RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIGL (Homo sapiens)

Ensembl gene IDs: ENSG00000108474

Ensembl transcript IDs: ENST00000225609.10, ENST00000395844.8, ENST00000414755.1, ENST00000431149.5, ENST00000463810.2, ENST00000470116.2, ENST00000477745.5, ENST00000488375.2, ENST00000489009.1, ENST00000498772.6, ENST00000580201.1, ENST00000581006.5, ENST00000584797.5, ENST00000585034.5, ENST00000596678.2, ENST00000607144.4, ENST00000613719.1

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGCAGGCAGGCACTTGCTGGTAGATACAACCTGCCAGGTACCTTaGGGTGAGTCAGGAAGAGTGTGGCGGCCTCCCCAACCACTGCCT +
Preference number: 1 (lower is better)
Translates to: PAGRHLLVDTTCQVP*GESGRVWRPPQPLP
Trigger: AGGCAGTGGTTGGGGAGGCCGCCACACTCTTCCTGACTCACCTCAAGGTACCTGGCAGGTTGTATCTACCAGCAAGTGCCTGCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR TCA 90 bp TACATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCAGTGCCAGGCCAGGTCCTCTGCACT +
Preference number: 1 (lower is better)
Translates to: YMGSLLQRLLQRGSP*AQVNKPVPGQVLCT
Trigger: AGTGCAGAGGACCTGGCCTGGCACTGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR TCA 90 bp GATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCAGTGCCAGGCCAGGTCCTCTGCACT +
Preference number: 1 (lower is better)
Translates to: DMGSLLQRLLQRGSP*AQVNKPVPGQVLCT
Trigger: AGTGCAGAGGACCTGGCCTGGCACTGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
3UTR GCA 90 bp TACCTTGAGGTGAGTCAGGAAGAGTGTGGCGGCCTCCCCAACCACTaGCTCTGCTCGGCTGAGGGCAGCTCTCTGTGGATTTGCAAATTT +
Preference number: 1 (lower is better)
Translates to: YLEVSQEECGGLPNH*LCSAEGSSLWICKF
Trigger: AAATTTGCAAATCCACAGAGAGCTGCCCTCAGCCGAGCAGAGGCAGTGGTTGGGGAGGCCGCCACACTCTTCCTGACTCACCTCAAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 90 bp GGCTGGCTACCCTCTACCCTGCGGTGTGCCCTACCAGAAAAAGGTTaGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGCCAAAGGAAG +
Preference number: 1 (lower is better)
Translates to: GWLPSTLRCALPEKG*LLEVEIWLPQSQRK
Trigger: CTTCCTTTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAGGGCACACCGCAGGGTAGAGGGTAGCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR TCA 90 bp TACCCTGCGGTGTGCCCTACCAGAAAAAGGTTGGCTGCTAGAGGTTaGGATCTGGCTACCTCAAAGCCAAAGGAAGTAAAGGAGACAGGA +
Preference number: 1 (lower is better)
Translates to: YPAVCPTRKRLAARG*DLATSKPKEVKETG
Trigger: TCCTGTCTCCTTTACTTCCTTTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAGGGCACACCGCAGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR GCA 90 bp CAGGTGGAGTTCCCAACGGAAATGCAGGTACTGAATACAACCAACTaGAACTGTTTCTCTGCTCCTCAATCCTGCTGGCGTAGTACGCGA +
Preference number: 1 (lower is better)
Translates to: QVEFPTEMQVLNTTN*NCFSAPQSCWRSTR
Trigger: TCGCGTACTACGCCAGCAGGATTGAGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGGGAACTCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
3UTR GCA 90 bp CTCAGGCAGATTGGTTCATCAAGCACCCAGCAGTCATTTACAACCTaGCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGAAT +
Preference number: 1 (lower is better)
Translates to: LRQIGSSSTQQSFTT*LIGWGMGLSSDWKN
Trigger: ATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGTGCTTGATGAACCAATCTGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 90 bp GGTTCATCAAGCACCCAGCAGTCATTTACAACCTGCCTAATTGGTTaGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGTA +
Preference number: 1 (lower is better)
Translates to: GSSSTQQSFTTCLIG*GMGLSSDWKNTRGV
Trigger: TACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGTGCTTGATGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 90 bp GATTGGTTCATCAAGCACCCAGCAGTCATTTACAACCTGCCTAATTaGTTGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGG +
Preference number: 1 (lower is better)
Translates to: DWFIKHPAVIYNLPN*LGDGIEFRLEEYQR
Trigger: CCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGTGCTTGATGAACCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR TCA 90 bp CAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTaGATACAACCAACTGCAACTGTTTCTCTGCTCCTCAATCCTGCT +
Preference number: 1 (lower is better)
Translates to: QNNKYRWSSQRKCRY*IQPTATVSLLLNPA
Trigger: AGCAGGATTGAGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
3UTR TCA 90 bp TATTGGGAGTTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTaGCAGACTTGGCAAAGTCCCTTAACCACTCTCAGTCTCAGTTTT +
Preference number: 1 (lower is better)
Translates to: YWEFRDLVPALSVKN*QTWQSPLTTLSLSF
Trigger: AAAACTGAGACTGAGAGTGGTTAAGGGACTTTGCCAAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 90 bp GGAAGTAAAGGAGACAGGAATTACTGTATTGGGAGTTTAGAGACCTaGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTTGGCAAAGTC +
Preference number: 1 (lower is better)
Translates to: GSKGDRNYCIGSLET*FQLCQSRIDRLGKV
Trigger: GACTTTGCCAAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAATACAGTAATTCCTGTCTCCTTTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR TCA 90 bp CAGCAGGAAGGTCTTTTACTATCATTAGAAGTTAACTTTAAGGATTaGGCAGGCACGATACAGCATAGATTGTTTCGTGTGCTATATAGT +
Preference number: 1 (lower is better)
Translates to: QQEGLLLSLEVNFKD*AGTIQHRLFRVLYS
Trigger: ACTATATAGCACACGAAACAATCTATGCTGTATCGTGCCTGCTCAATCCTTAAAGTTAACTTCTAATGATAGTAAAAGACCTTCCTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463810.2
3UTR-3UTR GCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAACATGGGCTCCCTTTTaGAGAGGCTGCTCCAGCGGG +
Preference number: 2 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSTWAPF*RGCSSG
Trigger: CCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATGT...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAGCCCCTGGCCTACATaGGCTCCCTTTTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVSPWPT*APFCRG
Trigger: GCCTCTGCAAAAGGGAGCCCATGTAGGCCAGGGGCT...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAAGCCCCTGGCCTACATaGGCTCCCTTTTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSSPWPT*APFCRG
Trigger: GCCTCTGCAAAAGGGAGCCCATGTAGGCCAGGGGCT...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR GCA 90 bp GTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCCCAGGCCAGGTCCTCTaGACTCCTTTGTCTATTTTC +
Preference number: 2 (lower is better)
Translates to: VIWAPFCRGCSSGDLLELPGQVL*TPLSIF
Trigger: GAAAATAGACAAAGGAGTGCAGAGGACCTGGCCTGG...GAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596678.2
3UTR-3UTR GCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCACCCTTTTGCAGAGGCTaGTCCAGCGGGGATCTCCTT +
Preference number: 2 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSPFCRG*SSGDLL
Trigger: AAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGG...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATACATGGGCTCCCTTTTaGAGAGGCTGCTCCAGCGGG +
Preference number: 2 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHTWAPF*RGCSSG
Trigger: CCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATGT...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR TCA 90 bp TGGTCCAGAGAGGCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAACCTGCCAGGTACCTTaGGGTGAGTCAGGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: WSREAKHGGHAVNGQVGSTCQVP*GESGRV
Trigger: CACTCTTCCTGACTCACCTCAAGGTACCTGGCAGGT...TGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGCCTCTCTGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR TCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCACAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCA +
Preference number: 2 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSQRGSP*AQVNKP
Trigger: TGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTG...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR GCA 90 bp TTGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGTAAAACATCCCCCAACCACTGCCTCTaGTCGGCTGAGGGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LGDGIEFRLEEYQRCKTSPNHCL*SAEGSS
Trigger: AGAGCTGCCCTCAGCCGAGCAGAGGCAGTGGTTGGG...GGATGTTTTACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGCCCAGGGGAAGAAGCTaGAGTTTGGACAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLPRGRS*SLDSPW
Trigger: CCAGGGGCTGTCCAAACTCCAGCTTCTTCCCCTGGG...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CCA 90 bp CCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGTGAGTCAGGAAGAGTGTaGCGGCCTCCCCAACCACTG +
Preference number: 2 (lower is better)
Translates to: PNWLGDGIEFRLEEYQRCESGRV*RPPQPL
Trigger: CAGTGGTTGGGGAGGCCGCCACACTCTTCCTGACTC...ACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CCA 90 bp CTGGCTGGCTACCCTCTACCCTGCGGTGTGCCCTACCAGAAAAAGGTTGGCTGCGTTCCAAAGTCATCATaGCTTGGTAAGCTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: LAGYPLPCGVPYQKKVGCVPKSS*LGKLLS
Trigger: TGAAAGGAGCTTACCAAGCCATGATGACTTTGGAAC...GCAGCCAACCTTTTTCTGGTAGGGCACACCGCAGGGTAGAGGGTAGCCAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR TCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATCAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCA +
Preference number: 2 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHQRGSP*AQVNKP
Trigger: TGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTG...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR TCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCCCAGGTACCTTGAGGTaGGTCAGGAAGAGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGPGTLR*VRKSVA
Trigger: CGCCACACTCTTCCTGACTCACCTCAAGGTACCTGG...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTACCAGGCCAGGTCCTCTaGACTCCTTTGTCTATTTTC +
Preference number: 2 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVPGQVL*TPLSIF
Trigger: GAAAATAGACAAAGGAGTGCAGAGGACCTGGCCTGG...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCGTTGAGGGGCAAACCTaGCCTCCCCACTCATCCAGA +
Preference number: 2 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGVEGQT*PPHSSR
Trigger: TCTGGATGAGTGGGGAGGCCAGGTTTGCCCCTCAAC...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp CTACCAGAAAAAGGTTGGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGCCAAGCCACTTACTCCCCCTaGATCGAAAGTCACCACCAG +
Preference number: 2 (lower is better)
Translates to: LPEKGWLLEVEIWLPQSQATYSP*IESHHQ
Trigger: CTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGC...TTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTAGTTTGGACAGCCCCTaGCCTACATGGGCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTSLDSP*PTWAPF
Trigger: AAAGGGAGCCCATGTAGGCCAGGGGCTGTCCAAACT...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR TCA 90 bp ATTGGGAGTTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTTTGCGCCGGTGAGGTATaGCAGACCAGAAACTGGTCC +
Preference number: 2 (lower is better)
Translates to: IGSLETWFQLCQSRIDRLCAGEV*QTRNWS
Trigger: GGACCAGTTTCTGGTCTGTCATACCTCACCGGCGCA...AAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTACCCTTTTGCAGAGGCTaGTCCAGCGGGGATCTCCTT +
Preference number: 2 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLPFCRG*SSGDLL
Trigger: AAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGG...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR GCA 90 bp AAGTTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTTCTGCTCCTCAATCCTaGTGGCGTAGTACGCGAGCT +
Preference number: 2 (lower is better)
Translates to: KFHRITSTGGVPNGNAGTSAPQS*WRSTRA
Trigger: AGCTCGCGTACTACGCCAGCAGGATTGAGGAGCAGA...AGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
3UTR-3UTR CCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAAGTTTGGACAGCCCCTaGCCTACATGGGCTCCCTTT +
Preference number: 2 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLSLDSP*PTWAPF
Trigger: AAAGGGAGCCCATGTAGGCCAGGGGCTGTCCAAACT...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR CAA 90 bp ACCCAGCAGTCATTTACAACCTGCCTAATTGGTTGGGGGATGGGATaGAGTTCAGACTGGAAGAATACCAGAGGTGTAAAACATCCACCC +
Preference number: 2 (lower is better)
Translates to: TQQSFTTCLIGWGMG*SSDWKNTRGVKHPP
Trigger: GGGTGGATGTTTTACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CAA 90 bp TGGTTCATCAAGCACCCAGCAGTCATTTACAACCTGCCTAATTGGTaGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGT +
Preference number: 2 (lower is better)
Translates to: WFIKHPAVIYNLPNW*GDGIEFRLEEYQRC
Trigger: ACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGTGCTTGATGAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCTACAACCTGCCTAATTaGTTGGGGGATGGGATTGAG +
Preference number: 2 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGYNLPN*LGDGIE
Trigger: CTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTA...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CCA 90 bp CTACCAGAAAAAGGTTGGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGCCAACTAACTCAGGCAGATTaGTTCATCAAGCACCCAGCA +
Preference number: 2 (lower is better)
Translates to: LPEKGWLLEVEIWLPQSQLTQAD*FIKHPA
Trigger: TGCTGGGTGCTTGATGAACCAATCTGCCTGAGTTAG...TTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR TCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTTTTTCACAAGAACTTaGGAAGCTAGCAGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHFFTRT*EASSVA
Trigger: AGCTACACTGCTAGCTTCTCAAGTTCTTGTGAAAAA...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR TCA 90 bp TTGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGTAAAACATCCGCATACAGAGCAATGTaGTTGCTGTGGCCACTTACT +
Preference number: 2 (lower is better)
Translates to: LGDGIEFRLEEYQRCKTSAYRAM*LLWPLT
Trigger: AGTAAGTGGCCACAGCAATCACATTGCTCTGTATGC...GGATGTTTTACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp CATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTGGGTTACAGGGCCCTCACAGCTaGATACAGAGCAATGTGATT +
Preference number: 2 (lower is better)
Translates to: HGGHAVNGQVGSNTLCGLQGPHS*IQSNVI
Trigger: AATCACATTGCTCTGTATGCAGCTGTGAGGGCCCTG...TAACCCACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CCA 90 bp CCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGTAGGGACAGTATCTTGTaGCCCTTTGCAAAAGGAACA +
Preference number: 2 (lower is better)
Translates to: PNWLGDGIEFRLEEYQRCRDSIL*PFAKGT
Trigger: TGTTCCTTTTGCAAAGGGCCACAAGATACTGTCCCT...ACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CCA 90 bp CATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTGGGTTAGAGGGCAGCTCTCTGTaGATTTGCAAATTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: HGGHAVNGQVGSNTLCGLEGSSL*ICKFPP
Trigger: AGGGGGAAATTTGCAAATCCACAGAGAGCTGCCCTC...TAACCCACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CAA 90 bp TTTCCCCCTCATAAGTTTCTCAGAGGGACAGTATCTTGTGGCCCTTaGCAAAAGGAACAAGCCTTACCTTTAGGTAACTTCCCTTCTGAG +
Preference number: 2 (lower is better)
Translates to: FPPHKFLRGTVSCGP*QKEQALPLGNFPSE
Trigger: CTCAGAAGGGAAGTTACCTAAAGGTAAGGCTTGTTCCTTTTGCAAAGGGCCACAAGATACTGTCCCTCTGAGAAACTTATGAGGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR TCA 90 bp CTACCAGAAAAAGGTTGGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGCCAATACGTTTTCATTCATTaGATCTTCGTATTGCGCCGG +
Preference number: 2 (lower is better)
Translates to: LPEKGWLLEVEIWLPQSQYVFIH*IFVLRR
Trigger: CCGGCGCAATACGAAGATTCAATGAATGAAAACGTA...TTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp AATACTTTATGTGGGTTAGGAAGAGTTCCTAACTCAGGCAGATTGGTTCATCAAAACTTCCCTTCTGAGTaGAGGGCCCTCACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: NTLCGLGRVPNSGRLVHQNFPSE*RALTAA
Trigger: TGCAGCTGTGAGGGCCCTGCACTCAGAAGGGAAGTT...TTGATGAACCAATCTGCCTGAGTTAGGAACTCTTCCTAACCCACATAAAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp CTACCAGAAAAAGGTTGGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGCCAAAGCTCTCTGTGGATTTaGAAATTTCCCCCTCATAAG +
Preference number: 2 (lower is better)
Translates to: LPEKGWLLEVEIWLPQSQSSLWI*KFPPHK
Trigger: CTTATGAGGGGGAAATTTGCAAATCCACAGAGAGCT...TTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp CATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTGGGTTACAGTCATTTACAACCTaGCTAATTGGTTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: HGGHAVNGQVGSNTLCGLQSFTT*LIGWGM
Trigger: CATCCCCCAACCAATTAGGCAGGTTGTAAATGACTG...TAACCCACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CAA 90 bp GTCATCCCACATAGAAAGGGCACAAACTACTTACGTTTTCATTCATaGAATCTTCGTATTGCGCCGGTGAGGTATGACAGACCAGAAACT +
Preference number: 2 (lower is better)
Translates to: VIPHRKGTNYLRFHS*NLRIAPVRYDRPET
Trigger: AGTTTCTGGTCTGTCATACCTCACCGGCGCAATACGAAGATTCAATGAATGAAAACGTAAGTAGTTTGTGCCCTTTCTATGTGGGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR GCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACACCAGGCCAGGTCCTCTaGACTCCTTTGTCTATTTTC +
Preference number: 2 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTPGQVL*TPLSIF
Trigger: GAAAATAGACAAAGGAGTGCAGAGGACCTGGCCTGG...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTAGCTATTATTATCCTTaGGGTGGTTTGTTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTSYYYP*GGLFLV
Trigger: AACCAAAAACAAACCACCCCAAGGATAATAATAGCT...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAAGCTATTATTATCCTTaGGGTGGTTTGTTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLSYYYP*GGLFLV
Trigger: AACCAAAAACAAACCACCCCAAGGATAATAATAGCT...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR CAA 90 bp ATAAGAATCAAACAAACTATAGTCATGTTCCAAAGTCATCATGGCTaGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCACAAACT +
Preference number: 2 (lower is better)
Translates to: IRIKQTIVMFQSHHG*VSSFQSSHIERAQT
Trigger: AGTTTGTGCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGGAACATGACTATAGTTTGTTTGATTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR GCA 72 bp CAGGAAGAGTGTGGCGGCCTCCCCAACCACTGCCTCTaGTCGGCTGAGGGCAGCTCTCTGTGGATTTGCAAA +
Preference number: 3 (lower is better)
Translates to: QEECGGLPNHCL*SAEGSSLWICK
Trigger: TTTGCAAATCCACAGAGAGCTGCCCTCAGCCGAGCAGAGGCAGTGGTTGGGGAGGCCGCCACACTCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 72 bp ACCAACTGCAACTGTTTCTCTGCTCCTCAATCCTGCTaGCGTAGTACGCGAGCTGCCGACGTCCCCCAACCC +
Preference number: 3 (lower is better)
Translates to: TNCNCFSAPQSC*RSTRAADVPQP
Trigger: GGGTTGGGGGACGTCGGCAGCTCGCGTACTACGCCAGCAGGATTGAGGAGCAGAGAAACAGTTGCAGTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463810.2
3UTR TCA 72 bp TCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCAGTGCCAGGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: SLLQRLLQRGSP*AQVNKPVPGQV
Trigger: GACCTGGCCTGGCACTGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
3UTR CCA 72 bp CCCTCTACCCTGCGGTGTGCCCTACCAGAAAAAGGTTaGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGC +
Preference number: 3 (lower is better)
Translates to: PSTLRCALPEKG*LLEVEIWLPQS
Trigger: GCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAGGGCACACCGCAGGGTAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CAA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTAGGAAGAAGCTGGAGTTaGGACAGCCCCTGGCCTACA +
Preference number: 3 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLGRSWS*DSPWPT
Trigger: TGTAGGCCAGGGGCTGTCCAAACTCCAGCTTCTTCC...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR GCA 72 bp TGCCTCTGCTCGGCTGAGGGCAGCTCTCTGTGGATTTaGAAATTTCCCCCTCATAAGTTTCTCAGAGGGACA +
Preference number: 3 (lower is better)
Translates to: CLCSAEGSSLWI*KFPPHKFLRGT
Trigger: TGTCCCTCTGAGAAACTTATGAGGGGGAAATTTGCAAATCCACAGAGAGCTGCCCTCAGCCGAGCAGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CAA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAATTTCCCCTTTGTTCCTaGGATCTGAAAACCCTTCAA +
Preference number: 3 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKFPLCS*DLKTLQ
Trigger: TTGAAGGGTTTTCAGATCCAAGGAACAAAGGGGAAA...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000225609.10
3UTR GCA 72 bp CAGAGCAATGTGATTGCTGTGGCCACTTACTCCCCCTaGATCGAAAGTCACCACCAGATTGATGCCATTCAC +
Preference number: 3 (lower is better)
Translates to: QSNVIAVATYSP*IESHHQIDAIH
Trigger: GTGAATGGCATCAATCTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CAA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGAAGAAGCTGGAGTTaGGACAGCCCCTGGCCTACA +
Preference number: 3 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLGRSWS*DSPWPT
Trigger: TGTAGGCCAGGGGCTGTCCAAACTCCAGCTTCTTCC...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CAA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCAAAAAGCTAGACAGGTaGAGGGGCAAACCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGKKLDR*RGKPGL
Trigger: GAGGCCAGGTTTGCCCCTCAACCTGTCTAGCTTTTT...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 72 bp GCCGAGATCGCACCGTTGCACTCCAACCCAATAGATTaGGCCTCCTTGGAAATAGATACTAGTCCACTTCAA +
Preference number: 3 (lower is better)
Translates to: AEIAPLHSNPID*ASLEIDTSPLQ
Trigger: TTGAAGTGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGATCTCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
3UTR GCA 72 bp TTCCCAACGGAAATGCAGGTACTGAATACAACCAACTaGAACTGTTTCTCTGCTCCTCAATCCTGCTGGCGT +
Preference number: 3 (lower is better)
Translates to: FPTEMQVLNTTN*NCFSAPQSCWR
Trigger: ACGCCAGCAGGATTGAGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
3UTR CCA 72 bp AGCACCCAGCAGTCATTTACAACCTGCCTAATTGGTTaGGGGATGGGATTGAGTTCAGACTGGAAGAATACC +
Preference number: 3 (lower is better)
Translates to: STQQSFTTCLIG*GMGLSSDWKNT
Trigger: GGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CAA 90 bp GGGCACAAACTACTTACGTTTTCATTCATTGAATCTTCGTATTGCGCCGGTGAGAACCTGCCTAATTGGTaGGGGGATGGGATTGAGTTC +
Preference number: 3 (lower is better)
Translates to: GHKLLTFSFIESSYCAGENLPNW*GDGIEF
Trigger: GAACTCAATCCCATCCCCCAACCAATTAGGCAGGTT...CTCACCGGCGCAATACGAAGATTCAATGAATGAAAACGTAAGTAGTTTGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR TCA 72 bp AAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTaGATACAACCAACTGCAACTGTTTCTCTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: KYRWSSQRKCRY*IQPTATVSLLL
Trigger: GAGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
3UTR TCA 72 bp TCATTCATTGAATCTTCGTATTGCGCCGGTGAGGTATaGCAGACCAGAAACTGGTCCAGAGAGGCTAAGCAT +
Preference number: 3 (lower is better)
Translates to: SFIESSYCAGEV*QTRNWSREAKH
Trigger: ATGCTTAGCCTCTCTGGACCAGTTTCTGGTCTGTCATACCTCACCGGCGCAATACGAAGATTCAATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR GCA 72 bp ATTGGTTCATCAAGCACCCAGCAGTCATTTACAACCTaGCTAATTGGTTGGGGGATGGGATTGAGTTCAGAC +
Preference number: 3 (lower is better)
Translates to: IGSSSTQQSFTT*LIGWGMGLSSD
Trigger: GTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGTGCTTGATGAACCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 72 bp TGCCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTaGAAGAATACCAGAGGTGTAAAACATCCACCCTGT +
Preference number: 3 (lower is better)
Translates to: CLIGWGMGLSSD*KNTRGVKHPPC
Trigger: ACAGGGTGGATGTTTTACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 72 bp ATCAAGCACCCAGCAGTCATTTACAACCTGCCTAATTaGTTGGGGGATGGGATTGAGTTCAGACTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: IKHPAVIYNLPN*LGDGIEFRLEE
Trigger: TTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGACTGCTGGGTGCTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR-3UTR CAA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTATCCTTGGGGTGGTTaGTTTTTGGTTCTTTGGGTT +
Preference number: 3 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLYPWGG*FLVLWV
Trigger: AACCCAAAGAACCAAAAACAAACCACCCCAAGGATA...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR-3UTR CAA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTTATCCTTGGGGTGGTTaGTTTTTGGTTCTTTGGGTT +
Preference number: 3 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTYPWGG*FLVLWV
Trigger: AACCCAAAGAACCAAAAACAAACCACCCCAAGGATA...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
3UTR TCA 72 bp TTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTaGCAGACTTGGCAAAGTCCCTTAACCACTCTCAGT +
Preference number: 3 (lower is better)
Translates to: FRDLVPALSVKN*QTWQSPLTTLS
Trigger: ACTGAGAGTGGTTAAGGGACTTTGCCAAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CCA 72 bp GGAGACAGGAATTACTGTATTGGGAGTTTAGAGACCTaGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTT +
Preference number: 3 (lower is better)
Translates to: GDRNYCIGSLET*FQLCQSRIDRL
Trigger: AAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAATACAGTAATTCCTGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp GGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGGATGCAGGTGGCGTCGGCTGGCTCTCATaGCTGGGCCGCTCAGGCATA +
Preference number: 4 (lower is better)
Translates to: GVGWLSWLGRSGIEDAGGVGWLS*LGRSGI
Trigger: TATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGAC...GCCACCTGCATCCTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR TCA 90 bp GGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGCGTCAGGGTGCGCTATaGCCAGCAGGGTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: GIICGVGWLSWLGRSGIERQGAL*PAGSGF
Trigger: AAAGCCGGACCCTGCTGGTCATAGCGCACCCTGACG...CTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp CTGAAAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGCCAGAGGAAGCCCCATaGCAAGACCGCCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: LKGASSVGSAGSHGWAAQPEEAP*QDRQRH
Trigger: GTGGCGTTGGCGGTCTTGGCATGGGGCTTCCTCTGG...CTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp GCTGAAAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCACCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGT +
Preference number: 4 (lower is better)
Translates to: AERGIICGVGWLSWLGRSPSRPP*SRLFIR
Trigger: ACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGG...TGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTTTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp AAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: KGHHLWGRLALMAGPLRHSRYTQ*LRRAKP
Trigger: AGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCT...ATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp GGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGGATGCAGGTGGCTGAGGACTCTGGCCACGTaGTCTGTGTCCCACTGCATG +
Preference number: 4 (lower is better)
Translates to: GRLALMAGPLRHRGCRWLRTLAT*SVSHCM
Trigger: CATGCAGTGGGACACAGAGCACGTGGCCAGAGTCCT...CAGCCACCTGCATCCTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR CCA 90 bp GGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGCTGAAGGAGGACTCTaGCCACGTGCTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GHHLWGRLALMAGPLRHRAEGGL*PRALCP
Trigger: GGGACACAGAGCACGTGGCCAGAGTCCTCCTTCAGC...TCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp AGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATATGCTCTGTGTCCCACTaGATGCCTGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: RGIICGVGWLSWLGRSGICSVSH*MPGSSG
Trigger: CCCAGATGACCCAGGCATGCAGTGGGACACAGAGCA...TATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAACGTCAGGGTGCGCTATaGCCAGCAGGGTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKRQGAL*PAGSGF
Trigger: AAAGCCGGACCCTGCTGGTCATAGCGCACCCTGACG...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp GAAAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCTTCACTTCTATGTGCTaGAGGAGGACTCTGGCCACG +
Preference number: 4 (lower is better)
Translates to: ERGIICGVGWLSWLGRSGFTSMC*RRTLAT
Trigger: CGTGGCCAGAGTCCTCCTTCAGCACATAGAAGTGAA...GCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR CCA 90 bp AAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATGTCCCACTGCATGCCTaGGTCATCTGGGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: KGHHLWGRLALMAGPLRHVPLHA*VIWEIP
Trigger: AGGGATTTCCCAGATGACCCAGGCATGCAGTGGGAC...ATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR CCA 90 bp ATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGGATGCAAAGGGGCATCATCTGTaGGGTCGGCTGGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: ICGVGWLSWLGRSGIEDAKGHHL*GRLALM
Trigger: CATGAGAGCCAGCCGACCCCACAGATGATGCCCCTT...TGCATCCTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp ATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGGATGCTTCATCGTCAGGGTaGGCTATGACCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IICGVGWLSWLGRSGIEDASSSG*AMTSRV
Trigger: GACCCTGCTGGTCATAGCGCACCCTGACGATGAAGC...ATCCTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp ACTGTTTCTCTGCTCCTCAATCCTGCTGGCGTAGTACGCGAGCTGCCGACGTCCAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: TVSLLLNPAGVVRELPTSSRYTQ*LRRAKP
Trigger: AGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCT...GGACGTCGGCAGCTCGCGTACTACGCCAGCAGGATTGAGGAGCAGAGAAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR GCA 90 bp GTGCTGAAAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCTGTGTCCCACTGCATaGCTGGGTCATCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: VLKGASSVGSAGSHGWAALCPTA*LGHLGN
Trigger: ATTTCCCAGATGACCCAGGCATGCAGTGGGACACAG...AGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTTTCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR CCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAACCCAGGGGAAGAAGCTaGAGTTTGGACAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKPRGRS*SLDSPW
Trigger: CCAGGGGCTGTCCAAACTCCAGCTTCTTCCCCTGGG...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp CTGAAAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGACTCTTCATTCGTTCTaGGGAGTCCCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LKGASSVGSAGSHGWAAQTLHSF*GVPNPE
Trigger: CTCTGGGTTTGGGACTCCTCAGAACGAATGAAGAGT...CTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAAAGGACTCTGGCCACGTaGTCTGTGTCCCACTGCATG +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKRTLAT*SVSHCM
Trigger: CATGCAGTGGGACACAGAGCACGTGGCCAGAGTCCT...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp GTGCTGAAAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTGAGGATGCAGGTGGCTaGTCACAATCTGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: VLKGASSVGSAGSHGWAAEDAGG*SQSGIC
Trigger: GCAAATTCCAGATTGTGAGCAGCCACCTGCATCCTC...AGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTTTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAATCACAGACTGAAGCGTaGGCACAGAGCACCCTCACA +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKSQTEA*AQSTLT
Trigger: TGTGAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGA...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395844.8
ENST00000596678.2
CDS-3UTR TCA 90 bp GCAGTGAGCCGAGATCGCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTACTGGCGTGTGCTGTTaGGGTCCCTGTGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: AVSRDRTVALQPNRLGLLTGVCC*GPCASD
Trigger: ATCAGAGGCACAGGGACCTCAACAGCACACGCCAGT...AAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGATCTCGGCTCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR CCA 90 bp CATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGGATGCCATAGAGGATGCAGGTaGCTGCTCACAATCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HLWGRLALMAGPLRHRGCHRGCR*LLTIWN
Trigger: ATTCCAGATTGTGAGCAGCCACCTGCATCCTCTATG...GCATCCTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAAAGCACATTCACAGACTaGAGCGTGAGCACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKSTFTD*SVSTEH
Trigger: GTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCT...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAAAGGACATCCTGCGTATaGAGCAGAGACAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKRTSCV*SRDKGR
Trigger: TCTGCCCTTGTCTCTGCTTCATACGCAGGATGTCCT...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR TCA 90 bp GTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCCAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: VIWAPFCRGCSSGDLLELQRGSP*AQVNKP
Trigger: TGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTG...GAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR GCA 90 bp ACTGTTTCTCTGCTCCTCAATCCTGCTGGCGTAGTACGCGAGCTGCCGACGTCCCTGCAACTGTTTCTCTaGTCCTCAATCCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TVSLLLNPAGVVRELPTSLQLFL*SSILLA
Trigger: CGCCAGCAGGATTGAGGAGCAGAGAAACAGTTGCAG...GGACGTCGGCAGCTCGCGTACTACGCCAGCAGGATTGAGGAGCAGAGAAACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR GCA 90 bp CCTCAATCCTGCTGGCGTAGTACGCGAGCTGCCGACGTCCCCCAACCCACCAGGGTTACTAGCACAAGCTaGATTTTAAAGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PQSCWRSTRAADVPQPTRVTSTS*ILKAAG
Trigger: TCCTGCTGCCTTTAAAATGCAGCTTGTGCTAGTAAC...CCTGGTGGGTTGGGGGACGTCGGCAGCTCGCGTACTACGCCAGCAGGATTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR CCA 90 bp CCTCAATCCTGCTGGCGTAGTACGCGAGCTGCCGACGTCCCCCAACCCACCAGGTCCTTCACTGAAAGCTaGGTGGAGTTGAACTCTAAA +
Preference number: 4 (lower is better)
Translates to: PQSCWRSTRAADVPQPTRSFTES*VELNSK
Trigger: TTTAGAGTTCAACTCCACCCAGCTTTCAGTGAAGGA...CCTGGTGGGTTGGGGGACGTCGGCAGCTCGCGTACTACGCCAGCAGGATTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR TCA 90 bp GAGATCGCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATCGTCAGGGTGCGCTATaGCCAGCAGGGTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: EIAPLHSNPIDWASLEIDRQGAL*PAGSGF
Trigger: AAAGCCGGACCCTGCTGGTCATAGCGCACCCTGACG...ATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAACCACTTCTTTGCTGTTaGGCACGAAGAGGACATCCT +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKPLLCC*ARRGHP
Trigger: AGGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGG...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR TCA 90 bp GTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCCCACTTCTTTGCTGTTaGGCACGAAGAGGACATCCT +
Preference number: 4 (lower is better)
Translates to: VIWAPFCRGCSSGDLLELPLLCC*ARRGHP
Trigger: AGGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGG...GAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAAGGAAGCTCAGTGAGTTaGTTCTCATGTACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKGSSVS*FSCTGR
Trigger: TCTCCCGGTACATGAGAATCAACTCACTGAGCTTCC...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR GCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAGCTTCATCGTCAGGGTaGGCTATGACCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVASSSG*AMTSRV
Trigger: GACCCTGCTGGTCATAGCGCACCCTGACGATGAAGC...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHSRYTQ*LRRAKP
Trigger: AGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCT...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATGCTCTGTGTCCCACTaGATGCCTGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSCSVSH*MPGSSG
Trigger: CCCAGATGACCCAGGCATGCAGTGGGACACAGAGCA...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAACCAGGCCAGGTCCTCTaGACTCCTTTGTCTATTTTC +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKPGQVL*TPLSIF
Trigger: GAAAATAGACAAAGGAGTGCAGAGGACCTGGCCTGG...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR GCA 90 bp GTACGCGAGCTGCCGACGTCCCCCAACCCACCAGGTAAGCCGGCCGCTCCTGTCAGGTATACTTTGACATaGCATAAAATTCACCCATTG +
Preference number: 4 (lower is better)
Translates to: VRELPTSPNPPGKPAAPVRYTLT*HKIHPL
Trigger: CAATGGGTGAATTTTATGGCATGTCAAAGTATACCT...GACAGGAGCGGCCGGCTTACCTGGTGGGTTGGGGGACGTCGGCAGCTCGCGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR CCA 90 bp GGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGCATTACACTGGAGAGTaGAATCCCCAAAACATCACA +
Preference number: 4 (lower is better)
Translates to: GIICGVGWLSWLGRSGIEHYTGE*NPQNIT
Trigger: TGTGATGTTTTGGGGATTCCACTCTCCAGTGTAATG...CTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR CCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTAGCTGAAGGAGGACTCTaGCCACGTGCTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLAEGGL*PRALCP
Trigger: GGGACACAGAGCACGTGGCCAGAGTCCTCCTTCAGC...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAAAGGACATGGCTTTCTTaGCCTGTGCCACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKRTWLS*PVPLLC
Trigger: GCAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCT...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR CCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAGACCTGCCCAGGCACTaGGCTAGGTGTTCCACATCT +
Preference number: 4 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSDLPRH*ARCSTS
Trigger: AGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTC...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp AAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATTGGCTGCTCACAATCTaGAATTTGCTCTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KGHHLWGRLALMAGPLRHWLLTI*NLLCLS
Trigger: TGAAAGACAGAGCAAATTCCAGATTGTGAGCAGCCA...ATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR TCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCCGTCAGGGTGCGCTATaGCCAGCAGGGTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGRQGAL*PAGSGF
Trigger: AAAGCCGGACCCTGCTGGTCATAGCGCACCCTGACG...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAAGCATACAGAGCAATGTaGTTGCTGTGGCCACTTACT +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKAYRAM*LLWPLT
Trigger: AGTAAGTGGCCACAGCAATCACATTGCTCTGTATGC...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAATCAGAGGAAGCTCAGTaGGTTGATTCTCATGTACCG +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKSEEAQ*VDSHVP
Trigger: CGGTACATGAGAATCAACTCACTGAGCTTCCTCTGA...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR TCA 90 bp AAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATCTCTGTCTTTCAGATTaGTGCCATTCACTTCTATGT +
Preference number: 4 (lower is better)
Translates to: KGHHLWGRLALMAGPLRHLCLSD*CHSLLC
Trigger: ACATAGAAGTGAATGGCATCAATCTGAAAGACAGAG...ATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATGCTTCATCGTCAGGGTaGGCTATGACCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHASSSG*AMTSRV
Trigger: GACCCTGCTGGTCATAGCGCACCCTGACGATGAAGC...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTGCTCTGTGTCCCACTaGATGCCTGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHCSVSH*MPGSSG
Trigger: CCCAGATGACCCAGGCATGCAGTGGGACACAGAGCA...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATAGGACTCTGGCCACGTaGTCTGTGTCCCACTGCATG +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHRTLAT*SVSHCM
Trigger: CATGCAGTGGGACACAGAGCACGTGGCCAGAGTCCT...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAGCCACTTACTCCCCCTaGATCGAAAGTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVATYSP*IESHHQ
Trigger: CTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGC...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp GTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCGAGCACCCTCACAGCTaGATACAGAGCAATGTGATT +
Preference number: 4 (lower is better)
Translates to: VIWAPFCRGCSSGDLLELEHPHS*IQSNVI
Trigger: AATCACATTGCTCTGTATGCAGCTGTGAGGGTGCTC...GAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR GCA 90 bp ACTGTTTCTCTGCTCCTCAATCCTGCTGGCGTAGTACGCGAGCTGCCGACGTCCCTCCCTACGGAAAACTaGAGAGAAGCAAAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TVSLLLNPAGVVRELPTSLPTEN*REAKQV
Trigger: TACCTGCTTTGCTTCTCTGCAGTTTTCCGTAGGGAG...GGACGTCGGCAGCTCGCGTACTACGCCAGCAGGATTGAGGAGCAGAGAAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR GCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCCCCAACCACTGCCTCTaGTCGGCTGAGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGPNHCL*SAEGSS
Trigger: AGAGCTGCCCTCAGCCGAGCAGAGGCAGTGGTTGGG...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp TCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCATATGGGCTCCCTTTTaGAGAGGCTGCTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLPNFCVIWAPFCRGCSSIWAPF*RGCSSG
Trigger: CCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATAT...GCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAGTCCCACTGCATGCCTaGGTCATCTGGGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVVPLHA*VIWEIP
Trigger: AGGGATTTCCCAGATGACCCAGGCATGCAGTGGGAC...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTGCGGTGGCAGGACATaGCTTTCTTGGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHCGGRT*LSWPVP
Trigger: TGGCACAGGCCAAGAAAGCCATGTCCTGCCACCGCA...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTAGACCTGCCCAGGCACTaGGCTAGGTGTTCCACATCT +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLDLPRH*ARCSTS
Trigger: AGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTC...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTATTCACTTCTATGTGCTaGAGGAGGACTCTGGCCACG +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVFTSMC*RRTLAT
Trigger: CGTGGCCAGAGTCCTCCTTCAGCACATAGAAGTGAA...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAAGGACATCCTGCGTATaGAGCAGAGACAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSRTSCV*SRDKGR
Trigger: TCTGCCCTTGTCTCTGCTTCATACGCAGGATGTCCT...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATCACAGACTGAAGCGTaGGCACAGAGCACCCTCACA +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLSQTEA*AQSTLT
Trigger: TGTGAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGA...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395844.8
CDS-3UTR TCA 90 bp TCGGCTGAGGGCAGCTCTCTGTGGATTTGCAAATTTCCCCCTCATAAGTTTCTCCCAGGTACCTTGAGGTaGGTCAGGAAGAGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SAEGSSLWICKFPPHKFLPGTLR*VRKSVA
Trigger: CGCCACACTCTTCCTGACTCACCTCAAGGTACCTGG...GAGAAACTTATGAGGGGGAAATTTGCAAATCCACAGAGAGCTGCCCTCAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp AATGTGATTGCTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCACCAGATTTGCGCCGGTGAGGTATaGCAGACCAGAAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: NVIAVATYSPCIESHHQICAGEV*QTRNWS
Trigger: GGACCAGTTTCTGGTCTGTCATACCTCACCGGCGCA...AATCTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGCCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGT +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLPSRPP*SRLFIR
Trigger: ACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGG...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATCGCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTCCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGT +
Preference number: 4 (lower is better)
Translates to: IAPLHSNPIDWASLEIDTPSRPP*SRLFIR
Trigger: ACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGG...AGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR GCA 90 bp GAAAGGGGCATCATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCAAAACATCACAGCTCTaGAAAAGTTCTTTCTTACGA +
Preference number: 4 (lower is better)
Translates to: ERGIICGVGWLSWLGRSGKTSQL*KSSFLR
Trigger: TCGTAAGAAAGAACTTTTGCAGAGCTGTGATGTTTT...GCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATGATGCCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS-3UTR GCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTAGCCACTTACTCCCCCTaGATCGAAAGTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLATYSP*IESHHQ
Trigger: CTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGC...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATAACTTCCCTTCTGAGTaGAGGGCCCTCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHNFPSE*RALTAA
Trigger: TGCAGCTGTGAGGGCCCTGCACTCAGAAGGGAAGTT...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225609.10
CDS-3UTR GCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGACCAGAGGAGCTGGCTaGGGTGGCAGGACATGGCTT +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLTRGAG*GGRTWL
Trigger: AAGCCATGTCCTGCCACCGCAGCCAGCTCCTCTGGT...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTACCAGAGGAGCTGGCTaGGGTGGCAGGACATGGCTT +
Preference number: 4 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTTRGAG*GGRTWL
Trigger: AAGCCATGTCCTGCCACCGCAGCCAGCTCCTCTGGT...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGACCAGAGGAGCTGGCTaGGGTGGCAGGACATGGCTT +
Preference number: 4 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLTRGAG*GGRTWL
Trigger: AAGCCATGTCCTGCCACCGCAGCCAGCTCCTCTGGT...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR GCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGACATGGGCTCCCTTTTaGAGAGGCTGCTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLTWAPF*RGCSSG
Trigger: CCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATGT...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTACATGGGCTCCCTTTTaGAGAGGCTGCTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTTWAPF*RGCSSG
Trigger: CCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATGT...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAATGATAATAGGGACCTaGCCAGGCACTGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSMIIGT*PGTGLG
Trigger: ACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCAT...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGGCTGAAGGAGGACTCTaGCCACGTGCTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLAEGGL*PRALCP
Trigger: GGGACACAGAGCACGTGGCCAGAGTCCTCCTTCAGC...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATAGTTTGGACAGCCCCTaGCCTACATGGGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHSLDSP*PTWAPF
Trigger: AAAGGGAGCCCATGTAGGCCAGGGGCTGTCCAAACT...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAACTCTTCATTCGTTCTaGGGAGTCCCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSTLHSF*GVPNPE
Trigger: CTCTGGGTTTGGGACTCCTCAGAACGAATGAAGAGT...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTACGTCAGGGTGCGCTATaGCCAGCAGGGTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLRQGAL*PAGSGF
Trigger: AAAGCCGGACCCTGCTGGTCATAGCGCACCCTGACG...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp TTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTGAACGTCAGGGTGCGCTATaGCCAGCAGGGTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: FHRITSTGGVPNGNAGTERQGAL*PAGSGF
Trigger: AAAGCCGGACCCTGCTGGTCATAGCGCACCCTGACG...TTCAGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAATTTGTTCCTTGGATCTaGAAACCCTTCAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKFVPWI*KPFKAS
Trigger: TGAAGCCTTGAAGGGTTTTCAGATCCAAGGAACAAA...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS-3UTR TCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTACAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLQRGSP*AQVNKP
Trigger: TGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTG...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAACCTCTGCCCAGATTTTaGTGTAGTCTAATTGACATC +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKPLPRF*CSLIDI
Trigger: GATGTCAATTAGACTACATCAAAATCTGGGCAGAGG...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR GCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTACCAGAGGAAGCCCCATaGCAAGACCGCCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLPEEAP*QDRQRH
Trigger: GTGGCGTTGGCGGTCTTGGCATGGGGCTTCCTCTGG...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp TTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTGAACCAGAGGAAGCCCCATaGCAAGACCGCCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: FHRITSTGGVPNGNAGTEPEEAP*QDRQRH
Trigger: GTGGCGTTGGCGGTCTTGGCATGGGGCTTCCTCTGG...TTCAGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR GCA 90 bp CACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAGTCCACTTCAACCAGAGGAAGCCCCATaGCAAGACCGCCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: HSNPIDWASLEIDTSPLQPEEAP*QDRQRH
Trigger: GTGGCGTTGGCGGTCTTGGCATGGGGCTTCCTCTGG...TTGAAGTGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR GCA 90 bp ATTGGGAGTTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTTCCAGAGGAAGCCCCATaGCAAGACCGCCAACGCCAC +
Preference number: 4 (lower is better)
Translates to: IGSLETWFQLCQSRIDRLPEEAP*QDRQRH
Trigger: GTGGCGTTGGCGGTCTTGGCATGGGGCTTCCTCTGG...AAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp CCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAGTCCAGCTTCATCGTCAGGGTaGGCTATGACCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PLHSNPIDWASLEIDTSPASSSG*AMTSRV
Trigger: GACCCTGCTGGTCATAGCGCACCCTGACGATGAAGC...TGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR GCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCGCTTCATCGTCAGGGTaGGCTATGACCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGASSSG*AMTSRV
Trigger: GACCCTGCTGGTCATAGCGCACCCTGACGATGAAGC...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp TCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAGTCCACTTCAAGCCAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SNPIDWASLEIDTSPLQASRYTQ*LRRAKP
Trigger: AGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCT...GGCTTGAAGTGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR GCA 90 bp CCCCCTCATAAGTTTCTCAGAGGGACAGTATCTTGTGGCCCTTTGCAAAAGGAATGCTCTGTGTCCCACTaGATGCCTGGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: PPHKFLRGTVSCGPLQKECSVSH*MPGSSG
Trigger: CCCAGATGACCCAGGCATGCAGTGGGACACAGAGCA...TTCCTTTTGCAAAGGGCCACAAGATACTGTCCCTCTGAGAAACTTATGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp TGGTCCAGAGAGGCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCACAGGGCCCTCACAGCTaGATACAGAGCAATGTGATT +
Preference number: 4 (lower is better)
Translates to: WSREAKHGGHAVNGQVGSQGPHS*IQSNVI
Trigger: AATCACATTGCTCTGTATGCAGCTGTGAGGGCCCTG...TGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGCCTCTCTGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAGGCTTTCTTGGCCTGTaGCACTTCTTTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVGFLGL*HFFAVE
Trigger: CTCAACAGCAAAGAAGTGGCACAGGCCAAGAAAGCC...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGCCCTTTTGCAGAGGCTaGTCCAGCGGGGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLPFCRG*SSGDLL
Trigger: AAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGG...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGCCCTTTTGCAGAGGCTaGTCCAGCGGGGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLPFCRG*SSGDLL
Trigger: AAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGG...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR GCA 90 bp ACAGAGCAATGTGATTGCTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCACTCTACCCTGCGGTGTaGCCTACCAGAAAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: TEQCDCCGHLLPLHRKSPLYPAV*PTRKRL
Trigger: CAACCTTTTTCTGGTAGGGCACACCGCAGGGTAGAG...TGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGTGCGGTGGCAGGACATaGCTTTCTTGGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLCGGRT*LSWPVP
Trigger: TGGCACAGGCCAAGAAAGCCATGTCCTGCCACCGCA...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CCA 90 bp CCAACGGAAATGCAGGTACTGAATACAACCAACTGCAACTGTTTCTCTGCTCCTGCTCCTCAATCCTGCTaGCGTAGTACGCGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTEMQVLNTTNCNCFSAPAPQSC*RSTRAA
Trigger: GGCAGCTCGCGTACTACGCCAGCAGGATTGAGGAGC...AGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR CCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCCATAGAAGACCTGGCTaGCTACCCTCTACCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGHRRPG*LPSTLR
Trigger: CCGCAGGGTAGAGGGTAGCCAGCCAGGTCTTCTATG...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp TCATTTACAACCTGCCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGGAGTCAGGAAGAGTGTaGCGGCCTCCCCAACCACTG +
Preference number: 4 (lower is better)
Translates to: SFTTCLIGWGMGLSSDWKESGRV*RPPQPL
Trigger: CAGTGGTTGGGGAGGCCGCCACACTCTTCCTGACTC...CTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATCAGAGGAAGCTCAGTaGGTTGATTCTCATGTACCG +
Preference number: 4 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSSEEAQ*VDSHVP
Trigger: CGGTACATGAGAATCAACTCACTGAGCTTCCTCTGA...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp TTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTGAACCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGT +
Preference number: 4 (lower is better)
Translates to: FHRITSTGGVPNGNAGTEPSRPP*SRLFIR
Trigger: ACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGG...TTCAGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR GCA 90 bp GGGCACAAACTACTTACGTTTTCATTCATTGAATCTTCGTATTGCGCCGGTGAGCCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGT +
Preference number: 4 (lower is better)
Translates to: GHKLLTFSFIESSYCAGEPSRPP*SRLFIR
Trigger: ACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGG...CTCACCGGCGCAATACGAAGATTCAATGAATGAAAACGTAAGTAGTTTGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp ATTGGGAGTTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTTAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: IGSLETWFQLCQSRIDRLSRYTQ*LRRAKP
Trigger: AGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCT...AAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp CCCCCTCATAAGTTTCTCAGAGGGACAGTATCTTGTGGCCCTTTGCAAAAGGAAGCCACTTACTCCCCCTaGATCGAAAGTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: PPHKFLRGTVSCGPLQKEATYSP*IESHHQ
Trigger: CTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGC...TTCCTTTTGCAAAGGGCCACAAGATACTGTCCCTCTGAGAAACTTATGAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp TCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGCTTTCTTGGCCTGTaGCACTTCTTTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SLPNFCVIWAPFCRGCSSGFLGL*HFFAVE
Trigger: CTCAACAGCAAAGAAGTGGCACAGGCCAAGAAAGCC...GCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTCCCACTGCATGCCTaGGTCATCTGGGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTVPLHA*VIWEIP
Trigger: AGGGATTTCCCAGATGACCCAGGCATGCAGTGGGAC...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp TCATTTACAACCTGCCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGGTTGAGGGGCAAACCTaGCCTCCCCACTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: SFTTCLIGWGMGLSSDWKVEGQT*PPHSSR
Trigger: TCTGGATGAGTGGGGAGGCCAGGTTTGCCCCTCAAC...CTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTAGCATACAGAGCAATGTaGTTGCTGTGGCCACTTACT +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLAYRAM*LLWPLT
Trigger: AGTAAGTGGCCACAGCAATCACATTGCTCTGTATGC...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATGCATACAGAGCAATGTaGTTGCTGTGGCCACTTACT +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHAYRAM*LLWPLT
Trigger: AGTAAGTGGCCACAGCAATCACATTGCTCTGTATGC...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGAGCACATTCACAGACTaGAGCGTGAGCACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLSTFTD*SVSTEH
Trigger: GTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCT...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGAGGACATCCTGCGTATaGAGCAGAGACAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLRTSCV*SRDKGR
Trigger: TCTGCCCTTGTCTCTGCTTCATACGCAGGATGTCCT...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR TCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATCAGAGGAAGCTCAGTaGGTTGATTCTCATGTACCG +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLSEEAQ*VDSHVP
Trigger: CGGTACATGAGAATCAACTCACTGAGCTTCCTCTGA...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp AAGTTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTGCTTCATCGTCAGGGTaGGCTATGACCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KFHRITSTGGVPNGNAGTASSSG*AMTSRV
Trigger: GACCCTGCTGGTCATAGCGCACCCTGACGATGAAGC...AGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR GCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTCTGTGTCCCACTGCATaGCTGGGTCATCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTLCPTA*LGHLGN
Trigger: ATTTCCCAGATGACCCAGGCATGCAGTGGGACACAG...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGCTGTGTCCCACTGCATaGCTGGGTCATCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLLCPTA*LGHLGN
Trigger: ATTTCCCAGATGACCCAGGCATGCAGTGGGACACAG...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp TCATTTACAACCTGCCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGAACTTCCCTTCTGAGTaGAGGGCCCTCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SFTTCLIGWGMGLSSDWKNFPSE*RALTAA
Trigger: TGCAGCTGTGAGGGCCCTGCACTCAGAAGGGAAGTT...CTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATGAGCACCCTCACAGCTaGATACAGAGCAATGTGATT +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHEHPHS*IQSNVI
Trigger: AATCACATTGCTCTGTATGCAGCTGTGAGGGTGCTC...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395844.8
CDS-3UTR GCA 90 bp CATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTGGGTTAGGCTACCCTCTACCCTaGGGTGTGCCCTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: HGGHAVNGQVGSNTLCGLGYPLP*GVPYQK
Trigger: TTTCTGGTAGGGCACACCGCAGGGTAGAGGGTAGCC...TAACCCACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATCATGCCTGGGTCATCTaGGAAATCCCTGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHHAWVI*EIPVVN
Trigger: ATTGACAACAGGGATTTCCCAGATGACCCAGGCATG...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp ACAGAGCAATGTGATTGCTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCATACAACCTGCCTAATTaGTTGGGGGATGGGATTGAG +
Preference number: 4 (lower is better)
Translates to: TEQCDCCGHLLPLHRKSPYNLPN*LGDGIE
Trigger: CTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTA...TGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTACTCTTCATTCGTTCTaGGGAGTCCCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTTLHSF*GVPNPE
Trigger: CTCTGGGTTTGGGACTCCTCAGAACGAATGAAGAGT...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp TTGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGTAAAACATCCTTCACTTCTATGTGCTaGAGGAGGACTCTGGCCACG +
Preference number: 4 (lower is better)
Translates to: LGDGIEFRLEEYQRCKTSFTSMC*RRTLAT
Trigger: CGTGGCCAGAGTCCTCCTTCAGCACATAGAAGTGAA...GGATGTTTTACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCTTGGCTGCTAGAGGTTaGGATCTGGCTACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGLAARG*DLATSK
Trigger: CTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAA...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp GCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTACCTGCCAGGTACCTTaGGGTGAGTCAGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: AKHGGHAVNGQVGSNTLCTCQVP*GESGRV
Trigger: CACTCTTCCTGACTCACCTCAAGGTACCTGGCAGGT...ACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp CTACCAGAAAAAGGTTGGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGCCAATTCGTATTGCGCCGGTaGGGTATGACAGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPEKGWLLEVEIWLPQSQFVLRR*GMTDQK
Trigger: TTTCTGGTCTGTCATACCTCACCGGCGCAATACGAA...TTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAAAAAACATCACAGCTCTaGAAAAGTTCTTTCTTACGA +
Preference number: 4 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKKTSQL*KSSFLR
Trigger: TCGTAAGAAAGAACTTTTGCAGAGCTGTGATGTTTT...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTCCAGGCCAGGTCCTCTaGACTCCTTTGTCTATTTTC +
Preference number: 4 (lower is better)
Translates to: IYDNRDLPRHWARCSTSTPGQVL*TPLSIF
Trigger: GAAAATAGACAAAGGAGTGCAGAGGACCTGGCCTGG...AGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp AAAGTTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTCTGCTCCTCAATCCTaGTGGCGTAGTACGCGAGCT +
Preference number: 4 (lower is better)
Translates to: KVPQNNKYRWSSQRKCRYSAPQS*WRSTRA
Trigger: AGCTCGCGTACTACGCCAGCAGGATTGAGGAGCAGA...GTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR GCA 90 bp AATGTGATTGCTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCACCAGATTCATCTGGGAAATCCCTaGAGAGAAGCAAAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NVIAVATYSPCIESHHQIHLGNP*REAKQV
Trigger: TACCTGCTTTGCTTCTCTGCAGGGATTTCCCAGATG...AATCTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTACATTACACTGGAGAGTaGAATCCCCAAAACATCACA +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVHYTGE*NPQNIT
Trigger: TGTGATGTTTTGGGGATTCCACTCTCCAGTGTAATG...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGAGGACATGGCTTTCTTaGCCTGTGCCACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLRTWLS*PVPLLC
Trigger: GCAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCT...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp TGGTCCAGAGAGGCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAGGATTGAGTTCAGACTaGAAGAATACCAGAGGTGTA +
Preference number: 4 (lower is better)
Translates to: WSREAKHGGHAVNGQVGSGLSSD*KNTRGV
Trigger: TACACCTCTGGTATTCTTCCAGTCTGAACTCAATCC...TGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGCCTCTCTGGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp AGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTGAATACAACCAACTGCAAACTCTTCATTCGTTCTaGGGAGTCCCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: STGGVPNGNAGTEYNQLQTLHSF*GVPNPE
Trigger: CTCTGGGTTTGGGACTCCTCAGAACGAATGAAGAGT...TTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGGGAACTCCACCTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR TCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTATTCACTTCTATGTGCTaGAGGAGGACTCTGGCCACG +
Preference number: 4 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLFTSMC*RRTLAT
Trigger: CGTGGCCAGAGTCCTCCTTCAGCACATAGAAGTGAA...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATTTGTTCCTTGGATCTaGAAACCCTTCAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLFVPWI*KPFKAS
Trigger: TGAAGCCTTGAAGGGTTTTCAGATCCAAGGAACAAA...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTACAGCGGGGATCTCCTTaGGCTCAGGTAAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLQRGSP*AQVNKP
Trigger: TGGCTTATTTACCTGAGCTCAAGGAGATCCCCGCTG...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACACCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGT +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTPSRPP*SRLFIR
Trigger: ACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGG...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACAAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTSRYTQ*LRRAKP
Trigger: AGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCT...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATTGGGAGTTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTTCTGTGTCCCACTGCATaGCTGGGTCATCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: IGSLETWFQLCQSRIDRLLCPTA*LGHLGN
Trigger: ATTTCCCAGATGACCCAGGCATGCAGTGGGACACAG...AAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp ACAGAGCAATGTGATTGCTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCAAGCTCTCTGTGGATTTaGAAATTTCCCCCTCATAAG +
Preference number: 4 (lower is better)
Translates to: TEQCDCCGHLLPLHRKSPSSLWI*KFPPHK
Trigger: CTTATGAGGGGGAAATTTGCAAATCCACAGAGAGCT...TGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp AATGTGATTGCTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCACCAGATTCAGTCATTTACAACCTaGCTAATTGGTTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: NVIAVATYSPCIESHHQIQSFTT*LIGWGM
Trigger: CATCCCCCAACCAATTAGGCAGGTTGTAAATGACTG...AATCTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATCATTACACTGGAGAGTaGAATCCCCAAAACATCACA +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHHYTGE*NPQNIT
Trigger: TGTGATGTTTTGGGGATTCCACTCTCCAGTGTAATG...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp AATACTTTATGTGGGTTAGGAAGAGTTCCTAACTCAGGCAGATTGGTTCATCAAGCTGAAGGAGGACTCTaGCCACGTGCTCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: NTLCGLGRVPNSGRLVHQAEGGL*PRALCP
Trigger: GGGACACAGAGCACGTGGCCAGAGTCCTCCTTCAGC...TTGATGAACCAATCTGCCTGAGTTAGGAACTCTTCCTAACCCACATAAAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACAAGCCCCTGGCCTACATaGGCTCCCTTTTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTSPWPT*APFCRG
Trigger: GCCTCTGCAAAAGGGAGCCCATGTAGGCCAGGGGCT...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp TGGTCCAGAGAGGCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCACAGGAATTACTGTATTaGGAGTTTAGAGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: WSREAKHGGHAVNGQVGSQELLY*EFRDLV
Trigger: AACCAGGTCTCTAAACTCCCAATACAGTAATTCCTG...TGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGCCTCTCTGGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp CCCCCTCATAAGTTTCTCAGAGGGACAGTATCTTGTGGCCCTTTGCAAAAGGAACTAGAGGTTGAGATCTaGCTACCTCAAAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PPHKFLRGTVSCGPLQKELEVEI*LPQSQR
Trigger: CCTTTGGCTTTGAGGTAGCCAGATCTCAACCTCTAG...TTCCTTTTGCAAAGGGCCACAAGATACTGTCCCTCTGAGAAACTTATGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp CACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAGTCCACTTCAAACTCTTCATTCGTTCTaGGGAGTCCCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: HSNPIDWASLEIDTSPLQTLHSF*GVPNPE
Trigger: CTCTGGGTTTGGGACTCCTCAGAACGAATGAAGAGT...TTGAAGTGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR TCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTATGTATGTGTTTTTGGTaGACCTGCTTTGGAAACAAT +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVCMCFW*TCFGNN
Trigger: ATTGTTTCCAAAGCAGGTTCACCAAAAACACATACA...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGTCTTTGTCCTCCCTCTaGCCAGATTTTGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLSLSSL*PDFDVV
Trigger: GACTACATCAAAATCTGGGCAGAGGGAGGACAAAGA...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAAGGACATGGCTTTCTTaGCCTGTGCCACTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLRTWLS*PVPLLC
Trigger: GCAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCT...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACATGCGGTGGCAGGACATaGCTTTCTTGGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTCGGRT*LSWPVP
Trigger: TGGCACAGGCCAAGAAAGCCATGTCCTGCCACCGCA...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTATTGGTGAACCTGCTTTaGAAACAATGTAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVLVNLL*KQCKSH
Trigger: GTGACTTTTACATTGTTTCCAAAGCAGGTTCACCAA...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp ATTGGGAGTTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTTGAGGGCAGCTCTCTGTaGATTTGCAAATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: IGSLETWFQLCQSRIDRLEGSSL*ICKFPP
Trigger: AGGGGGAAATTTGCAAATCCACAGAGAGCTGCCCTC...AAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp TTGGGGGATGGGATTGAGTTCAGACTGGAAGAATACCAGAGGTGTAAAACATCCCTAACTCAGGCAGATTaGTTCATCAAGCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGDGIEFRLEEYQRCKTSLTQAD*FIKHPA
Trigger: TGCTGGGTGCTTGATGAACCAATCTGCCTGAGTTAG...GGATGTTTTACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGAACTTTTGTGTGATATaGGCTCCCTTTTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLNFCVI*APFCRG
Trigger: GCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTT...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR TCA 90 bp ATTGGGAGTTTAGAGACCTGGTTCCAGCTCTGTCAGTCAAGAATTGACAGACTTGCATACAGAGCAATGTaGTTGCTGTGGCCACTTACT +
Preference number: 4 (lower is better)
Translates to: IGSLETWFQLCQSRIDRLAYRAM*LLWPLT
Trigger: AGTAAGTGGCCACAGCAATCACATTGCTCTGTATGC...AAGTCTGTCAATTCTTGACTGACAGAGCTGGAACCAGGTCTCTAAACTCCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGTTTGTTCCTTGGATCTaGAAACCCTTCAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLFVPWI*KPFKAS
Trigger: TGAAGCCTTGAAGGGTTTTCAGATCCAAGGAACAAA...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR TCA 90 bp CCAACGGAAATGCAGGTACTGAATACAACCAACTGCAACTGTTTCTCTGCTCCTCGGAAATGCAGGTACTaGATACAACCAACTGCAACT +
Preference number: 4 (lower is better)
Translates to: PTEMQVLNTTNCNCFSAPRKCRY*IQPTAT
Trigger: AGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCG...AGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR TCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCTACGTTTTCATTCATTaGATCTTCGTATTGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGYVFIH*IFVLRR
Trigger: CCGGCGCAATACGAAGATTCAATGAATGAAAACGTA...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp TCAGTCATCCCACATAGAAAGGGCACAAACTACTTACGTTTTCATTCATTGAATAGGACTCTGGCCACGTaGTCTGTGTCCCACTGCATG +
Preference number: 4 (lower is better)
Translates to: SVIPHRKGTNYLRFHSLNRTLAT*SVSHCM
Trigger: CATGCAGTGGGACACAGAGCACGTGGCCAGAGTCCT...ATTCAATGAATGAAAACGTAAGTAGTTTGTGCCCTTTCTATGTGGGATGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp GCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAGTCATTACACTGGAGAGTaGAATCCCCAAAACATCACA +
Preference number: 4 (lower is better)
Translates to: APLHSNPIDWASLEIDTSHYTGE*NPQNIT
Trigger: TGTGATGTTTTGGGGATTCCACTCTCCAGTGTAATG...ACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR CCA 90 bp CCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAGTCCATCCAACCCAATAGATTaGGCCTCCTTGGAAATAGAT +
Preference number: 4 (lower is better)
Translates to: PLHSNPIDWASLEIDTSPSNPID*ASLEID
Trigger: ATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGA...TGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR TCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACAAGCACATTCACAGACTaGAGCGTGAGCACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTSTFTD*SVSTEH
Trigger: GTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCT...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATAAAACATCACAGCTCTaGAAAAGTTCTTTCTTACGA +
Preference number: 4 (lower is better)
Translates to: IIGTCPGTGLGVPHLLCHKTSQL*KSSFLR
Trigger: TCGTAAGAAAGAACTTTTGCAGAGCTGTGATGTTTT...ATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACAATGATAATAGGGACCTaGCCAGGCACTGGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTMIIGT*PGTGLG
Trigger: ACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATCAT...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp GTGGAGTTCCCAACGGAAATGCAGGTACTGAATACAACCAACTGCAACTGTTTCCTGAATACAACCAACTaGAACTGTTTCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VEFPTEMQVLNTTNCNCFLNTTN*NCFSAP
Trigger: AGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAG...GAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGGGAACTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR CCA 90 bp CATAGAAAGGGCACAAACTACTTACGTTTTCATTCATTGAATCTTCGTATTGCGGTCCCACTGCATGCCTaGGTCATCTGGGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: HRKGTNYLRFHSLNLRIAVPLHA*VIWEIP
Trigger: AGGGATTTCCCAGATGACCCAGGCATGCAGTGGGAC...CGCAATACGAAGATTCAATGAATGAAAACGTAAGTAGTTTGTGCCCTTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp CATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTGGGTTACTACCAGAAAAAGGTTaGCTGCTAGAGGTTGAGATC +
Preference number: 4 (lower is better)
Translates to: HGGHAVNGQVGSNTLCGLLPEKG*LLEVEI
Trigger: GATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAG...TAACCCACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CCA 90 bp TCATTTACAACCTGCCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGGTTCCAAAGTCATCATaGCTTGGTAAGCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SFTTCLIGWGMGLSSDWKVPKSS*LGKLLS
Trigger: TGAAAGGAGCTTACCAAGCCATGATGACTTTGGAAC...CTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CAA 72 bp TTATGTGGGTTAGGAAGAGTTCCTAACTCAGGCAGATaGGTTCATCAAGCACCCAGCAGTCATTTACAACCT +
Preference number: 4 (lower is better)
Translates to: LCGLGRVPNSGR*VHQAPSSHLQP
Trigger: AGGTTGTAAATGACTGCTGGGTGCTTGATGAACCAATCTGCCTGAGTTAGGAACTCTTCCTAACCCACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACACCACTTCTTTGCTGTTaGGCACGAAGAGGACATCCT +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTPLLCC*ARRGHP
Trigger: AGGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGG...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACAGGAAGCTCAGTGAGTTaGTTCTCATGTACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTGSSVS*FSCTGR
Trigger: TCTCCCGGTACATGAGAATCAACTCACTGAGCTTCC...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR TCA 90 bp ATCGCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTATAGACACATCAGTCTaGGATATGACAATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: IAPLHSNPIDWASLEIDTIDTSV*DMTICC
Trigger: ACAACAGATTGTCATATCTCAGACTGATGTGTCTAT...AGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR TCA 90 bp TTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACTGAAGTTAACTTTAAGGATTaGGCAGGCACGATACAGCAT +
Preference number: 4 (lower is better)
Translates to: FHRITSTGGVPNGNAGTEVNFKD*AGTIQH
Trigger: ATGCTGTATCGTGCCTGCTCAATCCTTAAAGTTAAC...TTCAGTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR TCA 90 bp ATGCAGGTACTGAATACAACCAACTGCAACTGTTTCTCTGCTCCTCAATCCTGCAAAGCTGGGTGGAGTTaGACTCTAAAATTACCTACA +
Preference number: 4 (lower is better)
Translates to: MQVLNTTNCNCFSAPQSCKAGWS*TLKLPT
Trigger: TGTAGGTAATTTTAGAGTTCAACTCCACCCAGCTTT...GCAGGATTGAGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR TCA 90 bp CCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGGGCCCTGTCTCACAGGATTaGTATAAGAATCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: PKSSWLGKLLSVIPHRKGPVSQD*YKNQTN
Trigger: GTTTGTTTGATTCTTATATCAATCCTGTGAGACAGG...GCCCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR GCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACACAGGGCCCTCACAGCTaGATACAGAGCAATGTGATT +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTQGPHS*IQSNVI
Trigger: AATCACATTGCTCTGTATGCAGCTGTGAGGGCCCTG...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225609.10
CDS-3UTR CCA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTGGTGAACCTGCTTTaGAAACAATGTAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLLVNLL*KQCKSH
Trigger: GTGACTTTTACATTGTTTCCAAAGCAGGTTCACCAA...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp ATGTTCCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAGGGTCATGCAGTAAATaGTCAGGTAGGGTCAAATAC +
Preference number: 4 (lower is better)
Translates to: MFQSHHGLVSSFQSSHIEGSCSK*SGRVKY
Trigger: GTATTTGACCCTACCTGACCATTTACTGCATGACCC...TTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CAA 72 bp TCATTTACAACCTGCCTAATTGGTTGGGGGATGGGATaGAGTTCAGACTGGAAGAATACCAGAGGTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SFTTCLIGWGMG*SSDWKNTRGVK
Trigger: TTTTACACCTCTGGTATTCTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTATTTTTCACAAGAACTTaGGAAGCTAGCAGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLFFTRT*EASSVA
Trigger: AGCTACACTGCTAGCTTCTCAAGTTCTTGTGAAAAA...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR GCA 90 bp ATCGCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAAAACATCACAGCTCTaGAAAAGTTCTTTCTTACGA +
Preference number: 4 (lower is better)
Translates to: IAPLHSNPIDWASLEIDTKTSQL*KSSFLR
Trigger: TCGTAAGAAAGAACTTTTGCAGAGCTGTGATGTTTT...AGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR GCA 90 bp ATGCAGGTACTGAATACAACCAACTGCAACTGTTTCTCTGCTCCTCAATCCTGCCTTCAATTTGACACATaGATGTTACTAGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: MQVLNTTNCNCFSAPQSCLQFDT*MLLAQA
Trigger: AGCTTGTGCTAGTAACATGCATGTGTCAAATTGAAG...GCAGGATTGAGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR CCA 90 bp AATACTTTATGTGGGTTAGGAAGAGTTCCTAACTCAGGCAGATTGGTTCATCAAACCTGCCTAATTGGTTaGGGGATGGGATTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: NTLCGLGRVPNSGRLVHQTCLIG*GMGLSS
Trigger: TGAACTCAATCCCATCCCCCAACCAATTAGGCAGGT...TTGATGAACCAATCTGCCTGAGTTAGGAACTCTTCCTAACCCACATAAAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CAA 72 bp CATAGAAAGGGCACAAACTACTTACGTTTTCATTCATaGAATCTTCGTATTGCGCCGGTGAGGTATGACAGA +
Preference number: 4 (lower is better)
Translates to: HRKGTNYLRFHS*NLRIAPVRYDR
Trigger: TCTGTCATACCTCACCGGCGCAATACGAAGATTCAATGAATGAAAACGTAAGTAGTTTGTGCCCTTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTATGTATGTGTTTTTGGTaGACCTGCTTTGGAAACAAT +
Preference number: 4 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLCMCFW*TCFGNN
Trigger: ATTGTTTCCAAAGCAGGTTCACCAAAAACACATACA...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp TCAGTCATCCCACATAGAAAGGGCACAAACTACTTACGTTTTCATTCATTGAATAGGGACAGTATCTTGTaGCCCTTTGCAAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: SVIPHRKGTNYLRFHSLNRDSIL*PFAKGT
Trigger: TGTTCCTTTTGCAAAGGGCCACAAGATACTGTCCCT...ATTCAATGAATGAAAACGTAAGTAGTTTGTGCCCTTTCTATGTGGGATGACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585034.5
3UTR CAA 72 bp AAACAAACTATAGTCATGTTCCAAAGTCATCATGGCTaGGTAAGCTCCTTTCAGTCATCCCACATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KQTIVMFQSHHG*VSSFQSSHIER
Trigger: CCTTTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGGAACATGACTATAGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR TCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACATTTTTCACAAGAACTTaGGAAGCTAGCAGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTFFTRT*EASSVA
Trigger: AGCTACACTGCTAGCTTCTCAAGTTCTTGTGAAAAA...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CCA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACAAGCTATTATTATCCTTaGGGTGGTTTGTTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTSYYYP*GGLFLV
Trigger: AACCAAAAACAAACCACCCCAAGGATAATAATAGCT...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS GCA 90 bp CACTTACTCCCCCTGCATCGAAAGTCACCACCTCAGCCTGCCGAGTaGCTGCGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCG +
Preference number: 5 (lower is better)
Translates to: HLLPLHRKSPPQPAE*LRLQARAATPDWFS
Trigger: CGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGTGGTGACTTTCGATGCAGGGGGAGTAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 90 bp GCTATGACCAGCAGGGTCCGGCTTTCGGCTCCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGTTCTGAGGAGTCCCAAACCCAGAGG +
Preference number: 5 (lower is better)
Translates to: AMTSRVRLSAPSRPP*SRLFIRSEESQTQR
Trigger: CCTCTGGGTTTGGGACTCCTCAGAACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGGAGCCGAAAGCCGGACCCTGCTGGTCATAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000463810.2
ENST00000470116.2
ENST00000477745.5
ENST00000489009.1
ENST00000498772.6
ENST00000581006.5
ENST00000584797.5
ENST00000585034.5
ENST00000607144.4
CDS GCA 90 bp TACTCCCCCTGCATCGAAAGTCACCACCTCAGCCTGCCGAGTGCCTaGGATTGCAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGTATT +
Preference number: 5 (lower is better)
Translates to: YSPCIESHHLSLPSA*DCRRAPPRLTGFRI
Trigger: AATACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGTGGTGACTTTCGATGCAGGGGGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS-3UTR CAA 90 bp GTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCGCCTGTGCCACTTCTTaGCTGTTGAGCACGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VIWAPFCRGCSSGDLLELACATS*LLSTKR
Trigger: CCTCTTCGTGCTCAACAGCAAAGAAGTGGCACAGGC...GAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS GCA 90 bp AGCTGCATACAGAGCAATGTGATTGCTGTGGCCACTTACTCCCCCTaGATCGAAAGTCACCACCTCAGCCTGCCGAGTGCCTGCGATTGC +
Preference number: 5 (lower is better)
Translates to: SCIQSNVIAVATYSP*IESHHLSLPSACDC
Trigger: GCAATCGCAGGCACTCGGCAGGCTGAGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGTATGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 90 bp TGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGGATaGAGGTGGCTGCTCACAATCTGGAATTTGCTCTGTCTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: WGRLALMAGPLRHRG*RWLLTIWNLLCLSD
Trigger: ATCTGAAAGACAGAGCAAATTCCAGATTGTGAGCAGCCACCTGCATCCTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS GCA 90 bp TGTGCTGAAGGAGGACTCTGGCCACGTGCTCTGTGTCCCACTGCATaGCTGGGTCATCTGGGAAATCCCTGCAGAGAAGCAAAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: CAEGGLWPRALCPTA*LGHLGNPCREAKQV
Trigger: TACCTGCTTTGCTTCTCTGCAGGGATTTCCCAGATGACCCAGGCATGCAGTGGGACACAGAGCACGTGGCCAGAGTCCTCCTTCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS CCA 90 bp CTTGCGCAGCACATTCACAGACTGAAGCGTGAGCACAGAGCACCCTaGATGGAGAGGAGACAGGGTGAAGTGATAAGCCTTGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LAQHIHRLKREHRAP*MERRQGEVISLEAS
Trigger: GGAGGCCTCAAGGCTTATCACTTCACCCTGTCTCCTCTCCATCCAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCTGCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488375.2
CDS-3UTR CAA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAACAGGACATGGCTTTCTaGGCCTGTGCCACTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKQDMAF*ACATSL
Trigger: CAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCTG...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000596678.2
CDS GCA 90 bp CGTGAGCACAGAGCACCCTCACAGCTGCATACAGAGCAATGTGATTaGTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCACCTCAG +
Preference number: 5 (lower is better)
Translates to: REHRAPSQLHTEQCD*CGHLLPLHRKSPPQ
Trigger: CTGAGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGTATGCAGCTGTGAGGGTGCTCTGTGCTCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS-3UTR CAA 90 bp GTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGAAGGGAGATGTACTaGCGCAGCACATTCACAGAC +
Preference number: 5 (lower is better)
Translates to: VIWAPFCRGCSSGDLLELRREMY*RSTFTD
Trigger: GTCTGTGAATGTGCTGCGCAAGTACATCTCCCTTCT...GAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CAA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAGGAAGAAGCTGGAGTTaGGACAGCCCCTGGCCTACA +
Preference number: 5 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSGRSWS*DSPWPT
Trigger: TGTAGGCCAGGGGCTGTCCAAACTCCAGCTTCTTCC...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS TCA 90 bp GGTGGCAGGACATGGCTTTCTTGGCCTGTGCCACTTCTTTGCTGTTaGGCACGAAGAGGACATCCTGCGTATGAAGCAGAGACAAGGGCA +
Preference number: 5 (lower is better)
Translates to: GGRTWLSWPVPLLCC*ARRGHPAYEAETRA
Trigger: TGCCCTTGTCTCTGCTTCATACGCAGGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCTGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000488375.2
ENST00000596678.2
CDS GCA 90 bp CGTGAGCACAGAGCACCCTCACAGCTGCATACAGAGCAATGTGATTaGTGTGGCCACTTACTCCCCCTGCATCGAAAGTCACCACCAGAT +
Preference number: 5 (lower is better)
Translates to: REHRAPSQLHTEQCD*CGHLLPLHRKSPPD
Trigger: ATCTGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGTATGCAGCTGTGAGGGTGCTCTGTGCTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395844.8
CDS GCA 90 bp TACACAGCTGGTCATTCTGGCTTCAATCGCAGGACTACCAGCCTGTaGTCTTCACCACTTAGCTTCCCTGACTCAGGCCACTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: YTAGHSGFNRRTTSL*SSPLSFPDSGHFPG
Trigger: TCCAGGGAAGTGGCCTGAGTCAGGGAAGCTAAGTGGTGAAGAGCACAGGCTGGTAGTCCTGCGATTGAAGCCAGAATGACCAGCTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431149.5
CDS-3UTR CAA 90 bp CATCTGTGGGGTCGGCTGGCTCTCATGGCTGGGCCGCTCAGGCATAGAGGATGCTCTGGGAAATCCCTGTaGTCAATAATCATTACACTG +
Preference number: 5 (lower is better)
Translates to: HLWGRLALMAGPLRHRGCSGKSL*SIIITL
Trigger: CAGTGTAATGATTATTGACAACAGGGATTTCCCAGA...GCATCCTCTATGCCTGAGCGGCCCAGCCATGAGAGCCAGCCGACCCCACAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS TCA 90 bp GGCAGATCCAGAAGGGAGATGTACTTGCGCAGCACATTCACAGACTaGAGCGTGAGCACAGAGCACCCTCACAGCTGCATACAGAGCAAT +
Preference number: 5 (lower is better)
Translates to: GRSRREMYLRSTFTD*SVSTEHPHSCIQSN
Trigger: ATTGCTCTGTATGCAGCTGTGAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCTGCGCAAGTACATCTCCCTTCTGGATCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395844.8
ENST00000596678.2
CDS-3UTR CAA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAGCCACTTCTTTGCTGTaGAGCACGAAGAGGACATCC +
Preference number: 5 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSATSLL*STKRTS
Trigger: GGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGGC...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp GGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTACAGGACATGGCTTTCTaGGCCTGTGCCACTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GTCPGTGLGVPHLLCHYVQDMAF*ACATSL
Trigger: CAAAGAAGTGGCACAGGCCAAGAAAGCCATGTCCTG...TACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp TGGTCCAGAGAGGCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCACCTAACTCAGGCAGATaGGTTCATCAAGCACCCAGC +
Preference number: 5 (lower is better)
Translates to: WSREAKHGGHAVNGQVGSPNSGR*VHQAPS
Trigger: GCTGGGTGCTTGATGAACCAATCTGCCTGAGTTAGG...TGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGCCTCTCTGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp GTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCTTCTCTTCCCAACTTTaGTGTGATATGGGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: VIWAPFCRGCSSGDLLELFSSQL*CDMGSL
Trigger: AAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAA...GAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS TCA 90 bp TGTGCCACTTCTTTGCTGTTGAGCACGAAGAGGACATCCTGCGTATaGAGCAGAGACAAGGGCAGATCCAGAAGGGAGATGTACTTGCGC +
Preference number: 5 (lower is better)
Translates to: CATSLLLSTKRTSCV*SRDKGRSRREMYLR
Trigger: GCGCAAGTACATCTCCCTTCTGGATCTGCCCTTGTCTCTGCTTCATACGCAGGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000477745.5
ENST00000488375.2
ENST00000596678.2
CDS-3UTR CAA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAAGAAGGGAGATGTACTaGCGCAGCACATTCACAGAC +
Preference number: 5 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSRREMY*RSTFTD
Trigger: GTCTGTGAATGTGCTGCGCAAGTACATCTCCCTTCT...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp TCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGCTCCAGCGCCACTTCTTTGCTGTaGAGCACGAAGAGGACATCC +
Preference number: 5 (lower is better)
Translates to: SLPNFCVIWAPFCRGCSSATSLL*STKRTS
Trigger: GGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGGC...GCTGGAGCAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CAA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGGGAAGAAGCTGGAGTTaGGACAGCCCCTGGCCTACA +
Preference number: 5 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLGRSWS*DSPWPT
Trigger: TGTAGGCCAGGGGCTGTCCAAACTCCAGCTTCTTCC...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp CTACCAGAAAAAGGTTGGCTGCTAGAGGTTGAGATCTGGCTACCTCAAAGCCAACCTGCAGGCAGGCACTaGCTGGTAGATACAACCTGC +
Preference number: 5 (lower is better)
Translates to: LPEKGWLLEVEIWLPQSQPAGRH*LVDTTC
Trigger: GCAGGTTGTATCTACCAGCAAGTGCCTGCCTGCAGG...TTGGCTTTGAGGTAGCCAGATCTCAACCTCTAGCAGCCAACCTTTTTCTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp CTGGCTGGCTACCCTCTACCCTGCGGTGTGCCCTACCAGAAAAAGGTTGGCTGCTTACGTTTTCATTCATaGAATCTTCGTATTGCGCCG +
Preference number: 5 (lower is better)
Translates to: LAGYPLPCGVPYQKKVGCLRFHS*NLRIAP
Trigger: CGGCGCAATACGAAGATTCAATGAATGAAAACGTAA...GCAGCCAACCTTTTTCTGGTAGGGCACACCGCAGGGTAGAGGGTAGCCAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAATCTGGGAAATCCCTGTaGTCAATAATCATTACACTG +
Preference number: 5 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKSGKSL*SIIITL
Trigger: CAGTGTAATGATTATTGACAACAGGGATTTCCCAGA...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp AATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTAAGGAAGCTCAGTGAGTaGATTCTCATGTACCGGGAG +
Preference number: 5 (lower is better)
Translates to: NRDLPRHWARCSTSTVSLRKLSE*ILMYRE
Trigger: CTCCCGGTACATGAGAATCAACTCACTGAGCTTCCT...TAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS CCA 90 bp GCAGATGAGAGAATTGAGGCAGAGAAAGGTTCAGCACCTTGCCTTTaGTTACACAGCTGGTCATTCTGGCTTCAATCGCAGGACTACCAG +
Preference number: 5 (lower is better)
Translates to: ADERIEAEKGSAPCL*LHSWSFWLQSQDYQ
Trigger: CTGGTAGTCCTGCGATTGAAGCCAGAATGACCAGCTGTGTAACCAAAGGCAAGGTGCTGAACCTTTCTCTGCCTCAATTCTCTCATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431149.5
CDS-3UTR CAA 90 bp GGGCTCCCTTTTGCAGAGGCTGCTCCAGCGGGGATCTCCTTGAGCTCAGGTAAATTTGTGTATGTGTTTTaGGTGAACCTGCTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: GLPFAEAAPAGISLSSGKFVYVF*VNLLWK
Trigger: TTTCCAAAGCAGGTTCACCAAAAACACATACACAAA...TTTACCTGAGCTCAAGGAGATCCCCGCTGGAGCAGCCTCTGCAAAAGGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCAAAAGTCACCACCAGATaGATGCCATTCACTTCTATG +
Preference number: 5 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSKVTTR*MPFTSM
Trigger: CATAGAAGTGAATGGCATCAATCTGGTGGTGACTTT...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGCCTGTGCCACTTCTTaGCTGTTGAGCACGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLACATS*LLSTKR
Trigger: CCTCTTCGTGCTCAACAGCAAAGAAGTGGCACAGGC...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGAGGAAGCTCAGTGAGTaGATTCTCATGTACCGGGAG +
Preference number: 5 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLRKLSE*ILMYRE
Trigger: CTCCCGGTACATGAGAATCAACTCACTGAGCTTCCT...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CAA 90 bp GATAATAGGGACCTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATATCCTTGGGGTGGTTaGTTTTTGGTTCTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: DNRDLPRHWARCSTSTVSYPWGG*FLVLWV
Trigger: AACCCAAAGAACCAAAAACAAACCACCCCAAGGATA...TGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAGGTCCCTATTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAGCCACTTCTTTGCTGTaGAGCACGAAGAGGACATCC +
Preference number: 5 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLATSLL*STKRTS
Trigger: GGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGGC...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAAGGAAGCTCAGTGAGTaGATTCTCATGTACCGGGAG +
Preference number: 5 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLRKLSE*ILMYRE
Trigger: CTCCCGGTACATGAGAATCAACTCACTGAGCTTCCT...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp GCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTCAGAGGGACAGTATCTaGTGGCCCTTTGCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: AKHGGHAVNGQVGSNTLCQRDSI*WPFAKG
Trigger: TCCTTTTGCAAAGGGCCACAAGATACTGTCCCTCTG...ACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp ACATCCTTCTCTTCCCAACTTTTGTGTGATATGGGCTCCCTTTTGCAGAGGCTGTTTCCCCTTTGTTCCTaGGATCTGAAAACCCTTCAA +
Preference number: 5 (lower is better)
Translates to: TSFSSQLLCDMGSLLQRLFPLCS*DLKTLQ
Trigger: TTGAAGGGTTTTCAGATCCAAGGAACAAAGGGGAAA...CAGCCTCTGCAAAAGGGAGCCCATATCACACAAAAGTTGGGAAGAGAAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000596678.2
CDS-3UTR CAA 90 bp ATCGCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTATAGATTGGGCCTCCTaGGAAATAGATACTAGTCCA +
Preference number: 5 (lower is better)
Translates to: IAPLHSNPIDWASLEIDTIDWAS*EIDTSP
Trigger: TGGACTAGTATCTATTTCCAAGGAGGCCCAATCTAT...AGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR CAA 90 bp CACTCCAACCCAATAGATTGGGCCTCCTTGGAAATAGATACTAGTCCACTTCAACTCCAACCCAATAGATaGGGCCTCCTTGGAAATAGA +
Preference number: 5 (lower is better)
Translates to: HSNPIDWASLEIDTSPLQLQPNR*GLLGNR
Trigger: TCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAG...TTGAAGTGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS-3UTR CAA 90 bp ATGTTCCAAAGTCATCATGGCTTGGTAAGCTCCTTTCAGTCATCCCACATAGAAAACCTGCCTAATTGGTaGGGGGATGGGATTGAGTTC +
Preference number: 5 (lower is better)
Translates to: MFQSHHGLVSSFQSSHIENLPNW*GDGIEF
Trigger: GAACTCAATCCCATCCCCCAACCAATTAGGCAGGTT...TTCTATGTGGGATGACTGAAAGGAGCTTACCAAGCCATGATGACTTTGGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp TCATTTACAACCTGCCTAATTGGTTGGGGGATGGGATTGAGTTCAGACTGGAAGCAAGAATTGACAGACTaGGCAAAGTCCCTTAACCAC +
Preference number: 5 (lower is better)
Translates to: SFTTCLIGWGMGLSSDWKQELTD*AKSLNH
Trigger: GTGGTTAAGGGACTTTGCCAAGTCTGTCAATTCTTG...CTTCCAGTCTGAACTCAATCCCATCCCCCAACCAATTAGGCAGGTTGTAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp GCTAAGCATGGGGGTCATGCAGTAAATGGTCAGGTAGGGTCAAATACTTTATGTCAAAGTCATCATGGCTaGGTAAGCTCCTTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: AKHGGHAVNGQVGSNTLCQSHHG*VSSFQS
Trigger: TGACTGAAAGGAGCTTACCAAGCCATGATGACTTTG...ACATAAAGTATTTGACCCTACCTGACCATTTACTGCATGACCCCCATGCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp AGAGCACTTTTATGTTCATTTATGATAATAGGGACCTGCCCAGGCACTGGGCTAAAAGTCACCACCAGATaGATGCCATTCACTTCTATG +
Preference number: 5 (lower is better)
Translates to: RALLCSFMIIGTCPGTGLKVTTR*MPFTSM
Trigger: CATAGAAGTGAATGGCATCAATCTGGTGGTGACTTT...TAGCCCAGTGCCTGGGCAGGTCCCTATTATCATAAATGAACATAAAAGTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp CTGCCCAGGCACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTGTGTATGTGTTTTaGGTGAACCTGCTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LPRHWARCSTSTVSLCKLFVYVF*VNLLWK
Trigger: TTTCCAAAGCAGGTTCACCAAAAACACATACACAAA...CAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTGCCTGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp AAAGTTCCACAGAATAACAAGTACAGGTGGAGTTCCCAACGGAAATGCAGGTACGAAAGCTGGGTGGAGTaGAACTCTAAAATTACCTAC +
Preference number: 5 (lower is better)
Translates to: KVPQNNKYRWSSQRKCRYESWVE*NSKITY
Trigger: GTAGGTAATTTTAGAGTTCAACTCCACCCAGCTTTC...GTACCTGCATTTCCGTTGGGAACTCCACCTGTACTTGTTATTCTGTGGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR CAA 90 bp CCAACGGAAATGCAGGTACTGAATACAACCAACTGCAACTGTTTCTCTGCTCCTACGATACAGCATAGATaGTTTCGTGTGCTATATAGT +
Preference number: 5 (lower is better)
Translates to: PTEMQVLNTTNCNCFSAPTIQHR*FRVLYS
Trigger: ACTATATAGCACACGAAACAATCTATGCTGTATCGT...AGGAGCAGAGAAACAGTTGCAGTTGGTTGTATTCAGTACCTGCATTTCCGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS-3UTR CAA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACATTTCCCCTTTGTTCCTaGGATCTGAAAACCCTTCAA +
Preference number: 5 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTFPLCS*DLKTLQ
Trigger: TTGAAGGGTTTTCAGATCCAAGGAACAAAGGGGAAA...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS-3UTR CAA 90 bp CATAGAAAGGGCACAAACTACTTACGTTTTCATTCATTGAATCTTCGTATTGCGTCTGTCAGTCAAGAATaGACAGACTTGGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: HRKGTNYLRFHSLNLRIASVSQE*TDLAKS
Trigger: GGACTTTGCCAAGTCTGTCAATTCTTGACTGACAGA...CGCAATACGAAGATTCAATGAATGAAAACGTAAGTAGTTTGTGCCCTTTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS-3UTR CAA 90 bp CACTGGGCTAGGTGTTCCACATCTACTGTGTCATTATGTAAATTGTTTTTCACATCTGGGAAATCCCTGTaGTCAATAATCATTACACTG +
Preference number: 5 (lower is better)
Translates to: HWARCSTSTVSLCKLFFTSGKSL*SIIITL
Trigger: CAGTGTAATGATTATTGACAACAGGGATTTCCCAGA...TGTGAAAAACAATTTACATAATGACACAGTAGATGTGGAACACCTAGCCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000395844.8
CDS TCA 72 bp GGAGCGTCTCTGCCTGGCCACCCATCGTCTGGGATGTaGGGAGCCCCTCTGCCCGGCCGCCCAGTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: GASLPGHPSSGM*GAPLPGRPVWE
Trigger: TTCCCAGACTGGGCGGCCGGGCAGAGGGGCTCCTCACATCCCAGACGATGGGTGGCCAGGCAGAGACGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 72 bp CGGCCGCCACCCCGTCTGGGAAGTGAGGAGCGTCTCTaGCTGGCCACCCATCGTCTGGGATGTGAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: RPPPRLGSEERL*LATHRLGCEEP
Trigger: GGGCTCCTCACATCCCAGACGATGGGTGGCCAGGCAGAGACGCTCCTCACTTCCCAGACGGGGTGGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 72 bp CCCCTGCATCGAAAGTCACCACCTCAGCCTGCCGAGTaGCTGCGATTGCAGGCGCGCGCCGCCACGCCTGAC +
Preference number: 6 (lower is better)
Translates to: PLHRKSPPQPAE*LRLQARAATPD
Trigger: GTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGTGGTGACTTTCGATGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 72 bp TGCATCGAAAGTCACCACCTCAGCCTGCCGAGTGCCTaGGATTGCAGGCGCGCGCCGCCACGCCTGACTGGT +
Preference number: 6 (lower is better)
Translates to: CIESHHLSLPSA*DCRRAPPRLTG
Trigger: ACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGTGGTGACTTTCGATGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 72 bp CTTACTCCCCCTGCATCGAAAGTCACCACCTCAGCCTaGCGAGTGCCTGCGATTGCAGGCGCGCGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: LTPPASKVTTSA*RVPAIAGARRH
Trigger: GTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGTGGTGACTTTCGATGCAGGGGGAGTAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 72 bp GAAAGTCACCACCTCAGCCTGCCGAGTGCCTGCGATTaGAGGCGCGCGCCGCCACGCCTGACTGGTTTTCGT +
Preference number: 6 (lower is better)
Translates to: ESHHLSLPSACD*RRAPPRLTGFR
Trigger: ACGAAAACCAGTCAGGCGTGGCGGCGCGCGCCTGCAATCGCAGGCACTCGGCAGGCTGAGGTGGTGACTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 72 bp AGCAGGGTCCGGCTTTCGGCTCCCAGCCGTCCTCCCTaGTCCCGACTCTTCATTCGTTCTGAGGAGTCCCAA +
Preference number: 6 (lower is better)
Translates to: SRVRLSAPSRPP*SRLFIRSEESQ
Trigger: TTGGGACTCCTCAGAACGAATGAAGAGTCGGGAGCAGGGAGGACGGCTGGGAGCCGAAAGCCGGACCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000463810.2
ENST00000470116.2
ENST00000477745.5
ENST00000489009.1
ENST00000498772.6
ENST00000581006.5
ENST00000584797.5
ENST00000585034.5
ENST00000607144.4
CDS GCA 72 bp ATCTCGGCTAGCTACAACCTCCACCTCCCAGCCGCCTaGCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: ISASYNLHLPAA*LGLPKCRDCSL
Trigger: GAGGCTGCAATCTCGGCACTTTGGGAGGCCAAGGCAGGCGGCTGGGAGGTGGAGGTTGTAGCTAGCCGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS CAA 72 bp GGTCTCCAGCTCCTAACCGCAAGTGATCTGCCAGCCTaGGCCTCCCAAGGTGCCGGGATTGCAGACGGAGTC +
Preference number: 6 (lower is better)
Translates to: GLQLLTASDLPA*ASQGAGIADGV
Trigger: GACTCCGTCTGCAATCCCGGCACCTTGGGAGGCCAAGGCTGGCAGATCACTTGCGGTTAGGAGCTGGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS TCA 72 bp GTGATAAGCCTTGAGGCCTCCAGCCAGATTTTCCCCTaGGCATCCTCCCTCTACCCTGTGGCTCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: VISLEASSQIFP*ASSLYPVAQGR
Trigger: CCTGCCCTGAGCCACAGGGTAGAGGGAGGATGCTCAGGGGAAAATCTGGCTGGAGGCCTCAAGGCTTATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488375.2
CDS GCA 72 bp CGGAAAACTGCAGAGAAGCAAAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCTAGCACTGTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: RKTAEKQSRYTQ*LRRAKPSTVGA
Trigger: TGCTCCCACAGTGCTAGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCTTTGCTTCTCTGCAGTTTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463810.2
CDS GCA 72 bp CAGAGCAATGTGATTGCTGTGGCCACTTACTCCCCCTaGATCGAAAGTCACCACCTCAGCCTGCCGAGTGCC +
Preference number: 6 (lower is better)
Translates to: QSNVIAVATYSP*IESHHLSLPSA
Trigger: GGCACTCGGCAGGCTGAGGTGGTGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS GCA 72 bp GAAATCCCTGCAGAGAAGCAAAGCAGGTACACCCAGTaGCTTAGGCGGGCCAAGCCTAGCACTGTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: EIPAEKQSRYTQ*LRRAKPSTVGA
Trigger: TGCTCCCACAGTGCTAGGCTTGGCCCGCCTAAGGCACTGGGTGTACCTGCTTTGCTTCTCTGCAGGGATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585034.5
CDS CAA 72 bp GTGATCTGCCAGCCTTGGCCTCCCAAGGTGCCGGGATaGCAGACGGAGTCTCGTTCACTCAGTGCTCAATGT +
Preference number: 6 (lower is better)
Translates to: VICQPWPPKVPG*QTESRSLSAQC
Trigger: ACATTGAGCACTGAGTGAACGAGACTCCGTCTGCAATCCCGGCACCTTGGGAGGCCAAGGCTGGCAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580201.1
CDS TCA 72 bp AGATGTACTTGCGCAGCACATTCACAGACTGAAGCGTaGGCACAGAGCACCCTGGATGGAGAGGAGACAGGG +
Preference number: 6 (lower is better)
Translates to: RCTCAAHSQTEA*AQSTLDGEETG
Trigger: CCCTGTCTCCTCTCCATCCAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCTGCGCAAGTACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488375.2
CDS GCA 72 bp GGTCATTCTGGCTTCAATCGCAGGACTACCAGCCTGTaGTCTTCACCACTTAGCTTCCCTGACTCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: GHSGFNRRTTSL*SSPLSFPDSGH
Trigger: GTGGCCTGAGTCAGGGAAGCTAAGTGGTGAAGAGCACAGGCTGGTAGTCCTGCGATTGAAGCCAGAATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431149.5
CDS GCA 72 bp AGTTCTCTGGCTATTCTGGGCACACTTCCTACACCCTaGTCTGGGCTGCTGGTTCCGTTGACTAGGGTCATC +
Preference number: 6 (lower is better)
Translates to: SSLAILGTLPTP*SGLLVPLTRVI
Trigger: GATGACCCTAGTCAACGGAACCAGCAGCCCAGAGCAGGGTGTAGGAAGTGTGCCCAGAATAGCCAGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431149.5
CDS CAA 72 bp GCTGGTAGAGCTGGTGTTGCTGGGCTGCTGGTTCCGTaGACTAGGGTCATCTTGATCTCTGCAGTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: AGRAGVAGLLVP*TRVILISAVCS
Trigger: GGAGCAAACTGCAGAGATCAAGATGACCCTAGTCAACGGAACCAGCAGCCCAGCAACACCAGCTCTACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414755.1
CDS TCA 72 bp GCACAGAGCACCCTCACAGCTGCATACAGAGCAATGTaGTTGCTGTGGCCACTTACTCCCCCTGCATCGAAA +
Preference number: 6 (lower is better)
Translates to: AQSTLTAAYRAM*LLWPLTPPASK
Trigger: TTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGTATGCAGCTGTGAGGGTGCTCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395844.8
ENST00000580201.1
ENST00000596678.2
CDS TCA 72 bp GAGACTCCGTCTTGGCCTGTGCCACTTCTTTGCTGTTaGGCACGAAGAGGACATCCTGCGTATGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: ETPSWPVPLLCC*ARRGHPAYEAE
Trigger: CTCTGCTTCATACGCAGGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGGCACAGGCCAAGACGGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477745.5
CDS CCA 72 bp CTCATGGCTGGGCCGCTCAGGCATAGAGGATGCAGGTaGCTGCTCACAATCTGGAATTTGCTCTGTCTTTCA +
Preference number: 6 (lower is better)
Translates to: LMAGPLRHRGCR*LLTIWNLLCLS
Trigger: TGAAAGACAGAGCAAATTCCAGATTGTGAGCAGCCACCTGCATCCTCTATGCCTGAGCGGCCCAGCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581006.5
CDS TCA 72 bp AGAAGGGAGATGTACTTGCGCAGCACATTCACAGACTaGAGCGTGAGCACAGAGCACCCTCACAGCTGCATA +
Preference number: 6 (lower is better)
Translates to: RREMYLRSTFTD*SVSTEHPHSCI
Trigger: TATGCAGCTGTGAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCTGCGCAAGTACATCTCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395844.8
ENST00000596678.2
CDS GCA 72 bp AGAGCACCCTCACAGCTGCATACAGAGCAATGTGATTaGTGTGGCCACTTACTCCCCCTGCATCGAAAGTCA +
Preference number: 6 (lower is better)
Translates to: RAPSQLHTEQCD*CGHLLPLHRKS
Trigger: TGACTTTCGATGCAGGGGGAGTAAGTGGCCACAGCAATCACATTGCTCTGTATGCAGCTGTGAGGGTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395844.8
ENST00000580201.1
ENST00000596678.2
CDS CCA 72 bp TCAGCACCTTGCCTTTGGTTACACAGCTGGTCATTCTaGCTTCAATCGCAGGACTACCAGCCTGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SAPCLWLHSWSF*LQSQDYQPVLF
Trigger: GAAGAGCACAGGCTGGTAGTCCTGCGATTGAAGCCAGAATGACCAGCTGTGTAACCAAAGGCAAGGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431149.5
CDS CCA 72 bp CACATTCACAGACTGAAGCGTGAGCACAGAGCACCCTaGATGGAGAGGAGACAGGGTGAAGTGATAAGCCTT +
Preference number: 6 (lower is better)
Translates to: HIHRLKREHRAP*MERRQGEVISL
Trigger: AAGGCTTATCACTTCACCCTGTCTCCTCTCCATCCAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488375.2
CDS TCA 72 bp ACATGGCTTTCTTGGCCTGTGCCACTTCTTTGCTGTTaGGCACGAAGAGGACATCCTGCGTATGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: TWLSWPVPLLCC*ARRGHPAYEAE
Trigger: CTCTGCTTCATACGCAGGATGTCCTCTTCGTGCTCAACAGCAAAGAAGTGGCACAGGCCAAGAAAGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000488375.2
ENST00000596678.2
CDS CAA 72 bp GTTGCTGGGCTGCTGGTTCCGTTGACTAGGGTCATCTaGATCTCTGCAGTTTGCTCCAGCTACCAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: VAGLLVPLTRVI*ISAVCSSYQFL
Trigger: AAGAAACTGGTAGCTGGAGCAAACTGCAGAGATCAAGATGACCCTAGTCAACGGAACCAGCAGCCCAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414755.1
CDS CAA 72 bp TGCTCTGGGCTGCTGGTTCCGTTGACTAGGGTCATCTaGATCTCTGCAGTTTGCTCCAGCTACCAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: CSGLLVPLTRVI*ISAVCSSYQFL
Trigger: AAGAAACTGGTAGCTGGAGCAAACTGCAGAGATCAAGATGACCCTAGTCAACGGAACCAGCAGCCCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431149.5
CDS CAA 90 bp GCCGAGATCGCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTaGGAAATAGATACTAGTCCACTTCAAGCCTGTATTCACCCCATT +
Preference number: 6 (lower is better)
Translates to: AEIAPLHSNPIDWAS*EIDTSPLQACIHPI
Trigger: AATGGGGTGAATACAGGCTTGAAGTGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGCGATCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS TCA 72 bp AGAAGGGAGATGTACTTGCGCAGCACATTCACAGACTaGAGCGTGAGCACAGAGCACCCTTTAGGTAACTTC +
Preference number: 6 (lower is better)
Translates to: RREMYLRSTFTD*SVSTEHPLGNF
Trigger: GAAGTTACCTAAAGGGTGCTCTGTGCTCACGCTTCAGTCTGTGAATGTGCTGCGCAAGTACATCTCCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225609.10
ENST00000477745.5
CDS GCA 72 bp ATGGGACCAAGACCTCAGGTTTTCCATTCAGGGAGCTaGCCCCTTACCAGATTGATGCCATTCACTTCTATG +
Preference number: 6 (lower is better)
Translates to: MGPRPQVFHSGS*PLTRLMPFTSM
Trigger: CATAGAAGTGAATGGCATCAATCTGGTAAGGGGGCAGCTCCCTGAATGGAAAACCTGAGGTCTTGGTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607144.4
CDS GCA 72 bp GATGAGAGAATTGAGGCAGAGAAAGGTTCAGCACCTTaGCTTTGGTTACACAGCTGGTCATTCTGGCTTCAA +
Preference number: 6 (lower is better)
Translates to: DERIEAEKGSAP*LWLHSWSFWLQ
Trigger: TTGAAGCCAGAATGACCAGCTGTGTAACCAAAGGCAAGGTGCTGAACCTTTCTCTGCCTCAATTCTCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431149.5
CDS CAA 72 bp GCACCGTTGCACTCCAACCCAATAGATTGGGCCTCCTaGGAAATAGATACTAGTCCACTTCAAGCCTGTATT +
Preference number: 6 (lower is better)
Translates to: APLHSNPIDWAS*EIDTSPLQACI
Trigger: AATACAGGCTTGAAGTGGACTAGTATCTATTTCCAAGGAGGCCCAATCTATTGGGTTGGAGTGCAACGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470116.2
CDS TCA 72 bp TTTAGGCAGCTCTTTGTCCTCCCTCTGCCCAGATTTTaGTGTAGTCTAATTGACATCCTTCTCTTCCCAACT +
Preference number: 6 (lower is better)
Translates to: FRQLFVLPLPRF*CSLIDILLFPT
Trigger: AGTTGGGAAGAGAAGGATGTCAATTAGACTACATCAAAATCTGGGCAGAGGGAGGACAAAGAGCTGCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414755.1
ENST00000431149.5
CDS CAA 90 bp GAGCCTTTATTAAGTTTCTCAAAAGGCTCTTCTGGACCTCTGGACTaGATTGAGTACACAGTCTTATTTTTCATAGCAGCCTGTACCTCC +
Preference number: 6 (lower is better)
Translates to: EPLLSFSKGSSGPLD*IEYTVLFFIAACTS
Trigger: GGAGGTACAGGCTGCTATGAAAAATAAGACTGTGTACTCAATCAAGTCCAGAGGTCCAGAAGAGCCTTTTGAGAAACTTAATAAAGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613719.1
CDS CAA 72 bp ACAGCTCTGCAAAAGTTCTTTCTTACGAGTCTCTCCTaGATTGTAGTAATTTCCTGCAGAGAAGCAAAGCAG +
Preference number: 6 (lower is better)
Translates to: TALQKFFLTSLS*IVVISCREAKQ
Trigger: CTGCTTTGCTTCTCTGCAGGAAATTACTACAATCAAGGAGAGACTCGTAAGAAAGAACTTTTGCAGAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000225609.10
ENST00000395844.8
ENST00000470116.2
ENST00000477745.5
ENST00000489009.1
ENST00000498772.6
ENST00000581006.5
ENST00000584797.5
ENST00000607144.4
CDS TCA 72 bp TCTCTTCCCAACTTTTGTGTGATCCAGCAGAGCATGTaGGACTCTTTGATATGCACCTTCATGTATTATCTT +
Preference number: 6 (lower is better)
Translates to: SLPNFCVIQQSM*DSLICTFMYYL
Trigger: AAGATAATACATGAAGGTGCATATCAAAGAGTCTCACATGCTCTGCTGGATCACACAAAAGTTGGGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414755.1
ENST00000431149.5
CDS CAA 72 bp TTAAGTTTCTCAAAAGGCTCTTCTGGACCTCTGGACTaGATTGAGTACACAGTCTTATTTTTCATAGCAGCC +
Preference number: 6 (lower is better)
Translates to: LSFSKGSSGPLD*IEYTVLFFIAA
Trigger: GGCTGCTATGAAAAATAAGACTGTGTACTCAATCAAGTCCAGAGGTCCAGAAGAGCCTTTTGAGAAACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613719.1
CDS TCA 72 bp GATATGCACCTTCATGTATTATCTTGTTCAGTTCTCTaGGGTTGGGATCATTATTATTTCCCATTTTGCAGA +
Preference number: 6 (lower is better)
Translates to: DMHLHVLSCSVL*GWDHYYFPFCR
Trigger: TCTGCAAAATGGGAAATAATAATGATCCCAACCTCAGAGAACTGAACAAGATAATACATGAAGGTGCATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431149.5