Pregenerated sensors for PIGC (Homo sapiens)
Ensembl gene IDs: ENSG00000135845Ensembl transcript IDs: ENST00000344529.5, ENST00000367728.1, ENST00000475059.5, ENST00000478184.1, ENST00000484368.1, ENST00000489002.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCACAACAAATATTGCTTGGCAAGCCAGACACCGTTACCCCCTCTaGAGCAGGGATCCCAGCCCGGGAATCTTAAGGCCGCCGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: TTTNIAWQARHRYPL*SRDPSPGILRPPPG Trigger: CCCCGGCGGCGGCCTTAAGATTCCCGGGCTGGGATCCCTGCTGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATTTGTTGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CCA 90 bp | GGCGAGGCCCAGAAACAGAAAGCAAGTCTTGTGAAAGTCAGAATCTaGGAGCTTTGCAGATGCGTCAAGGTAGCCTTCAGATTGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GEAQKQKASLVKVRI*ELCRCVKVAFRLPL Trigger: GAGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGACTTTCACAAGACTTGCTTTCTGTTTCTGGGCCTCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS TCA 90 bp | TTGAGTCTACCTTACACAAACATCTCCATCCTGCCACGGTTCGGATaGCTGGCAGTCTGTTTAGGCGAGGCCCAGAAACAGAAAGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LSLPYTNISILPRFG*LAVCLGEAQKQKAS Trigger: ACTTGCTTTCTGTTTCTGGGCCTCGCCTAAACAGACTGCCAGTCATCCGAACCGTGGCAGGATGGAGATGTTTGTGTAAGGTAGACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS TCA 90 bp | CTTACGTCAAGGTTTGGTGCCATGAAGGATGAAGCTGCTGAGCCCTaGAGTCGTGGGCTAAGGGTACACGGACAATTAAGCAACTTAAGT | + |
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Preference number: 5 (lower is better) Translates to: LTSRFGAMKDEAAEP*SRGLRVHGQLSNLS Trigger: ACTTAAGTTGCTTAATTGTCCGTGTACCCTTAGCCCACGACTTCAGGGCTCAGCAGCTTCATCCTTCATGGCACCAAACCTTGACGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS GCA 90 bp | ATATTGCCCGACTTTATTTCTTCCATGATAGACCACAACAAATATTaGTTGGCAAGCCAGACACCGTTACCCCCTCTGCAGCAGGGATCC | + |
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Preference number: 5 (lower is better) Translates to: ILPDFISSMIDHNKY*LASQTPLPPLQQGS Trigger: GGATCCCTGCTGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATTTGTTGTGGTCTATCATGGAAGAAATAAAGTCGGGCAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CCA 90 bp | GGCTGGGTTTGGCCTTCTTCTACTCATCTCTATCATCCTTCAGTGTaGACAGCCAAAAGACAGAGGGAAACTGTTACTGTCACCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: GWVWPSSTHLYHPSV*TAKRQRETVTVTST Trigger: AGTACTGGTGACAGTAACAGTTTCCCTCTGTCTTTTGGCTGTCCACACTGAAGGATGATAGAGATGAGTAGAAGAAGGCCAAACCCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475059.5 |
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| CDS GCA 90 bp | CAGAAAGCAAGTCTTGTGAAAGTCAGAATCTGGGAGCTTTGCAGATaGGTCAAGGTAGCCTTCAGATTGCCTCTCTGTTTTCAATGTGTC | + |
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Preference number: 5 (lower is better) Translates to: QKASLVKVRIWELCR*VKVAFRLPLCFQCV Trigger: GACACATTGAAAACAGAGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGACTTTCACAAGACTTGCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS GCA 90 bp | CAGAAACAGAAAGCAAGTCTTGTGAAAGTCAGAATCTGGGAGCTTTaGAGATGCGTCAAGGTAGCCTTCAGATTGCCTCTCTGTTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: QKQKASLVKVRIWEL*RCVKVAFRLPLCFQ Trigger: TTGAAAACAGAGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGACTTTCACAAGACTTGCTTTCTGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS TCA 90 bp | AGCCAAGTTCCTAGAAAAAGAGAGACTGTGAACCTACGAAAGTTGTaGAAGGTCAAGAGTAGTACTGAGATAAAGTCAAATCAACTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SQVPRKRETVNLRKL*KVKSSTEIKSNQLS Trigger: ACTGAGTTGATTTGACTTTATCTCAGTACTACTCTTGACCTTTCACAACTTTCGTAGGTTCACAGTCTCTCTTTTTCTAGGAACTTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CCA 90 bp | CTGTGTCTCACATTGTATCTCCCTCTAAAGCAGTTCTTAACTCAGTaGTTCACATATCCCTTAGGTATATCACATTGCATGCTTATATCT | + |
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Preference number: 5 (lower is better) Translates to: LCLTLYLPLKQFLTQ*FTYPLGISHCMLIS Trigger: AGATATAAGCATGCAATGTGATATACCTAAGGGATATGTGAACCACTGAGTTAAGAACTGCTTTAGAGGGAGATACAATGTGAGACACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 90 bp | TGCAGCAGGGATCCCAGCCCGGGAATCTTAAGGCCGCCGCCGGGGTaGGAGGGTCTGCGACGCCCAAAAGGGCAGCGCCCGCCCGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CSRDPSPGILRPPPG*EGLRRPKGQRPPAE Trigger: CTCTGCGGGCGGGCGCTGCCCTTTTGGGCGTCGCAGACCCTCCAACCCCGGCGGCGGCCTTAAGATTCCCGGGCTGGGATCCCTGCTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367728.1 ENST00000478184.1 |
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| CDS CAA 72 bp | GATCCCAGCCCGGGAATCTTAAGGCCGCCGCCGGGGTaGGAGGGTCTGCGACGCCCAAAAGGGCAGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: DPSPGILRPPPG*EGLRRPKGQRP Trigger: CGGGCGCTGCCCTTTTGGGCGTCGCAGACCCTCCAACCCCGGCGGCGGCCTTAAGATTCCCGGGCTGGGATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000367728.1 ENST00000478184.1 |
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| CDS CCA 72 bp | CAGCCAAGTTCCCGAGAGTTCCTAGGGTTGCGCAGCTaGGGGACGGCGGCACCCAGCCTTTTTCCCGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: QPSSREFLGLRS*GTAAPSLFPAS Trigger: CGAAGCGGGAAAAAGGCTGGGTGCCGCCGTCCCCCAGCTGCGCAACCCTAGGAACTCTCGGGAACTTGGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000344529.5 |
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| CDS CCA 72 bp | AACCCACCTACCCGAGAGTTCCTAGGGTTGCGCAGCTaGGGGACGGCGGCACCCAGCCTTTTTCCCGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: NPPTREFLGLRS*GTAAPSLFPAS Trigger: CGAAGCGGGAAAAAGGCTGGGTGCCGCCGTCCCCCAGCTGCGCAACCCTAGGAACTCTCGGGTAGGTGGGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CCA 72 bp | TCCAGGTTGATCCGAGAGTTCCTAGGGTTGCGCAGCTaGGGGACGGCGGCACCCAGCCTTTTTCCCGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SRLIREFLGLRS*GTAAPSLFPAS Trigger: CGAAGCGGGAAAAAGGCTGGGTGCCGCCGTCCCCCAGCTGCGCAACCCTAGGAACTCTCGGATCAACCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS CAA 90 bp | ACACTGACCGTTACACGGAACCCACCTACCCGAGAGTTCCTAGGGTaGCGCAGCTGGGGGACGGCGGCACCCAGCCTTTTTCCCGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: TLTVTRNPPTREFLG*RSWGTAAPSLFPAS Trigger: CGAAGCGGGAAAAAGGCTGGGTGCCGCCGTCCCCCAGCTGCGCAACCCTAGGAACTCTCGGGTAGGTGGGTTCCGTGTAACGGTCAGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 72 bp | GTTACACGGAACCCACCTACCCGAGAGTTCCTAGGGTaGCGCAGCTGGGGGACGGCGGCACCCAGCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VTRNPPTREFLG*RSWGTAAPSLF Trigger: AAAAAGGCTGGGTGCCGCCGTCCCCCAGCTGCGCAACCCTAGGAACTCTCGGGTAGGTGGGTTCCGTGTAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 72 bp | AGGACAACACAGCCAAGTTCCCGAGAGTTCCTAGGGTaGCGCAGCTGGGGGACGGCGGCACCCAGCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: RTTQPSSREFLG*RSWGTAAPSLF Trigger: AAAAAGGCTGGGTGCCGCCGTCCCCCAGCTGCGCAACCCTAGGAACTCTCGGGAACTTGGCTGTGTTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344529.5 |
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| CDS CAA 72 bp | AGGAAGGCATCCAGGTTGATCCGAGAGTTCCTAGGGTaGCGCAGCTGGGGGACGGCGGCACCCAGCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: RKASRLIREFLG*RSWGTAAPSLF Trigger: AAAAAGGCTGGGTGCCGCCGTCCCCCAGCTGCGCAACCCTAGGAACTCTCGGATCAACCTGGATGCCTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS GCA 72 bp | AATATTGCTTGGCAAGCCAGACACCGTTACCCCCTCTaGAGCAGGGATCCCAGCCCGGGAATCTTAAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: NIAWQARHRYPL*SRDPSPGILRP Trigger: CGGCCTTAAGATTCCCGGGCTGGGATCCCTGCTGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS TCA 72 bp | CCTTACACAAACATCTCCATCCTGCCACGGTTCGGATaGCTGGCAGTCTGTTTAGGCGAGGCCCAGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: PYTNISILPRFG*LAVCLGEAQKQ Trigger: CTGTTTCTGGGCCTCGCCTAAACAGACTGCCAGTCATCCGAACCGTGGCAGGATGGAGATGTTTGTGTAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS CAA 90 bp | TTGCCCGACTTTATTTCTTCCATGATAGACCACAACAAATATTGCTaGGCAAGCCAGACACCGTTACCCCCTCTGCAGCAGGGATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPDFISSMIDHNKYC*ASQTPLPPLQQGSQ Trigger: CTGGGATCCCTGCTGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATTTGTTGTGGTCTATCATGGAAGAAATAAAGTCGGGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 90 bp | CATATTGCCCGACTTTATTTCTTCCATGATAGACCACAACAAATATaGCTTGGCAAGCCAGACACCGTTACCCCCTCTGCAGCAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: HIARLYFFHDRPQQI*LGKPDTVTPSAAGI Trigger: GATCCCTGCTGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATTTGTTGTGGTCTATCATGGAAGAAATAAAGTCGGGCAATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 90 bp | GTCAGAATCTGGGAGCTTTGCAGATGCGTCAAGGTAGCCTTCAGATaGCCTCTCTGTTTTCAATGTGTCCCCTATCTCACTCTTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VRIWELCRCVKVAFR*PLCFQCVPYLTLPN Trigger: GTTTGGAAGAGTGAGATAGGGGACACATTGAAAACAGAGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS GCA 72 bp | AAAGCAAGTCTTGTGAAAGTCAGAATCTGGGAGCTTTaGAGATGCGTCAAGGTAGCCTTCAGATTGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: KASLVKVRIWEL*RCVKVAFRLPL Trigger: GAGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGACTTTCACAAGACTTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS CAA 72 bp | GAAAGCAAGTCTTGTGAAAGTCAGAATCTGGGAGCTTaGCAGATGCGTCAAGGTAGCCTTCAGATTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ESKSCESQNLGA*QMRQGSLQIAS Trigger: AGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGACTTTCACAAGACTTGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS CAA 90 bp | CCAGAAACAGAAAGCAAGTCTTGTGAAAGTCAGAATCTGGGAGCTTaGCAGATGCGTCAAGGTAGCCTTCAGATTGCCTCTCTGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PETESKSCESQNLGA*QMRQGSLQIASLFS Trigger: TGAAAACAGAGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGACTTTCACAAGACTTGCTTTCTGTTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS GCA 72 bp | GACTTTATTTCTTCCATGATAGACCACAACAAATATTaGTTGGCAAGCCAGACACCGTTACCCCCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: DFISSMIDHNKY*LASQTPLPPLQ Trigger: CTGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATTTGTTGTGGTCTATCATGGAAGAAATAAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS GCA 72 bp | AGTCTTGTGAAAGTCAGAATCTGGGAGCTTTGCAGATaGGTCAAGGTAGCCTTCAGATTGCCTCTCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SLVKVRIWELCR*VKVAFRLPLCF Trigger: AAAACAGAGAGGCAATCTGAAGGCTACCTTGACGCATCTGCAAAGCTCCCAGATTCTGACTTTCACAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS CAA 72 bp | TTTATTTCTTCCATGATAGACCACAACAAATATTGCTaGGCAAGCCAGACACCGTTACCCCCTCTGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FISSMIDHNKYC*ASQTPLPPLQQ Trigger: CTGCTGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATTTGTTGTGGTCTATCATGGAAGAAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 72 bp | CGACTTTATTTCTTCCATGATAGACCACAACAAATATaGCTTGGCAAGCCAGACACCGTTACCCCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RLYFFHDRPQQI*LGKPDTVTPSA Trigger: TGCAGAGGGGGTAACGGTGTCTGGCTTGCCAAGCAATATTTGTTGTGGTCTATCATGGAAGAAATAAAGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 90 bp | GCCAGGATTCAAACCAAAGTCTTATCCCAAAGCCTGTGTCTCACATaGTATCTCCCTCTAAAGCAGTTCTTAACTCAGTGGTTCACATAT | + |
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Preference number: 6 (lower is better) Translates to: ARIQTKVLSQSLCLT*YLPLKQFLTQWFTY Trigger: ATATGTGAACCACTGAGTTAAGAACTGCTTTAGAGGGAGATACAATGTGAGACACAGGCTTTGGGATAAGACTTTGGTTTGAATCCTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS TCA 72 bp | GACAACACAGCCAAGTTCCTAGAAAAAGAGAGACTGTaGACCTACGAAAGTTGTGAAAGGTCAAGAGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: DNTAKFLEKERL*TYESCERSRVV Trigger: TACTACTCTTGACCTTTCACAACTTTCGTAGGTTCACAGTCTCTCTTTTTCTAGGAACTTGGCTGTGTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS GCA 72 bp | ATCAGGTATGAAGGTCAGGCAGAAAGAAAATGTTGGTaGTACACAACTCATCTCTCAGTCTTCAAATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: IRYEGQAERKCW*YTTHLSVFKFL Trigger: GAGGAATTTGAAGACTGAGAGATGAGTTGTGTAGCACCAACATTTTCTTTCTGCCTGACCTTCATACCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000475059.5 ENST00000484368.1 ENST00000489002.5 |
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| CDS CAA 72 bp | ATTAGTTTGGTGGTTTCCTTCTTGAGTCTTGCAAACTaGAGTCTACCTTACACAAACATCTCCATCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: ISLVVSFLSLAN*SLPYTNISILP Trigger: TGGCAGGATGGAGATGTTTGTGTAAGGTAGACTCAAGTTTGCAAGACTCAAGAAGGAAACCACCAAACTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS TCA 72 bp | CTGTTACTGTCACCAGTACTTTTAATTCATCAGGTATaGAGGTCAGGCAGAAAGAAAATGTTGGTGCTACAC | + |
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Preference number: 6 (lower is better) Translates to: LLLSPVLLIHQV*RSGRKKMLVLH Trigger: GTGTAGCACCAACATTTTCTTTCTGCCTGACCTTCATACCTGATGAATTAAAAGTACTGGTGACAGTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475059.5 |
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| CDS CCA 72 bp | TTCATCAGGTATGAAGGTCAGGCAGAAAGAAAATGTTaGTGCTACACAACTCATCTCTCAGTCTTCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: FIRYEGQAERKC*CYTTHLSVFKF Trigger: GAATTTGAAGACTGAGAGATGAGTTGTGTAGCACCAACATTTTCTTTCTGCCTGACCTTCATACCTGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000475059.5 ENST00000484368.1 ENST00000489002.5 |
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| CDS CCA 72 bp | ACATTGTATCTCCCTCTAAAGCAGTTCTTAACTCAGTaGTTCACATATCCCTTAGGTATATCACATTGCATG | + |
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Preference number: 6 (lower is better) Translates to: TLYLPLKQFLTQ*FTYPLGISHCM Trigger: CATGCAATGTGATATACCTAAGGGATATGTGAACCACTGAGTTAAGAACTGCTTTAGAGGGAGATACAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CCA 72 bp | TGGCTACTAGAAATGTGGCTTGCATTATACTTCAATTaGACAGTGCTGGATTTTATTTCTTTGGGACACCAA | + |
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Preference number: 6 (lower is better) Translates to: WLLEMWLALYFN*TVLDFISLGHQ Trigger: TTGGTGTCCCAAAGAAATAAAATCCAGCACTGTCCAATTGAAGTATAATGCAAGCCACATTTCTAGTAGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489002.5 |
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| CDS CAA 72 bp | ATGGCTACTAGAAATGTGGCTTGCATTATACTTCAATaGGACAGTGCTGGATTTTATTTCTTTGGGACACCA | + |
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Preference number: 6 (lower is better) Translates to: MATRNVACIILQ*DSAGFYFFGTP Trigger: TGGTGTCCCAAAGAAATAAAATCCAGCACTGTCCAATTGAAGTATAATGCAAGCCACATTTCTAGTAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489002.5 |
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| CDS TCA 72 bp | CCTAGAAAAAGAGAGACTGTGAACCTACGAAAGTTGTaGAAGGTCAAGAGTAGTACTGAGATAAAGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PRKRETVNLRKL*KVKSSTEIKSN Trigger: ATTTGACTTTATCTCAGTACTACTCTTGACCTTTCACAACTTTCGTAGGTTCACAGTCTCTCTTTTTCTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367728.1 |
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| CDS CAA 90 bp | CAATCTGGTTTAAGTGAAAGTAAAATTAGTTTGGTGGTTTCCTTCTaGAGTCTTGCAAACTTGAGTCTACCTTACACAAACATCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: QSGLSESKISLVVSF*SLANLSLPYTNISI Trigger: GATGGAGATGTTTGTGTAAGGTAGACTCAAGTTTGCAAGACTCAAGAAGGAAACCACCAAACTAATTTTACTTTCACTTAAACCAGATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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| CDS CAA 72 bp | TTAAGTGAAAGTAAAATTAGTTTGGTGGTTTCCTTCTaGAGTCTTGCAAACTTGAGTCTACCTTACACAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSESKISLVVSF*SLANLSLPYTN Trigger: GTTTGTGTAAGGTAGACTCAAGTTTGCAAGACTCAAGAAGGAAACCACCAAACTAATTTTACTTTCACTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484368.1 |
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