Pregenerated sensors for PIGK (Homo sapiens)
Ensembl gene IDs: ENSG00000142892Ensembl transcript IDs: ENST00000359130.1, ENST00000370812.8, ENST00000445065.5, ENST00000478391.1, ENST00000487906.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATAGCTCCGCCTCACCGTGGTGTCCACGACCTTGTATGAGTGTCTaGAGGGCAACATGGTCAATCTTTTTGTGTCTCAGTGCTACTATA | + |
|
Preference number: 1 (lower is better) Translates to: NSSASPWCPRPCMSV*RATWSIFLCLSATI Trigger: TATAGTAGCACTGAGACACAAAAAGATTGACCATGTTGCCCTCCAGACACTCATACAAGGTCGTGGACACCACGGTGAGGCGGAGCTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR CCA 90 bp | AACAATCATAATTCCTTTACCACCCTAAATAGCTCCGCCTCACCGTaGTGTCCACGACCTTGTATGAGTGTCTGGAGGGCAACATGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: NNHNSFTTLNSSASP*CPRPCMSVWRATWS Trigger: TGACCATGTTGCCCTCCAGACACTCATACAAGGTCGTGGACACCACGGTGAGGCGGAGCTATTTAGGGTGGTAAAGGAATTATGATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR CCA 90 bp | CACTCACTGCTCACTCACATACAATTCACTCCCCAAGGCAGTACCTaGTTTACACTTCTCATTCCTTTCCCTAATGTTACCAGGAGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: HSLLTHIQFTPQGST*FTLLIPFPNVTRRP Trigger: AGGCCTCCTGGTAACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAATTGTATGTGAGTGAGCAGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR GCA 90 bp | TGTCTCCCAACTTCCTCTCTCTTACAAATGTCTGTACTCACTCACTaGTCACTCACATACAATTCACTCCCCAAGGCAGTACCTGGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: CLPTSSLLQMSVLTH*SLTYNSLPKAVPGL Trigger: TAAACCAGGTACTGCCTTGGGGAGTGAATTGTATGTGAGTGAGCAGTGAGTGAGTACAGACATTTGTAAGAGAGAGGAAGTTGGGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR CCA 90 bp | TCACCGTGGTGTCCACGACCTTGTATGAGTGTCTGGAGGGCAACATaGTCAATCTTTTTGTGTCTCAGTGCTACTATAATCAGTCTATTC | + |
|
Preference number: 1 (lower is better) Translates to: SPWCPRPCMSVWRAT*SIFLCLSATIISLF Trigger: GAATAGACTGATTATAGTAGCACTGAGACACAAAAAGATTGACCATGTTGCCCTCCAGACACTCATACAAGGTCGTGGACACCACGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR TCA 90 bp | GAAGAGGACGTGACCAATTGTAGAAGATCACAGAACGCTTACAAATaGAAAACAATGGGGTATGTTTCTCTTGAGCAGTCAGTACGTGAA | + |
|
Preference number: 1 (lower is better) Translates to: EEDVTNCRRSQNAYK*KTMGYVSLEQSVRE Trigger: TTCACGTACTGACTGCTCAAGAGAAACATACCCCATTGTTTTTCATTTGTAAGCGTTCTGTGATCTTCTACAATTGGTCACGTCCTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR TCA 90 bp | TTTCCCAGTTTGGTTTTAACTAAGAAGGGCACCTTCTACAACCTCTaGAGACGAATCCTTTTACTTTCTAGCAGTCTTTACAGGGTATGT | + |
|
Preference number: 1 (lower is better) Translates to: FPSLVLTKKGTFYNL*RRILLLSSSLYRVC Trigger: ACATACCCTGTAAAGACTGCTAGAAAGTAAAAGGATTCGTCTTCAGAGGTTGTAGAAGGTGCCCTTCTTAGTTAAAACCAAACTGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR TCA 90 bp | ACACTTCCAAAGAAATCAGTTATCAGTACATTTTTAGGATCCCTCTaGAAAAGATCAGTGCGATGTCCAGGAGTAGACACACACAGACTT | + |
|
Preference number: 1 (lower is better) Translates to: TLPKKSVISTFLGSL*KRSVRCPGVDTHRL Trigger: AAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTTCAGAGGGATCCTAAAAATGTACTGATAACTGATTTCTTTGGAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR CAA 90 bp | CCAGTGGGCAAGGAGGTTTACCTAAAACAGAATGAAATAAAGTCCTaGTTGGCTCTCTCTTTCAAGATGGAAAATGAAGAGGACGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: PVGKEVYLKQNEIKS*LALSFKMENEEDVT Trigger: GGTCACGTCCTCTTCATTTTCCATCTTGAAAGAGAGAGCCAACAAGGACTTTATTTCATTCTGTTTTAGGTAAACCTCCTTGCCCACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTTGGGACATACCTGAAAAAGGTCATTCATATTAGTTTGGCTAGCTGGGTTAGGTTGATGCGAGAGTaGATCTTCTCCCACTTGACT | + |
|
Preference number: 2 (lower is better) Translates to: TFGTYLKKVIHISLASWVRLMRE*IFSHLT Trigger: AGTCAAGTGGGAGAAGATTCACTCTCGCATCAACCT...AACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCAAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGATCAGTGCGATGTCCAGGAGTAGACACACACAGACTTTTGGGACATACGTTTGCAGTCCTCCATaGATTCTTCATTCATCATCA | + |
|
Preference number: 2 (lower is better) Translates to: KKISAMSRSRHTQTFGTYVCSPP*ILHSSS Trigger: TGATGATGAATGAAGAATGCATGGAGGACTGCAAAC...GTATGTCCCAAAAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTACCAGGAAGCAAGATTGTCTTTTaGAGCTCCAACATAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PKAVPGLHFSFLSLMLPGSKIVF*SSNIIL Trigger: TAGGATTATGTTGGAGCTCCAAAAGACAATCTTGCT...TCCTGGTAACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR-3UTR CCA 90 bp | AGTGAACCAATGTCTCCCAACTTCCTCTCTCTTACAAATGTCTGTACTCACTCAAGAAAATTATGGCGCTaGGATAGCCAGTTATGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SEPMSPNFLSLTNVCTHSRKLWR*DSQLWE Trigger: TTCCCATAACTGGCTATCCCAGCGCCATAATTTTCT...TGAGTGAGTACAGACATTTGTAAGAGAGAGGAAGTTGGGAGACATTGGTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR CAA 90 bp | GTGGGCAAGGAGGTTTACCTAAAACAGAATGAAATAAAGTCCTTGTaGGCTCTCTCTTTCAAGATGGAAAATGAAGAGGACGTGACCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VGKEVYLKQNEIKSL*ALSFKMENEEDVTN Trigger: ATTGGTCACGTCCTCTTCATTTTCCATCTTGAAAGAGAGAGCCAACAAGGACTTTATTTCATTCTGTTTTAGGTAAACCTCCTTGCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTTGGGACATACCTGAAAAAGGTCATTCATATTAGTTTGGCTAGCTGGGTTGAATCTTCTCCCACTTaGCTACTAGCTAGAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: TFGTYLKKVIHISLASWVESSPT*LLARAI Trigger: AATGGCTCTAGCTAGTAGTCAAGTGGGAGAAGATTC...AACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCAAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCTGGTGTATTATCTGAGCTACAGGAAGTTGTTCAGCATATTTCAGAGGTTATTGCAGGATCAGGTTaGTGCGAGAGTGAATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VSGVLSELQEVVQHISEVIAGSG*CESESS Trigger: AGAAGATTCACTCTCGCATCAACCTGATCCTGCAAT...AACCTCTGAAATATGCTGAACAACTTCCTGTAGCTCAGATAATACACCAGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTTGGGACATACCTGAAAAAGGTCATTCATATTAGTTTGGCTAGCTGGGTTTCGTTCATACATGGATaGTCCTTGGCAAGTATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TFGTYLKKVIHISLASWVSFIHG*SLASIN Trigger: ATTGATACTTGCCAAGGAGCATCCATGTATGAACGA...AACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCAAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTTGGGACATACCTGAAAAAGGTCATTCATATTAGTTTGGCTAGCTGGGTTAAAATCGTTCATACATaGATGCTCCTTGGCAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: TFGTYLKKVIHISLASWVKIVHT*MLLGKY Trigger: ATACTTGCCAAGGAGCATCCATGTATGAACGATTTT...AACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTATTATCTGAGCTACAGGAAGTTGTTCAGCATATTTCAGAGGTTCCATTATATCTATCCATAAGATaGACTCCAATTGCAGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: GVLSELQEVVQHISEVPLYLSIR*TPIAGS Trigger: TGATCCTGCAATTGGAGTCCATCTTATGGATAGATA...TAATGGAACCTCTGAAATATGCTGAACAACTTCCTGTAGCTCAGATAATACACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTTTTGGGACATACCTGAAAAAGGTCATTCATATTAGTTTGGCTAGCTGGGTTATTATTATCCAAGTTTaGAGTCCTCCATGCATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TFGTYLKKVIHISLASWVIIIQV*SPPCIL Trigger: AAGAATGCATGGAGGACTGCAAACTTGGATAATAAT...AACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCAAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR CCA 72 bp | AATTCCTTTACCACCCTAAATAGCTCCGCCTCACCGTaGTGTCCACGACCTTGTATGAGTGTCTGGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: NSFTTLNSSASP*CPRPCMSVWRA Trigger: TGCCCTCCAGACACTCATACAAGGTCGTGGACACCACGGTGAGGCGGAGCTATTTAGGGTGGTAAAGGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR TCA 72 bp | ATAGCTCCGCCTCACCGTGGTGTCCACGACCTTGTATaGGTGTCTGGAGGGCAACATGGTCAATCTTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IAPPHRGVHDLV*VSGGQHGQSFC Trigger: ACAAAAAGATTGACCATGTTGCCCTCCAGACACTCATACAAGGTCGTGGACACCACGGTGAGGCGGAGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR CCA 72 bp | GCCTCACCGTGGTGTCCACGACCTTGTATGAGTGTCTaGAGGGCAACATGGTCAATCTTTTTGTGTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASPWCPRPCMSV*RATWSIFLCLS Trigger: ACTGAGACACAAAAAGATTGACCATGTTGCCCTCCAGACACTCATACAAGGTCGTGGACACCACGGTGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCCATAATCCCAGAATAAAGCCCCCAGGAGGATGCCAGTCTTTCAGCTTCGGTCTGAGCTACAGGAAGTaGTTCAGCATATTTCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AHNPRIKPPGGCQSFSFGLSYRK*FSIFQR Trigger: CCTCTGAAATATGCTGAACAACTTCCTGTAGCTCAG...ACCGAAGCTGAAAGACTGGCATCCTCCTGGGGGCTTTATTCTGGGATTATGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR GCA 72 bp | AGTGCCCATAATCCCAGAATAAAGCCCCCAGGAGGATaGCAGTCTTTCAGCTTCGGTTTCTGGTGTATTATC | + |
|
Preference number: 3 (lower is better) Translates to: SAHNPRIKPPGG*QSFSFGFWCII Trigger: GATAATACACCAGAAACCGAAGCTGAAAGACTGGCATCCTCCTGGGGGCTTTATTCTGGGATTATGGGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCCCATAATCCCAGAATAAAGCCCCCAGGAGGATGCCAGTCTTTCAGCTTCGTCATTCATATTAGTTaGGCTAGCTGGGTTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SAHNPRIKPPGGCQSFSFVIHIS*ASWVNF Trigger: GAAATTAACCCAGCTAGCCAAACTAATATGAATGAC...GAAGCTGAAAGACTGGCATCCTCCTGGGGGCTTTATTCTGGGATTATGGGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTCCCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTGAACCACTAGCAAGATaGTCTTTTGGAGCTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: FTPQGSTWFTLLIPFPNVEPLAR*SFGAPT Trigger: TGTTGGAGCTCCAAAAGACAATCTTGCTAGTGGTTC...AACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGATCAGTGCGATGTCCAGGAGTAGACACACACAGACTTTTGGGACATACTCTTTTCTGCCACATTaGTTCAAAAGCATCCGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: KKISAMSRSRHTQTFGTYSFLPH*FKSIRE Trigger: CTCGCGGATGCTTTTGAACAAATGTGGCAGAAAAGA...GTATGTCCCAAAAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR CCA 72 bp | CTCACTCACATACAATTCACTCCCCAAGGCAGTACCTaGTTTACACTTCTCATTCCTTTCCCTAATGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: LTHIQFTPQGST*FTLLIPFPNVT Trigger: GGTAACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAATTGTATGTGAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR CCA 72 bp | TGTCCACGACCTTGTATGAGTGTCTGGAGGGCAACATaGTCAATCTTTTTGTGTCTCAGTGCTACTATAATC | + |
|
Preference number: 3 (lower is better) Translates to: CPRPCMSVWRAT*SIFLCLSATII Trigger: GATTATAGTAGCACTGAGACACAAAAAGATTGACCATGTTGCCCTCCAGACACTCATACAAGGTCGTGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAAAGATCAGTGCGATGTCCAGGAGTAGACACACACAGACTTTTGGGACATACAATTATTATCCAAGTTaGCAGTCCTCCATGCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: KKISAMSRSRHTQTFGTYNYYPS*QSSMHS Trigger: AGAATGCATGGAGGACTGCAAACTTGGATAATAATT...GTATGTCCCAAAAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR TCA 72 bp | TGGCTCTCTCTTTCAAGATGGAAAATGAAGAGGACGTaGCCAATTGTAGAAGATCACAGAACGCTTACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: WLSLSRWKMKRT*PIVEDHRTLTN Trigger: ATTTGTAAGCGTTCTGTGATCTTCTACAATTGGTCACGTCCTCTTCATTTTCCATCTTGAAAGAGAGAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR TCA 72 bp | TTGGTTTTAACTAAGAAGGGCACCTTCTACAACCTCTaGAGACGAATCCTTTTACTTTCTAGCAGTCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LVLTKKGTFYNL*RRILLLSSSLY Trigger: GTAAAGACTGCTAGAAAGTAAAAGGATTCGTCTTCAGAGGTTGTAGAAGGTGCCCTTCTTAGTTAAAACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| 3UTR TCA 72 bp | AAGAAATCAGTTATCAGTACATTTTTAGGATCCCTCTaGAAAAGATCAGTGCGATGTCCAGGAGTAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: KKSVISTFLGSL*KRSVRCPGVDT Trigger: TGTGTCTACTCCTGGACATCGCACTGATCTTTTTCAGAGGGATCCTAAAAATGTACTGATAACTGATTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTCTCTGTTGTAATTTCCACTTTCCGTACACTTCCAAAGAAATCAGTTATCTCCGCGAGTTCTATGTaGGTAATTTCTTCAGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: IVSVVISTFRTLPKKSVISASSM*VISSES Trigger: AGATTCTGAAGAAATTACCAACATAGAACTCGCGGA...GATAACTGATTTCTTTGGAAGTGTACGGAAAGTGGAAATTACAACAGAGACTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| 3UTR TCA 72 bp | CATCTGGTCTTCCTTATAGCTGCTTTCCATGATTTCTaGATCCTGTTGCAATTTAATAGTCTCTGTTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HLVFLIAAFHDF*ILLQFNSLCCN Trigger: ATTACAACAGAGACTATTAAATTGCAACAGGATTCAGAAATCATGGAAAGCAGCTATAAGGAAGACCAGATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR TCA 90 bp | AGTGCCCATAATCCCAGAATAAAGCCCCCAGGAGGATGCCAGTCTTTCAGCTTCATTGCAGGATCAGGTTaGTGCGAGAGTGAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAHNPRIKPPGGCQSFSFIAGSG*CESESS Trigger: AGAAGATTCACTCTCGCATCAACCTGATCCTGCAAT...GAAGCTGAAAGACTGGCATCCTCCTGGGGGCTTTATTCTGGGATTATGGGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR GCA 90 bp | AAAAAGATCAGTGCGATGTCCAGGAGTAGACACACACAGACTTTTGGGACATACAAGCCCCCAGGAGGATaGCAGTCTTTCAGCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKISAMSRSRHTQTFGTYKPPGG*QSFSFG Trigger: ACCGAAGCTGAAAGACTGGCATCCTCCTGGGGGCTT...GTATGTCCCAAAAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR TCA 90 bp | CCTTTCCCTAATGTTACCAGGAGGCCTAACAGAAAATTATGGCGCTGGGATAGCAGAAAGAAGACGTTTTaGCCGAGGAGTACTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFPNVTRRPNRKLWRWDSRKKTF*PRSTRW Trigger: CCACCTAGTACTCCTCGGTCAAAACGTCTTCTTTCT...GCTATCCCAGCGCCATAATTTTCTGTTAGGCCTCCTGGTAACATTAGGGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR GCA 90 bp | GGAAAAGTTTTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGCAAGAGCAACACAGTTaGCAAGACAGTCGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKVLGLCGKYQTEPLARLQEQHS*QDSRSP Trigger: CGGGCTGCGACTGTCTTGGCAACTGTGTTGCTCTTG...CAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAAAACTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR GCA 90 bp | CACTCACTGCTCACTCACATACAATTCACTCCCCAAGGCAGTACCTGGTTTACAAAGATGGACTCCAATTaGAGGATCAGGTTGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSLLTHIQFTPQGSTWFTKMDSN*RIRLMR Trigger: TCGCATCAACCTGATCCTGCAATTGGAGTCCATCTT...TGTAAACCAGGTACTGCCTTGGGGAGTGAATTGTATGTGAGTGAGCAGTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTACCAGGAGAATCTTCTCCCACTTaGCTACTAGCTAGAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PKAVPGLHFSFLSLMLPGESSPT*LLARAI Trigger: AATGGCTCTAGCTAGTAGTCAAGTGGGAGAAGATTC...TCCTGGTAACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | TGTACTCACTCACTGCTCACTCACATACAATTCACTCCCCAAGGCAGTACCTGGAATACCTGCTTTCCATaGTTTCTGAATCCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTHSLLTHIQFTPQGSTWNTCFP*FLNPVA Trigger: TGCAACAGGATTCAGAAATCATGGAAAGCAGGTATT...CCAGGTACTGCCTTGGGGAGTGAATTGTATGTGAGTGAGCAGTGAGTGAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR GCA 90 bp | TGTACTCACTCACTGCTCACTCACATACAATTCACTCCCCAAGGCAGTACCTGGTCGTTCATACATGGATaGTCCTTGGCAAGTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CTHSLLTHIQFTPQGSTWSFIHG*SLASIN Trigger: ATTGATACTTGCCAAGGAGCATCCATGTATGAACGA...CCAGGTACTGCCTTGGGGAGTGAATTGTATGTGAGTGAGCAGTGAGTGAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CCA 90 bp | AGTGAACCAATGTCTCCCAACTTCCTCTCTCTTACAAATGTCTGTACTCACTCACCCCAAGGCAGTACCTaGTTTACACTTCTCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEPMSPNFLSLTNVCTHSPQGST*FTLLIP Trigger: AGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGG...TGAGTGAGTACAGACATTTGTAAGAGAGAGGAAGTTGGGAGACATTGGTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | AGTGAACCAATGTCTCCCAACTTCCTCTCTCTTACAAATGTCTGTACTCACTCAAGCATTAGGACAATGTaGCTGTCAGGAATACCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEPMSPNFLSLTNVCTHSSIRTM*LSGIPS Trigger: GCTAGGTATTCCTGACAGTCACATTGTCCTAATGCT...TGAGTGAGTACAGACATTTGTAAGAGAGAGGAAGTTGGGAGACATTGGTTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | GGAAAAGTTTTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGAGGTTGATGCGAGAGTaGATCTTCTCCCACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GKVLGLCGKYQTEPLARLRLMRE*IFSHLT Trigger: AGTCAAGTGGGAGAAGATTCACTCTCGCATCAACCT...CAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAAAACTTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | TTCACTCCCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTTTCACATACCCAAAGTaGACCAATGTCTCCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FTPQGSTWFTLLIPFPNVFTYPK*TNVSQL Trigger: AAGTTGGGAGACATTGGTTCACTTTGGGTATGTGAA...AACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CCA 90 bp | TTCACTCCCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTCCTAACAGAAAATTATaGCGCTGGGATAGCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FTPQGSTWFTLLIPFPNVPNRKL*RWDSQL Trigger: TAACTGGCTATCCCAGCGCCATAATTTTCTGTTAGG...AACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCACATTTGTTCAAAAGCATCCGCGAGTTCTATGTTGGTAATTTCTTCAAGGTTGATGCGAGAGTaGATCTTCTCCCACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FCHICSKASASSMLVISSRLMRE*IFSHLT Trigger: AGTCAAGTGGGAGAAGATTCACTCTCGCATCAACCT...TGAAGAAATTACCAACATAGAACTCGCGGATGCTTTTGAACAAATGTGGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR TCA 90 bp | AAAGTGAACCAATGTCTCCCAACTTCCTCTCTCTTACAAATGTCTGTACTCACTATTGCAGGATCAGGTTaGTGCGAGAGTGAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVNQCLPTSSLLQMSVLTIAGSG*CESESS Trigger: AGAAGATTCACTCTCGCATCAACCTGATCCTGCAAT...AGTGAGTACAGACATTTGTAAGAGAGAGGAAGTTGGGAGACATTGGTTCACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | AAAAAGATCAGTGCGATGTCCAGGAGTAGACACACACAGACTTTTGGGACATACTTTTTAGGATCCCTCTaGAAAAGATCAGTGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KKISAMSRSRHTQTFGTYFLGSL*KRSVRC Trigger: ACATCGCACTGATCTTTTTCAGAGGGATCCTAAAAA...GTATGTCCCAAAAGTCTGTGTGTGTCTACTCCTGGACATCGCACTGATCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR GCA 90 bp | CCTTTCCCTAATGTTACCAGGAGGCCTAACAGAAAATTATGGCGCTGGGATAGCTCTAAAGAATTGTTCTaGTTGATCCTCGATATGACT | + |
|
Preference number: 4 (lower is better) Translates to: PFPNVTRRPNRKLWRWDSSKELF*LILDMT Trigger: AGTCATATCGAGGATCAAGCAGAACAATTCTTTAGA...GCTATCCCAGCGCCATAATTTTCTGTTAGGCCTCCTGGTAACATTAGGGAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR TCA 90 bp | AGTGAACCAATGTCTCCCAACTTCCTCTCTCTTACAAATGTCTGTACTCACTCAAGTTCCATATTCTTGTaGCTAAACACTGTAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEPMSPNFLSLTNVCTHSSSIFL*LNTVAG Trigger: ACCAGCTACAGTGTTTAGTCACAAGAATATGGAACT...TGAGTGAGTACAGACATTTGTAAGAGAGAGGAAGTTGGGAGACATTGGTTCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CCA 90 bp | TTCACTCCCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTACTAAACACTGTAGCTaGTTTGGGATTTCTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FTPQGSTWFTLLIPFPNVTKHCS*FGISRI Trigger: AATCCTAGAAATCCCAAACCAGCTACAGTGTTTAGT...AACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTACCAGGATACATGGATGCTCCTTaGCAAGTATCAATAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKAVPGLHFSFLSLMLPGYMDAP*QVSIIN Trigger: GTTTATTATTGATACTTGCCAAGGAGCATCCATGTA...TCCTGGTAACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CCA 90 bp | TTCACTCCCCAAGGCAGTACCTGGTTTACACTTCTCATTCCTTTCCCTAATGTTTATCTATCCATAAGATaGACTCCAATTGCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FTPQGSTWFTLLIPFPNVYLSIR*TPIAGS Trigger: TGATCCTGCAATTGGAGTCCATCTTATGGATAGATA...AACATTAGGGAAAGGAATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR GCA 90 bp | TTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGTCTTTTGGATCTGTACTCACTCACTaGTCACTCACATACAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLCGKYQTEPLARLSFGSVLTH*SLTYNS Trigger: TGAATTGTATGTGAGTGAGCAGTGAGTGAGTACAGA...TCCAAAAGACAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CCA 90 bp | GCGTCTTTTCTGCCACATTTGTTCAAAAGCATCCGCGAGTTCTATGTTGGTAATTATCTATCCATAAGATaGACTCCAATTGCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASFLPHLFKSIREFYVGNYLSIR*TPIAGS Trigger: TGATCCTGCAATTGGAGTCCATCTTATGGATAGATA...ATTACCAACATAGAACTCGCGGATGCTTTTGAACAAATGTGGCAGAAAAGACGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR TCA 90 bp | TTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGTCTTTTGGAGAATACCTAGCCTCTTaGCACTTCTATAAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLCGKYQTEPLARLSFGEYLAS*HFYKQK Trigger: TTTCTGTTTATAGAAGTGTCAAGAGGCTAGGTATTC...TCCAAAAGACAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR GCA 90 bp | GTTTCTGGTGTATTATCTGAGCTACAGGAAGTTGTTCAGCATATTTCAGAGGTTGTTTGCAGTCCTCCATaGATTCTTCATTCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VSGVLSELQEVVQHISEVVCSPP*ILHSSS Trigger: TGATGATGAATGAAGAATGCATGGAGGACTGCAAAC...AACCTCTGAAATATGCTGAACAACTTCCTGTAGCTCAGATAATACACCAGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR CCA 90 bp | TTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGTCTTTTGGAAGCAAGATTGTCTTTTaGAGCTCCAACATAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LGLCGKYQTEPLARLSFGSKIVF*SSNIIL Trigger: TAGGATTATGTTGGAGCTCCAAAAGACAATCTTGCT...TCCAAAAGACAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR CAA 72 bp | ATACTCAGTAAGCAGAAACAAGCTGAGTTATGCTTCTaGTGGGAATCATCATTTTCAACTAGCTGGGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ILSKQKQAELCF*WESSFSTSWEY Trigger: ATATTCCCAGCTAGTTGAAAATGATGATTCCCACAAGAAGCATAACTCAGCTTGTTTCTGCTTACTGAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| CDS-3UTR TCA 90 bp | GTCTTTTGGAGCTCCAACATAATCCTAACGATGATCTTAGTTTCCACTAATATTTTTTTAGGATCCCTCTaGAAAAGATCAGTGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VFWSSNIILTMILVSTNIFLGSL*KRSVRC Trigger: ACATCGCACTGATCTTTTTCAGAGGGATCCTAAAAA...AATATTAGTGGAAACTAAGATCATCGTTAGGATTATGTTGGAGCTCCAAAAGAC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR GCA 90 bp | ATAGTCTCTGTTGTAATTTCCACTTTCCGTACACTTCCAAAGAAATCAGTTATCTCGTTCATACATGGATaGTCCTTGGCAAGTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IVSVVISTFRTLPKKSVISFIHG*SLASIN Trigger: ATTGATACTTGCCAAGGAGCATCCATGTATGAACGA...GATAACTGATTTCTTTGGAAGTGTACGGAAAGTGGAAATTACAACAGAGACTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCACATTTGTTCAAAAGCATCCGCGAGTTCTATGTTGGTAATTTCTTCAATTATTATCCAAGTTTaGAGTCCTCCATGCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCHICSKASASSMLVISSIIIQV*SPPCIL Trigger: AAGAATGCATGGAGGACTGCAAACTTGGATAATAAT...TGAAGAAATTACCAACATAGAACTCGCGGATGCTTTTGAACAAATGTGGCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTTGGGACATACCTGAAAAAGGTCATTCATATTAGTTTGGCTAGCTGGGTTTACATGGATGCTCCTTaGCAAGTATCAATAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFGTYLKKVIHISLASWVYMDAP*QVSIIN Trigger: GTTTATTATTGATACTTGCCAAGGAGCATCCATGTA...AACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCAAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTGGAGCTCCAACATAATCCTAACGATGATCTTAGTTTCCACTAATATTAAAATCGTTCATACATaGATGCTCCTTGGCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VFWSSNIILTMILVSTNIKIVHT*MLLGKY Trigger: ATACTTGCCAAGGAGCATCCATGTATGAACGATTTT...AATATTAGTGGAAACTAAGATCATCGTTAGGATTATGTTGGAGCTCCAAAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| 3UTR CAA 72 bp | AAGGAGGTTTACCTAAAACAGAATGAAATAAAGTCCTaGTTGGCTCTCTCTTTCAAGATGGAAAATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEVYLKQNEIKS*LALSFKMENEE Trigger: CTCTTCATTTTCCATCTTGAAAGAGAGAGCCAACAAGGACTTTATTTCATTCTGTTTTAGGTAAACCTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370812.8 ENST00000445065.5 |
||
| CDS GCA 90 bp | GATATGACTAGCGGCCACGCTGCCGAAGGACAAGAGCAACACAGTTaGCAAGACAGTCGCAGCCCGGCTGAGGCTGTCGGTGACGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DMTSGHAAEGQEQHS*QDSRSPAEAVGDGH Trigger: ATGGCCGTCACCGACAGCCTCAGCCGGGCTGCGACTGTCTTGGCAACTGTGTTGCTCTTGTCCTTCGGCAGCGTGGCCGCTAGTCATATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000359130.1 ENST00000370812.8 ENST00000445065.5 ENST00000478391.1 |
||
| CDS-3UTR CAA 90 bp | AGTGCCCATAATCCCAGAATAAAGCCCCCAGGAGGATGCCAGTCTTTCAGCTTCTCTTTTCTGCCACATTaGTTCAAAAGCATCCGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAHNPRIKPPGGCQSFSFSFLPH*FKSIRE Trigger: CTCGCGGATGCTTTTGAACAAATGTGGCAGAAAAGA...GAAGCTGAAAGACTGGCATCCTCCTGGGGGCTTTATTCTGGGATTATGGGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR CAA 90 bp | TTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGTCTTTTGGAACAAGAGCAACACAGTaGCCAAGACAGTCGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLCGKYQTEPLARLSFGTRATQ*PRQSQP Trigger: GGGCTGCGACTGTCTTGGCAACTGTGTTGCTCTTGT...TCCAAAAGACAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CAA 90 bp | CCTTTCCCTAATGTTACCAGGAGGCCTAACAGAAAATTATGGCGCTGGGATAGCTCTTTTCTGCCACATTaGTTCAAAAGCATCCGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFPNVTRRPNRKLWRWDSSFLPH*FKSIRE Trigger: CTCGCGGATGCTTTTGAACAAATGTGGCAGAAAAGA...GCTATCCCAGCGCCATAATTTTCTGTTAGGCCTCCTGGTAACATTAGGGAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CAA 90 bp | AGTGCCCATAATCCCAGAATAAAGCCCCCAGGAGGATGCCAGTCTTTCAGCTTCAATTATTATCCAAGTTaGCAGTCCTCCATGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAHNPRIKPPGGCQSFSFNYYPS*QSSMHS Trigger: AGAATGCATGGAGGACTGCAAACTTGGATAATAATT...GAAGCTGAAAGACTGGCATCCTCCTGGGGGCTTTATTCTGGGATTATGGGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTCCCTAATGTTACCAGGAGGCCTAACAGAAAATTATGGCGCTGGGATAGCAAAGAATTGTTCTGCTaGATCCTCGATATGACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFPNVTRRPNRKLWRWDSKELFC*ILDMTS Trigger: GCTAGTCATATCGAGGATCAAGCAGAACAATTCTTT...GCTATCCCAGCGCCATAATTTTCTGTTAGGCCTCCTGGTAACATTAGGGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CAA 90 bp | CCTTTCCCTAATGTTACCAGGAGGCCTAACAGAAAATTATGGCGCTGGGATAGCTCCGCGAGTTCTATGTaGGTAATTTCTTCAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PFPNVTRRPNRKLWRWDSSASSM*VISSES Trigger: AGATTCTGAAGAAATTACCAACATAGAACTCGCGGA...GCTATCCCAGCGCCATAATTTTCTGTTAGGCCTCCTGGTAACATTAGGGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CAA 90 bp | CTCACTCACATACAATTCACTCCCCAAGGCAGTACCTGGTTTACACTTCTCATTGCCACTTCTAAAGAATaGTTCTGCTTGATCCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTHIQFTPQGSTWFTLLIATSKE*FCLILD Trigger: ATCGAGGATCAAGCAGAACAATTCTTTAGAAGTGGC...AATGAGAAGTGTAAACCAGGTACTGCCTTGGGGAGTGAATTGTATGTGAGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CAA 90 bp | TTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGTCTTTTGGAGAACCACTAGCAAGATaGTCTTTTGGAGCTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LGLCGKYQTEPLARLSFGEPLAR*SFGAPT Trigger: TGTTGGAGCTCCAAAAGACAATCTTGCTAGTGGTTC...TCCAAAAGACAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CAA 90 bp | GGTGTATTATCTGAGCTACAGGAAGTTGTTCAGCATATTTCAGAGGTTCCATTACTGAGCTACAGGAAGTaGTTCAGCATATTTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVLSELQEVVQHISEVPLLSYRK*FSIFQR Trigger: CCTCTGAAATATGCTGAACAACTTCCTGTAGCTCAG...TAATGGAACCTCTGAAATATGCTGAACAACTTCCTGTAGCTCAGATAATACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS TCA 90 bp | CTGCAAGCATTAGGACAATGTGACTGTCAGGAATACCTAGCCTCTTaGCACTTCTATAAACAGAAAGGGTATTTGCAACATGTCGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQALGQCDCQEYLAS*HFYKQKGYLQHVDN Trigger: ATTATCGACATGTTGCAAATACCCTTTCTGTTTATAGAAGTGTCAAGAGGCTAGGTATTCCTGACAGTCACATTGTCCTAATGCTTGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359130.1 ENST00000370812.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAAGTTTTAGGCCTTTGTGGCAAGTATCAAACTGAACCACTAGCAAGATTGGTCATTCATATTAGTTaGGCTAGCTGGGTTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GKVLGLCGKYQTEPLARLVIHIS*ASWVNF Trigger: GAAATTAACCCAGCTAGCCAAACTAATATGAATGAC...CAATCTTGCTAGTGGTTCAGTTTGATACTTGCCACAAAGGCCTAAAACTTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359130.1 |
||
| CDS-3UTR CAA 90 bp | GGTGTATTATCTGAGCTACAGGAAGTTGTTCAGCATATTTCAGAGGTTCCATTAGTCATTCATATTAGTTaGGCTAGCTGGGTTAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVLSELQEVVQHISEVPLVIHIS*ASWVNF Trigger: GAAATTAACCCAGCTAGCCAAACTAATATGAATGAC...TAATGGAACCTCTGAAATATGCTGAACAACTTCCTGTAGCTCAGATAATACACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487906.5 |
||
| CDS GCA 72 bp | AGCGGCCACGCTGCCGAAGGACAAGAGCAACACAGTTaGCAAGACAGTCGCAGCCCGGCTGAGGCTGTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGHAAEGQEQHS*QDSRSPAEAVG Trigger: ACCGACAGCCTCAGCCGGGCTGCGACTGTCTTGGCAACTGTGTTGCTCTTGTCCTTCGGCAGCGTGGCCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000359130.1 ENST00000370812.8 ENST00000445065.5 ENST00000478391.1 |
||
| CDS CAA 72 bp | AACAGCCCAGTTGTTTGTATGGCCACTTCTAAAGAATaGTTCTGCTTGATCCTCGATATGACTAGCGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: NSPVVCMATSKE*FCLILDMTSGH Trigger: GTGGCCGCTAGTCATATCGAGGATCAAGCAGAACAATTCTTTAGAAGTGGCCATACAAACAACTGGGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000359130.1 ENST00000370812.8 ENST00000478391.1 |
||