTAAALQRGPRTQTPEFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...CTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGGAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CAA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 3 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQTGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPNYSQE*HSVEEE
Trigger: CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATT...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 72 bp ACAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAAGTAAGCAGGCATCTG +
Preference number: 3 (lower is better)
Translates to: TIYQFLPPCWRL*PMSTDQVSRHL
Trigger: CAGATGCCTGCTTACTTGATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 72 bp GCCAGTGATCTTACTACCATTATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAAGCAGGGCAGATACCA +
Preference number: 3 (lower is better)
Translates to: ASDLTTIIVIGS*PNGGQEAGQIP
Trigger: TGGTATCTGCCCTGCTTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTATAATGGTAGTAAGATCACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 72 bp ATTCCACCTTGGACTTACGTACAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCTGACCCATGTCTACTG +
Preference number: 3 (lower is better)
Translates to: IPPWTYVQFTNS*RRVGASDPCLL
Trigger: CAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 72 bp GAAGGGCACTTGGTGTCTTGGCAGAAGGCAGAGGGCTaGCCTGATCTGTGTGTACATTTTCAGAAGCATTTG +
Preference number: 3 (lower is better)
Translates to: EGHLVSWQKAEG*PDLCVHFQKHL
Trigger: CAAATGCTTCTGAAAATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR GCA 72 bp GGCAATAAAGAGCTGAAACAGGACCCCAACACTTCCTaGACGCAAGGTGGAAGTCTCTGGATTTGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: GNKELKQDPNTS*TQGGSLWICSC
Trigger: ACAGCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 3 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CTGAGGAATCCAAGATCGGGCTTCTCTAGGGTCTTATTGTTCTTGCTCCTTTGCGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 3 (lower is better)
Translates to: LRNPRSGFSRVLLFLLLCAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...GCAAAGGAGCAAGAACAATAAGACCCTAGAGAAGCCCGATCTTGGATTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR TCA 72 bp GCACTTGGTGTCTTGGCAGAAGGCAGAGGGCTGCCCTaGTCTGTGTGTACATTTTCAGAAGCATTTGACTCT +
Preference number: 3 (lower is better)
Translates to: ALGVLAEGRGLP*SVCTFSEAFDS
Trigger: AGAGTCAAATGCTTCTGAAAATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp GCCAGGAAGCAGGGCAGATACCATTTCATTCCACCTTaGACTTACGTACAATTTACCAATTCCTGCCGCCGT +
Preference number: 3 (lower is better)
Translates to: ARKQGRYHFIPP*TYVQFTNSCRR
Trigger: ACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGGTATCTGCCCTGCTTCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp ATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATaGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTA +
Preference number: 3 (lower is better)
Translates to: MIQSQTLVWLKE*AKVAQQGPVIL
Trigger: TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp TCTCAACAGCGGCTCTTGATCCTGAAGCAAGTGAGCTaGAAACCAGTACATAATAGGAGTGGAGGAGCCCAA +
Preference number: 3 (lower is better)
Translates to: SQQRLLILKQVS*KPVHNRSGGAQ
Trigger: TTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CAA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: KWSHFITATTLFRPIPSCDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 3 (lower is better)
Translates to: QFTNSCRRVGASDPCLLITGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 3 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNDGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp CTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTaGACTGTTACCAGCCTGTCAGCTAATGCCTTTGAT +
Preference number: 3 (lower is better)
Translates to: LPLHCSGLYHLV*TVTSLSANAFD
Trigger: ATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: KSLEPAHITFSDDSERVYDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 3 (lower is better)
Translates to: ARSERKPCPAHARCTHLARCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 3 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCATTTTCAGAAGCATTaGACTCTGAACCAAATTCTC +
Preference number: 3 (lower is better)
Translates to: AETGPQHFLHARWKSLDLHFQKH*TLNQIL
Trigger: GAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCTGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: KETVNRMVKGQLLVIKSACQEGH*VSWQKA
Trigger: TGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCA...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CCA 72 bp AGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGT +
Preference number: 3 (lower is better)
Translates to: RQFQCVFLLSDP*VKLASNLSLES
Trigger: ACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 3 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 3 (lower is better)
Translates to: KETVNRMVKGQLLVIKSADGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAACATTTTCAGAAGCATTaGACTCTGAACCAAATTCTC +
Preference number: 3 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQHFQKH*TLNQIL
Trigger: GAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATG...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 72 bp CCACTGGTGCAGCCAGTAGAAAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAAAGCCAACATTCCAGT +
Preference number: 3 (lower is better)
Translates to: PLVQPVENWAPA*AHSISKSQHSS
Trigger: ACTGGAATGTTGGCTTTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGCACCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CAA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTGATTACCCATCTGTTTaGAAGAGTTTCTGCTTACTG +
Preference number: 3 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVDYPSV*KSFCLL
Trigger: CAGTAAGCAGAAACTCTTCAAAACAGATGGGTAATC...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATCTGGATTTGCAGCTGTaGGCAAGGAGAAAGGGAACA +
Preference number: 3 (lower is better)
Translates to: KSLEPAHITFSDDSERVYLDLQL*ARRKGT
Trigger: TGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAG...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 72 bp GCCAGTAAGTCAGGAAGTAGCCTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCCAGTGATACAAAAGTC +
Preference number: 3 (lower is better)
Translates to: ASKSGSSLECIV*LENRFSSDTKV
Trigger: GACTTTTGTATCACTGGAAAACCTGTTCTCCAGTCACACGATACATTCTAGGCTACTTCCTGACTTACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR-3UTR CAA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 3 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 3 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVTGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 3 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 3 (lower is better)
Translates to: YTILCGLLPACQLMPLMKRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR-3UTR CAA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 3 (lower is better)
Translates to: KSLEPAHITFSDDSERVYRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR TCA 72 bp AAATTCCAATTCTTGAGGCTTTCCAGAAGCTGCTTATaGTTACCCATCTGTTTTGAAGAGTTTCTGCTTACT +
Preference number: 3 (lower is better)
Translates to: KFQFLRLSRSCL*LPICFEEFLLT
Trigger: AGTAAGCAGAAACTCTTCAAAACAGATGGGTAATCATAAGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAACTGGAGAAGTCGCTCTaGCCCAGGGTCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQLEKSL*PRVLRA
Trigger: GGCTCTGAGGACCCTGGGTCAGAGCGACTTCTCCAG...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCACTCCCGAGGGAGCCTaGAGAGCCCCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSTPEGA*RAPPGH
Trigger: GTGGCCTGGTGGGGCTCTGCAGGCTCCCTCGGGAGT...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674273.1
CDS-3UTR GCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGCCAGCTCATGCCAGGTaGACCCACCTAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMPAHAR*THLAGL
Trigger: GAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGG...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGCAGCACTGCAGCGTGGACCACGTACACAAACACCTGAGGACTGAGGAATCCCCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QQHCSVDHVHKHLRTEESPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...GGATTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAACTACCGGCTTCCATTTaGCAGCTTCCCTCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQLPASI*QLPSRQ
Trigger: CTGGCGGGAGGGAAGCTGTCAAATGGAAGCCGGTAG...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS-3UTR GCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLARPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTACCCCCTGCGCAGGCTaGAGAAGTCGCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLATPCAG*RSRSDP
Trigger: TGGGTCAGAGCGACTTCTCCAGCCTGCGCAGGGGGT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGGGGCACTTGGTGTCTTaGCAGAAGGCAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLGHLVS*QKAEGC
Trigger: GCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCC...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGGGCACTTGGTGTCTTaGCAGAAGGCAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFGHLVS*QKAEGC
Trigger: GCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATGCACAGACCTCCAAACAGCAGCAGCACTGCAGCGTGGACCACGTACACAAACAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: MHRPPNSSSTAAWTTYTNRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...GTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGGAGGTCTGTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGTCCGAGCCAGGATTATaGCCCAGGTCACCCAAACGC +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLSEPGL*PRSPKR
Trigger: GCGTTTGGGTGACCTGGGTCATAATCCTGGCTCGGA...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQRPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIRPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGACTCCCGAGGGAGCCTaGAGAGCCCCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEETPEGA*RAPPGH
Trigger: GTGGCCTGGTGGGGCTCTGCAGGCTCCCTCGGGAGT...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674273.1
CDS-3UTR GCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAGGCCTCGTGGGGGCTaGCTTCTGTCAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSARPRGG*LLSAQP
Trigger: CGGCTGGGCTGACAGAAGGCAGCCCCCACGAGGCCT...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGAAGACTAACACCCCCTaGGCAGGCTGGAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLKTNTP*AGWRSR
Trigger: GCGACTTCTCCAGCCTGCGCAGGGGGTGTTAGTCTT...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGTTCCGGGATGGGTCCTaGGGCCACATCCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMFRDGS*GHILSP
Trigger: TGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAA...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp AAGGCAGAGCCAAGGGTGAGTGGTCACGTATGTCCAAGTTGCCCAGGCAACCAGTTCCGGGATGGGTCCTaGGGCCACATCCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: KAEPRVSGHVCPSCPGNQFRDGS*GHILSP
Trigger: TGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAA...CTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTGGCTCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAACTGGCCGGCTCCTTTTaGACACAGTCCCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQLAGSF*TQSLLG
Trigger: ACCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAG...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR TCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLAAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGGCTTATTGGCCAGGCTaGCCAGAAGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLAYWPG*PEAPTE
Trigger: CTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGC...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCACAGACCTCCAAACAGCAGCAGCACTGCAGCGTGGACCACGTACACAAACACTGTTGCTACCAGGATTaGGCTCCCTCAGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: AQTSKQQQHCSVDHVHKHCCYQD*APSGLS
Trigger: TGAGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...GTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGGAGGTCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAGACTGGTGGGGACAGTaGAAAACCAGACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQDWWGQ*KTRQPR
Trigger: CCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTC...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVRPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAGGCAGAGCCAAGGGTGAGTGGTCACGTATGTCCAAGTTGCCCAGGCAACCAGAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: KAEPRVSGHVCPSCPGNQKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...CTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTGGCTCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCCAGCTCATGCCAGGTaGACCCACCTAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPPAHAR*THLAGL
Trigger: GAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGG...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTACCTTGTCCAGCTCATaGCAGGTGCACCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLATLSSS*QVHPPS
Trigger: GCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCTGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLICSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFRQPRS*SATAAN
Trigger: GTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCT...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAGGCAGAGCCAAGGGTGAGTGGTCACGTATGTCCAAGTTGCCCAGGCAACCAGCAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: KAEPRVSGHVCPSCPGNQQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...CTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTGGCTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFIVIGS*PNGGQE
Trigger: TTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTAT...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGGCAGAGGGCTGCCCTaGTCTGTGTGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFGRGLP*SVCTFS
Trigger: TGAAAATGTACACACAGATCAGGGCAGCCCTCTGCC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPRPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GGTCACGTATGTCCAAGTTGCCCAGGCAACCAGTATAGCCACTGGTGCAGCCAGCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GHVCPSCPGNQYSHWCSQRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...CTGGCTGCACCAGTGGCTATACTGGTTGCCTGGGCAACTTGGACATACGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAACGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGCAGAAGGCAGAGGGCTaGCCTGATCTGTGTGTACAT +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLQKAEG*PDLCVH
Trigger: ATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTG...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAGACCCCAACACTTCCTaGACGCAAGGTGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQDPNTS*TQGGSL
Trigger: GAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTC...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTCCAGCTCATGCCAGGTaGACCCACCTAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAPAHAR*THLAGL
Trigger: GAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGG...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTCTGTCTCAGAGTCAGTaGTCTTGCCCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVLSQSQ*SCPSSR
Trigger: GCGGGAGCTGGGGCAAGAGCACTGACTCTGAGACAG...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674335.1
CDS-3UTR CCA 90 bp GCTGGAAACCAGTACATAATAGGAGTGGAGGAGCCCAAAAACCTGGTGAGAACCCACCTCCTTCCGGGATaGGTCCTGGGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: AGNQYIIGVEEPKNLVRTHLLPG*VLGPHP
Trigger: AGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTG...GGTTCTCACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGCACCTCCTTCCGGGATaGGTCCTGGGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEHLLPG*VLGPHP
Trigger: AGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTG...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTCCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGAGCCAAAGGCCTCGTaGGGGCTGCCTTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPEPKAS*GLPSVS
Trigger: GCTGACAGAAGGCAGCCCCCACGAGGCCTTTGGCTC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGGTTGAACGGCAGCTCTaGACCCTCTGGGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLVERQL*TLWVRL
Trigger: TAGTCTTACCCAGAGGGTCCAGAGCTGCCGTTCAAC...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGTGCTGGGGCGATGGATaGGAAATGCTTATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLCWGDG*EMLIGQ
Trigger: CTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCA...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAATTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQFLPTN*RDTRAG
Trigger: CCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGTTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLFLPTN*RDTRAG
Trigger: CCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTTGTTGCTACCAGGATTaGGCTCCCTCAGGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLACCYQD*APSGLD
Trigger: ATCTAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR TCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATGCTTATTGGCCAGGCTaGCCAGAAGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDAYWPG*PEAPTE
Trigger: CTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGC...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAACACTAGGGCAGGGGTaGTCATCGTTTGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQTLGQG*SSFAKK
Trigger: CTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGT...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGTGTTGCTACCAGGATTaGGCTCCCTCAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQCCYQD*APSGLL
Trigger: AAGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS-3UTR GCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGGACTGGTGGGGACAGTaGAAAACCAGACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLDWWGQ*KTRQPR
Trigger: CCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTC...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAGACTGGTGGGGACAGTaGAAAACCAGACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILDWWGQ*KTRQPR
Trigger: CCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTC...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWRPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTCCAAGTTGCCCAGGCAACCAGTATAGCCACTGGTGCAGCCAGTAGAAAATTGTGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VQVAQATSIATGAASRKLWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...CAATTTTCTACTGGCTGCACCAGTGGCTATACTGGTTGCCTGGGCAACTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCAGCCCAGTACTTCCATaGCGCAGCCTGCCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFSPVLP*RSLPLL
Trigger: TAGCAAGGGCAGGCTGCGGCATGGAAGTACTGGGCT...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGTTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGATTACTCCCAAGAGTTaGACTCGGTGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLITPKS*TRWRRS
Trigger: ACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAAT...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLAAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATCCAGCTCATGCCAGGTaGACCCACCTAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHPAHAR*THLAGL
Trigger: GAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGG...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCCACCTCCTTCCGGGATaGGTCCTGGGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSHLLPG*VLGPHP
Trigger: AGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTG...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAATGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GGTCACGTATGTCCAAGTTGCCCAGGCAACCAGTATAGCCACTGGTGCAGCCAGAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GHVCPSCPGNQYSHWCSQRAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...CTGGCTGCACCAGTGGCTATACTGGTTGCCTGGGCAACTTGGACATACGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLLPTCP*RVQVMS
Trigger: GGACATGACCTGGACTCTCCAGGGACAGGTTGGAAG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGGTCTGGCTCAAGGAATaGGCAAAAGTAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMVWLKE*AKVAQQ
Trigger: CTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGAC...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAGTCTGGCTCAAGGAATaGGCAAAAGTAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQVWLKE*AKVAQQ
Trigger: CTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGAC...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCGCCAAGAAGGGCACTTaGTGTCTTGGCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSAKKGT*CLGRRQ
Trigger: CTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGC...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEECSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGAGACATTGGCAGGGCTaGGACAGAAAAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQRHWQG*DRKAEL
Trigger: CAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAAGACATTGGCAGGGCTaGGACAGAAAAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILRHWQG*DRKAEL
Trigger: CAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCAGACATTGGCAGGGCTaGGACAGAAAAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSRHWQG*DRKAEL
Trigger: CAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCT...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ACCAGTATAGCCACTGGTGCAGCCAGTAGAAAATTGGGCACCTGCTTGAGCTCAAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSIATGAASRKLGTCLSSRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGCACCAGTGGCTATACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLANLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATCTGGAGAAGTCGCTCTaGCCCAGGGTCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNLEKSL*PRVLRA
Trigger: GGCTCTGAGGACCCTGGGTCAGAGCGACTTCTCCAG...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTTCACCACCACCCCCTaGAGAATATCATCATTTCCC +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFFTTTP*RISSFP
Trigger: GGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAA...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGCTCAGCAGGGGCCAGTaGTCTTACTACCATTATAGT +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMLSRGQ*SYYHYS
Trigger: ACTATAATGGTAGTAAGATCACTGGCCCCTGCTGAG...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGACACTAGGGCAGGGGTaGTCATCGTTTGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLTLGQG*SSFAKK
Trigger: CTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGT...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAAAATCAGCAGGCAACTaGGTAGACTCAGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQKSAGN*VDSVTP
Trigger: GGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTT...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAATCCAAGGCAGGAAGTTaGAATGTAGGAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQSKAGS*NVGVVP
Trigger: TGGGACTACTCCTACATTGCAACTTCCTGCCTTGGA...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGTCCAAGGCAGGAAGTTaGAATGTAGGAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLSKAGS*NVGVVP
Trigger: TGGGACTACTCCTACATTGCAACTTCCTGCCTTGGA...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTACTCCCGAGGGAGCCTaGAGAGCCCCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEITPEGA*RAPPGH
Trigger: GTGGCCTGGTGGGGCTCTGCAGGCTCCCTCGGGAGT...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674273.1
CDS-3UTR GCA 90 bp CTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTAACTCCCGAGGGAGCCTaGAGAGCCCCACCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LYYCHYTVQAYTILCGLLTPEGA*RAPPGH
Trigger: GTGGCCTGGTGGGGCTCTGCAGGCTCCCTCGGGAGT...TAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674273.1
CDS-3UTR GCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGAGGCCTCGTGGGGGCTaGCTTCTGTCAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGRPRGG*LLSAQP
Trigger: CGGCTGGGCTGACAGAAGGCAGCCCCCACGAGGCCT...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACAGGCCTCGTGGGGGCTaGCTTCTGTCAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNRPRGG*LLSAQP
Trigger: CGGCTGGGCTGACAGAAGGCAGCCCCCACGAGGCCT...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374145.6
ENST00000674273.1
CDS-3UTR GCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGGTCCCACTTTATTACTaGCACTACACTGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLVPLYY*HYTVQA
Trigger: GGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGGGGGTGATCATCGTTTaGCAAGAAGGGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLGVIIV*QEGHLV
Trigger: CACCAAGTGCCCTTCTTGGCAAACGATGATCACCCC...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCAAACAGGAAACTTCCTaGCTTGGGTCCTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFKQETS*LGSFMS
Trigger: GGACATGAAGGACCCAAGGCAGGAAGTTTCCTGTTT...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAACCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ACCAGTATAGCCACTGGTGCAGCCAGTAGAAAATTGGGCACCTGCTTGAGCTCAGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TSIATGAASRKLGTCLSSDLLSW*GVLCKR
Trigger: CCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTC...TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGCACCAGTGGCTATACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCTGCTGGGGCGATGGATaGGAAATGCTTATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSCWGDG*EMLIGQ
Trigger: CTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCA...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTGGGCACTTGGTGTCTTaGCAGAAGGCAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVGHLVS*QKAEGC
Trigger: GCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCC...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGTGGATTTGCAGCTGTTaGCAAGGAGAAAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLWICSC*QGEREQ
Trigger: CTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCA...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGCAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLQGGSL*ICSCWQ
Trigger: TTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTG...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGGCCTCTCTGCCACTTaGCCATGCTTGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAGLSAT*PCLHSS
Trigger: GGAAGAATGCAAGCATGGTCAAGTGGCAGAGAGGCC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000078527.9
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTCAGGATACGGCAGCTaGCTGCAAACCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPSGYGS*LQTSAP
Trigger: AGGTGCTGAGGTTTGCAGTCAGCTGCCGTATCCTGA...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR TCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSCSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFSHAQQ*TRSVQH
Trigger: ATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCT...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQGKQSF*VTSCQE
Trigger: TTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCC...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSGKQSF*VTSCQE
Trigger: TTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCC...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCCAGAAGCACCAAGGCGGTTCATTTCCCTCTGCAATCCGGTAGCCCTTGTCTAACGTACACAAACACCTaGGGACTGAGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRSTKAVHFPLQSGSPCLTYTNT*GLRNPR
Trigger: TCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGT...TAGACAAGGGCTACCGGATTGCAGAGGGAAATGAACCGCCTTGGTGCTTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGTCCGAGCCAGGATTATaGCCCAGGTCACCCAAACGC +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWSEPGL*PRSPKR
Trigger: GCGTTTGGGTGACCTGGGTCATAATCCTGGCTCGGA...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR TCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTCCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAA +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSPCWRL*PMSTDQ
Trigger: TTGATCAGTAGACATGGGTCAGAGGCGCCAACACGG...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCAAATCAGCAGGCAACTaGGTAGACTCAGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSKSAGN*VDSVTP
Trigger: GGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTT...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCCACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATTGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAGTCCCACTTTATTACTaGCACTACACTGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQVPLYY*HYTVQA
Trigger: GGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAAGCTCCAACAGAGGGTaGTGGGGCTCAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRSSNRG*WGSARS
Trigger: GCTCCTGGCTGAGCCCCAGCACCCTCTGTTGGAGCT...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTCCAGCTCATGCCAGGTaGACCCACCTAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVPAHAR*THLAGL
Trigger: GAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGG...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTACCTTGTCCAGCTCATaGCAGGTGCACCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: KERPPKLLPRVALGGGGVTLSSS*QVHPPS
Trigger: GCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGT...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTATTCCGGGATGGGTCCTaGGGCCACATCCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLFRDGS*GHILSP
Trigger: TGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAA...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGACACCTCCTTCCGGGATaGGTCCTGGGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRHLLPG*VLGPHP
Trigger: AGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTG...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCATGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTCCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIRAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLASSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATTCCGCAACCCGTTTCTaGCCGGCTCCTTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANSATRF*PAPFGH
Trigger: GTGTCCAAAAGGAGCCGGCCAGAAACGGGTTGCGGA...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTCAGCTCTGGACCCTCTaGGTAAGACTAACACCCCCT +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSQLWTL*VRLTPP
Trigger: AGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTG...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTGTTGAACGGCAGCTCTaGACCCTCTGGGTAAGACTA +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVVERQL*TLWVRL
Trigger: TAGTCTTACCCAGAGGGTCCAGAGCTGCCGTTCAAC...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCTAGTGCTGGGGCGATaGATGGGAAATGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLLVLGR*MGNAYW
Trigger: CCAATAAGCATTTCCCATCCATCGCCCCAGCACTAG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTTGGATTTGCAGCTGTTaGCAAGGAGAAAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLAWICSC*QGEREQ
Trigger: CTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCA...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGTTCCTGCACGCAAGGTaGAAGTCTCTGGATTTGCAG +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLFLHAR*KSLDLQ
Trigger: CTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAA...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAATCACACCTACTCTGTaGGGTCTGAGTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILITPTL*GLSHLF
Trigger: GAAGAGGTGACTCAGACCCCACAGAGTAGGTGTGAT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAGGAAACTTCCTGCCTTaGGTCCTTCATGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPGNFLP*VLHVPL
Trigger: GAGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCC...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTGGAAACTTCCTGCCTTaGGTCCTTCATGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVGNFLP*VLHVPL
Trigger: GAGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCC...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAATGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKCSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSRQPRS*SATAAN
Trigger: GTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSARQPRS*SATAAN
Trigger: GTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCT...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPGKQSF*VTSCQE
Trigger: TTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCC...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGCAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLAQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGACGTACACAAACACCTaGGGACTGAGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQTYTNT*GLRNPR
Trigger: TCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCACGTACACAAACACCTaGGGACTGAGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLITYTNT*GLRNPR
Trigger: TCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGT...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAAACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 4 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQTAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATCCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAA +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANPCWRL*PMSTDQ
Trigger: TTGATCAGTAGACATGGGTCAGAGGCGCCAACACGG...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSIVIGS*PNGGQE
Trigger: TTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTAT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPIVIGS*PNGGQE
Trigger: TTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTAT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTAAAAGAGGTGATGGATaGTACAGAGCCAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLAKRGDG*YRAKLS
Trigger: CGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCTTCAGCTGGCAAGTTaGGCTTTCTGTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFLQLAS*AFCHGQ
Trigger: CTGACCATGACAGAAAGCTCAACTTGCCAGCTGAAG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATGCTTATTGGCCAGGCTaGCCAGAAGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHAYWPG*PEAPTE
Trigger: CTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGC...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGGCAGAGGGCTGCCCTaGTCTGTGTGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPGRGLP*SVCTFS
Trigger: TGAAAATGTACACACAGATCAGGGCAGCCCTCTGCC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGACACTAGGGCAGGGGTaGTCATCGTTTGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLATLGQG*SSFAKK
Trigger: CTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGT...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGATGTTGCTACCAGGATTaGGCTCCCTCAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGCCYQD*APSGLP
Trigger: TGGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS-3UTR TCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCGGCCTTGGTGACACCTaGAGAGTTCTCTCGCACTTC +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSGLGDT*RVLSHF
Trigger: GAAGTGCGAGAGAACTCTTCAGGTGTCACCAAGGCC...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674335.1
CDS-3UTR GCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTGATACGGCAGCTGACTaGAAACCTCAGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSDTAAD*KPQHLL
Trigger: AAGGAGGTGCTGAGGTTTGCAGTCAGCTGCCGTATC...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR GCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCACCAAGGCGGTTCATTTCCCTCTGCAATCCGGTAGCCCTTGTCTACAGCTAAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: STKAVHFPLQSGSPCLQLRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...TAGCTGTAGACAAGGGCTACCGGATTGCAGAGGGAAATGAACCGCCTTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAAAATCAGCAGGCAACTaGGTAGACTCAGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPKSAGN*VDSVTP
Trigger: GGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTT...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAACACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQLFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAATGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGTCCAAGGCAGGAAGTTaGAATGTAGGAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQSKAGS*NVGVVP
Trigger: TGGGACTACTCCTACATTGCAACTTCCTGCCTTGGA...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATAAGACTAACACCCCCTaGGCAGGCTGGAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNKTNTP*AGWRSR
Trigger: GCGACTTCTCCAGCCTGCGCAGGGGGTGTTAGTCTT...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGAAGCCCAGTACTTCCATaGCGCAGCCTGCCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGSPVLP*RSLPLL
Trigger: TAGCAAGGGCAGGCTGCGGCATGGAAGTACTGGGCT...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTTTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAATTACTCCCAAGAGTTaGACTCGGTGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPITPKS*TRWRRS
Trigger: ACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAAT...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGTCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMSARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLAAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCGGAAGTCTCTGGATTTaGAGCTGTTGGCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSGSLWI*SCWQGE
Trigger: TTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCC...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGACCCCAACACTTCCTaGACGCAAGGTGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANDPNTS*TQGGSL
Trigger: GAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTC...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGAACCTTGTCCAGCTCATaGCAGGTGCACCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGTLSSS*QVHPPS
Trigger: GCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGT...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCAAACAGGAAACTTCCTaGCTTGGGTCCTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSKQETS*LGSFMS
Trigger: GGACATGAAGGACCCAAGGCAGGAAGTTTCCTGTTT...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCACCTCCTTCCGGGATaGGTCCTGGGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNHLLPG*VLGPHP
Trigger: AGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTG...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACCACCTCCTTCCGGGATaGGTCCTGGGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYHLLPG*VLGPHP
Trigger: AGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTG...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCACCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LYYCHYTVQAYTILCGLLPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...TAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTCCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAAGTGAGCTGGAAACCAGTACATAATAGGAGTGGAGGAGCCCAAAAACCTGGTAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: QVSWKPVHNRSGGAQKPGSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...ACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGCTCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVDLLSW*GVLCKR
Trigger: CCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTC...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANLPTCP*RVQVMS
Trigger: GGACATGACCTGGACTCTCCAGGGACAGGTTGGAAG...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATCTGGCCGGCTCCTTTTaGACACAGTCCCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNLAGSF*TQSLLG
Trigger: ACCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAG...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTGAGCCAAAGGCCTCGTaGGGGCTGCCTTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIEPKAS*GLPSVS
Trigger: GCTGACAGAAGGCAGCCCCCACGAGGCCTTTGGCTC...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCCCTATCTGAGAATCTaGGACATCCTGTTGAACGGC +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFPYLRI*DILLNG
Trigger: GCCGTTCAACAGGATGTCCCAGATTCTCAGATAGGG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAGTCTGGCTCAAGGAATaGGCAAAAGTAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPVWLKE*AKVAQQ
Trigger: CTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGAC...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCAGCCAAACTCTCGTCTaGCTCAAGGAATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLISQTLV*LKEWAK
Trigger: TTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCT...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTGCTGGGGCGATGGATaGGAAATGCTTATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPCWGDG*EMLIGQ
Trigger: CTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCA...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTTGCTGGGGCGATGGATaGGAAATGCTTATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPCWGDG*EMLIGQ
Trigger: CTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCA...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCTAGTGCTGGGGCGATaGATGGGAAATGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFLVLGR*MGNAYW
Trigger: CCAATAAGCATTTCCCATCCATCGCCCCAGCACTAG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCTAGTGCTGGGGCGATaGATGGGAAATGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPLVLGR*MGNAYW
Trigger: CCAATAAGCATTTCCCATCCATCGCCCCAGCACTAG...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGGCCAAGAAGGGCACTTaGTGTCTTGGCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWAKKGT*CLGRRQ
Trigger: CTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGC...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTTTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSFLPTN*RDTRAG
Trigger: CCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGTTTCTGCCAACTAACTaGAGGGACACTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLAFLPTN*RDTRAG
Trigger: CCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLQGGSL*ICSCWQ
Trigger: TTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAATCACACCTACTCTGTaGGGTCTGAGTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPITPTL*GLSHLF
Trigger: GAAGAGGTGACTCAGACCCCACAGAGTAGGTGTGAT...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGGAAACTTCCTGCCTTaGGTCCTTCATGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAGNFLP*VLHVPL
Trigger: GAGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 72 bp GGCCAGGAAGCAGGGCAGATACCATTTCATTCCACCTaGGACTTACGTACAATTTACCAATTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GQEAGQIPFHST*DLRTIYQFLPP
Trigger: CGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGGTATCTGCCCTGCTTCCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPCSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: KERPPKLLPRVALGGGGVRQPRS*SATAAN
Trigger: GTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCT...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTAGACATTGGCAGGGCTaGGACAGAAAAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KERPPKLLPRVALGGGGVRHWQG*DRKAEL
Trigger: CAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCT...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAGKQSF*VTSCQE
Trigger: TTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAGGAATGGGGCGGGCTaGGCCTGGCAGACAGAATTG +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKRNGAG*AWQTEL
Trigger: CAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAAAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAACGTACACAAACACCTaGGGACTGAGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQTYTNT*GLRNPR
Trigger: TCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGT...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPNLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLANLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILLECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLLECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTATGTTGCTACCAGGATTaGGCTCCCTCAGGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLCCYQD*APSGLD
Trigger: ATCTAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674273.1
CDS-3UTR TCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAATTCACCACCACCCCCTaGAGAATATCATCATTTCCC +
Preference number: 4 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQFTTTP*RISSFP
Trigger: GGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAA...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCACTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAAAAAGAGGTGATGGATaGTACAGAGCCAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILKRGDG*YRAKLS
Trigger: CGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGCTTCAGCTGGCAAGTTaGGCTTTCTGTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEELQLAS*AFCHGQ
Trigger: CTGACCATGACAGAAAGCTCAACTTGCCAGCTGAAG...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCTTCAGCTGGCAAGTTaGGCTTTCTGTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPLQLAS*AFCHGQ
Trigger: CTGACCATGACAGAAAGCTCAACTTGCCAGCTGAAG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTCTTCAGCTGGCAAGTTaGGCTTTCTGTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSALQLAS*AFCHGQ
Trigger: CTGACCATGACAGAAAGCTCAACTTGCCAGCTGAAG...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAGGCAGAGGGCTGCCCTaGTCTGTGTGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLGRGLP*SVCTFS
Trigger: TGAAAATGTACACACAGATCAGGGCAGCCCTCTGCC...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATACACTAGGGCAGGGGTaGTCATCGTTTGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHTLGQG*SSFAKK
Trigger: CTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGT...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCAGGAATAATCAGTCCTaGTTATCCCCCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIRNNQS*LSPKRR
Trigger: CCTCCTTTTGGGGGATAATCAGGACTGATTATTCCT...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATAGGAATAATCAGTCCTaGTTATCCCCCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDRNNQS*LSPKRR
Trigger: CCTCCTTTTGGGGGATAATCAGGACTGATTATTCCT...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGGTCTCAGAAGGAAATaGCTTTTCTCTGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFGLRRK*LFSETV
Trigger: TACAGTTTCAGAGAAAAGTCATTTCCTTCTGAGACC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAAATCAGCAGGCAACTaGGTAGACTCAGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPKSAGN*VDSVTP
Trigger: GGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTACCCAGGTCATGAAGTaGAACTGCAGCCAACATGAA +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVTQVMK*NCSQHE
Trigger: TTCATGTTGGCTGCAGTTGCACTTCATGACCTGGGT...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAGGCTGTCATGTTTTCTaGTTCTTAAACCTCACGGTA +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQGCHVF*FLNLTV
Trigger: TACCGTGAGGTTTAAGAAGCAGAAAACATGACAGCC...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTGTCCCACTTTATTACTaGCACTACACTGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPVPLYY*HYTVQA
Trigger: GGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATAACAGGCACCTTATCTaGCAGATGTTACTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDNRHLI*QMLLLS
Trigger: GGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTT...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGAACAGGCACCTTATCTaGCAGATGTTACTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQNRHLI*QMLLLS
Trigger: GGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTGGGGTGATCATCGTTTaGCAAGAAGGGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVGVIIV*QEGHLV
Trigger: CACCAAGTGCCCTTCTTGGCAAACGATGATCACCCC...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCGGGGTGATCATCGTTTaGCAAGAAGGGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSGVIIV*QEGHLV
Trigger: CACCAAGTGCCCTTCTTGGCAAACGATGATCACCCC...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTGGAAGTCTCTGGATTTaGAGCTGTTGGCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVGSLWI*SCWQGE
Trigger: TTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCC...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCAACCTTGTCCAGCTCATaGCAGGTGCACCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPTLSSS*QVHPPS
Trigger: GCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGT...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTGTGGTTTCAGTTATCTaGCCTCCAAACGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSVVSVI*PPNEAR
Trigger: CCTGGCTTCGTTTGGAGGGCAGATAACTGAAACCAC...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS-3UTR GCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTATAGTGAGCGGAGGCTaGTGTCTCAGAGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVIVSGG*CLRVSA
Trigger: AGCACTGACTCTGAGACAGCAGCCTCCGCTCACTAT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674335.1
CDS-3UTR CCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAAAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTATGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGAAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNDLLSW*GVLCKR
Trigger: CCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTC...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAACTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKLPTCP*RVQVMS
Trigger: GGACATGACCTGGACTCTCCAGGGACAGGTTGGAAG...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLILLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGGACACAGTCCCTTCTaGGTACTAATCATCCACGCT +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAGHSPF*VLIIHA
Trigger: AGCGTGGATGATTAGTACCCAGAAGGGACTGTGTCC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGAGCCAAAGGCCTCGTaGGGGCTGCCTTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAEPKAS*GLPSVS
Trigger: GCTGACAGAAGGCAGCCCCCACGAGGCCTTTGGCTC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTCTCCCAAGTCACATaGCTGGTAAATGGGGTTTTA +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILLSQVT*LVNGVL
Trigger: TAAAACCCCATTTACCAGCCATGTGACTTGGGAGAG...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTGTCTGGCTCAAGGAATaGGCAAAAGTAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPVWLKE*AKVAQQ
Trigger: CTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGAC...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCAGCCAAACTCTCGTCTaGCTCAAGGAATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFSQTLV*LKEWAK
Trigger: TTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCT...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGGAGCTTCCCTTCAGCTaGCAAGTTGAGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEELPFS*QVELSV
Trigger: GACAGAAAGCTCAACTTGCCAGCTGAAGGGAAGCTC...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGAGCTTCCCTTCAGCTaGCAAGTTGAGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPELPFS*QVELSV
Trigger: GACAGAAAGCTCAACTTGCCAGCTGAAGGGAAGCTC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCTGGATTTGCAGCTGTTaGCAAGGAGAAAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFWICSC*QGEREQ
Trigger: CTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCA...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTCCTGCACGCAAGGTaGAAGTCTCTGGATTTGCAG +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEFLHAR*KSLDLQ
Trigger: CTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAA...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATGTGCACCCACCTAGCTaGGCTCCTGTTACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHVHPPS*APVTRF
Trigger: AAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCAC...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAGTGCACCCACCTAGCTaGGCTCCTGTTACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLVHPPS*APVTRF
Trigger: AAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCAC...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATGGAAACTTCCTGCCTTaGGTCCTTCATGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHGNFLP*VLHVPL
Trigger: GAGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCC...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GCTGGAAACCAGTACATAATAGGAGTGGAGGAGCCCAAAAACCTGGTGAGAACCAATACTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGNQYIIGVEEPKNLVRTNTSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGTATT...GGTTCTCACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
3UTR CAA 72 bp CAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTaGCAGCTGTTGGCAAGGAGAAAGGGAACAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QHFLHARWKSLD*QLLARRKGTVS
Trigger: AGAAACTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTCAGGATACGGCAGCTaGCTGCAAACCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPSGYGS*LQTSAP
Trigger: AGGTGCTGAGGTTTGCAGTCAGCTGCCGTATCCTGA...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKCSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACTGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYCSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQSHAQQ*TRSVQH
Trigger: ATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCT...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQEQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILEQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLEQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNRQPRS*SATAAN
Trigger: GTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCT...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: ARSERKPCPAHARCTHLANWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGACAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTACGTACACAAACACCTaGGGACTGAGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSTYTNT*GLRNPR
Trigger: TCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLNLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSNLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTGAGGAATCCAAGATCGGGCTTCTCTAGGGTCTTATTGTTCTTGCTCCTTTGCAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: LRNPRSGFSRVLLFLLLCSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...GCAAAGGAGCAAGAACAATAAGACCCTAGAGAAGCCCGATCTTGGATTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ACCAGTATAGCCACTGGTGCAGCCAGTAGAAAATTGGGCACCTGCTTGAGCTCACTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TSIATGAASRKLGTCLSSLECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGCACCAGTGGCTATACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACTGTTGCTACCAGGATTaGGCTCCCTCAGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYCCYQD*APSGLQ
Trigger: CTGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374145.6
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTCACCACCACCCCCTaGAGAATATCATCATTTCCC +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPFTTTP*RISSFP
Trigger: GGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAA...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAA +
Preference number: 4 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPPCWRL*PMSTDQ
Trigger: TTGATCAGTAGACATGGGTCAGAGGCGCCAACACGG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGAATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGIVIGS*PNGGQE
Trigger: TTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTAT...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCAAAAGAGGTGATGGATaGTACAGAGCCAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFKRGDG*YRAKLS
Trigger: CGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTT...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTTGTTGCTACCAGGATTaGGCTCCCTCAGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVCCYQD*APSGLS
Trigger: TGAGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674222.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTCCCTCAGGCCTCTCTaGCACTTGACCATGCTTGCA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPSLRPL*HLTMLA
Trigger: TGCAAGCATGGTCAAGTGGCAGAGAGGCCTGAGGGA...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000078527.9
CDS-3UTR GCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGGTCATGAAGTGCAACTaGAGCCAACATGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQVMKCN*SQHEEQ
Trigger: TTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGAC...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTACCCAGGTCATGAAGTaGAACTGCAGCCAACATGAA +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSTQVMK*NCSQHE
Trigger: TTCATGTTGGCTGCAGTTGCACTTCATGACCTGGGT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCGACTGGTGGGGACAGTaGAAAACCAGACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPDWWGQ*KTRQPR
Trigger: CCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTC...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQRPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTC +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRRPLSS*PMALNV
Trigger: GACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCG...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTACACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCTGGAAACCAGTACATAATAGGAGTGGAGGAGCCCAAAAACCTGGTGAGAACCACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: SWKPVHNRSGGAQKPGENHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...GTTCTCACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSALFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSLFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLAGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACTGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCATGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACTGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTATTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTATTACTCCCAAGAGTTaGACTCGGTGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVITPKS*TRWRRS
Trigger: ACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAAT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCTCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QFTNSCRRVGASDPCLLISARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGTCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: AETGPQHFLHARWKSLDLSARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTAAAGGGAACAGTTTCTaGCAACTAACTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVKGNSF*QLTGGT
Trigger: TGTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTT...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGGAAGTCTCTGGATTTaGAGCTGTTGGCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAGSLWI*SCWQGE
Trigger: TTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAGAGCGAAGAACCCAGTaGTCCTACCTCGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLERRTQ*SYLGNK
Trigger: TTTATTGCCGAGGTAGGAGCACTGGGTTCTTCGCTC...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACTTCCGGGATGGGTCCTaGGGCCACATCCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNFRDGS*GHILSP
Trigger: TGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAA...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACTTCCGGGATGGGTCCTaGGGCCACATCCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYFRDGS*GHILSP
Trigger: TGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAA...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCACCTCCTTCCGGGATaGGTCCTGGGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQHLLPG*VLGPHP
Trigger: AGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCCAAAGGCTCAGGAATaGGGCGGGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQPKAQE*GGLSLA
Trigger: TGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSRAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPLPTCP*RVQVMS
Trigger: GGACATGACCTGGACTCTCCAGGGACAGGTTGGAAG...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTGGACACAGTCCCTTCTaGGTACTAATCATCCACGCT +
Preference number: 4 (lower is better)
Translates to: KERPPKLLPRVALGGGGVGHSPF*VLIIHA
Trigger: AGCGTGGATGATTAGTACCCAGAAGGGACTGTGTCC...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAACTGGCCGGCTCCTTTTaGACACAGTCCCTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKLAGSF*TQSLLG
Trigger: ACCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAG...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGACCCCCTGCGCAGGCTaGAGAAGTCGCTCTGACCCA +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRTPCAG*RSRSDP
Trigger: TGGGTCAGAGCGACTTCTCCAGCCTGCGCAGGGGGT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGCCCTATCTGAGAATCTaGGACATCCTGTTGAACGGC +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWPYLRI*DILLNG
Trigger: GCCGTTCAACAGGATGTCCCAGATTCTCAGATAGGG...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATGTCTGGCTCAAGGAATaGGCAAAAGTAGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHVWLKE*AKVAQQ
Trigger: CTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGAC...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTAGCCAAACTCTCGTCTaGCTCAAGGAATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPSQTLV*LKEWAK
Trigger: TTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCT...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCGAGCTTCCCTTCAGCTaGCAAGTTGAGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSELPFS*QVELSV
Trigger: GACAGAAAGCTCAACTTGCCAGCTGAAGGGAAGCTC...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGGGCACTTGGTGTCTTaGCAGAAGGCAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAGHLVS*QKAEGC
Trigger: GCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGCCAAGAAGGGCACTTaGTGTCTTGGCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVAKKGT*CLGRRQ
Trigger: CTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGC...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGAGTGCACCCACCTAGCTaGGCTCCTGTTACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGVHPPS*APVTRF
Trigger: AAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCAC...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATGTGCACCCACCTAGCTaGGCTCCTGTTACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNVHPPS*APVTRF
Trigger: AAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCAC...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 72 bp AATCCAAGATCGGGCTTCTCTAGGGTCTTATTGTTCTaGCTCCTTTGCAGCCCAAGTGTAAGGCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: NPRSGFSRVLLF*LLCSPSVRQSQ
Trigger: TTGGCTCTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAAGCCCGATCTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATGTTGCTACCAGGATTaGGCTCCCTCAGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKCCYQD*APSGLS
Trigger: AGAGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACA...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000078527.9
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPSHAQQ*TRSVQH
Trigger: ATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGCTGCCCCATGGCACTaGATGTCAGGAGGGCAAACA +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTAAPWH*MSGGQT
Trigger: TGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAAAAAGCCTTGGCATTaGGAATGCATGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAKKPWH*ECMRKP
Trigger: TGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTT...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAAAAAGCCTTGGCATTaGGAATGCATGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPKKPWH*ECMRKP
Trigger: TGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATACGTACACAAACACCTaGGGACTGAGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHTYTNT*GLRNPR
Trigger: TCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGT...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGAAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTCTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSALECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSALCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLALCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVTAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTCTGACCCATGTCTACTaGTCAAGTAAGCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVLTHVY*SSKQAS
Trigger: AGATGCCTGCTTACTTGATCAGTAGACATGGGTCAG...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTCTCAGCAGGGGCCAGTaGTCTTACTACCATTATAGT +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVLSRGQ*SYYHYS
Trigger: ACTATAATGGTAGTAAGATCACTGGCCCCTGCTGAG...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGCTCAGCAGGGGCCAGTaGTCTTACTACCATTATAGT +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWLSRGQ*SYYHYS
Trigger: ACTATAATGGTAGTAAGATCACTGGCCCCTGCTGAG...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAATTACCCATCTGTTTTaGAGAGTTTCTGCTTACTGG +
Preference number: 4 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILITHLF*RVSAYW
Trigger: CCAGTAAGCAGAAACTCTTCAAAACAGATGGGTAAT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACGCTTATTGGCCAGGCTaGCCAGAAGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYAYWPG*PEAPTE
Trigger: CTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGC...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGCTTATTGGCCAGGCTaGCCAGAAGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKAYWPG*PEAPTE
Trigger: CTCTGTTGGAGCTTCTGGTCAGCCTGGCCAATAAGC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCGGCAGAGGGCTGCCCTaGTCTGTGTGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPGRGLP*SVCTFS
Trigger: TGAAAATGTACACACAGATCAGGGCAGCCCTCTGCC...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTTCGGCAATAAAGAGCTaGAACAGGACCCCAACACTT +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVSAIKS*NRTPTL
Trigger: AAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGA...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAGGAATAATCAGTCCTaGTTATCCCCCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPRNNQS*LSPKRR
Trigger: CCTCCTTTTGGGGGATAATCAGGACTGATTATTCCT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCGGTCTCAGAAGGAAATaGCTTTTCTCTGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSGLRRK*LFSETV
Trigger: TACAGTTTCAGAGAAAAGTCATTTCCTTCTGAGACC...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCACCCAGGTCATGAAGTaGAACTGCAGCCAACATGAA +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSTQVMK*NCSQHE
Trigger: TTCATGTTGGCTGCAGTTGCACTTCATGACCTGGGT...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGACTGGTGGGGACAGTaGAAAACCAGACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKDWWGQ*KTRQPR
Trigger: CCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACGACTGGTGGGGACAGTaGAAAACCAGACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNDWWGQ*KTRQPR
Trigger: CCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTC...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVLFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTGAGGAATCCAAGATCGGGCTTCTCTAGGGTCTTATTGTTCTTGCTCCTTTGCGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: LRNPRSGFSRVLLFLLLCEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...GCAAAGGAGCAAGAACAATAAGACCCTAGAGAAGCCCGATCTTGGATTCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATTGGTGGGGAGTCCTCTaGAAGAGGCTTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYWWGVL*KRLPRH
Trigger: GTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCA...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGGGAAGTCTCTGGATTTaGAGCTGTTGGCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWGSLWI*SCWQGE
Trigger: TTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCC...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGACCCCAACACTTCCTaGACGCAAGGTGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKDPNTS*TQGGSL
Trigger: GAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACGACCCCAACACTTCCTaGACGCAAGGTGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNDPNTS*TQGGSL
Trigger: GAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTC...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAAGAGCGAAGAACCCAGTaGTCCTACCTCGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKERRTQ*SYLGNK
Trigger: TTTATTGCCGAGGTAGGAGCACTGGGTTCTTCGCTC...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAACCTTGTCCAGCTCATaGCAGGTGCACCCACCTAGC +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTTLSSS*QVHPPS
Trigger: GCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGT...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAAACAGGAAACTTCCTaGCTTGGGTCCTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLKQETS*LGSFMS
Trigger: GGACATGAAGGACCCAAGGCAGGAAGTTTCCTGTTT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTTGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEISSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYDLLSW*GVLCKR
Trigger: CCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTC...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNDLLSW*GVLCKR
Trigger: CCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTC...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ACCAGTATAGCCACTGGTGCAGCCAGTAGAAAATTGGGCACCTGCTTGAGCTCAAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: TSIATGAASRKLGTCLSSNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGCACCAGTGGCTATACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYLPTCP*RVQVMS
Trigger: GGACATGACCTGGACTCTCCAGGGACAGGTTGGAAG...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTCTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACATCCGCAACCCGTTTCTaGCCGGCTCCTTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTSATRF*PAPFGH
Trigger: GTGTCCAAAAGGAGCCGGCCAGAAACGGGTTGCGGA...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATTCCGCAACCCGTTTCTaGCCGGCTCCTTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYSATRF*PAPFGH
Trigger: GTGTCCAAAAGGAGCCGGCCAGAAACGGGTTGCGGA...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAAGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATGAGCTTCCCTTCAGCTaGCAAGTTGAGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNELPFS*QVELSV
Trigger: GACAGAAAGCTCAACTTGCCAGCTGAAGGGAAGCTC...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGGGCACTTGGTGTCTTaGCAGAAGGCAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRGHLVS*QKAEGC
Trigger: GCAGCCCTCTGCCTTCTGCCAAGACACCAAGTGCCC...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGCCAAGAAGGGCACTTaGTGTCTTGGCAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSAKKGT*CLGRRQ
Trigger: CTGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTCAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVQGGSL*ICSCWQ
Trigger: TTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTG...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAGGAAACTTCCTGCCTTaGGTCCTTCATGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGGNFLP*VLHVPL
Trigger: GAGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCC...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACATCAGGATACGGCAGCTaGCTGCAAACCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTSGYGS*LQTSAP
Trigger: AGGTGCTGAGGTTTGCAGTCAGCTGCCGTATCCTGA...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGTGTTCAGCATCCCAGTaGGACAGGCCGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQCSASQ*DRPPRR
Trigger: TCTTCTGGGCGGCCTGTCTCACTGGGATGCTGAACA...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLSHAQQ*TRSVQH
Trigger: ATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHSHAQQ*TRSVQH
Trigger: ATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCT...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKRQPRS*SATAAN
Trigger: GTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYRQPRS*SATAAN
Trigger: GTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAAGACATTGGCAGGGCTaGGACAGAAAAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSRHWQG*DRKAEL
Trigger: CAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRGKQSF*VTSCQE
Trigger: TTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCC...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVGKQSF*VTSCQE
Trigger: TTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCC...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATAAAAAGCCTTGGCATTaGGAATGCATGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANKKPWH*ECMRKP
Trigger: TGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTT...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ACCAGTATAGCCACTGGTGCAGCCAGTAGAAAATTGGGCACCTGCTTGAGCTCAAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TSIATGAASRKLGTCLSSNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGCACCAGTGGCTATACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAACAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCAAACACCTGAGGACTaGGGAATCCAAGATCGGGCT +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNQTPED*GIQDRA
Trigger: AGCCCGATCTTGGATTCCTCAGTCCTCAGGTGTTTG...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTACACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAGCCCAAAAACCTGGTaGGAACCTCCAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKSPKTW*EPPNSS
Trigger: GCTGCTGTTTGGAGGTTCTCACCAGGTTTTTGGGCT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431541.6
CDS-3UTR TCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGGCATTTAGACTGGGGTaGTTCTGTTGTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWAFRLG*FCCLRQ
Trigger: CTGCCTTAAACAACAGAATCACCCCAGTCTAAATGC...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCGCATTTAGACTGGGGTaGTTCTGTTGTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSAFRLG*FCCLRQ
Trigger: CTGCCTTAAACAACAGAATCACCCCAGTCTAAATGC...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 4 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLATAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATCCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAA +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYPCWRL*PMSTDQ
Trigger: TTGATCAGTAGACATGGGTCAGAGGCGCCAACACGG...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACCGTGTTGGCGCCTCTaGCCCATGTCTACTGATCAA +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTPCWRL*PMSTDQ
Trigger: TTGATCAGTAGACATGGGTCAGAGGCGCCAACACGG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTAATAGTGATAGGCTCATaGCCAAACGGGGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LYYCHYTVQAYTILCGLLIVIGS*PNGGQE
Trigger: TTCCTGGCCCCCGTTTGGTCATGAGCCTATCACTAT...TAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGCAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACACACTAGGGCAGGGGTaGTCATCGTTTGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYTLGQG*SSFAKK
Trigger: CTTCTTGGCAAACGATGATCACCCCTGCCCTAGTGT...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTGGTCTCAGAAGGAAATaGCTTTTCTCTGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPGLRRK*LFSETV
Trigger: TACAGTTTCAGAGAAAAGTCATTTCCTTCTGAGACC...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCCAGTTTCAAATCCCTTaGGCCTGCACATATTACATT +
Preference number: 4 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFQFQIP*ACTYYI
Trigger: AATGTAATATGTGCAGGCTCAAGGGATTTGAAACTG...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGATACGGCAGCTGACTaGAAACCTCAGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKDTAAD*KPQHLL
Trigger: AAGGAGGTGCTGAGGTTTGCAGTCAGCTGCCGTATC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCAAATCAGCAGGCAACTaGGTAGACTCAGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPKSAGN*VDSVTP
Trigger: GGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAAAATCAGCAGGCAACTaGGTAGACTCAGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRKSAGN*VDSVTP
Trigger: GGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTT...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGTCATGAAGTGCAACTaGAGCCAACATGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAVMKCN*SQHEEQ
Trigger: TTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGAC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGTCATGAAGTGCAACTaGAGCCAACATGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPVMKCN*SQHEEQ
Trigger: TTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGAC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGACTGGTGGGGACAGTaGAAAACCAGACAACCCAGG +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTDWWGQ*KTRQPR
Trigger: CCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTCGGTTCATTTCCCTCTaGAATCCGGTAGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIRFISL*NPVALV
Trigger: GACAAGGGCTACCGGATTGCAGAGGGAAATGAACCG...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAAGTCCCACTTTATTACTaGCACTACACTGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKVPLYY*HYTVQA
Trigger: GGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTAACAGGCACCTTATCTaGCAGATGTTACTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVNRHLI*QMLLLS
Trigger: GGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCAGAAGGCAGAGGGCTaGCCTGATCTGTGTGTACAT +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNQKAEG*PDLCVH
Trigger: ATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTG...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTAGGGGTGATCATCGTTTaGCAAGAAGGGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LYYCHYTVQAYTILCGLLGVIIV*QEGHLV
Trigger: CACCAAGTGCCCTTCTTGGCAAACGATGATCACCCC...TAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTAAAGGGAACAGTTTCTaGCAACTAACTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: KERPPKLLPRVALGGGGVKGNSF*QLTGGT
Trigger: TGTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTT...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCATGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAAGCAGCACTGCAGCGTaGACCACGTACACAAACACC +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTSSTAA*TTYTNT
Trigger: GGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCT...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTDLLSW*GVLCKR
Trigger: CCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTATTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCGGCATCACAAAGTGCTaGGATTACAGTGTGAAACGT +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSGITKC*DYSVKR
Trigger: ACGTTTCACACTGTAATCCCAGCACTTTGTGATGCC...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTCTCTCCCAAGTCACATaGCTGGTAAATGGGGTTTTA +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVLSQVT*LVNGVL
Trigger: TAAAACCCCATTTACCAGCCATGTGACTTGGGAGAG...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGAGCTTCCCTTCAGCTaGCAAGTTGAGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVELPFS*QVELSV
Trigger: GACAGAAAGCTCAACTTGCCAGCTGAAGGGAAGCTC...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTTTCCTGCACGCAAGGTaGAAGTCTCTGGATTTGCAG +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVFLHAR*KSLDLQ
Trigger: CTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAA...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCAATCACACCTACTCTGTaGGGTCTGAGTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPITPTL*GLSHLF
Trigger: GAAGAGGTGACTCAGACCCCACAGAGTAGGTGTGAT...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACGTGCACCCACCTAGCTaGGCTCCTGTTACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYVHPPS*APVTRF
Trigger: AAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCAC...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTTTCCAAAGCCTTATGTaGTTTCAGTTATCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSFQSLM*FQLSAL
Trigger: GAGGGCAGATAACTGAAACCACATAAGGCTTTGGAA...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455364.2
3UTR CAA 72 bp TATTACTGCCACTACACTGTTCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: YYCHYTVQAYTI*CGLLPACQLMP
Trigger: AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKGKQSF*VTSCQE
Trigger: TTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATAAAAAGCCTTGGCATTaGGAATGCATGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNKKPWH*ECMRKP
Trigger: TGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTT...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAGGCAGAGCCAAGGGTaGGTGGTCACGTATGTCCAA +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRRQSQG*VVTYVQ
Trigger: TTGGACATACGTGACCACTCACCCTTGGCTCTGCCT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKNLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATTGGGCACCTGCTTGAGCTCATAGTATTTCAAAAAGCCAACATTCCAGTAGACAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: IGHLLELIVFQKANIPVDNLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...GTCTACTGGAATGTTGGCTTTTTGAAATACTATGAGCTCAAGCAGGTGCCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAACCTGGTGAGAACCTaGACATGCATGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYNLVRT*TCMHRP
Trigger: AGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTGTTTCTTCTAATTGCTaGAAACAGGAGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVVSSNC*KQENWI
Trigger: TATCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAAC...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGCTTCAGCTGGCAAGTTaGGCTTTCTGTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGLQLAS*AFCHGQ
Trigger: CTGACCATGACAGAAAGCTCAACTTGCCAGCTGAAG...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGATCGGCAATAAAGAGCTaGAACAGGACCCCAACACTT +
Preference number: 4 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGSAIKS*NRTPTL
Trigger: AAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGA...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGGGTCTCAGAAGGAAATaGCTTTTCTCTGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEGLRRK*LFSETV
Trigger: TACAGTTTCAGAGAAAAGTCATTTCCTTCTGAGACC...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTCAGTTTCAAATCCCTTaGGCCTGCACATATTACATT +
Preference number: 4 (lower is better)
Translates to: LKFALARTRRGSLVSDTSQFQIP*ACTYYI
Trigger: AATGTAATATGTGCAGGCTCAAGGGATTTGAAACTG...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGATACGGCAGCTGACTaGAAACCTCAGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTDTAAD*KPQHLL
Trigger: AAGGAGGTGCTGAGGTTTGCAGTCAGCTGCCGTATC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAAAATCAGCAGGCAACTaGGTAGACTCAGTAACCCCC +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSKSAGN*VDSVTP
Trigger: GGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTGTCATGAAGTGCAACTaGAGCCAACATGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVVMKCN*SQHEEQ
Trigger: TTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGAC...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGTCATGAAGTGCAACTaGAGCCAACATGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANVMKCN*SQHEEQ
Trigger: TTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGAC...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTGTCATGAAGTGCAACTaGAGCCAACATGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: KERPPKLLPRVALGGGGVVMKCN*SQHEEQ
Trigger: TTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGAC...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACCACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAAACAGCAGCAGCACTaGAGCGTGGACCACGTACAC +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQKQQQH*SVDHVH
Trigger: GTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAATTACTCCCAAGAGTTaGACTCGGTGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKITPKS*TRWRRS
Trigger: ACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAAT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTATCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLSARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACAATTTACCAATTCCTaGCGCCGTGTTGGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTQFTNS*RRVGAS
Trigger: AGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAAAAAGGGAACAGTTTCTaGCAACTAACTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKKGNSF*QLTGGT
Trigger: TGTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTT...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAGACCTTCCACGAGTTaGTCCACAAAGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQRPSTS*STKPEG
Trigger: CCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACATGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIRAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGRAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGGACCTTTTGTCCTGGTaGGGAGTCCTCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQDLLSW*GVLCKR
Trigger: CCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTC...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRLPTCP*RVQVMS
Trigger: GGACATGACCTGGACTCTCCAGGGACAGGTTGGAAG...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCC +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQLPTCP*RVQVMS
Trigger: GGACATGACCTGGACTCTCCAGGGACAGGTTGGAAG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACGGACACAGTCCCTTCTaGGTACTAATCATCCACGCT +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNGHSPF*VLIIHA
Trigger: AGCGTGGATGATTAGTACCCAGAAGGGACTGTGTCC...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374145.6
ENST00000674273.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCAGCTCTGGACCCTCTaGGTAAGACTAACACCCCCT +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQQLWTL*VRLTPP
Trigger: AGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATGGCATCACAAAGTGCTaGGATTACAGTGTGAAACGT +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNGITKC*DYSVKR
Trigger: ACGTTTCACACTGTAATCCCAGCACTTTGTGATGCC...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCACATTTCATTCCACCTTaGACTTACGTACAATTTACC +
Preference number: 4 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPHFIPP*TYVQFT
Trigger: GGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCATTTCATTCCACCTTaGACTTACGTACAATTTACC +
Preference number: 4 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPHFIPP*TYVQFT
Trigger: GGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTTGGATTTGCAGCTGTTaGCAAGGAGAAAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVWICSC*QGEREQ
Trigger: CTGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCA...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGACAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGQGGSL*ICSCWQ
Trigger: TTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTG...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTATTCCTGCACGCAAGGTaGAAGTCTCTGGATTTGCAG +
Preference number: 4 (lower is better)
Translates to: LYYCHYTVQAYTILCGLLFLHAR*KSLDLQ
Trigger: CTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAA...TAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTTTCCTGCACGCAAGGTaGAAGTCTCTGGATTTGCAG +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCFLHAR*KSLDLQ
Trigger: CTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAA...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAATCACACCTACTCTGTaGGGTCTGAGTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKITPTL*GLSHLF
Trigger: GAAGAGGTGACTCAGACCCCACAGAGTAGGTGTGAT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACATCACACCTACTCTGTaGGGTCTGAGTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNITPTL*GLSHLF
Trigger: GAAGAGGTGACTCAGACCCCACAGAGTAGGTGTGAT...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
3UTR CAA 72 bp GGCTGCCCTGATCTGTGTGTACATTTTCAGAAGCATTaGACTCTGAACCAAATTCTCTCAGCTGTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: GCPDLCVHFQKH*TLNQILSAVLV
Trigger: CACTAGGACAGCTGAGAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATGTACACACAGATCAGGGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAAGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKEQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAGACATTGGCAGGGCTaGGACAGAAAAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQRHWQG*DRKAEL
Trigger: CAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAGGGAAGGCCAAGTGTaGACACCGACAGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQREGQV*TPTETE
Trigger: CTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAACGTACACAAACACCTaGGGACTGAGGAATCCAAGA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKTYTNT*GLRNPR
Trigger: TCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATATGGATATGGAAACTaGGGCTCACTGGGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKYGYGN*GSLGSS
Trigger: ACTTGACCCCAGTGAGCCTCAGTTTCCATATCCATA...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR TCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACTATGGATATGGAAACTaGGGCTCACTGGGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYYGYGN*GSLGSS
Trigger: ACTTGACCCCAGTGAGCCTCAGTTTCCATATCCATA...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGGCAAACTCAGCTCACTaGAACCTCCGCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQANSAH*NLRLPS
Trigger: ACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGC...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTTTCACCACCACCCCCTaGAGAATATCATCATTTCCC +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCFTTTP*RISSFP
Trigger: GGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAA...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAGCATTTAGACTGGGGTaGTTCTGTTGTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGAFRLG*FCCLRQ
Trigger: CTGCCTTAAACAACAGAATCACCCCAGTCTAAATGC...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGCATTTAGACTGGGGTaGTTCTGTTGTTTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVAFRLG*FCCLRQ
Trigger: CTGCCTTAAACAACAGAATCACCCCAGTCTAAATGC...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGTTTCTTCTAATTGCTaGAAACAGGAGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: VQAYTILCGLLPACQLMPVSSNC*KQENWI
Trigger: TATCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAAC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCAAAAGAGGTGATGGATaGTACAGAGCCAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPKRGDG*YRAKLS
Trigger: CGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGGGCAGAGGGCTGCCCTaGTCTGTGTGTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQGRGLP*SVCTFS
Trigger: TGAAAATGTACACACAGATCAGGGCAGCCCTCTGCC...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCATCGGCAATAAAGAGCTaGAACAGGACCCCAACACTT +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSSAIKS*NRTPTL
Trigger: AAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGA...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTTCGGCAATAAAGAGCTaGAACAGGACCCCAACACTT +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCSAIKS*NRTPTL
Trigger: AAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGA...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAAGGAATAATCAGTCCTaGTTATCCCCCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRRNNQS*LSPKRR
Trigger: CCTCCTTTTGGGGGATAATCAGGACTGATTATTCCT...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGATACGGCAGCTGACTaGAAACCTCAGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRDTAAD*KPQHLL
Trigger: AAGGAGGTGCTGAGGTTTGCAGTCAGCTGCCGTATC...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR GCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAACCCAGGTCATGAAGTaGAACTGCAGCCAACATGAA +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSTQVMK*NCSQHE
Trigger: TTCATGTTGGCTGCAGTTGCACTTCATGACCTGGGT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYLFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYLFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEILFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCCAACATTCCAGTAGACATCCTGGATATAGCTGTATATTAGTGGAACATCCCTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SQHSSRHPGYSCILVEHPLFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...GGGATGTTCCACTAATATACAGCTATATCCAGGATGTCTACTGGAATGTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AGCCAACATTCCAGTAGACATCCTGGATATAGCTGTATATTAGTGGAACATCCCGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SQHSSRHPGYSCILVEHPGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...GGGATGTTCCACTAATATACAGCTATATCCAGGATGTCTACTGGAATGTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR GCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACGGGTCTTATTGTTCTTaGTCCTTTGCAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYGSYCS*SFAAQV
Trigger: CACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCC...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKEPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACTCCAAGGCAGGAAGTTaGAATGTAGGAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYSKAGS*NVGVVP
Trigger: TGGGACTACTCCTACATTGCAACTTCCTGCCTTGGA...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACTCCAAGGCAGGAAGTTaGAATGTAGGAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYSKAGS*NVGVVP
Trigger: TGGGACTACTCCTACATTGCAACTTCCTGCCTTGGA...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTCCAAGGCAGGAAGTTaGAATGTAGGAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEISKAGS*NVGVVP
Trigger: TGGGACTACTCCTACATTGCAACTTCCTGCCTTGGA...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGACAGTGTGAAACGTCGTaGCTGGCCTGTATTATTTTT +
Preference number: 4 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGQCETS*LACIIF
Trigger: AAAAATAATACAGGCCAGGCACGACGTTTCACACTG...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATCAGTGTGAAACGTCGTaGCTGGCCTGTATTATTTTT +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNQCETS*LACIIF
Trigger: AAAAATAATACAGGCCAGGCACGACGTTTCACACTG...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACATTCAAGCAATTCTCATaGCTCAGCCTCCCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTFKQFS*LSLPSR
Trigger: CCTACTCGGGAGGCTGAGGCATGAGAATTGCTTGAA...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCATTACTCCCAAGAGTTaGACTCGGTGGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAITPKS*TRWRRS
Trigger: ACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAAT...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCGATGGATGGGAAATaGTTATTGGCCAGGCTGACC +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRAMDGK*LLARLT
Trigger: GGTCAGCCTGGCCAATAAGCATTTCCCATCCATCGC...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCAGAAGGCAGAGGGCTaGCCTGATCTGTGTGTACAT +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQQKAEG*PDLCVH
Trigger: ATGTACACACAGATCAGGGCAGCCCTCTGCCTTCTG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGGGGTGATCATCGTTTaGCAAGAAGGGCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRGVIIV*QEGHLV
Trigger: CACCAAGTGCCCTTCTTGGCAAACGATGATCACCCC...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGGGAAGTCTCTGGATTTaGAGCTGTTGGCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGGSLWI*SCWQGE
Trigger: TTCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCC...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGAGCGAAGAACCCAGTaGTCCTACCTCGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAERRTQ*SYLGNK
Trigger: TTTATTGCCGAGGTAGGAGCACTGGGTTCTTCGCTC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGAGCGAAGAACCCAGTaGTCCTACCTCGGCAATAAA +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTERRTQ*SYLGNK
Trigger: TTTATTGCCGAGGTAGGAGCACTGGGTTCTTCGCTC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAAACAGGAAACTTCCTaGCTTGGGTCCTTCATGTCC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKKQETS*LGSFMS
Trigger: GGACATGAAGGACCCAAGGCAGGAAGTTTCCTGTTT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGTGGAGCGTACCCCAGTaGCAAAGGCAAAGAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRWSVPQ*QRQRGV
Trigger: TACTCCTCTTTGCCTTTGCCACTGGGGTACGCTCCA...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSARAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCCTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGACTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACAGCCAAACTCTCGTCTaGCTCAAGGAATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYSQTLV*LKEWAK
Trigger: TTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCT...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCCTAGTGCTGGGGCGATaGATGGGAAATGCTTATTGG +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSALVLGR*MGNAYW
Trigger: CCAATAAGCATTTCCCATCCATCGCCCCAGCACTAG...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYSHAQQ*TRSVQH
Trigger: ATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSSHAQQ*TRSVQH
Trigger: ATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAAAAAGCCTTGGCATTaGGAATGCATGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKKKPWH*ECMRKP
Trigger: TGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAGCCCAAAAACCTGGTaGGAACCTGAACATGCATGC +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQSPKTW*EPEHAC
Trigger: GCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAACTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKLECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTCTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEILECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACCACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCCTCAGCAGGGGCCAGTaGTCTTACTACCATTATAGT +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSALSRGQ*SYYHYS
Trigger: ACTATAATGGTAGTAAGATCACTGGCCCCTGCTGAG...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTCAGCAGGGGCCAGTaGTCTTACTACCATTATAGT +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTLSRGQ*SYYHYS
Trigger: ACTATAATGGTAGTAAGATCACTGGCCCCTGCTGAG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACAAAAGAGGTGATGGATaGTACAGAGCCAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYKRGDG*YRAKLS
Trigger: CGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTT...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATTCGGCAATAAAGAGCTaGAACAGGACCCCAACACTT +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYSAIKS*NRTPTL
Trigger: AAGTGTTGGGGTCCTGTTTCAGCTCTTTATTGCCGA...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTAGGAATAATCAGTCCTaGTTATCCCCCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCRNNQS*LSPKRR
Trigger: CCTCCTTTTGGGGGATAATCAGGACTGATTATTCCT...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAAGGAGAGAAGGCTTCTaGATGGTGATCTGGGATGAT +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTRREGF*MVIWDD
Trigger: ATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCT...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCGTCATGAAGTGCAACTaGAGCCAACATGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPVMKCN*SQHEEQ
Trigger: TTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGAC...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGCACGTATGTCCAAGTTaGCCAGGCAACCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRHVCPS*PGNQYS
Trigger: GCTATACTGGTTGCCTGGGCAACTTGGACATACGTG...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATTTGTTCTTGCTCCTTTaGAGCCCAAGTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYLFLLL*SPSVRQ
Trigger: CTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAA...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACATCCAAGGCAGGAAGTTaGAATGTAGGAGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTSKAGS*NVGVVP
Trigger: TGGGACTACTCCTACATTGCAACTTCCTGCCTTGGA...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCTGTCATGTTTTCTaGTTCTTAAACCTCACGGTA +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVGCHVF*FLNLTV
Trigger: TACCGTGAGGTTTAAGAAGCAGAAAACATGACAGCC...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR GCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAAACAGGCACCTTATCTaGCAGATGTTACTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSNRHLI*QMLLLS
Trigger: GGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGAAAGGGAACAGTTTCTaGCAACTAACTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGKGNSF*QLTGGT
Trigger: TGTCCCTCCAGTTAGTTGGCAGAAACTGTTCCCTTT...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQRAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAGAGCCAAGGGTGAGTaGTCACGTATGTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRRAKGE*SRMSKL
Trigger: CAACTTGGACATACGTGACCACTCACCCTTGGCTCT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEILLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACGGCATCACAAAGTGCTaGGATTACAGTGTGAAACGT +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYGITKC*DYSVKR
Trigger: ACGTTTCACACTGTAATCCCAGCACTTTGTGATGCC...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGGCATCACAAAGTGCTaGGATTACAGTGTGAAACGT +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKGITKC*DYSVKR
Trigger: ACGTTTCACACTGTAATCCCAGCACTTTGTGATGCC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGCATTTCATTCCACCTTaGACTTACGTACAATTTACC +
Preference number: 4 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWHFIPP*TYVQFT
Trigger: GGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAAGCCAAACTCTCGTCTaGCTCAAGGAATGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTSQTLV*LKEWAK
Trigger: TTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCT...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTAGAGTTTCTGCTTACTaGATGTTTTGGCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: KERPPKLLPRVALGGGGVRVSAY*MFWLKW
Trigger: CCATTTAAGCCAAAACATCCAGTAAGCAGAAACTCT...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATAGAGTTTCTGCTTACTaGATGTTTTGGCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHRVSAY*MFWLKW
Trigger: CCATTTAAGCCAAAACATCCAGTAAGCAGAAACTCT...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCCAAGGTGGAAGTCTCTaGATTTGCAGCTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAQGGSL*ICSCWQ
Trigger: TTGCCAACAGCTGCAAATCCAGAGACTTCCACCTTG...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCATCCTTCTCCGTTGGTaGATTTCTTGTTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPILLRW*ISCFSG
Trigger: TCCTGAGAAACAAGAAATCCACCAACGGAGAAGGAT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455364.2
3UTR CAA 72 bp ATTGAAAGGAAAGACCACCTAAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCT +
Preference number: 4 (lower is better)
Translates to: IERKDHLNYSQE*HSVEEEFLLIA
Trigger: AGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYEQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKEQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGEQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCAAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACACTTCTCCCATTCCTaGCCAGCTTTCAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTHFSHS*PAFKEK
Trigger: TTTCTCTTTGAAAGCTGGTCAGGAATGGGAGAAGTG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYTAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTACTGCTTTCCCTCATTaGAAGGAAAGACCACCTAAA +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCTAFPH*KERPPK
Trigger: TTTAGGTGGTCTTTCCTTTCAATGAGGGAAAGCAGT...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTATTACCCATCTGTTTTaGAGAGTTTCTGCTTACTGG +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVITHLF*RVSAYW
Trigger: CCAGTAAGCAGAAACTCTTCAAAACAGATGGGTAAT...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCATTACCCATCTGTTTTaGAGAGTTTCTGCTTACTGG +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPITHLF*RVSAYW
Trigger: CCAGTAAGCAGAAACTCTTCAAAACAGATGGGTAAT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCACAAAATTCCAATTCTTaGGGCTTTCCAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSQNSNS*GFPEAA
Trigger: AGCAGCTTCTGGAAAGCCTCAAGAATTGGAATTTTG...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCCAGTTTCAAATCCCTTaGGCCTGCACATATTACATT +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPQFQIP*ACTYYI
Trigger: AATGTAATATGTGCAGGCTCAAGGGATTTGAAACTG...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGAACCTGAACATGCATaGACAGACCTCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPREPEHA*TDLQTA
Trigger: TGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTC...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGGTCCCACTTTATTACTaGCACTACACTGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQVPLYY*HYTVQA
Trigger: GGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGAC...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTCAGTGTGAAACGTCGTaGCTGGCCTGTATTATTTTT +
Preference number: 4 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIQCETS*LACIIF
Trigger: AAAAATAATACAGGCCAGGCACGACGTTTCACACTG...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACATTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTLLSDP*VKLASN
Trigger: GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAA...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCCTCTCCCAAGTCACATaGCTGGTAAATGGGGTTTTA +
Preference number: 4 (lower is better)
Translates to: KETVNRMVKGQLLVIKSALSQVT*LVNGVL
Trigger: TAAAACCCCATTTACCAGCCATGTGACTTGGGAGAG...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAAAAAGCCTTGGCATTaGGAATGCATGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRKKPWH*ECMRKP
Trigger: TGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGCTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRLECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCTAGAATGTATCGTGTaGCTGGAGAACAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQLECIV*LENRFS
Trigger: GGAAAACCTGTTCTCCAGTCACACGATACATTCTAG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCTCTGCTATGTTGATTaGCTAGACAGATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQLCYVD*LDRSRC
Trigger: ACACCTGGATCTGTCTAGTCAATCAACATAGCAGAG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACATTACCCATCTGTTTTaGAGAGTTTCTGCTTACTGG +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYITHLF*RVSAYW
Trigger: CCAGTAAGCAGAAACTCTTCAAAACAGATGGGTAAT...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGGGTCTCAGAAGGAAATaGCTTTTCTCTGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGGLRRK*LFSETV
Trigger: TACAGTTTCAGAGAAAAGTCATTTCCTTCTGAGACC...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATCAGTGTGAAACGTCGTaGCTGGCCTGTATTATTTTT +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYQCETS*LACIIF
Trigger: AAAAATAATACAGGCCAGGCACGACGTTTCACACTG...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAACTGTTAGAACAACTTTaGACCCTCCTTAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKLLEQL*TLLKGN
Trigger: GTTTCCTTTAAGGAGGGTGCAAAGTTGTTCTAACAG...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS-3UTR CCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATAATGTATCGTGTGACTaGAGAACAGGTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYNVSCD*RTGFPV
Trigger: CACTGGAAAACCTGTTCTCCAGTCACACGATACATT...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCTATACCATCTTGTGTaGACTGTTACCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQLYHLV*TVTSLS
Trigger: TGACAGGCTGGTAACAGTCCACACAAGATGGTATAG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGACATTTCATTCCACCTTaGACTTACGTACAATTTACC +
Preference number: 4 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRHFIPP*TYVQFT
Trigger: GGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTCATTTCATTCCACCTTaGACTTACGTACAATTTACC +
Preference number: 4 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVHFIPP*TYVQFT
Trigger: GGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGAACAAGAAATTGAGTaGTGCTACCGAAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPREQEIE*CYRNQQ
Trigger: CTGCTGATTTCGGTAGCATCACTCAATTTCTTGTTC...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACGTTTCTTCTAATTGCTaGAAACAGGAGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: FITATTLFRPIPSCVDCYVSSNC*KQENWI
Trigger: TATCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAAC...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTTTCTTCTAATTGCTaGAAACAGGAGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: KWSHFITATTLFRPIPSCVSSNC*KQENWI
Trigger: TATCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAAC...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGTTTCTTCTAATTGCTaGAAACAGGAGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSVSSNC*KQENWI
Trigger: TATCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAAC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATATTACCCATCTGTTTTaGAGAGTTTCTGCTTACTGG +
Preference number: 4 (lower is better)
Translates to: KSLEPAHITFSDDSERVYITHLF*RVSAYW
Trigger: CCAGTAAGCAGAAACTCTTCAAAACAGATGGGTAAT...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACAGTTTCAAATCCCTTaGGCCTGCACATATTACATT +
Preference number: 4 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTQFQIP*ACTYYI
Trigger: AATGTAATATGTGCAGGCTCAAGGGATTTGAAACTG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGCAGTGTGAAACGTCGTaGCTGGCCTGTATTATTTTT +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRQCETS*LACIIF
Trigger: AAAAATAATACAGGCCAGGCACGACGTTTCACACTG...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR GCA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGTCTGCCAGATGTTACTaGTTTCCCTCATTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRSARCY*FPSLKG
Trigger: TCCTTTCAATGAGGGAAAGCAGTAACATCTGGCAGA...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGTGAAACGTCGTGCCTaGCCTGTATTATTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: YTILCGLLPACQLMPLMKVKRRA*PVLFLK
Trigger: TTTTAAAAATAATACAGGCCAGGCACGACGTTTCAC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR TCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAATTGGGCACCTGCTTaGGCTCATAGTATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQNWAPA*AHSISK
Trigger: TTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CCA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAGAGTTTCTGCTTACTaGATGTTTTGGCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQRVSAY*MFWLKW
Trigger: CCATTTAAGCCAAAACATCCAGTAAGCAGAAACTCT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS GCA 90 bp GCCTCCCAGAGGGGCCACGGCCCAAGGACCACTCCCGAGGGAGCCTaGAGAGCCCCACCAGGCCACAGGGCCGGAAGCAGACGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: ASQRGHGPRTTPEGA*RAPPGHRAGSRRGR
Trigger: CCGCCCTCGTCTGCTTCCGGCCCTGTGGCCTGGTGGGGCTCTGCAGGCTCCCTCGGGAGTGGTCCTTGGGCCGTGGCCCCTCTGGGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS CCA 90 bp AGCCCCACCAGGCCACAGGGCCGGAAGCAGACGAGGGCGGGAGGCTaGAAAGGAAGAGGCGGCGCCCGAGGCTGCTATGGCGGAGGGGCG +
Preference number: 5 (lower is better)
Translates to: SPTRPQGRKQTRAGG*KGRGGARGCYGGGA
Trigger: CGCCCCTCCGCCATAGCAGCCTCGGGCGCCGCCTCTTCCTTTCCAGCCTCCCGCCCTCGTCTGCTTCCGGCCCTGTGGCCTGGTGGGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS CCA 90 bp TGGAGAAGTCGCTCTGACCCAGGGTCCTCAGAGCCAAAGGCCTCGTaGGGGCTGCCTTCTGTCAGCCCAGCCGTGTCCGCAACCCGTTTC +
Preference number: 5 (lower is better)
Translates to: WRSRSDPGSSEPKAS*GLPSVSPAVSATRF
Trigger: GAAACGGGTTGCGGACACGGCTGGGCTGACAGAAGGCAGCCCCCACGAGGCCTTTGGCTCTGAGGACCCTGGGTCAGAGCGACTTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CCA 90 bp GCAGCTCTGGACCCTCTGGGTAAGACTAACACCCCCTGCGCAGGCTaGAGAAGTCGCTCTGACCCAGGGTCCTCAGAGCCAAAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: AALDPLGKTNTPCAG*RSRSDPGSSEPKAS
Trigger: CGAGGCCTTTGGCTCTGAGGACCCTGGGTCAGAGCGACTTCTCCAGCCTGCGCAGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS TCA 90 bp CGCATCCCTCGCCAAAGGGTACGCGCCCTTTCCGAGCCAGGATTATaGCCCAGGTCACCCAAACGCCTAGCCCAGTACTTCCATGCCGCA +
Preference number: 5 (lower is better)
Translates to: RIPRQRVRALSEPGL*PRSPKRLAQYFHAA
Trigger: TGCGGCATGGAAGTACTGGGCTAGGCGTTTGGGTGACCTGGGTCATAATCCTGGCTCGGAAAGGGCGCGTACCCTTTGGCGAGGGATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CCA 90 bp CGGCAGCTGACTGCAAACCTCAGCACCTCCTTCCGGGATGGGTCCTaGGGCCACATCCTTTCACCACCAGGAATTCAGGGGTGTTGCTAC +
Preference number: 5 (lower is better)
Translates to: RQLTANLSTSFRDGS*GHILSPPGIQGCCY
Trigger: GTAGCAACACCCCTGAATTCCTGGTGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTGCTGAGGTTTGCAGTCAGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000472757.5
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
CDS CCA 90 bp TGTCAGCCCAGCCGTGTCCGCAACCCGTTTCTGGCCGGCTCCTTTTaGACACAGTCCCTTCTGGGTACTAATCATCCACGCTCACCCCAG +
Preference number: 5 (lower is better)
Translates to: CQPSRVRNPFLAGSF*TQSLLGTNHPRSPQ
Trigger: CTGGGGTGAGCGTGGATGATTAGTACCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAGAAACGGGTTGCGGACACGGCTGGGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS CCA 90 bp TGGGGGCTGCCTTCTGTCAGCCCAGCCGTGTCCGCAACCCGTTTCTaGCCGGCTCCTTTTGGACACAGTCCCTTCTGGGTACTAATCATC +
Preference number: 5 (lower is better)
Translates to: WGLPSVSPAVSATRF*PAPFGHSPFWVLII
Trigger: GATGATTAGTACCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAGAAACGGGTTGCGGACACGGCTGGGCTGACAGAAGGCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS GCA 90 bp ATTGAAGAGGGCCTGCAGCATCAGAGTCAGGATACGGCAGCTGACTaGAAACCTCAGCACCTCCTTCCGGGATGGGTCCTGGGGCCACAT +
Preference number: 5 (lower is better)
Translates to: IEEGLQHQSQDTAAD*KPQHLLPGWVLGPH
Trigger: ATGTGGCCCCAGGACCCATCCCGGAAGGAGGTGCTGAGGTTTGCAGTCAGCTGCCGTATCCTGACTCTGATGCTGCAGGCCCTCTTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000472757.5
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
CDS CCA 90 bp CCAGAAAGGGAGCCAAGTTGGCCAATGGCAACAGTACTCTTTCCTTaGCACAAGGGGGCGCCTGCTGCTTACTCCATCGCCAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PEREPSWPMATVLFP*HKGAPAAYSIARRP
Trigger: AGGCCTCCTGGCGATGGAGTAAGCAGCAGGCGCCCCCTTGTGCCAAGGAAAGAGTACTGTTGCCATTGGCCAACTTGGCTCCCTTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674317.1
CDS-3UTR CAA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGCGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: CQVHPPSWAPVTRFLGMMVLLPG*SSLRPP
Trigger: GGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...CATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS GCA 90 bp AGGATTATGACCCAGGTCACCCAAACGCCTAGCCCAGTACTTCCATaGCGCAGCCTGCCCTTGCTAGGTATGCTTAGGGTAGTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RIMTQVTQTPSPVLP*RSLPLLGMLRVVGP
Trigger: GGGCCCAACTACCCTAAGCATACCTAGCAAGGGCAGGCTGCGGCATGGAAGTACTGGGCTAGGCGTTTGGGTGACCTGGGTCATAATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CCA 90 bp TCTGAGAATCTGGGACATCCTGTTGAACGGCAGCTCTGGACCCTCTaGGTAAGACTAACACCCCCTGCGCAGGCTGGAGAAGTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: SENLGHPVERQLWTL*VRLTPPAQAGEVAL
Trigger: CAGAGCGACTTCTCCAGCCTGCGCAGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTGCCGTTCAACAGGATGTCCCAGATTCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CCA 90 bp TGGGCCCTATCTGAGAATCTGGGACATCCTGTTGAACGGCAGCTCTaGACCCTCTGGGTAAGACTAACACCCCCTGCGCAGGCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: WALSENLGHPVERQL*TLWVRLTPPAQAGE
Trigger: TTCTCCAGCCTGCGCAGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTGCCGTTCAACAGGATGTCCCAGATTCTCAGATAGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CAA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGACACTGACCAGCCCGTaGGAGCGTACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQTLTSP*ERTPVA
Trigger: TGCCACTGGGGTACGCTCCAACGGGCTGGTCAGTGT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTCGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ARSERKPCPAHARCTHLARGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGCGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS GCA 90 bp AAGGCAAAGAGGAGTACACTAGTCCAGACTCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTCAGGAGGGCAAACAAAGCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: KAKRSTLVQTRPLSS*PMALNVRRANKASE
Trigger: CTCAGAAGCTTTGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCGAGTCTGGACTAGTGTACTCCTCTTTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTACACTGACCAGCCCGTaGGAGCGTACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: VQAYTILCGLLPACQLMPTLTSP*ERTPVA
Trigger: TGCCACTGGGGTACGCTCCAACGGGCTGGTCAGTGT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTACACTGACCAGCCCGTaGGAGCGTACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSTLTSP*ERTPVA
Trigger: TGCCACTGGGGTACGCTCCAACGGGCTGGTCAGTGT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAGGCAGAGCCAAGGGTGAGTGGTCACGTATGTCCAAGTTGCCCAGGCAACCAGTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: KAEPRVSGHVCPSCPGNQSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...CTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTGGCTCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CAA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATTCTACCGGCTTCCATTaGACAGCTTCCCTCCCGCCA +
Preference number: 5 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDSTGFH*TASLPP
Trigger: TGGCGGGAGGGAAGCTGTCAAATGGAAGCCGGTAGA...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS TCA 90 bp CAGCTGCCCCATGGCACTGAATGTCAGGAGGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAAGACATTGGCAGGGCTGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: QLPHGTECQEGKQSF*VTSCQEDIGRAETE
Trigger: TTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTCCAAGTTGCCCAGGCAACCAGTATAGCCACTGGTGCAGCCAGTAGAAAATTGGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VQVAQATSIATGAASRKLVLLPG*SSLRPL
Trigger: GAGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...CAATTTTCTACTGGCTGCACCAGTGGCTATACTGGTTGCCTGGGCAACTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CAA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFVLLPG*SSLRPL
Trigger: GAGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674222.1
CDS-3UTR CAA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGGCTGCCAGGAAGACATaGGCAGGGCTGAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQAARKT*AGLRQK
Trigger: TTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGC...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATGCTGCCAGGAAGACATaGGCAGGGCTGAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDAARKT*AGLRQK
Trigger: TTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGC...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTACACTGACCAGCCCGTaGGAGCGTACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVTLTSP*ERTPVA
Trigger: TGCCACTGGGGTACGCTCCAACGGGCTGGTCAGTGT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAACACTGACCAGCCCGTaGGAGCGTACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLTLTSP*ERTPVA
Trigger: TGCCACTGGGGTACGCTCCAACGGGCTGGTCAGTGT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ARSERKPCPAHARCTHLASQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTTCTGGCCGGCTCCTTTaGGACACAGTCCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPSGRLL*DTVPSG
Trigger: CCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAGA...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CAA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGTGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: AETGPQHFLHARWKSLDLCQEGH*VSWQKA
Trigger: TGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCA...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGTGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQCQEGH*VSWQKA
Trigger: TGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCA...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGTCCAGCTCATGCCAGGTGCACCCACCTAGCTGGGCTCCTGTTACAAGGTTTCGAAAAAGCCTTGGCATaGAGAATGCATGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: CPAHARCTHLAGLLLQGFEKALA*RMHEEA
Trigger: GGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTC...GAAACCTTGTAACAGGAGCCCAGCTAGGTGGGTGCACCTGGCATGAGCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGGTCCAAGGCAGGAAGTaGCAATGTAGGAGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQVQGRK*QCRSSP
Trigger: GGGACTACTCCTACATTGCAACTTCCTGCCTTGGAC...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSADPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VQAYTILCGLLPACQLMPDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTATCTGGCCGGCTCCTTTaGGACACAGTCCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLSGRLL*DTVPSG
Trigger: CCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAGA...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374145.6
ENST00000674273.1
CDS-3UTR CAA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTTGCCGCAGCCTGCCCTaGCTAGGTATGCTTAGGGTA +
Preference number: 5 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSACRSLP*LGMLRV
Trigger: TACCCTAAGCATACCTAGCAAGGGCAGGCTGCGGCA...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CAA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILNYSQE*HSVEEE
Trigger: CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTTGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPCQEGH*VSWQKA
Trigger: TGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCA...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGCAGCGTCAGAGAGAAAACCTaGTCCAGCTCATGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KQDPNTSCTQGGSLWICSVREKT*SSSCQV
Trigger: CACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGAC...GCTGCAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAGGCAGAGCCAAGGGTGAGTGGTCACGTATGTCCAAGTTGCCCAGGCAACCAGGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTT +
Preference number: 5 (lower is better)
Translates to: KAEPRVSGHVCPSCPGNQAWQTE*GVGIIL
Trigger: AAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...CTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTGGCTCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CAA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCACACTGACCAGCCCGTaGGAGCGTACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPTLTSP*ERTPVA
Trigger: TGCCACTGGGGTACGCTCCAACGGGCTGGTCAGTGT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTG +
Preference number: 5 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDAWQTE*GVGIIL
Trigger: CAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCATCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTATTTCTGGGGACCTTTaGTCCTGGTGGGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSISGDL*SWWGVL
Trigger: GAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAAT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTATTTCTGGGGACCTTTaGTCCTGGTGGGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAISGDL*SWWGVL
Trigger: GAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAAT...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAGTCCAAGGCAGGAAGTaGCAATGTAGGAGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQVQGRK*QCRSSP
Trigger: GGGACTACTCCTACATTGCAACTTCCTGCCTTGGAC...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAGTCCAAGGCAGGAAGTaGCAATGTAGGAGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPVQGRK*QCRSSP
Trigger: GGGACTACTCCTACATTGCAACTTCCTGCCTTGGAC...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAACAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTAGA +
Preference number: 5 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAVLLPG*SSLRPR
Trigger: TCTAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTAGA +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSVLLPG*SSLRPR
Trigger: TCTAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CAA 90 bp ATTATCCCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: IIPQKEAKRRAKNPVLLPDGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...AGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGGGATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAAGGGGTGATCATCGTTaGCCAAGAAGGGCACTTGGT +
Preference number: 5 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPRGDHR*PRRALG
Trigger: ACCAAGTGCCCTTCTTGGCAAACGATGATCACCCCT...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTATGGAAGTCTCTGGATTaGCAGCTGTTGGCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILWKSLD*QLLARR
Trigger: TCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCA...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATTGGAAGTCTCTGGATTaGCAGCTGTTGGCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDWKSLD*QLLARR
Trigger: TCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCA...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAACACCTAGCTGTGGCATaGTTAGGCCTCAGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQHLAVA*LGLRVN
Trigger: GTTTACCCTGAGGCCTAACAATGCCACAGCTAGGTG...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS CCA 90 bp GGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTaGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: GQQRQFQCVFLLSDP*VKLASNLSLESPGH
Trigger: ATGACCTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACACTGACCAGCCCGTaGGAGCGTACCCCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYTLTSP*ERTPVA
Trigger: TGCCACTGGGGTACGCTCCAACGGGCTGGTCAGTGT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATGAAAAAGCCTTGGCATaGAGAATGCATGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDEKALA*RMHEEA
Trigger: GGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTC...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLAAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCCAGAAGCACCAAGGCGGTTCATTTCCCTCTGCAATCCGGTAGCCCTTGTCTATTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRSTKAVHFPLQSGSPCLFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...TAGACAAGGGCTACCGGATTGCAGAGGGAAATGAACCGCCTTGGTGCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CAA 90 bp GCGCAGTGGCGCAAACTCAGCTCACTGAAACCTCCGCCTTCCAAGTTCAAGCAATTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: AQWRKLSSLKPPPSKFKQFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...TTGCTTGAACTTGGAAGGCGGAGGTTTCAGTGAGCTGAGTTTGCGCCACTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: VQAYTILCGLLPACQLMPSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTATTTCTGGGGACCTTTaGTCCTGGTGGGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVISGDL*SWWGVL
Trigger: GAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAAT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTGTCCAAGGCAGGAAGTaGCAATGTAGGAGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSVQGRK*QCRSSP
Trigger: GGGACTACTCCTACATTGCAACTTCCTGCCTTGGAC...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTGTCCAAGGCAGGAAGTaGCAATGTAGGAGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPVQGRK*QCRSSP
Trigger: GGGACTACTCCTACATTGCAACTTCCTGCCTTGGAC...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTGGCGGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SFHLGLTYNLPIPAAVLADGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...CGCCAACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSCQEGH*VSWQKA
Trigger: TGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCA...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTAGGGGTGATCATCGTTaGCCAAGAAGGGCACTTGGT +
Preference number: 5 (lower is better)
Translates to: VQAYTILCGLLPACQLMPRGDHR*PRRALG
Trigger: ACCAAGTGCCCTTCTTGGCAAACGATGATCACCCCT...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCACTGGATTTGCAGCTGTaGGCAAGGAGAAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPLDLQL*ARRKGT
Trigger: TGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAG...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTGTCAGAGAGAAAACCTaGTCCAGCTCATGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPVREKT*SSSCQV
Trigger: CACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGAC...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTCACCTAGCTGTGGCATaGTTAGGCCTCAGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSHLAVA*LGLRVN
Trigger: GTTTACCCTGAGGCCTAACAATGCCACAGCTAGGTG...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS TCA 90 bp GAAAGAAGGCAAAGTTGTGCTCATACAGGTAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCATCCCAGTGAGACAGGCCGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: ERRQSCAHTGSHAQQ*TRSVQHPSETGRPE
Trigger: TTCTGGGCGGCCTGTCTCACTGGGATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCTACCTGTATGAGCACAACTTTGCCTTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS TCA 90 bp CTCAGAGGATTCAGCATCGTTAGAGAAGAGAAAAAGCCTTGGCATTaGGAATGCATGAGGAAGCCAACACTGACCAGCCCGTTGGAGCGT +
Preference number: 5 (lower is better)
Translates to: LRGFSIVREEKKPWH*ECMRKPTLTSPLER
Trigger: ACGCTCCAACGGGCTGGTCAGTGTTGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTCTCTTCTCTAACGATGCTGAATCCTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS CCA 90 bp TTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCCAAGGCAGGAAGTTGCAATGTAGGA +
Preference number: 5 (lower is better)
Translates to: FYFQTPGLSWLPTCP*RVQVMSKAGSCNVG
Trigger: TCCTACATTGCAACTTCCTGCCTTGGACATGACCTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS CCA 90 bp GGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTaGCTTCCAACCTGTCCCTGGAGAGTCCAGGTCATGTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: GSSNVYFYFQTPGLS*LPTCPWRVQVMSKA
Trigger: TGCCTTGGACATGACCTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS CCA 90 bp CTCCGTTGGTGGATTTCTTGTTTCTCAGGATTCCAAAGCCTTATGTaGTTTCAGTTATCTGCCCTCCAAACGAAGCCAGGGGCCGGGTTA +
Preference number: 5 (lower is better)
Translates to: LRWWISCFSGFQSLM*FQLSALQTKPGAGL
Trigger: TAACCCGGCCCCTGGCTTCGTTTGGAGGGCAGATAACTGAAACCACATAAGGCTTTGGAATCCTGAGAAACAAGAAATCCACCAACGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS-3UTR CAA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATGCTGCCAGGAAGACATaGGCAGGGCTGAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNAARKT*AGLRQK
Trigger: TTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGC...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTG +
Preference number: 5 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPAWQTE*GVGIIL
Trigger: CAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCTTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: QFTNSCRRVGASDPCLLIFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: MDDTEPNSRLAQGMGKSSSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...GCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTTGCCGCAGCCTGCCCTaGCTAGGTATGCTTAGGGTA +
Preference number: 5 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVCRSLP*LGMLRV
Trigger: TACCCTAAGCATACCTAGCAAGGGCAGGCTGCGGCA...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CAA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: ARSERKPCPAHARCTHLATGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVNYSQE*HSVEEE
Trigger: CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATT...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVDGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTAGGGGTGATCATCGTTaGCCAAGAAGGGCACTTGGT +
Preference number: 5 (lower is better)
Translates to: KERPPKLLPRVALGGGGVRGDHR*PRRALG
Trigger: ACCAAGTGCCCTTCTTGGCAAACGATGATCACCCCT...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGGGGTGATCATCGTTaGCCAAGAAGGGCACTTGGT +
Preference number: 5 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLRGDHR*PRRALG
Trigger: ACCAAGTGCCCTTCTTGGCAAACGATGATCACCCCT...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTTGGAAGTCTCTGGATTaGCAGCTGTTGGCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAWKSLD*QLLARR
Trigger: TCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCA...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGGTCAGAGAGAAAACCTaGTCCAGCTCATGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GPTLLLPLHCSGLYHLVWVREKT*SSSCQV
Trigger: CACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGAC...CCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GGGACCTACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATCACCTAGCTGTGGCATaGTTAGGCCTCAGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: GTYKRLHHSPPPPEEYHHHLAVA*LGLRVN
Trigger: GTTTACCCTGAGGCCTAACAATGCCACAGCTAGGTG...ATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTAGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTCACCTAGCTGTGGCATaGTTAGGCCTCAGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: KERPPKLLPRVALGGGGVHLAVA*LGLRVN
Trigger: GTTTACCCTGAGGCCTAACAATGCCACAGCTAGGTG...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTCAGCTGTCCTAGTGCTGGGGCGATGGATGGGAAATGCTTATTGGCCAGGCTGTCAGTTTCAAATCCCTaGAGCCTGCACATATTACAT +
Preference number: 5 (lower is better)
Translates to: LSCPSAGAMDGKCLLARLSVSNP*SLHILH
Trigger: ATGTAATATGTGCAGGCTCAAGGGATTTGAAACTGA...CAGCCTGGCCAATAAGCATTTCCCATCCATCGCCCCAGCACTAGGACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: YTILCGLLPACQLMPLMKVLLPG*SSLRPL
Trigger: GAGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000078527.9
ENST00000674222.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTGAAAAAGCCTTGGCATaGAGAATGCATGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSEKALA*RMHEEA
Trigger: GGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTC...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTG +
Preference number: 5 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLAWQTE*GVGIIL
Trigger: CAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: YTILCGLLPACQLMPLMKDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGACCCCTGGGTTAAGTaGGCTTCCAACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSDPWVK*ASNLSL
Trigger: CAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYVLLPG*SSLRPP
Trigger: TGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374145.6
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILTGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNNYSQE*HSVEEE
Trigger: CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATT...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCCCAAAAGGAGGCAAAGAGGAGAGCGAAGAACCCAGTGCTCCTACCTCGGCAACATTTTCAGAAGCATTaGACTCTGAACCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: PQKEAKRRAKNPVLLPRQHFQKH*TLNQIL
Trigger: GAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATG...TTGCCGAGGTAGGAGCACTGGGTTCTTCGCTCTCCTCTTTGCCTCCTTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GAAATAAAAGAGGTGATGGATGATACAGAGCCAAACTCTCGTCTGGCTCAAGGATGCCAAGAAGGGCACTaGGTGTCTTGGCAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: EIKEVMDDTEPNSRLAQGCQEGH*VSWQKA
Trigger: TGCCTTCTGCCAAGACACCAAGTGCCCTTCTTGGCA...TCCTTGAGCCAGACGAGAGTTTGGCTCTGTATCATCCATCACCTCTTTTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAACACCTAGCTGTGGCATaGTTAGGCCTCAGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKHLAVA*LGLRVN
Trigger: GTTTACCCTGAGGCCTAACAATGCCACAGCTAGGTG...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSVLLPG*SSLRPP
Trigger: AGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACAC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS-3UTR CAA 90 bp GCAAGGTCAGAGAGAAAACCTTGTCCAGCTCATGCCAGGTGCACCCACCTAGCTATGAAGAACAAGAAATaGAGTGATGCTACCGAAATC +
Preference number: 5 (lower is better)
Translates to: ARSERKPCPAHARCTHLAMKNKK*SDATEI
Trigger: GATTTCGGTAGCATCACTCAATTTCTTGTTCTTCAT...AGCTAGGTGGGTGCACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGACCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGCTGCCAGGAAGACATaGGCAGGGCTGAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSAARKT*AGLRQK
Trigger: TTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AGCTGGGCTCCTGTTACAAGGTTTCTGGGCATGATGAGATCTAGTGTGAAGGTTGAAAAAGCCTTGGCATaGAGAATGCATGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SWAPVTRFLGMMRSSVKVEKALA*RMHEEA
Trigger: GGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTC...AACCTTCACACTAGATCTCATCATGCCCAGAAACCTTGTAACAGGAGCCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGGGCAGCAGAGGCAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAGAAAAAGCCTTGGCATaGAGAATGCATGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: QGSRGSSNVYFYFQTPGLEKALA*RMHEEA
Trigger: GGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTC...TAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTGCCTCTGCTGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTTTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: VQAYTILCGLLPACQLMPFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTGAGAACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTTTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: HLRTAQQAPYLPDVTAFPFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...AGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTTCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAATTTCTGGGGACCTTTaGTCCTGGTGGGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSISGDL*SWWGVL
Trigger: GAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAAT...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AGCCAACATTCCAGTAGACATCCTGGATATAGCTGTATATTAGTGGAACATCCCATTTCTGGGGACCTTTaGTCCTGGTGGGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: SQHSSRHPGYSCILVEHPISGDL*SWWGVL
Trigger: GAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAAT...GGGATGTTCCACTAATATACAGCTATATCCAGGATGTCTACTGGAATGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CAA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACATTTCTGGGGACCTTTaGTCCTGGTGGGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: FITATTLFRPIPSCVDCYISGDL*SWWGVL
Trigger: GAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAAT...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGTCTGGCCGGCTCCTTTaGGACACAGTCCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRSGRLL*DTVPSG
Trigger: CCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAGA...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGCGGGGTTTTGCCATGTaGGCCAGGCCGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRRGFAM*ARPVSN
Trigger: GTTTGAGACCGGCCTGGCCAACATGGCAAAACCCCG...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACCATTTCATTCCACCTaGGACTTACGTACAATTTAC +
Preference number: 5 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILPFHST*DLRTIY
Trigger: GTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGG...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCAGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPDGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TTGCACTCGGTGGAGGAGGAGTTTCTTCTAATTGCTGAAAACAGGAGAACTGGACTGGATTTGCAGCTGTaGGCAAGGAGAAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: LHSVEEEFLLIAENRRTGLDLQL*ARRKGT
Trigger: TGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAG...TCCAGTTCTCCTGTTTTCAGCAATTAGAAGAAACTCCTCCTCCACCGAGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAGTCAGAGAGAAAACCTaGTCCAGCTCATGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRVREKT*SSSCQV
Trigger: CACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGAC...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GCTGAAACAGGACCCCAACACTTCCTGCACGCAAGGTGGAAGTCTCTGGATTTGTCAGTTTCAAATCCCTaGAGCCTGCACATATTACAT +
Preference number: 5 (lower is better)
Translates to: AETGPQHFLHARWKSLDLSVSNP*SLHILH
Trigger: ATGTAATATGTGCAGGCTCAAGGGATTTGAAACTGA...CAAATCCAGAGACTTCCACCTTGCGTGCAGGAAGTGTTGGGGTCCTGTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAATTTACCAATTCCTGCCGCCGTGTTGGCGCCTCTGACCCATGTCTACTGATCTCAGTTTCAAATCCCTaGAGCCTGCACATATTACAT +
Preference number: 5 (lower is better)
Translates to: QFTNSCRRVGASDPCLLISVSNP*SLHILH
Trigger: ATGTAATATGTGCAGGCTCAAGGGATTTGAAACTGA...GATCAGTAGACATGGGTCAGAGGCGCCAACACGGCGGCAGGAATTGGTAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTGGAGAGTCCAGATAAATCCTTCTCCGTaGGTGGATTTCTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YFQTPGLSWLPTCPWRVQINPSP*VDFLFL
Trigger: GAGAAACAAGAAATCCACCAACGGAGAAGGATTTAT...CTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS-3UTR CAA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGATCTGGGATGATGGCATaGAAGAGGGCCTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRSGMMA*KRALVT
Trigger: TGTCACCAAGGCCCTCTTCAATGCCATCATCCCAGA...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGGCCTCTCTGCCACTaGACCATGCTTGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYRPLCH*TMLAFF
Trigger: GAAGAATGCAAGCATGGTCAAGTGGCAGAGAGGCCT...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000078527.9
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACATCTGGGATGATGGCATaGAAGAGGGCCTGCAGCATC +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTSGMMA*KRACSI
Trigger: GATGCTGCAGGCCCTCTTCAATGCCATCATCCCAGA...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGCTGCCAGGAAGACATaGGCAGGGCTGAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTAARKT*AGLRQK
Trigger: TTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGCTGCCAGGAAGACATaGGCAGGGCTGAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAAARKT*AGLRQK
Trigger: TTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AGCCAACATTCCAGTAGACATCCTGGATATAGCTGTATATTAGTGGAACATCCCGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SQHSSRHPGYSCILVEHPAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...GGGATGTTCCACTAATATACAGCTATATCCAGGATGTCTACTGGAATGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472757.5
CDS-3UTR CAA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: FITATTLFRPIPSCVDCYAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTGTCCAAGGCAGGAAGTaGCAATGTAGGAGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIVQGRK*QCRSSP
Trigger: GGGACTACTCCTACATTGCAACTTCCTGCCTTGGAC...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTAAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: LVWLKEWAKVAQQGPVILRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...TAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACTCTCGTCTGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: NSRLAQGMGKSSSAGASDRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...ATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCAGACGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGTGGCATTGTTAGGCCTCAGGGTAAACAGGAAACTTCCTGCCTTGGGTCCTTCGATTACCCATCTGTTTaGAAGAGTTTCTGCTTACTG +
Preference number: 5 (lower is better)
Translates to: CGIVRPQGKQETSCLGSFDYPSV*KSFCLL
Trigger: CAGTAAGCAGAAACTCTTCAAAACAGATGGGTAATC...GAAGGACCCAAGGCAGGAAGTTTCCTGTTTACCCTGAGGCCTAACAATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGGCTCAAGGAATGGGCAAAAGTAGCTCAGCAGGGGCCAGTGATCTTACTACCAGATTACCCATCTGTTTaGAAGAGTTTCTGCTTACTG +
Preference number: 5 (lower is better)
Translates to: WLKEWAKVAQQGPVILLPDYPSV*KSFCLL
Trigger: CAGTAAGCAGAAACTCTTCAAAACAGATGGGTAATC...TGGTAGTAAGATCACTGGCCCCTGCTGAGCTACTTTTGCCCATTCCTTGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GAACAGTTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTGATTACCCATCTGTTTaGAAGAGTTTCTGCTTACTG +
Preference number: 5 (lower is better)
Translates to: EQFLPTNWRDTRAGVIIVDYPSV*KSFCLL
Trigger: CAGTAAGCAGAAACTCTTCAAAACAGATGGGTAATC...AACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAACTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGGATGGGAAATGCTTATaGGCCAGGCTGACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGDGKCL*ARLTRS
Trigger: GCTTCTGGTCAGCCTGGCCAATAAGCATTTCCCATC...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACTGGATTTGCAGCTGTaGGCAAGGAGAAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPLDLQL*ARRKGT
Trigger: TGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATTTCATTCCACCTTGGACTTACGTACAATTTACCAATTCCTGCCGCCGTGTTTGGAAGTCTCTGGATTaGCAGCTGTTGGCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: HFIPPWTYVQFTNSCRRVWKSLD*QLLARR
Trigger: TCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCA...AACACGGCGGCAGGAATTGGTAAATTGTACGTAAGTCCAAGGTGGAATGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTCAGAGAGAAAACCTaGTCCAGCTCATGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KWSHFITATTLFRPIPSCVREKT*SSSCQV
Trigger: CACCTGGCATGAGCTGGACAAGGTTTTCTCTCTGAC...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTTCAAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGAGGAAACTTCCTGCCTaGGGTCCTTCATGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: VSNPLSLHILHFQMTVRGRKLPA*GPSCPS
Trigger: AGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCCT...CCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACAGGAAACTTCCTGCCTaGGGTCCTTCATGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNRKLPA*GPSCPS
Trigger: AGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCCT...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTAGGAAACTTCCTGCCTaGGGTCCTTCATGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: YHLVWTVTSLSANAFDEIRKLPA*GPSCPS
Trigger: AGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCCT...AATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAGCATTGAAGAGGGCCTaGGTGACACCTGAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: YTILCGLLPACQLMPLMKALKRA*VTPEEF
Trigger: GAACTCTTCAGGTGTCACCAAGGCCCTCTTCAATGC...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674335.1
CDS-3UTR CAA 90 bp TTTCTGCCAACTAACTGGAGGGACACTAGGGCAGGGGTGATCATCGTTTGCCAAATGAAGAACAAGAAATaGAGTGATGCTACCGAAATC +
Preference number: 5 (lower is better)
Translates to: FLPTNWRDTRAGVIIVCQMKNKK*SDATEI
Trigger: GATTTCGGTAGCATCACTCAATTTCTTGTTCTTCAT...TTGGCAAACGATGATCACCCCTGCCCTAGTGTCCCTCCAGTTAGTTGGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAGAAAAAGCCTTGGCATaGAGAATGCATGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: CIIHHHPLKNIIISHGFREKALA*RMHEEA
Trigger: GGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTC...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTG +
Preference number: 5 (lower is better)
Translates to: FITATTLFRPIPSCVDCYAWQTE*GVGIIL
Trigger: CAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCAGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTG +
Preference number: 5 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSAWQTE*GVGIIL
Trigger: CAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KETVNRMVKGQLLVIKSAAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TCCTGCCTTGGGTCCTTCATGTCCCTCTCCCAGACTATTAAAGAGACTGTTAATTTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: SCLGSFMSLSQTIKETVNFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...ATTAACAGTCTCTTTAATAGTCTGGGAGAGGGACATGAAGGACCCAAGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATTCTCAACAGCGGCTCTaGATCCTGAAGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: KSLEPAHITFSDDSERVYSQQRL*ILKQVS
Trigger: GCTCACTTGCTTCAGGATCAAGAGCCGCTGTTGAGA...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGATTTCTGGGGACCTTTaGTCCTGGTGGGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRISGDL*SWWGVL
Trigger: GAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAAT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: KERPPKLLPRVALGGGGVTGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTNYSQE*HSVEEE
Trigger: CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATT...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GAAAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGGATTACCCATCTGTTTaGAAGAGTTTCTGCTTACTG +
Preference number: 5 (lower is better)
Translates to: ERKDHLNYSQELHSVEEEDYPSV*KSFCLL
Trigger: CAGTAAGCAGAAACTCTTCAAAACAGATGGGTAATC...CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTGATTACCCATCTGTTTaGAAGAGTTTCTGCTTACTG +
Preference number: 5 (lower is better)
Translates to: VQAYTILCGLLPACQLMPDYPSV*KSFCLL
Trigger: CAGTAAGCAGAAACTCTTCAAAACAGATGGGTAATC...AGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACCTGGATTTGCAGCTGTaGGCAAGGAGAAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYLDLQL*ARRKGT
Trigger: TGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAG...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAAGGAAACTTCCTGCCTaGGGTCCTTCATGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTRKLPA*GPSCPS
Trigger: AGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCCT...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAATCCCTTGAGCCTGCACATATTACATTTTCAGATGACAGTGAGAGGGTCTATAGGAAACTTCCTGCCTaGGGTCCTTCATGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: KSLEPAHITFSDDSERVYRKLPA*GPSCPS
Trigger: AGAGGGACATGAAGGACCCAAGGCAGGAAGTTTCCT...ATAGACCCTCTCACTGTCATCTGAAAATGTAATATGTGCAGGCTCAAGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTATGAAGAACAAGAAATaGAGTGATGCTACCGAAATC +
Preference number: 5 (lower is better)
Translates to: LHCSGLYHLVWTVTSLSAMKNKK*SDATEI
Trigger: GATTTCGGTAGCATCACTCAATTTCTTGTTCTTCAT...AGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACGAAAAAGCCTTGGCATaGAGAATGCATGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: HLVWTVTSLSANAFDEIYEKALA*RMHEEA
Trigger: GGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTC...GTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACAGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTG +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTAWQTE*GVGIIL
Trigger: CAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCCAGTAGAAAATaGGGCACCTGCTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRAASRK*GTCLSS
Trigger: TGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGC...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTAAAATTTGCCCTAGCCAGGACCAGAAGGGGCTCTCTAGTGTCTGACACTTCTAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: LKFALARTRRGSLVSDTSRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...AGAAGTGTCAGACACTAGAGAGCCCCTTCTGGTCCTGGCTAGGGCAAATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGCAGGCCTATACCATCTaGTGTGGACTGTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQQAYTI*CGLLPA
Trigger: GGCTGGTAACAGTCCACACAAGATGGTATAGGCCTG...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAATTACTCCCAAGAGTaGCACTCGGTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRNYSQE*HSVEEE
Trigger: CTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAGGAAAGACCACCTAAATTACTCCCAAGAGTTGCACTCGGTGGAGGAGGAGTTCCATTTCATTCCACCTaGGACTTACGTACAATTTAC +
Preference number: 5 (lower is better)
Translates to: KERPPKLLPRVALGGGGVPFHST*DLRTIY
Trigger: GTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGG...AACTCCTCCTCCACCGAGTGCAACTCTTGGGAGTAATTTAGGTGGTCTTTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp ATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTGGATTTGCAGCTGTaGGCAAGGAGAAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: ILCGLLPACQLMPLMKFTLDLQL*ARRKGT
Trigger: TGTTCCCTTTCTCCTTGCCAACAGCTGCAAATCCAG...TGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCCCGTTGGTGGATTTCTaGTTTCTCAGGATTCCAAAG +
Preference number: 5 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPPLVDF*FLRIPK
Trigger: CTTTGGAATCCTGAGAAACAAGAAATCCACCAACGG...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS-3UTR CAA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGGCCTGGCAGACAGAATaGGGTGTAGGCATAATACTG +
Preference number: 5 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQAWQTE*GVGIIL
Trigger: CAGTATTATGCCTACACCCAATTCTGTCTGCCAGGC...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATCATTTTCAGAAGCATTaGACTCTGAACCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: HCSGLYHLVWTVTSLSANHFQKH*TLNQIL
Trigger: GAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATG...ATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGTGGAAGTCTCTGGATTaGCAGCTGTTGGCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRWKSLD*QLLARR
Trigger: TCTCCTTGCCAACAGCTGCAAATCCAGAGACTTCCA...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTGTGGACTGTTACACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: FITATTLFRPIPSCVDCYTGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...GTAACAGTCCACACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCACCATTTCATTCCACCTaGGACTTACGTACAATTTAC +
Preference number: 5 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPPFHST*DLRTIY
Trigger: GTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGG...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AACGGCACAACAGGCACCTTATCTGCCAGATGTTACTGCTTTCCCTCATTGAAACATTTTCAGAAGCATTaGACTCTGAACCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: NGTTGTLSARCYCFPSLKHFQKH*TLNQIL
Trigger: GAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATG...TTTCAATGAGGGAAAGCAGTAACATCTGGCAGATAAGGTGCCTGTTGTGCCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCATGAAGAACAAGAAATaGAGTGATGCTACCGAAATC +
Preference number: 5 (lower is better)
Translates to: NVYFYFQTPGLSWLPTCPMKNKK*SDATEI
Trigger: GATTTCGGTAGCATCACTCAATTTCTTGTTCTTCAT...GGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TACAAGAGACTGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCAATGAAGAACAAGAAATaGAGTGATGCTACCGAAATC +
Preference number: 5 (lower is better)
Translates to: YKRLHHSPPPPEEYHHFPMKNKK*SDATEI
Trigger: GATTTCGGTAGCATCACTCAATTTCTTGTTCTTCAT...TGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCAGTCTCTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGTTCTCTAGGGTCTTATaGTTCTTGCTCCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRFSRVL*FLLLCS
Trigger: GCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAA...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TGCATCATTCACCACCACCCCCTGAAGAATATCATCATTTCCCATGGTTTCAGAAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: CIIHHHPLKNIIISHGFRRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...TCTGAAACCATGGGAAATGATGATATTCTTCAGGGGGTGGTGGTGAATGATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAAGAGACTGTTAATAGGATGGTAAAAGGACAGCTGCTGGTCATAAAATCAGCCACTGGGGTGATTCTGTaGTTTAAGGCAGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: KETVNRMVKGQLLVIKSATGVIL*FKAVLK
Trigger: CTTAAGAACTGCCTTAAACAACAGAATCACCCCAGT...GGCTGATTTTATGACCAGCAGCTGTCCTTTTACCATCCTATTAACAGTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCACCATTTCATTCCACCTaGGACTTACGTACAATTTAC +
Preference number: 5 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSPFHST*DLRTIY
Trigger: GTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGG...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATCAGTTTCAAATCCCTaGAGCCTGCACATATTACAT +
Preference number: 5 (lower is better)
Translates to: YTILCGLLPACQLMPLMKSVSNP*SLHILH
Trigger: ATGTAATATGTGCAGGCTCAAGGGATTTGAAACTGA...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp AAATGGTCCCACTTTATTACTGCCACTACACTGTTCAGGCCTATACCATCTTGTTCAGTTTCAAATCCCTaGAGCCTGCACATATTACAT +
Preference number: 5 (lower is better)
Translates to: KWSHFITATTLFRPIPSCSVSNP*SLHILH
Trigger: ATGTAATATGTGCAGGCTCAAGGGATTTGAAACTGA...ACAAGATGGTATAGGCCTGAACAGTGTAGTGGCAGTAATAAAGTGGGACCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp TATACCATCTTGTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAAATGAAGAACAAGAAATaGAGTGATGCTACCGAAATC +
Preference number: 5 (lower is better)
Translates to: YTILCGLLPACQLMPLMKMKNKK*SDATEI
Trigger: GATTTCGGTAGCATCACTCAATTTCTTGTTCTTCAT...TTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACACAAGATGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CAGTTCCAATGTGTATTTTTACTTTCAGACCCCTGGGTTAAGTTGGCTTCCAACAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: QFQCVFLLSDPWVKLASNRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...GTTGGAAGCCAACTTAACCCAGGGGTCTGAAAGTAAAAATACACATTGGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp GTGTGGACTGTTACCAGCCTGTCAGCTAATGCCTTTGATGAAATTTACACTTCACATTTTCAGAAGCATTaGACTCTGAACCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: VWTVTSLSANAFDEIYTSHFQKH*TLNQIL
Trigger: GAGAATTTGGTTCAGAGTCAAATGCTTCTGAAAATG...TGAAGTGTAAATTTCATCAAAGGCATTAGCTGACAGGCTGGTAACAGTCCACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGCCATTTCATTCCACCTaGGACTTACGTACAATTTAC +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRPFHST*DLRTIY
Trigger: GTAAATTGTACGTAAGTCCAAGGTGGAATGAAATGG...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431541.6
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGATGAAGAACAAGAAATaGAGTGATGCTACCGAAATC +
Preference number: 5 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQMKNKK*SDATEI
Trigger: GATTTCGGTAGCATCACTCAATTTCTTGTTCTTCAT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CCAGCTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: PAFKEKEKDYNGHSNDPRRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...CCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS-3UTR CAA 90 bp CTTTCAAAGAGAAAGAGAAAGATTATAATGGACACAGTAATGATCCCAGGGCAGAGGTGTATTTTAGACTaGGAATACGACAATCTTCAC +
Preference number: 5 (lower is better)
Translates to: LSKRKRKIIMDTVMIPGQRCILD*EYDNLH
Trigger: GTGAAGATTGTCGTATTCCAAGTCTAAAATACACCT...CTGCCCTGGGATCATTACTGTGTCCATTATAATCTTTCTCTTTCTCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674335.1
CDS GCA 72 bp AGGGGCCACGGCCCAAGGACCACTCCCGAGGGAGCCTaGAGAGCCCCACCAGGCCACAGGGCCGGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: RGHGPRTTPEGA*RAPPGHRAGSR
Trigger: TCTGCTTCCGGCCCTGTGGCCTGGTGGGGCTCTGCAGGCTCCCTCGGGAGTGGTCCTTGGGCCGTGGCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674202.1
CDS CCA 72 bp AGGCCACAGGGCCGGAAGCAGACGAGGGCGGGAGGCTaGAAAGGAAGAGGCGGCGCCCGAGGCTGCTATGGC +
Preference number: 6 (lower is better)
Translates to: RPQGRKQTRAGG*KGRGGARGCYG
Trigger: GCCATAGCAGCCTCGGGCGCCGCCTCTTCCTTTCCAGCCTCCCGCCCTCGTCTGCTTCCGGCCCTGTGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS CCA 72 bp CTCAGGCCTCCAGGGTCCTCAGAGCCAAAGGCCTCGTaGGGGCTGCCTTCTGTCAGCCCAGCCGTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: LRPPGSSEPKAS*GLPSVSPAVSA
Trigger: TGCGGACACGGCTGGGCTGACAGAAGGCAGCCCCCACGAGGCCTTTGGCTCTGAGGACCCTGGAGGCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374145.6
CDS GCA 72 bp GCAGCTCTGGACCCTCTGGGTAAGACTAACACCCCCTaGGCAGGCTGGAGAAGTCGCTCTGACCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: AALDPLGKTNTP*AGWRSRSDPGS
Trigger: GGACCCTGGGTCAGAGCGACTTCTCCAGCCTGCGCAGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CCA 72 bp GACCCTCTGGGTAAGACTAACACCCCCTGCGCAGGCTaGAGAAGTCGCTCTGACCCAGGGTCCTCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: DPLGKTNTPCAG*RSRSDPGSSEP
Trigger: TGGCTCTGAGGACCCTGGGTCAGAGCGACTTCTCCAGCCTGCGCAGGGGGTGTTAGTCTTACCCAGAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CAA 72 bp TTCACCACCAGGAATTCAGGGGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCCCAGAGGGGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: FTTRNSGVLLPG*SSLRPPRGATA
Trigger: GGCCGTGGCCCCTCTGGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACACCCCTGAATTCCTGGTGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674202.1
CDS GCA 72 bp GGCCTGCAGCATCAGAGTCAGGATACGGCAGCTGACTaGAAACCTCAGCACCTCCTTCCGGGATGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: GLQHQSQDTAAD*KPQHLLPGWVL
Trigger: CAGGACCCATCCCGGAAGGAGGTGCTGAGGTTTGCAGTCAGCTGCCGTATCCTGACTCTGATGCTGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000472757.5
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
CDS CCA 72 bp CCTTCTGTCAGCCCAGCCGTGTCCGCAACCCGTTTCTaGCCGGCTCCTTTTGGACACAGTCCCTTCTGGGTA +
Preference number: 6 (lower is better)
Translates to: PSVSPAVSATRF*PAPFGHSPFWV
Trigger: TACCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAGAAACGGGTTGCGGACACGGCTGGGCTGACAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS CAA 90 bp CCCAGAAAGGGAGCCAAGTTGGCCAATGGCAACAGTACTCTTTCCTaGGCACAAGGGGGCGCCTGCTGCTTACTCCATCGCCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: PRKGAKLANGNSTLS*AQGGACCLLHRQEA
Trigger: GGCCTCCTGGCGATGGAGTAAGCAGCAGGCGCCCCCTTGTGCCAAGGAAAGAGTACTGTTGCCATTGGCCAACTTGGCTCCCTTTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674317.1
CDS TCA 72 bp CGCCAAAGGGTACGCGCCCTTTCCGAGCCAGGATTATaGCCCAGGTCACCCAAACGCCTAGCCCAGTACTTC +
Preference number: 6 (lower is better)
Translates to: RQRVRALSEPGL*PRSPKRLAQYF
Trigger: GAAGTACTGGGCTAGGCGTTTGGGTGACCTGGGTCATAATCCTGGCTCGGAAAGGGCGCGTACCCTTTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CCA 72 bp ACTGCAAACCTCAGCACCTCCTTCCGGGATGGGTCCTaGGGCCACATCCTTTCACCACCAGGAATTCAGGGG +
Preference number: 6 (lower is better)
Translates to: TANLSTSFRDGS*GHILSPPGIQG
Trigger: CCCCTGAATTCCTGGTGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAAGGAGGTGCTGAGGTTTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000472757.5
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
CDS CCA 72 bp CTGGGACATCCTGTTGAACGGCAGCTCTGGACCCTCTaGGTAAGACTAACACCCCCTGCGCAGGCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: LGHPVERQLWTL*VRLTPPAQAGE
Trigger: TTCTCCAGCCTGCGCAGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTGCCGTTCAACAGGATGTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS GCA 72 bp ACCCAGGTCACCCAAACGCCTAGCCCAGTACTTCCATaGCGCAGCCTGCCCTTGCTAGGTATGCTTAGGGTA +
Preference number: 6 (lower is better)
Translates to: TQVTQTPSPVLP*RSLPLLGMLRV
Trigger: TACCCTAAGCATACCTAGCAAGGGCAGGCTGCGGCATGGAAGTACTGGGCTAGGCGTTTGGGTGACCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CCA 72 bp AGCCGTGTCCGCAACCCGTTTCTGGCCGGCTCCTTTTaGACACAGTCCCTTCTGGGTACTAATCATCCACGC +
Preference number: 6 (lower is better)
Translates to: SRVRNPFLAGSF*TQSLLGTNHPR
Trigger: GCGTGGATGATTAGTACCCAGAAGGGACTGTGTCCAAAAGGAGCCGGCCAGAAACGGGTTGCGGACACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374145.6
ENST00000431541.6
ENST00000674273.1
CDS CAA 72 bp ACGCCTAGCCCAGTACTTCCATGCCGCAGCCTGCCCTaGCTAGGTATGCTTAGGGTAGTTGGGCCCTATCTG +
Preference number: 6 (lower is better)
Translates to: TPSPVLPCRSLP*LGMLRVVGPYL
Trigger: CAGATAGGGCCCAACTACCCTAAGCATACCTAGCAAGGGCAGGCTGCGGCATGGAAGTACTGGGCTAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CAA 72 bp GGAGCCAAGTTGGCCAATGGCAACAGTACTCTTTCCTaGGCACAAGGGGGCGCCTGCTGCTTACTCCATCGC +
Preference number: 6 (lower is better)
Translates to: GAKLANGNSTLS*AQGGACCLLHR
Trigger: GCGATGGAGTAAGCAGCAGGCGCCCCCTTGTGCCAAGGAAAGAGTACTGTTGCCATTGGCCAACTTGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674317.1
CDS CAA 90 bp GTCACCCAAACGCCTAGCCCAGTACTTCCATGCCGCAGCCTGCCCTaGCTAGGTATGCTTAGGGTAGTTGGGCCCTATCTGAGAATCTGG +
Preference number: 6 (lower is better)
Translates to: VTQTPSPVLPCRSLP*LGMLRVVGPYLRIW
Trigger: CCAGATTCTCAGATAGGGCCCAACTACCCTAAGCATACCTAGCAAGGGCAGGCTGCGGCATGGAAGTACTGGGCTAGGCGTTTGGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS GCA 72 bp AGGAGTACACTAGTCCAGACTCGGCCCCTCTCCAGCTaGCCCATGGCACTGAATGTCAGGAGGGCAAACAAA +
Preference number: 6 (lower is better)
Translates to: RSTLVQTRPLSS*PMALNVRRANK
Trigger: TTTGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCGAGTCTGGACTAGTGTACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS CCA 72 bp CAGACCCCTGGGTTAAGTTGGCTTCCAACCTGTCCCTaGAGAGTCCAGGTCATGTCCAAGGCAGGAAGTTGC +
Preference number: 6 (lower is better)
Translates to: QTPGLSWLPTCP*RVQVMSKAGSC
Trigger: GCAACTTCCTGCCTTGGACATGACCTGGACTCTCCAGGGACAGGTTGGAAGCCAACTTAACCCAGGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS CCA 72 bp TCTGAGAATCTGGGACATCCTGTTGAACGGCAGCTCTaGACCCTCTGGGTAAGACTAACACCCCCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: SENLGHPVERQL*TLWVRLTPPAQ
Trigger: CTGCGCAGGGGGTGTTAGTCTTACCCAGAGGGTCCAGAGCTGCCGTTCAACAGGATGTCCCAGATTCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CAA 72 bp TTCACCACCAGGAATTCAGGGGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCTCTGCCACTTGACCATG +
Preference number: 6 (lower is better)
Translates to: FTTRNSGVLLPG*SSLRPLCHLTM
Trigger: CATGGTCAAGTGGCAGAGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACACCCCTGAATTCCTGGTGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000078527.9
CDS GCA 72 bp CTCAGGATTCCAAAGCCTTATGTGGTTTCAGTTATCTaGCCTCCAAACGAAGCCAGGGGCCGGGTTAGCCTC +
Preference number: 6 (lower is better)
Translates to: LRIPKPYVVSVI*PPNEARGRVSL
Trigger: GAGGCTAACCCGGCCCCTGGCTTCGTTTGGAGGGCAGATAACTGAAACCACATAAGGCTTTGGAATCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS CCA 72 bp GGTATGCTTAGGGTAGTTGGGCCCTATCTGAGAATCTaGGACATCCTGTTGAACGGCAGCTCTGGACCCTCT +
Preference number: 6 (lower is better)
Translates to: GMLRVVGPYLRI*DILLNGSSGPS
Trigger: AGAGGGTCCAGAGCTGCCGTTCAACAGGATGTCCCAGATTCTCAGATAGGGCCCAACTACCCTAAGCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS TCA 72 bp CATGGCACTGAATGTCAGGAGGGCAAACAAAGCTTCTaGGTAACCAGCTGCCAGGAAGACATTGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: HGTECQEGKQSF*VTSCQEDIGRA
Trigger: AGCCCTGCCAATGTCTTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCCCTCCTGACATTCAGTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS TCA 72 bp TCACCACCAGGAATTCAGGGGTGTTGCTACCAGGATTaGGCTCCCTCAGGCCTCCTTGTAACGGAAACTGTT +
Preference number: 6 (lower is better)
Translates to: SPPGIQGCCYQD*APSGLLVTETV
Trigger: AACAGTTTCCGTTACAAGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACACCCCTGAATTCCTGGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS GCA 72 bp AAAAACCTGGTGAGAACCTCCAAACAGCAGCAGCACTaGAGCGTGGACCACGTACACAAACACCTGAGGACT +
Preference number: 6 (lower is better)
Translates to: KNLVRTSKQQQH*SVDHVHKHLRT
Trigger: AGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGGAGGTTCTCACCAGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431541.6
CDS CAA 72 bp TTCACCACCAGGAATTCAGGGGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTCCTTGTAACGGAAACTGT +
Preference number: 6 (lower is better)
Translates to: FTTRNSGVLLPG*SSLRPPCNGNC
Trigger: ACAGTTTCCGTTACAAGGAGGCCTGAGGGAGCTCAATCCTGGTAGCAACACCCCTGAATTCCTGGTGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455364.2
CDS TCA 72 bp CTGAGTAACCAGCTGCCAGGAAGACATTGGCAGGGCTaGGACAGAAAAGCAGAGCTGCATAAAAGGACTGGT +
Preference number: 6 (lower is better)
Translates to: LSNQLPGRHWQG*DRKAELHKRTG
Trigger: ACCAGTCCTTTTATGCAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGCTGGTTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS TCA 72 bp TCACCACCAGGAATTCAGGGGTGTTGCTACCAGGATTaGGCTCCCTCAGGCCTAGATCAACTAGTTTCACTC +
Preference number: 6 (lower is better)
Translates to: SPPGIQGCCYQD*APSGLDQLVSL
Trigger: GAGTGAAACTAGTTGATCTAGGCCTGAGGGAGCTCAATCCTGGTAGCAACACCCCTGAATTCCTGGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS CAA 72 bp TTCACCACCAGGAATTCAGGGGTGTTGCTACCAGGATaGAGCTCCCTCAGGCCTAGATCAACTAGTTTCACT +
Preference number: 6 (lower is better)
Translates to: FTTRNSGVLLPG*SSLRPRSTSFT
Trigger: AGTGAAACTAGTTGATCTAGGCCTGAGGGAGCTCAATCCTGGTAGCAACACCCCTGAATTCCTGGTGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS TCA 72 bp CAAAGTTGTGCTCATACAGGTAGCCATGCTCAGCAATaGACAAGAAGTGTTCAGCATCCCAGTGAGACAGGC +
Preference number: 6 (lower is better)
Translates to: QSCAHTGSHAQQ*TRSVQHPSETG
Trigger: GCCTGTCTCACTGGGATGCTGAACACTTCTTGTTCATTGCTGAGCATGGCTACCTGTATGAGCACAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS TCA 72 bp TGGTGGGGACAGTGCAAAACCAGACAACCCAGGTCATaGAGTGCAACTGCAGCCAACATGAAGAACAAGAAA +
Preference number: 6 (lower is better)
Translates to: WWGQCKTRQPRS*SATAANMKNKK
Trigger: TTTCTTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCTGGTTTTGCACTGTCCCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1
CDS TCA 72 bp TTATGGATATGGAAACTGAGGCTCACTGGGGTCAAGTaGCGTACCCAGGGCTACTTAAAGAGGCTGTCATGT +
Preference number: 6 (lower is better)
Translates to: LWIWKLRLTGVK*RTQGYLKRLSC
Trigger: ACATGACAGCCTCTTTAAGTAGCCCTGGGTACGTCACTTGACCCCAGTGAGCCTCAGTTTCCATATCCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431541.6
ENST00000674273.1
CDS GCA 72 bp GGGACAGTGCAAAACCAGACAACCCAGGTCATGAAGTaGAACTGCAGCCAACATGAAGAACAAGAAATTGAG +
Preference number: 6 (lower is better)
Translates to: GTVQNQTTQVMK*NCSQHEEQEIE
Trigger: CTCAATTTCTTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCTGGTTTTGCACTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000078527.9
ENST00000374145.6
ENST00000431541.6
ENST00000455364.2
ENST00000674202.1
ENST00000674222.1
ENST00000674273.1
ENST00000674317.1
ENST00000674335.1